BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00012834
         (1552 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AJE29370.1| putative gag protein [Coffea canephora]                188   1e-44
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   178   9e-42
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo...   163   4e-37
gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryz...   156   4e-35
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]   155   6e-35
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc...   154   2e-34
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc...   153   4e-34
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]   153   4e-34
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   152   9e-34
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]   150   3e-33
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc...   149   6e-33
dbj|BAQ19356.1| putative gag-pol polyprotein [Torenia fournieri]      147   2e-32
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    146   4e-32
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]   145   8e-32
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        142   9e-31
emb|CDP17738.1| unnamed protein product [Coffea canephora]            140   4e-30
gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposo...   138   1e-29
gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposo...   137   2e-29
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           137   2e-29
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   137   3e-29

>gb|AJE29370.1| putative gag protein [Coffea canephora]
          Length = 433

 Score =  188 bits (477), Expect = 1e-44
 Identities = 128/341 (37%), Positives = 187/341 (54%), Gaps = 14/341 (4%)
 Frame = -2

Query: 1551 MDLKVTSMIQLCLADEVMYNFMDE-ESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMK 1375
            +D +  S I+L +AD ++ N +DE +S   LW KLE LY+  S SNKL+ K+  Y L+M 
Sbjct: 57   LDARCASTIRLYVADNIINNVIDEKDSAADLWKKLEKLYLAKSLSNKLHLKRQFYALKMV 116

Query: 1374 EGITVLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILE 1195
            EG +++++ N FN I+ +L  V V I+EE+K L+L + +  SYE +VTT+LYGK+TL  E
Sbjct: 117  EGGSLMDHMNTFNGILDQLQKVGVDIEEENKALLLLTPVSDSYESVVTTLLYGKDTLEFE 176

Query: 1194 EVMSTLLFNEIMKMPNQ-VEQKGSCLMVMEXXXXXXXXGPN*LN----------KCYFCH 1048
             V S+LL +E  +  NQ V Q+ + +   E        G +             +C+ CH
Sbjct: 177  NVQSSLLDHEKQRKANQDVTQEAALIARGENKRGKQFGGESKAGGSKAKRKGGIQCFGCH 236

Query: 1047 KEGYWKNDCKHRQKWLKKKRQDAVADKAMSGIYTEVLMVSY-DNTS*DKCWIFDSGSMVH 871
            + G+ K  C H QK   +   D VA  A  G   ++L +S  +NTS    WI DSG + H
Sbjct: 237  EFGHIKRYCPH-QKKNDENDYDGVAGYASGG---DILTISKGNNTSSRDGWILDSGCVSH 292

Query: 870  VCSNKDKFDSVV-KEERIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQYVLEACYNL 694
            VCS  D FD++  K+   +   DGS C+V G G VKIK  +G +R+L  V YV +   NL
Sbjct: 293  VCSRLDYFDTLQRKKAGFMCLGDGSTCQVKGVGVVKIKMLNGEIRSLGGVAYVPKLRRNL 352

Query: 693  ISIRVLDEERCQIQMQQGVVIVNQENKVILKEEKCEGVYKL 571
            IS+  LD E        GV+ +     V+L  +K   +Y L
Sbjct: 353  ISLNQLDSEGYHFSAASGVLKITYGETVLLMGKKYGNLYHL 393


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  178 bits (452), Expect = 9e-42
 Identities = 109/330 (33%), Positives = 177/330 (53%), Gaps = 13/330 (3%)
 Frame = -2

Query: 1551 MDLKVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKE 1372
            ++ K  S I LCLAD+V+    DEE+  GLW KLE+LYM  S +NKL  K+ L+GLRM E
Sbjct: 52   LEEKAHSTIMLCLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAE 111

Query: 1371 GITVLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEE 1192
            G  + E+    N ++ +L  +DVKI++ED  LIL   LP S+E  V + + GK+T+ LEE
Sbjct: 112  GTQLREHLEQLNTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEE 171

Query: 1191 VMSTLLFNEIMKMPNQV------------EQKGSCLMVMEXXXXXXXXGPN*LNKCYFCH 1048
            V S L   E+    N               +KG      +         P+  + C +C 
Sbjct: 172  VRSALHSRELRHKANGTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKGAKPD--DVCNYCK 229

Query: 1047 KEGYWKNDCKHRQKWLKKKRQDAVADKAMSGIYTEVLMVSYDNTS*DKCWIFDSGSMVHV 868
            ++G+WK DC  ++K  +K+   A   +  +    ++ +V+ ++T     W+ DSG+  H+
Sbjct: 230  EKGHWKFDCPKKKKQSEKQSVSAAVAEEDTNSEEDIALVADEHTHHSDVWVLDSGASYHI 289

Query: 867  CSNKDKFDSVVK-EERIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQYVLEACYNLI 691
            C  ++ F +  + +   +   + S CKV+GTG++KI+  DG+   L  V++V     NLI
Sbjct: 290  CPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLI 349

Query: 690  SIRVLDEERCQIQMQQGVVIVNQENKVILK 601
            S+ +LD +      + GV+ V + + +ILK
Sbjct: 350  SLSLLDSKGFSWSGKDGVLRVWKGSNLILK 379


>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 337

 Score =  163 bits (412), Expect = 4e-37
 Identities = 101/280 (36%), Positives = 151/280 (53%), Gaps = 12/280 (4%)
 Frame = -2

Query: 1542 KVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKEGIT 1363
            K  S I L L DEV+    +E+S  G+W KLE+LYM  S +NKLY KK L+ L+M+EG +
Sbjct: 57   KAHSTIILSLGDEVLREVAEEKSAAGIWLKLESLYMTKSLTNKLYLKKRLHQLKMEEGSS 116

