BLASTX nr result
ID: Anemarrhena21_contig00010560
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00010560
(821 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 264 4e-68
emb|CDP17738.1| unnamed protein product [Coffea canephora] 251 3e-64
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 230 7e-58
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 215 2e-53
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 212 2e-52
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 210 8e-52
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 209 2e-51
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 207 6e-51
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 206 1e-50
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 206 1e-50
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 206 2e-50
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 206 2e-50
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 206 2e-50
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 206 2e-50
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 205 2e-50
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 205 2e-50
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 199 2e-48
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 199 2e-48
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 199 2e-48
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 198 3e-48
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 264 bits (675), Expect = 4e-68
Identities = 139/276 (50%), Positives = 186/276 (67%), Gaps = 4/276 (1%)
Frame = -3
Query: 819 KLQNKNKESRSSEANVAETDGN-DSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRK 643
KLQ K K + +ANVAE + +SD S+ +S+ + P EWILD+G TYH+CP +
Sbjct: 185 KLQKKEKVPQ--DANVAECKSDVESDISLI-VSLSASSYPD---EWILDSGCTYHMCPIR 238
Query: 642 EWFSSFEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISA 463
+WF F++L GVV MGND+ C+ VG+G++ ++ D R L+ VRYVP LKKNLI + A
Sbjct: 239 DWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGA 298
Query: 462 LESEGLRLNVVDXXXXXXXXXXXXXXXXXKNNLYYLKGSTV--TESLATSESNVE-DTTK 292
LES+GL + + D KNNLYY +GSTV T + ATS S + + K
Sbjct: 299 LESKGLVVTMRDGILKATLGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAK 358
Query: 291 LWHLILGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDY 112
LWH+ LGH E+ L+ L K GLLKG K C L+FCEHC+LGKQ +VKFGTAIH +G+LDY
Sbjct: 359 LWHMRLGHAGEKSLQILTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDY 418
Query: 111 VHMDIWGLTKTVSVGGKN*FVSFIDEYSRRVWVYTM 4
VH D+WG KT S+GG++ FV+F+D++SRRVWV+TM
Sbjct: 419 VHSDVWGPAKTPSIGGRHYFVTFVDDFSRRVWVFTM 454
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 251 bits (642), Expect = 3e-64
Identities = 134/273 (49%), Positives = 176/273 (64%), Gaps = 5/273 (1%)
Frame = -3
Query: 807 KNKESRSSEANVAETDGN-DSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKEWFS 631
K K + NVAE + +SDFS+ + S EWILD+ TYH+ P +EWF
Sbjct: 273 KKKGKAPQDVNVAECKSDAESDFSLAVSRLT-----SHPDEWILDSTCTYHMTPMREWFF 327
Query: 630 SFEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISALESE 451
FE+L G V MGND+ C+ VG+G++ ++ D R LK VRYVP LK++LI + LES+
Sbjct: 328 EFEELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLESK 387
Query: 450 GLRLNVVDXXXXXXXXXXXXXXXXXKNNLYYLKGSTV--TESLATSESNVEDT--TKLWH 283
GL + + D KNNLYY +GSTV T ++ATS S+ +D TKLWH
Sbjct: 388 GLEVRMRDGILKVTSGALLMLKGVRKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKLWH 447
Query: 282 LILGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDYVHM 103
+ LG E+ L++LAK GLLKG K C L+FCEHC+L KQ KVKFGT IH +G+LDYVH
Sbjct: 448 MRLGDAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHS 507
Query: 102 DIWGLTKTVSVGGKN*FVSFIDEYSRRVWVYTM 4
D+WG KT S+GG+ FV+FID++SRRVWV+TM
Sbjct: 508 DVWGPAKTPSLGGRYYFVTFIDDFSRRVWVFTM 540
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 230 bits (587), Expect = 7e-58
Identities = 125/255 (49%), Positives = 163/255 (63%), Gaps = 4/255 (1%)