Query: 1362 VLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEEVMS 1183
            + E+ + F K +  L +VDV+IDEED+ ++L   LP S+E +V T+L+G++TL LEEV +
Sbjct: 117  IKEHVSLFTKAVLDLKSVDVRIDEEDQAVMLLCSLPSSFENLVDTMLFGRDTLTLEEVKA 176

Query: 1182 TLLFNEIMKMPNQVEQKGSCLMVMEXXXXXXXXGPN*LNK----------CYFCHKEGYW 1033
            TL   E+ K   + + +G     +              NK          CY+C KEG++
Sbjct: 177  TLNSRELKKKITENKGEGGDPEALMARGRLEKRDSKSKNKRRSKYKNEKACYYCKKEGHF 236

Query: 1032 KNDCKHRQKWLKKKRQDAVADKAMSGIYTEVLMVSYDNTS*DKCWIFDSGSMVHVCSNKD 853
            + +C  R+K    K  D      ++  Y    ++S       + WI DSG   H+  N +
Sbjct: 237  RKECPERKKKNNGKYNDESDIAVVADGYESAEVLSISTKKHSEEWILDSGCSFHMTPNLE 296

Query: 852  KFDSVVKEERIVKTVDGS--ACKVIGTGTVKIKGKDGTVR 739
             F S  KE    K + G+   C VIG GT+K+K +DG V+
Sbjct: 297  WFSS-YKEIDGGKVLMGNNMVCNVIGIGTIKLKVQDGFVK 335


>gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryza sativa Japonica
            Group] gi|108706491|gb|ABF94286.1| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 556

 Score =  156 bits (395), Expect = 4e-35
 Identities = 108/342 (31%), Positives = 185/342 (54%), Gaps = 14/342 (4%)
 Frame = -2

Query: 1551 MDLKVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKE 1372
            M  + T++I+L L+D VMY  MDE++   +W KL +LYM  S ++KLY K+ LYGL+M+E
Sbjct: 187  MKAQATAIIRLSLSDFVMYQVMDEKTPKEIWDKLASLYMSKSLTSKLYLKQQLYGLQMQE 246

Query: 1371 GITVLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEE 1192
               + ++ + FN+++  L  +DVK+D+EDK +IL   LP S+E++VTT+ +GK+T+  EE
Sbjct: 247  ESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPPSFEHVVTTLTHGKDTVKTEE 306

Query: 1191 VMSTLLFNEIMKMPN----QVEQKGSCLMVMEXXXXXXXXGPN*LN-KCYFCHKEGYWKN 1027
            ++S+LL  ++ +       +  Q  S L+  +               +CY CH+ G+ + 
Sbjct: 307  IISSLLARDLRRSKKNEAMEASQAESLLVKAKHDHEAGVSKSKEKGARCYKCHEFGHIRR 366

Query: 1026 DCKHRQKWLKKKRQDAVADKAMSGIYT-----EVLMVSYDNTS*DKCWIFDSGSMVHVCS 862
            +C      L KKR+  +A  A  G  +     E+L VS + +   + W+ DS S  HV S
Sbjct: 367  NCP-----LLKKRKGGIASLAARGDNSDSSSHEILTVSNEKSG--EAWMLDSASSYHVTS 419

Query: 861  NKDKFDSVVKEE-RIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQYVLEACYNLISI 685
              + F S    +  +V   + ++ +VIG G +K K  DG    L  V++V     +LIS+
Sbjct: 420  KWEWFSSYKSGDFGVVYLGNDTSYRVIGVGDIKFKMYDGNEVLLSDVRHVPGLRKSLISL 479

Query: 684  RVLDEE--RCQIQMQQGVVIVNQENKVILKEEKCEG-VYKLK 568
              L E     Q+   +  + + ++ K ++  E+    +YKL+
Sbjct: 480  GSLHETGWLYQVDSDRKTMNIMKDGKTVMTGERTSSCLYKLQ 521


>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score =  155 bits (393), Expect = 6e-35
 Identities = 112/342 (32%), Positives = 169/342 (49%), Gaps = 20/342 (5%)
 Frame = -2

Query: 1542 KVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKEGIT 1363
            K    I LCL ++V+    +E+    LW KLE+L+M  S  N+LY KK L+ L+MKE ++
Sbjct: 12   KAHRAILLCLGNKVLREIAEEDITAKLWLKLESLHMTKSLKNRLYLKKRLHTLQMKESMS 71

Query: 1362 VLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEEVMS 1183
            + ++ N FNK I  L  +DVK++ ED+ + L   LP SYE+ V  ++YG+ TL +++V  
Sbjct: 72   IKDHFNEFNKTIXDLRNIDVKVNYEDQAIFLMCSLPNSYEHFVDIMMYGRGTLFIKDVRV 131

Query: 1182 TLLFNEIMKMPNQVEQ---------KGSCLMVMEXXXXXXXXGPN*LNKCYFCHKEG-YW 1033
             L   E+ KM  +  +         +G                    NKC+ C KEG Y 
Sbjct: 132  ALNSRELKKMVFKSRKYDSGEGLVARGRTRKKNNGRRGRSRSKSRGNNKCFKCKKEGHYV 191

Query: 1032 KN--DCKHRQKWLKKKRQDAVADKAMSGIYTEVLMVSYDNTS*DKCWIFDSGSMVHVCSN 859
            KN  D K ++        DA   K  S   T+VL+V   N+  D  WI DSG   H+  N
Sbjct: 192  KNXPDRKGKENKRNYNSGDATFAKENSNT-TDVLLVXVTNS--DDEWILDSGCSYHMSPN 248

Query: 858  KDKFDSVVKEERIVKTVDGS--------ACKVIGTGTVKIKGKDGTVRAL*AVQYVLEAC 703
             D F +        + +DG         ACKV+G   ++IK   G +R L  V++V +  
Sbjct: 249  GDWFST-------YQPIDGGKVLMGNKVACKVVGIHXIQIKMHGGIIRTLTNVRHVPKLN 301

Query: 702  YNLISIRVLDEERCQIQMQQGVVIVNQENKVILKEEKCEGVY 577
             NLI +R LD   C  +   GV+ V++   V++  +K  G+Y
Sbjct: 302  KNLIFLRTLDSNGCIYKAGGGVLRVSKGGLVVMNGKKINGLY 343


>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 424

 Score =  154 bits (389), Expect = 2e-34
 Identities = 109/342 (31%), Positives = 183/342 (53%), Gaps = 14/342 (4%)
 Frame = -2

Query: 1551 MDLKVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKE 1372
            M  +  + I+L L+D VMY  MDE++   +W KL +LYM  S ++KLY K+ LYGL+M+E
Sbjct: 56   MKAQAAATIRLSLSDSVMYQVMDEKTSKEIWVKLTSLYMSKSLTSKLYLKQQLYGLQMQE 115

Query: 1371 GITVLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEE 1192
               + ++ + FN+++  L  +DVK+D+EDK +IL   LP SYE++VT + +GK+T I  E
Sbjct: 116  ESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPPSYEHVVTILTHGKDT-IKTE 174

Query: 1191 VMSTLLFNEIMKMPN----QVEQKGSCLMVMEXXXXXXXXGPN*LN-KCYFCHKEGYWKN 1027
            ++S+LL  ++ +       +  Q  S L+  +               +CY CH+ G+ + 
Sbjct: 175  IISSLLARDLRRSKKNEAMEASQAESLLVKAKHDHEAGVSKSKEKGARCYKCHEFGHIRR 234

Query: 1026 DCKHRQKWLKKKRQDAVADKAMSGIYT-----EVLMVSYDNTS*DKCWIFDSGSMVHVCS 862
            +C      L KKR+D +A  A  G  +     E+L VS + +   + W+ DS S  HV S
Sbjct: 235  NCP-----LLKKRKDGIASLAARGDDSDSSSHEILTVSNEKSG--EAWMLDSASSYHVTS 287

Query: 861  NKDKFDSVVKEE-RIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQYVLEACYNLISI 685
             ++ F S    +  +V   D ++ +V+G G VK K  DG    L  V++V     +LIS+
Sbjct: 288  KREWFSSYKSGDFGVVYLGDDTSYRVVGVGDVKFKMYDGNEVLLSDVRHVPGLRKSLISL 347

Query: 684  RVLDE--ERCQIQMQQGVVIVNQENKVILKEEKCEG-VYKLK 568
              L E     Q+   +  + + ++ K ++  E+    +YKL+
Sbjct: 348  GSLHEIGWLYQVDSDRKTMNIMKDGKTVMTGERTSSCLYKLQ 389


>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 425

 Score =  153 bits (386), Expect = 4e-34
 Identities = 114/385 (29%), Positives = 195/385 (50%), Gaps = 14/385 (3%)
 Frame = -2

Query: 1551 MDLKVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKE 1372
            M  +  + I+L L+D VMY  MDE++   +W KL +LYM  S ++KLY K+ LYGL+M+E
Sbjct: 56   MKAQAAATIRLSLSDSVMYPVMDEKTPKEIWDKLASLYMSKSLTSKLYLKQQLYGLQMQE 115

Query: 1371 GITVLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEE 1192
               + ++ + FN+++  L  +DVK+D+ED  +IL   LP SYE++VTT+++GK+T+  EE
Sbjct: 116  ESDLRKHVDVFNQLVVDLSKLDVKLDDEDMAIILLCSLPPSYEHVVTTLMHGKDTVKTEE 175

Query: 1191 VMSTLLFNEIMKMPN----QVEQKGSCLMVMEXXXXXXXXGPN*LN-KCYFCHKEGYWKN 1027
             +S+LL  ++ +       +  Q  S L+  +               +CY CH+ G+ + 
Sbjct: 176  KISSLLARDLRRSNKNEAMEASQAESLLVKAKHDHEAGVSKSKDKGARCYKCHEFGHIRR 235

Query: 1026 DCKHRQKWLKKKRQDAVADKAMSGIYT-----EVLMVSYDNTS*DKCWIFDSGSMVHVCS 862
            +C      L KKR+  +A  A  G  +     E L VS + +   + W+ DS S  HV S
Sbjct: 236  NCP-----LLKKRKGGIASLAARGDDSDSSSHETLTVSNEKSG--EAWMLDSASSYHVTS 288

Query: 861  NKDKFDSVVKEE-RIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQYVLEACYNLISI 685
             ++ F S    +  +V   D ++ +V+G G VK +  DG    L  V+++     +LIS+
Sbjct: 289  KREWFSSYKSGDFGVVYLGDDTSYRVVGVGDVKFEMYDGNEVLLSDVRHMPGLRKSLISL 348

Query: 684  RVLDEER--CQIQMQQGVVIVNQENKVILKEEKCEG-VYKLK*EKLVQGEVLRINLKGSS 514
              L E     Q+   +  + + ++ K ++  E+    +YK               L+GS+
Sbjct: 349  GSLHETSWLYQVDFDRKTMNIMKDGKTVMTGERTSSCLYK---------------LQGSA 393

Query: 513  LWRNQMWPEYQGLAVMQVRPWEEGI 439
            +    M   + G+AV      E G+
Sbjct: 394  VAGGVMEDRHAGVAVHDPEGGEPGV 418