Frame = -3
Query: 819 KLQNKNKESRSSEANVAETDGN-DSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRK 643
KLQ K K + +ANVAE + +SD S+ I+ EWILD+G TYH+CP +
Sbjct: 186 KLQKKEKVLQ--DANVAECKSDVESDISL----IVSLSASLYLDEWILDSGCTYHMCPIR 239
Query: 642 EWFSSFEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISA 463
+WF F++L GVV MGND+ C+ VG+G++ ++ D R L+ VRYVP LKKNLI + A
Sbjct: 240 DWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGA 299
Query: 462 LESEGLRLNVVDXXXXXXXXXXXXXXXXXKNNLYYLKGSTV--TESLATSESNVE-DTTK 292
LES+GL + + D KNNLYY +GSTV T + ATS S + + TK
Sbjct: 300 LESKGLVVTMRDGILKATSGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEATK 359
Query: 291 LWHLILGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDY 112
LWH+ LGH E+ L+ K GLLKG K C L+FCEHC+LGKQ +VKFGTAIH +G+LDY
Sbjct: 360 LWHMRLGHAGEKSLQIFTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDY 419
Query: 111 VHMDIWGLTKTVSVG 67
VH D+WG KT S+G
Sbjct: 420 VHSDVWGPAKTPSIG 434
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 215 bits (548), Expect = 2e-53
Identities = 111/272 (40%), Positives = 162/272 (59%), Gaps = 2/272 (0%)
Frame = -3
Query: 813 QNKNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKEWF 634
+ K E +S A VAE D N + ++++ + W+LD+GA+YH+CPR+EWF
Sbjct: 241 KKKQSEKQSVSAAVAEEDTNSEE----DIALVADEHTHHSDVWVLDSGASYHICPRREWF 296
Query: 633 SSFEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISALES 454
+++E++ G + M N C++VG G++ I+ D L +VR+VPL+ KNLI +S L+S
Sbjct: 297 TTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDS 356
Query: 453 EGLRLNVVDXXXXXXXXXXXXXXXXXKNNLYYLKGSTVTES--LATSESNVEDTTKLWHL 280
+G + D + LY+L+GSTVT S +A+SE + +D TKLWH+
Sbjct: 357 KGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQKDMTKLWHI 416
Query: 279 ILGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDYVHMD 100
LGH E ++ L+K LL G K +L+FCEHC+ GK + KF AIH +G LDY+H D
Sbjct: 417 RLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSD 476
Query: 99 IWGLTKTVSVGGKN*FVSFIDEYSRRVWVYTM 4
WG + S+GG FVS ID+YSR WVY M
Sbjct: 477 CWGPCRVESLGGCRFFVSIIDDYSRMTWVYMM 508
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 212 bits (540), Expect = 2e-52
Identities = 105/269 (39%), Positives = 158/269 (58%), Gaps = 3/269 (1%)
Frame = -3
Query: 807 KNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKEWFSS 628
K K+ +A V + +D++ L + C + +WILDT TYH+CP ++WF++
Sbjct: 265 KGKKEEEGKAAVVTDEKSDAE-----LLVAYAGCAQTSDQWILDTACTYHMCPNRDWFAT 319
Query: 627 FEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISALESEG 448
+E ++ G VLMG+D C + G+GTV IK+FD +R L VR++P LK++LI + L+ +G
Sbjct: 320 YEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKG 379
Query: 447 LRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVTESLATSESNVE--DTTKLWHLI 277
+ + D K+ NLY+L+G+T+ ++AT ++ D T LWH+
Sbjct: 380 YKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMR 439
Query: 276 LGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDYVHMDI 97
LGH E L L+K GLL G L FCEHC+ GK +VKF T+ H EG+LDYVH D+
Sbjct: 440 LGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDL 499
Query: 96 WGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
WG + S GG ++ +D+YSR+VW Y
Sbjct: 500 WGPARKTSFGGARYMMTIVDDYSRKVWPY 528
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 210 bits (535), Expect = 8e-52
Identities = 106/267 (39%), Positives = 160/267 (59%), Gaps = 1/267 (0%)
Frame = -3
Query: 807 KNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKEWFSS 628
K K+ +A VA + D++ L + C + EW+LDTG TYH+CP ++WF++
Sbjct: 207 KGKQEEQGKAAVATDNKPDAE-----LLVAYAGCVQTSDEWLLDTGCTYHMCPNRDWFTT 261
Query: 627 FEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISALESEG 448
+E ++ G VLMG++ C++ GVGT+ IK+FD +R L VR++P LK+NLI +S L+ +G
Sbjct: 262 YEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLDRKG 321
Query: 447 LRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVTESLATSESNVEDTTKLWHLILG 271