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score =  153 bits (386), Expect = 4e-34
 Identities = 107/342 (31%), Positives = 172/342 (50%), Gaps = 21/342 (6%)
 Frame = -2

Query: 1533 SMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKEGITVLE 1354
            S I L LADEV+    DE + +GLW K E+ Y   S +N+LY K+ L+ L+M EG+ V +
Sbjct: 61   SAILLSLADEVLREVADETTAVGLWRKFESKYQKKSLTNRLYQKRQLHTLKMSEGMQVRD 120

Query: 1353 YPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEEVMSTLL 1174
            + N FN+II  L  V VK++EED+ +IL   LP SYE  V T++YG++++   +V   L 
Sbjct: 121  HLNNFNRIILDLNGVGVKVEEEDQAMILLCSLPSSYENFVDTMMYGRBSISXNDVKDALQ 180

Query: 1173 FNEIMKMPNQVEQ----------KGSCLMVMEXXXXXXXXGPN*LNKCYFCHKEGYWKND 1024
              E+ K+ +  E+          +G  +                  +C+   ++G+++ +
Sbjct: 181  SKELQKLVSGSEEGSVETGLTVSRGRSMERNGGGRSKSXSKSKAAMRCFHXKEKGHFRKN 240

Query: 1023 CKHRQKWL-----------KKKRQDAVADKAMSGIYTEVLMVSYDNTS*DKCWIFDSGSM 877
            C  RQK +             ++     D +  G   +VL VS  +++  + WI D+G+ 
Sbjct: 241  CPQRQKGIGXGSNGNAQVVVAQKDSEKQDSSDEGEGGDVLTVSTSSSA--ESWILDTGAS 298

Query: 876  VHVCSNKDKFDSVVKEERIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQYVLEACYN 697
             H+  ++D F +  +    VK  D     V G+G+V+IK  DG VR L A  YV     N
Sbjct: 299  YHMAYSRDLFTTFKEWNGSVKLGDDGELGVKGSGSVQIKMYDGLVRTLNA-WYVPGLRKN 357

Query: 696  LISIRVLDEERCQIQMQQGVVIVNQENKVILKEEKCEGVYKL 571
            LIS+  LD+         GV+ V++   V++K     G+Y L
Sbjct: 358  LISVGTLDKNGYTFSGSGGVLRVSKGALVVMKGRLQHGIYTL 399


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease [Nicotiana tabacum]
            gi|20045|emb|CAA32025.1| unnamed protein product
            [Nicotiana tabacum]
          Length = 1328

 Score =  152 bits (383), Expect = 9e-34
 Identities = 103/321 (32%), Positives = 162/321 (50%), Gaps = 26/321 (8%)
 Frame = -2

Query: 1551 MDLKVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKE 1372
            +D +  S I+L L+D+V+ N +DE++  G+W++LE+LYM  + +NKLY KK LY L M E
Sbjct: 55   LDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSE 114

Query: 1371 GITVLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEE 1192
            G   L + N FN +I++L  + VKI+EEDK ++L + LP SY+ + TTIL+GK T+ L++
Sbjct: 115  GTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKD 174

Query: 1191 VMSTLLFNEIMKMPNQVEQKGSCLMVMEXXXXXXXXGPN----------------*LNKC 1060
            V S LL NE  KM  + E +G  L+             N                 +  C
Sbjct: 175  VTSALLLNE--KMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNC 232

Query: 1059 YFCHKEGYWKNDCKHRQKWLKKKRQDAVADKAMSGIYTEVLMVSYDNTS*DKC------- 901
            Y C++ G++K DC + +K   +       D   + +     +V + N   ++C       
Sbjct: 233  YNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEE-EECMHLSGPE 291

Query: 900  --WIFDSGSMVHVCSNKDKFDSVVKEE-RIVKTVDGSACKVIGTGTVKIKGKDGTVRAL* 730
              W+ D+ +  H    +D F   V  +   VK  + S  K+ G G + IK   G    L 
Sbjct: 292  SEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLK 351

Query: 729  AVQYVLEACYNLISIRVLDEE 667
             V++V +   NLIS   LD +
Sbjct: 352  DVRHVPDLRMNLISGIALDRD 372


>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
          Length = 947

 Score =  150 bits (378), Expect = 3e-33
 Identities = 105/362 (29%), Positives = 173/362 (47%), Gaps = 13/362 (3%)
 Frame = -2

Query: 1542 KVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKEGIT 1363
            K  S I L L D ++      +    LW KLE+LYM  S +N+L+ K  LY  ++  G++
Sbjct: 102  KAQSAIILSLGDTMLREVAKAKPTAELWLKLESLYMTKSLANRLHKKIKLYTFKITPGMS 161

Query: 1362 VLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEEVMS 1183
            + E+ + FNKII  L  +D+ +  EDK ++L + L  SY  +   I+YG++++  +EV S
Sbjct: 162  IEEHFDHFNKIILDLENIDITVSNEDKAILLLTSLDASYTNMKEAIMYGRDSMTFDEVQS 221

Query: 1182 TLLFNEIMKMPNQVEQKGSCLMVMEXXXXXXXXGPN*LN---------KCYFCHKEGYWK 1030
             L   E+ K     ++ G  L +            N            KC+ CHKEG++K
Sbjct: 222  ILHPRELQKQEESKDESGEGLNIRGRYDKREKKCKNLKAKSKSNTKKFKCFICHKEGHFK 281

Query: 1029 NDCK-HRQKWLKKKRQDAVADKAMSGIYTEVLMVSYDNTS*DKCWIFDSGSMVHVCSNKD 853
             DC   RQ  +KK   +  A   + G Y    +++       K WI DSG   H+C  K 
Sbjct: 282  KDCSDKRQNTIKKTVNEGDAAVILDG-YDSAKVLNVAEMDSGKEWILDSGCSFHMCPIKA 340