R + D KN +LY+L+G+T+ ++A ++ ++ LWH+ LG
Sbjct: 322 YRYSGGDGILKVTKGSLVVMKADIKNADLYHLQGTTIVGNVAAVTDSLSNSD-LWHMRLG 380
Query: 270 HTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDYVHMDIWG 91
H E L L+K GLL G L FCEHC+ GK +VKF T+ H EG+LDYVH D+WG
Sbjct: 381 HMSEIGLAELSKRGLLDGQNIGKLKFCEHCIFGKHKRVKFTTSTHTTEGILDYVHSDLWG 440
Query: 90 LTKTVSVGGKN*FVSFIDEYSRRVWVY 10
+ S GG ++ +D+YSR+VW Y
Sbjct: 441 PARKRSFGGARYMMTIVDDYSRKVWPY 467
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 209 bits (531), Expect = 2e-51
Identities = 109/281 (38%), Positives = 158/281 (56%), Gaps = 11/281 (3%)
Frame = -3
Query: 819 KLQNKNKESRS--------SEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGAT 664
KLQ+K+K +R E A SD L + C + +WILDT T
Sbjct: 160 KLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAE---LLVAYAGCAQTSDQWILDTACT 216
Query: 663 YHVCPRKEWFSSFEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKK 484
YH+CP ++WF+++E ++ G VLMG+D C + G+GTV IK+FD +R L VR++P LK+
Sbjct: 217 YHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKR 276
Query: 483 NLIFISALESEGLRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVTESLATSESNV 307
+LI + L+ +G + + D K NLY+L+G+T+ ++A ++
Sbjct: 277 SLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAAVSDSL 336
Query: 306 E--DTTKLWHLILGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHC 133
D T LWH+ LGH E L L+K GLL G L FCEHC+ GK +VKF T+ H
Sbjct: 337 SNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHT 396
Query: 132 IEGLLDYVHMDIWGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
EG+LDYVH D+WG + S GG ++ +D+YSR+VW Y
Sbjct: 397 TEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPY 437
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 207 bits (527), Expect = 6e-51
Identities = 102/267 (38%), Positives = 155/267 (58%), Gaps = 3/267 (1%)
Frame = -3
Query: 801 KESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKEWFSSFE 622
K+ +A V + +D++ + + C + +WILDT TYH+CP ++WF+++E
Sbjct: 233 KKEEEGKAAVVTDEKSDAELLVAYVG-----CAQTSDQWILDTACTYHMCPNRDWFATYE 287
Query: 621 KLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISALESEGLR 442
++ G VLMG+D C + G+GTV IK+FD +R L VR++P LK++LI L+ +G +
Sbjct: 288 TVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLDRKGYK 347
Query: 441 LNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVTESLATSESNVE--DTTKLWHLILG 271
+ D K+ NLY+L+G+T+ ++A ++ D T LWH+ LG
Sbjct: 348 YSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLG 407
Query: 270 HTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDYVHMDIWG 91
H E L L+K GLL G L FCEHC+ GK +VKF T+ H EG+LDYVH D+WG
Sbjct: 408 HMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWG 467
Query: 90 LTKTVSVGGKN*FVSFIDEYSRRVWVY 10
+ S GG ++ +D+YSR+VW Y
Sbjct: 468 PARKTSFGGARYIMTIVDDYSRKVWPY 494
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 206 bits (525), Expect = 1e-50
Identities = 103/269 (38%), Positives = 157/269 (58%), Gaps = 3/269 (1%)
Frame = -3
Query: 807 KNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKEWFSS 628
K K+ +A V + +D++ L + C + +WILDT TYH+CP ++WF++
Sbjct: 82 KGKKEDEGKAAVVTDEKSDAE-----LLVAYAGCAQTSDQWILDTACTYHMCPNRDWFAT 136
Query: 627 FEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISALESEG 448
+E ++ G VLMG+D C + G+GTV IK+FD +R L VR++P LK++LI + L+ +G
Sbjct: 137 YEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKG 196
Query: 447 LRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVTESLATSESNVE--DTTKLWHLI 277
+ + D K+ NLY+L+G+T+ ++AT ++ D T LWH+
Sbjct: 197 YKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMR 256
Query: 276 LGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDYVHMDI 97
LGH E L L+ GLL G L FCEHC+ GK +VKF T+ H EG+LDYVH D+
Sbjct: 257 LGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDL 316
Query: 96 WGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
WG + S GG ++ +++YSR+VW Y
Sbjct: 317 WGPARKTSFGGARYMMTIVNDYSRKVWPY 345