Query: 852  KFDSVVKEE-RIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQYVLEACYNLISIRVL 676
             F+   +     V   +   CK++GT  V+IK  DG  R L  V+Y+ E   NLIS+ +L
Sbjct: 341  WFEDFKEANGGHVLLGNNKHCKILGTSIVRIKHYDGIERVLEVVRYIPELKRNLISLGML 400

Query: 675  DEERCQIQMQQGVVIVNQENKVILKEEKCEGVYKLK*EKLV--QGEVLRINLKGSSLWRN 502
            D+     + +   + V + +  ++K     G+Y L  + +      VL+ ++  + LW  
Sbjct: 401  DKLGYTFKSKPNSLRVARGSLTVMKGTIKNGLYTLIGQTMTGKVSIVLKEDMGITKLWHQ 460

Query: 501  QM 496
            ++
Sbjct: 461  RL 462


>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 415

 Score =  149 bits (376), Expect = 6e-33
 Identities = 93/275 (33%), Positives = 154/275 (56%), Gaps = 11/275 (4%)
 Frame = -2

Query: 1551 MDLKVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKE 1372
            M  +  + I+L L+D VMY  MDE+S   +W KL +L+M  S ++KLY K+ LYGL+++E
Sbjct: 56   MKAQAAATIRLSLSDSVMYQVMDEKSPKEIWDKLASLHMSKSLTSKLYLKQQLYGLQVQE 115

Query: 1371 GITVLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEE 1192
               + ++ + FN+++  L  +DVK+D+EDK +IL   LP SYE++VTT+ +GK+T+  EE
Sbjct: 116  ESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPLSYEHVVTTLTHGKDTVKTEE 175

Query: 1191 VMSTLLFNEIMKMPNQVEQK---GSCLMVMEXXXXXXXXGPN*LN--KCYFCHKEGYWKN 1027
            ++S+LL  ++ +       K   G  L+V +          +     +CY CH+ G+ + 
Sbjct: 176  IISSLLARDLRRSKKNEATKASQGKSLLVKDKHDHEAGVSKSKEKGARCYKCHEFGHIRR 235

Query: 1026 DCKHRQKWLKKKRQDAVADKAMSGIYT-----EVLMVSYDNTS*DKCWIFDSGSMVHVCS 862
            +C      L KKR+  +A  A  G  +     E+L VS + +   + W+ DS S  HV S
Sbjct: 236  NCP-----LLKKRKGGIASLAARGDDSDSGSHEILTVSDEMSG--EAWMLDSASSYHVTS 288

Query: 861  NKDKFDSVVKEE-RIVKTVDGSACKVIGTGTVKIK 760
             ++ F S    +  +V   DG++ +V+G G V  K
Sbjct: 289  KREWFSSYKSGDFGVVYLGDGTSYRVVGVGDVNFK 323


>dbj|BAQ19356.1| putative gag-pol polyprotein [Torenia fournieri]
          Length = 605

 Score =  147 bits (371), Expect = 2e-32
 Identities = 110/335 (32%), Positives = 172/335 (51%), Gaps = 19/335 (5%)
 Frame = -2

Query: 1551 MDLKVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKE 1372
            +D K  S+I L L D V+     E + +GLW KLE LYM  S +N+LY K+ LY  +M E
Sbjct: 73   LDSKAHSVIILSLGDRVLRQVSHESTALGLWKKLEELYMTKSLANRLYLKQALYSFKMIE 132

Query: 1371 GITVLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEE 1192
               + E  + F K+I  L  ++VKI++ED+ L+L   LP+SY     T+LYG+ETL L+E
Sbjct: 133  EKAIDEQMDQFIKLILDLENIEVKIEDEDQALLLVCALPRSYNTFKDTLLYGRETLTLKE 192

Query: 1191 VMSTLLFNEI-MKMPNQVEQKGSCLMVMEXXXXXXXXGPN*LN------KCYFCHKEGYW 1033
            V + L   ++  ++ N+     S  + ++             N      KC++C +EG+ 
Sbjct: 193  VQAALKSKQLNTRIDNKAVGSTSEALYVKGKGEEKKTHKERKNKSKKKVKCFYCDEEGHM 252

Query: 1032 KNDC--KHRQKWLKKKRQDAVADKAMSGIYTEVLMVSYDNTS*DKC-----WIFDSGSMV 874
              +C  K R K  KK  Q   A    S    +VL V++++    K      W+ DS S  
Sbjct: 253  CKNCPKKERDKG-KKVEQGEAAMACESYESADVLAVTHEDQDVTKSEKSGKWLLDSASSF 311

Query: 873  HVCSNKDKFDSVVKEER-----IVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQYVLE 709
            HV   K    S +K+ +     +V   +    K++G GTVKI+ K G VR L  V+++ +
Sbjct: 312  HVTCVK----SWIKDFKGCDGCLVSVGEEKQYKILGFGTVKIRLKTGGVRILRNVKFIPD 367

Query: 708  ACYNLISIRVLDEERCQIQMQQGVVIVNQENKVIL 604
               NLIS+ +LD +  +     GV+ V + +KVI+
Sbjct: 368  LGRNLISVGLLDVQGFKCVAGNGVMKVFKGSKVIM 402


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  146 bits (369), Expect = 4e-32
 Identities = 117/410 (28%), Positives = 191/410 (46%), Gaps = 26/410 (6%)
 Frame = -2

Query: 1551 MDLKVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKE 1372
            +D K  S I+L L D+V+ N +DEES  G+W+KLE LYM  + +NKLY KK LY L M E
Sbjct: 56   LDEKAASAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTNKLYLKKQLYTLHMDE 115