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 206 bits (525), Expect = 1e-50
Identities = 103/269 (38%), Positives = 157/269 (58%), Gaps = 3/269 (1%)
Frame = -3
Query: 807 KNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKEWFSS 628
K K+ +A V + +D++ L + C + +WILDT TYH+CP ++WF++
Sbjct: 250 KGKKEDEGKAAVVTDEKSDAE-----LLVAYAGCAQTSDQWILDTACTYHMCPNRDWFAT 304
Query: 627 FEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISALESEG 448
+E ++ G VLMG+D C + G+GTV IK+FD +R L VR++P LK++LI + L+ +G
Sbjct: 305 YEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKG 364
Query: 447 LRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVTESLATSESNVE--DTTKLWHLI 277
+ + D K+ NLY+L+G+T+ ++AT ++ D T LWH+
Sbjct: 365 YKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMR 424
Query: 276 LGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDYVHMDI 97
LGH E L L+ GLL G L FCEHC+ GK +VKF T+ H EG+LDYVH D+
Sbjct: 425 LGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDL 484
Query: 96 WGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
WG + S GG ++ +++YSR+VW Y
Sbjct: 485 WGPARKTSFGGARYMMTIVNDYSRKVWPY 513
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 206 bits (523), Expect = 2e-50
Identities = 102/269 (37%), Positives = 156/269 (57%), Gaps = 3/269 (1%)
Frame = -3
Query: 807 KNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKEWFSS 628
K K+ +A V + +D++ L + C + +WIL+T YH+CP ++WF++
Sbjct: 472 KGKKEEEGKAAVVTDEKSDAE-----LLVAYAGCAQTSDQWILNTACIYHMCPNRDWFAT 526
Query: 627 FEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISALESEG 448
+E ++ G VLMG+D C + G+GTV IK+FD +R L VR++P LK++LI + L+ +G
Sbjct: 527 YEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKG 586
Query: 447 LRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVTESLATSESNVE--DTTKLWHLI 277
+ + D K+ NLY+L+G+T+ ++A ++ D T LWH+
Sbjct: 587 YKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMR 646
Query: 276 LGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDYVHMDI 97
LGH E L L+K GLL G L FCEHC+ GK +VKF T+ H EG+LDYVH D+
Sbjct: 647 LGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDL 706
Query: 96 WGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
WG + S GG ++ +D+YSR+VW Y
Sbjct: 707 WGPARKTSFGGTRYMMTIVDDYSRKVWPY 735
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 206 bits (523), Expect = 2e-50
Identities = 102/269 (37%), Positives = 155/269 (57%), Gaps = 3/269 (1%)
Frame = -3
Query: 807 KNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKEWFSS 628
K K+ +A V + +D++ L + C + +WILDT TYH+CP ++WF++
Sbjct: 97 KGKKEEEGKAAVVTDEKSDAE-----LLVAYAGCAQTSDQWILDTACTYHMCPNRDWFAT 151
Query: 627 FEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISALESEG 448
+E ++ G VLMG+D C + G+G V IK+FD + L VR++P LK++LI + L+ +G
Sbjct: 152 YEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKG 211
Query: 447 LRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVTESLATSESNVE--DTTKLWHLI 277
+ + D K+ NLY+L+G+T+ ++A ++ D T LWH+
Sbjct: 212 YKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMR 271
Query: 276 LGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDYVHMDI 97
LGH E L L+K GLL G L FCEHC+ GK +VKF T+ H EG+LDYVH D+
Sbjct: 272 LGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDL 331
Query: 96 WGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
WG + S GG ++ +D+YSR+VW Y
Sbjct: 332 WGPARKTSFGGARYIMTIVDDYSRKVWPY 360
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 206 bits (523), Expect = 2e-50
Identities = 102/269 (37%), Positives = 156/269 (57%), Gaps = 3/269 (1%)
Frame = -3
Query: 807 KNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKEWFSS 628
K K+ +A V + +D++ L + C + +WIL+T YH+CP ++WF++
Sbjct: 265 KGKKEEEGKAAVVTDEKSDAE-----LLVAYAGCAQTSDQWILNTACIYHMCPNRDWFAT 319
Query: 627 FEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISALESEG 448
+E ++ G VLMG+D C + G+GTV IK+FD +R L VR++P LK++LI + L+ +G