Query: 1371 GITVLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEE 1192
            G   L + N  N +I++L  + VKI+EEDK ++L + LP SY+ + TTIL+GK+++ L++
Sbjct: 116  GTNFLSHLNVLNGLITQLANLGVKIEEEDKRIVLLNSLPSSYDTLSTTILHGKDSIQLKD 175

Query: 1191 VMSTLLFNEIMKMPNQVEQKGSCLMVMEXXXXXXXXGPN----------------*LNKC 1060
            V S LL NE  KM  + E  G   +             N                    C
Sbjct: 176  VTSALLLNE--KMRKKPENHGQVFITESRGRSYQRSSSNYGRSGARGKSKVRSKSKARNC 233

Query: 1059 YFCHKEGYWKNDCKHRQKWLKKKRQDAVADKAMSGIYTE---VLMVSYDN-----TS*DK 904
            Y C + G++K DC + ++   +       D   + +      VL+++ +         + 
Sbjct: 234  YNCDQPGHFKRDCPNPKRGKGESSGQKNDDNTAAMVQNNDDVVLLINEEEECMHLAGTES 293

Query: 903  CWIFDSGSMVHVCSNKDKF-DSVVKEERIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*A 727
             W+ D+ +  H    +D F   V  +   VK  + S  K+ G G +  K   G    L  
Sbjct: 294  EWVVDTAASYHATPVRDLFCRYVAGDYGNVKMGNTSYSKIAGIGDICFKTNVGCTLVLKD 353

Query: 726  VQYVLEACYNLISIRVLDEERCQIQMQQGVVIVNQENKVILKEEKCEGVYKLK*EKLVQG 547
            V++V +   NLIS   LD++  +         + +   VI K      +Y+   E + QG
Sbjct: 354  VRHVPDLRMNLISGIALDQDGYENYFANQKWRLTKGALVIAKGVARGTLYRTNAE-ICQG 412

Query: 546  EVLRINLKGSS-LWRNQMWPEYQGLAVMQVRPWEEGIRVLRLHTIVTIKK 400
            E+   + + S+ LW  +M               E+G+++L   ++++  K
Sbjct: 413  ELNAAHEENSADLWHKRMG-----------HTSEKGLQILSKKSLISFTK 451


>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score =  145 bits (366), Expect = 8e-32
 Identities = 100/329 (30%), Positives = 155/329 (47%), Gaps = 12/329 (3%)
 Frame = -2

Query: 1542 KVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKEGIT 1363
            K    I L L D  +      +S   L  KLE+LYM  S +N+L+    LY  +M   ++
Sbjct: 58   KAHGAIILSLGDTXLREVAKAKSAAKLLLKLESLYMTKSLANRLHKXIKLYTFKMTPSMS 117

Query: 1362 VLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEEVMS 1183
            + E+ + FNKII  L  +D+ +  EDK ++L + L  SY  +   I+YG++ L  +EV S
Sbjct: 118  IEEHLDHFNKIILDLKNIDIAVSNEDKAILLLTSLDASYTNMKEAIMYGRDILTFDEVQS 177

Query: 1182 TLLFNEIMKMPNQVEQKGSCLMVMEXXXXXXXXGPN*LN----------KCYFCHKEGYW 1033
             L   E+ K     E+ G  L +            N             KC+ CHKEG++
Sbjct: 178  ILHARELHKQEESKEELGEGLNIRGKSKKREKKKGNNSKSRSKSKTKKFKCFICHKEGHF 237

Query: 1032 KNDCKH-RQKWLKKKRQDAVADKAMSGIYTEVLMVSYDNTS*DKCWIFDSGSMVHVCSNK 856
            K DC   RQ   KK   +  A   + G Y    +++       K WI DSG   H+C  K
Sbjct: 238  KKDCPDMRQNTXKKTMNEGDATMILDG-YDNAGVLNVAEVDSGKEWILDSGCSFHMCPIK 296

Query: 855  DKFDSVVKEE-RIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQYVLEACYNLISIRV 679
              F+   +     V   +   CK++GTGTVKIK  DG  R L  ++Y+ E   NLIS+ +
Sbjct: 297  AWFEDFKEANGGHVLLGNNKHCKILGTGTVKIKHYDGIERVLEDIRYIPELKMNLISLGM 356

Query: 678  LDEERCQIQMQQGVVIVNQENKVILKEEK 592
            LD+     + +   + V + +  ++K ++
Sbjct: 357  LDKLGYTFKSEPNSLRVARGSLTVMKHQR 385


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  142 bits (357), Expect = 9e-31
 Identities = 105/345 (30%), Positives = 168/345 (48%), Gaps = 23/345 (6%)
 Frame = -2

Query: 1533 SMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKEGITVLE 1354
            S + L L D ++    +E++ +G+W+K+ETL M  S +++L+ KK LY   M+EG+T+ +
Sbjct: 63   STLILSLGDSILREISEEKTALGIWNKVETLCMKKSLAHRLFLKKRLYTFSMREGVTIQD 122

Query: 1353 YPNFFNKIISKLLAVD-VKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEEVMSTL 1177
            + + FNKII  L  V+ VKI +EDK   L S LPKSYE  V T+LYG+ TL LE+V ++L
Sbjct: 123  HIDTFNKIILDLEGVENVKICDEDKAFFLLSSLPKSYEGFVDTMLYGRTTLTLEDVKASL 182

Query: 1176 LFNEIMKMPNQVEQKGSCLMVM---------------EXXXXXXXXGPN*LNKCYFCHKE 1042
               EI K        G  LM                                KC++C KE
Sbjct: 183  SSKEIQKNCELETSNGEGLMARTEKKKDQKNKNQGKGHGKNQETADKKKKKRKCFYCRKE 242

Query: 1041 GYWKNDC--KHRQKWLKKKRQDAVADKAMSGIYTEVLMVSYDNTS*DKCWIFDSGSMVHV 868
            G++  DC  K +++  +K    AVA    S  Y    ++   N++    W+ DSG   H+
Sbjct: 243  GHYIRDCFEKKKKESQEKSGDAAVASDDGSDGYQSADLLVASNSNTKGQWVIDSGCSFHL 302

Query: 867  CSNKDKFDSVVKEERI----VKTVDGSACKVIGTGTVK-IKGKDGTVRAL*AVQYVLEAC 703
            C  K  F    K E +    V   + + C ++G    K  +     +R+L  V++     
Sbjct: 303  CPEKTLF---YKYEAVDGGRVLMGNNNVCNIVGIWFCKRSRCLMELLRSLHEVRHAPRLK 359

Query: 702  YNLISIRVLDEERCQIQMQQGVVIVNQENKVILKEEKCEGVYKLK 568
             NLIS+ +LD      + + G + V +  ++++K     G+Y L+
Sbjct: 360  RNLISLGMLDSLGYFFKSRIGGLEVRKGTEIVMKGVNENGLYVLQ 404


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  140 bits (352), Expect = 4e-30
 Identities = 95/329 (28%), Positives = 163/329 (49%), Gaps = 12/329 (3%)
 Frame = -2

Query: 1527 IQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKEGITVLEYP 1348
            I+ CL+ E  Y F +E S   LW  LE  ++  S  NKL  KK L+    + G T+ E+ 
Sbjct: 90   IRSCLSKEQKYAFKNETSAWKLWKALEGKFLKKSGQNKLLMKKILFRFDYQPGTTMNEHI 149

Query: 1347 NFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEEVMSTLLFN 1168
              FN++++ LL +DV  ++ED  L+L S LP  +E++ TT+L+GKE + L+ V S L   
Sbjct: 150  TIFNQLVADLLNLDVNFEDEDLALMLLSSLPDEFEHLETTLLHGKENVSLDAVCSALYSR 209

Query: 1167 EIMKMPNQVEQKGSC--LMVMEXXXXXXXXGPN*LNK---------CYFCHKEGYWKNDC 1021
            E+ K   + ++  +    +V          G    +K         C FC ++G+WK DC
Sbjct: 210  ELRKQDKKKKKVAAADEALVARGRQQSQSKGRRGWSKSISRVAKDECAFCREKGHWKKDC 269

Query: 1020 KHRQKWLKKKRQDAVADKAMSGIYTEVLMVSYDNTS*DKCWIFDSGSMVHVCSNKDKFDS 841
               +K   K  QD    +  S   ++  +     TS    WI DS    H+   ++ F  
Sbjct: 270  PKLKK-KGKAPQDVNVAECKSDAESDFSLAVSRLTSHPDEWILDSTCTYHMTPMREWFFE 328

Query: 840  VVK-EERIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQYVLEACYNLISIRVLDEER 664
              + +   V   + + CK +G G++K++  DG+ R L  V+YV     +LIS+ +L+ + 
Sbjct: 329  FEELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLESKG 388

Query: 663  CQIQMQQGVVIVNQENKVILKEEKCEGVY 577
             +++M+ G++ V     ++LK  +   +Y
Sbjct: 389  LEVRMRDGILKVTSGALLMLKGVRKNNLY 417


>gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 344

 Score =  138 bits (347), Expect = 1e-29
 Identities = 98/292 (33%), Positives = 148/292 (50%), Gaps = 17/292 (5%)
 Frame = -2

Query: 1542 KVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKEGIT 1363
            K  S I L L DEV+     E++   LW+KLE+ YM  S  N+L  KK LY ++M EG +
Sbjct: 58   KAYSAILLSLGDEVLGEISGEKTADKLWAKLESRYMTKSLHNRLCLKKQLYTMQMHEGES 117

Query: 1362 VLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEEVMS 1183
            + ++ + FN+++  L  +DV +D+ED+ ++L S LP++Y+  V TI++G+ +L +EEV +
Sbjct: 118  IHKHIDNFNQVVLSLKNIDVAVDDEDQAVLLLSSLPRAYDNFVDTIIFGRSSLSMEEVKT 177

Query: 1182 TLLFNEIMKMPNQV---EQKGSCLMV---------MEXXXXXXXXGPN*LNKCYFCHKEG 1039
             L   E+ +           G  LMV          +             NKC+ C KEG
Sbjct: 178  ALQSWELKRRITDSYGGTSSGEGLMVRGRMDERKSFQRRRSKSRSKNKNNNKCHNCQKEG 237

Query: 1038 YWKNDCKHRQKWLKKKRQ---DAVADKAMSGIYTEVLMVSYDNTS*DKCWIFDSGSMVHV 868
            +WK +C   +K      +    AV  +   G    VL VS +    D  WI DS    H+
Sbjct: 238  HWKRNCPELKKDKVSTSEFGGAAVVSEESDG--GNVLFVSSNVN--DDDWILDSACTFHM 293

Query: 867  CSNKDKFDSV--VKEERIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQY 718
              N+D F +   V   +++   DG AC + G GTV+IK  DG VR L  V+Y
Sbjct: 294  TPNRDWFATFQNVDGGKVLMGNDG-ACSIAGKGTVQIKMNDGIVRTLTDVRY 344


>gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 341

 Score =  137 bits (346), Expect = 2e-29
 Identities = 98/292 (33%), Positives = 148/292 (50%), Gaps = 17/292 (5%)
 Frame = -2