Sbjct: 320 YEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKG 379
Query: 447 LRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVTESLATSESNVE--DTTKLWHLI 277
+ + D K+ NLY+L+G+T+ ++A ++ D T LWH+
Sbjct: 380 YKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMR 439
Query: 276 LGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDYVHMDI 97
LGH E L L+K GLL G L FCEHC+ GK +VKF T+ H EG+LDYVH D+
Sbjct: 440 LGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDL 499
Query: 96 WGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
WG + S GG ++ +D+YSR+VW Y
Sbjct: 500 WGPARKTSFGGTRYMMTIVDDYSRKVWPY 528
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 206 bits (523), Expect = 2e-50
Identities = 102/269 (37%), Positives = 155/269 (57%), Gaps = 3/269 (1%)
Frame = -3
Query: 807 KNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKEWFSS 628
K K+ +A V + +D++ L + C + +WILDT TYH+CP ++WF++
Sbjct: 97 KGKKEEEGKAAVVTDEKSDAE-----LLVAYAGCAQTSDQWILDTACTYHMCPNRDWFAT 151
Query: 627 FEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISALESEG 448
+E ++ G VLMG+D C + G+G V IK+FD + L VR++P LK++LI + L+ +G
Sbjct: 152 YEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKG 211
Query: 447 LRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVTESLATSESNVE--DTTKLWHLI 277
+ + D K+ NLY+L+G+T+ ++A ++ D T LWH+
Sbjct: 212 YKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMR 271
Query: 276 LGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDYVHMDI 97
LGH E L L+K GLL G L FCEHC+ GK +VKF T+ H EG+LDYVH D+
Sbjct: 272 LGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDL 331
Query: 96 WGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
WG + S GG ++ +D+YSR+VW Y
Sbjct: 332 WGPARKTSFGGARYIMTIVDDYSRKVWPY 360
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 205 bits (522), Expect = 2e-50
Identities = 104/269 (38%), Positives = 155/269 (57%), Gaps = 3/269 (1%)
Frame = -3
Query: 807 KNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKEWFSS 628
K K+ +A V + +D++ L + C + +WILDT TYH+CP ++WF++
Sbjct: 300 KGKKEEEGKAAVVTDEKSDTE-----LLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFAT 354
Query: 627 FEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISALESEG 448
+E L+ G VLMG+D C + G+GTV IK+FD +R L VR++P LK++LI + L+ +G
Sbjct: 355 YEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKG 414
Query: 447 LRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVTESLATSESNVE--DTTKLWHLI 277
+ + D K+ NLY+L+G+T+ ++A ++ D T LWH+
Sbjct: 415 YKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMR 474
Query: 276 LGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDYVHMDI 97
LGH E L L+K LL G L FCEHC+ GK +VKF T+ H EG+LDYVH D+
Sbjct: 475 LGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDL 534
Query: 96 WGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
WG S GG ++ +D+YSR+VW Y
Sbjct: 535 WGPACKTSFGGARYMMTIVDDYSRKVWPY 563
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 205 bits (522), Expect = 2e-50
Identities = 104/269 (38%), Positives = 155/269 (57%), Gaps = 3/269 (1%)
Frame = -3
Query: 807 KNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKEWFSS 628
K K+ +A V + +D++ L + C + +WILDT TYH+CP ++WF++
Sbjct: 300 KGKKEEEGKAAVVTDEKSDTE-----LLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFAT 354
Query: 627 FEKLKEGVVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISALESEG 448
+E L+ G VLMG+D C + G+GTV IK+FD +R L VR++P LK++LI + L+ +G
Sbjct: 355 YEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKG 414
Query: 447 LRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVTESLATSESNVE--DTTKLWHLI 277
+ + D K+ NLY+L+G+T+ ++A ++ D T LWH+
Sbjct: 415 YKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMR 474
Query: 276 LGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLDYVHMDI 97
LGH E L L+K LL G L FCEHC+ GK +VKF T+ H EG+LDYVH D+
Sbjct: 475 LGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDL 534