Query: 1542 KVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKEGIT 1363
            K  S I L L DEV+     E++   LW+KLE+ YM  S  N+L  KK LY ++M EG +
Sbjct: 55   KAYSAILLSLGDEVLGEVSGEKTADKLWAKLESRYMTKSLHNRLCLKKQLYTMQMHEGES 114

Query: 1362 VLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEEVMS 1183
            + ++ + FN+++  L  +DV +D+ED+ ++L S LP++Y+  V TI++G+ +L +EEV +
Sbjct: 115  IHKHIDNFNQVVLSLKNIDVAVDDEDQAVLLLSSLPRAYDNFVDTIIFGRSSLSMEEVKT 174

Query: 1182 TLLFNEIMKMPNQV---EQKGSCLMV---------MEXXXXXXXXGPN*LNKCYFCHKEG 1039
             L   E+ +           G  LMV          +             NKC+ C KEG
Sbjct: 175  ALQSWELKRRITDSYGGTSSGEGLMVRGRMDERKSFQRRRSKSRSKNKNNNKCHNCQKEG 234

Query: 1038 YWKNDCKHRQKWLKKKRQ---DAVADKAMSGIYTEVLMVSYDNTS*DKCWIFDSGSMVHV 868
            +WK +C   +K      +    AV  +   G    VL VS +    D  WI DS    H+
Sbjct: 235  HWKRNCPELKKDKVSTSEFGGAAVVSEESDG--GNVLFVSSNVN--DDDWILDSACTFHM 290

Query: 867  CSNKDKFDSV--VKEERIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQY 718
              N+D F +   V   +++   DG AC + G GTV+IK  DG VR L  V+Y
Sbjct: 291  TPNRDWFATFQNVDGGKVLMGNDG-ACSIAGKGTVQIKMNDGIVRTLTDVRY 341


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  137 bits (345), Expect = 2e-29
 Identities = 99/339 (29%), Positives = 166/339 (48%), Gaps = 23/339 (6%)
 Frame = -2

Query: 1548 DLKVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKEG 1369
            D K  ++IQL L ++++   + E++   LW KLE++ M    ++K+  K  L+ L+MKE 
Sbjct: 55   DQKALALIQLHLHNDILQECLTEKTSAELWLKLESICMSKDLTSKMQMKMKLFTLKMKEE 114

Query: 1368 ITVLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEEV 1189
             +V+ +   F KI++ L++++VK D+ED  L+L   LP SY     TIL  ++ L L+EV
Sbjct: 115  DSVITHIAEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEV 174

Query: 1188 MSTLLFNEIMKMPNQVE----QKGSCLMV-------------MEXXXXXXXXGPN*LNKC 1060
               L   E MK+  Q +     KG  L V              +         P     C
Sbjct: 175  YDALQNKEKMKIMVQNDGSSSSKGEALHVRGRTENKTSNEKNYDRRGRSKSKPPGNKKFC 234

Query: 1059 YFCHKEGYWKNDCKHRQKWLKKKRQDAVADKAMSGIYT----EVLMVSYDNTS*DKCWIF 892
             +C  + +  ++CK  Q   +K ++D     A + +      + L+V     +    WI 
Sbjct: 235  VYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAVSDDDSGDCLVVFAGCVAGHDEWIL 294

Query: 891  DSGSMVHVCSNKDKFDSV--VKEERIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQY 718
            DS    H+C+ ++ F S   V++  +V+  D + C ++G G+V+IK  DG  R L  V+Y
Sbjct: 295  DSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRY 354

Query: 717  VLEACYNLISIRVLDEERCQIQMQQGVVIVNQENKVILK 601
            +     NLIS+  LD E  +     GV+ V++ + V LK
Sbjct: 355  IPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLK 393


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  137 bits (344), Expect = 3e-29
 Identities = 102/339 (30%), Positives = 169/339 (49%), Gaps = 23/339 (6%)
 Frame = -2

Query: 1548 DLKVTSMIQLCLADEVMYNFMDEESIMGLWSKLETLYMITSFSNKLYPKK*LYGLRMKEG 1369
            D K  ++IQL L ++++   + E++   LW KLE++ M    ++K+  K  L+ L+MKE 
Sbjct: 53   DQKALALIQLHLHNDILQECLTEKTSAELWLKLESICMSKDLTSKMQMKMKLFTLKMKEE 112

Query: 1368 ITVLEYPNFFNKIISKLLAVDVKIDEEDKTLILFSLLPKSYEYIVTTILYGKETLILEEV 1189
             +V+ +   F KI++ L++++VK D+ED  L+L   LP SY     TIL  ++ L L+EV
Sbjct: 113  DSVITHMAEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEV 172

Query: 1188 MSTLLFNEIMKMPNQVE----QKGSCLMV-------------MEXXXXXXXXGPN*LNKC 1060
               L   E MK+  Q +     KG  L V              +         P     C
Sbjct: 173  YDALQNKEKMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRRGRSKSKPPGNKKFC 232

Query: 1059 YFCHKEGYWKNDCKHRQKWLKKKRQD---AVADKAMSGIYT-EVLMVSYDNTS*DKCWIF 892
             +C  + +  ++CK  Q   +K ++D   +VA  A S   + + L+V     +    WI 
Sbjct: 233  VYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDCLVVFAGCVAGHDEWIL 292

Query: 891  DSGSMVHVCSNKDKFDSV--VKEERIVKTVDGSACKVIGTGTVKIKGKDGTVRAL*AVQY 718
            DS    H+C+ ++ F S   V++  +V+  D + C ++G G+V+IK  DG  R L  V+Y
Sbjct: 293  DSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRY 352

Query: 717  VLEACYNLISIRVLDEERCQIQMQQGVVIVNQENKVILK 601
            +     NLIS+  LD E  +     GV+ V++ + V LK
Sbjct: 353  IPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLK 391