Query: 96 WGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
WG S GG ++ +D+YSR+VW Y
Sbjct: 535 WGPACKTSFGGARYMMTIVDDYSRKVWPY 563
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 199 bits (506), Expect = 2e-48
Identities = 105/275 (38%), Positives = 160/275 (58%), Gaps = 5/275 (1%)
Frame = -3
Query: 819 KLQNKNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKE 640
K + K+ + S A+ A +D + D + C + EWILD+ ++H+C ++
Sbjct: 251 KERKNKKDGKVSVASAAASDDDSGDCLVVFAG-----CVAGHDEWILDSACSFHICTKRN 305
Query: 639 WFSSFEKLKEG-VVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISA 463
WFSS++ +++G VV MG+D+ C IVG+G+V IK D M R LK VRY+P + +NLI +S
Sbjct: 306 WFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLST 365
Query: 462 LESEGLRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVT--ESLATSESNVEDT-T 295
L++EG + + D + LY L+G T+T +S A + +N E + T
Sbjct: 366 LDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTLTGSDSAAAAVTNDEPSKT 425
Query: 294 KLWHLILGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLD 115
LWH+ LGH + L K LLKG + + FCEHC+ GK +V+F T++H +G LD
Sbjct: 426 NLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLD 485
Query: 114 YVHMDIWGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
YVH D+WG +K S+GG ++ ID+YSR+VW Y
Sbjct: 486 YVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPY 520
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 199 bits (505), Expect = 2e-48
Identities = 105/275 (38%), Positives = 160/275 (58%), Gaps = 5/275 (1%)
Frame = -3
Query: 819 KLQNKNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKE 640
K + K+ + S A+ A +D + D + C + EWILD+ ++H+C ++
Sbjct: 251 KERKNKKDGKVSVASAAASDDDSGDCLVVFAG-----CVAGHDEWILDSACSFHICTKRN 305
Query: 639 WFSSFEKLKEG-VVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISA 463
WFSS++ +++G VV MG+D+ C IVG+G+V IK D M R LK VRY+P + +NLI +S
Sbjct: 306 WFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLST 365
Query: 462 LESEGLRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVT--ESLATSESNVEDT-T 295
L++EG + + D + LY L+G T+T +S A + +N E + T
Sbjct: 366 LDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTLTGSDSAAAAVTNDEPSKT 425
Query: 294 KLWHLILGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLD 115
LWH+ LGH + L K LLKG + + FCEHC+ GK +V+F T++H +G LD
Sbjct: 426 NLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLD 485
Query: 114 YVHMDIWGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
YVH D+WG +K S+GG ++ ID+YSR+VW Y
Sbjct: 486 YVHADLWGPSKKPSLGGARYMLTVIDDYSRKVWPY 520
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 199 bits (505), Expect = 2e-48
Identities = 105/275 (38%), Positives = 160/275 (58%), Gaps = 5/275 (1%)
Frame = -3
Query: 819 KLQNKNKESRSSEANVAETDGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRKE 640
K + K+ + S A+ A +D + D + C + EWILD+ ++H+C ++
Sbjct: 251 KERKNKKDGKVSVASAAASDDDSGDCLVVFAG-----CVAGHDEWILDSACSFHICTKRN 305
Query: 639 WFSSFEKLKEG-VVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFISA 463
WFSS++ +++G VV MG+D+ C IVG+G+V IK D M R LK VRY+P + +NLI +S
Sbjct: 306 WFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLST 365
Query: 462 LESEGLRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVT--ESLATSESNVEDT-T 295
L++EG + + D + LY L+G T+T +S A + +N E + T
Sbjct: 366 LDAEGYKYSGSDGVLKVSKGSLVCLKGDVNSAKLYVLRGCTLTGSDSAAAAITNDEPSKT 425
Query: 294 KLWHLILGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLD 115
LWH+ LGH + L K LLKG + + FCEHC+ GK +V+F T++H +G LD
Sbjct: 426 NLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLD 485
Query: 114 YVHMDIWGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
YVH D+WG +K S+GG ++ ID+YSR+VW Y
Sbjct: 486 YVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPY 520
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 198 bits (504), Expect = 3e-48
Identities = 106/275 (38%), Positives = 162/275 (58%), Gaps = 5/275 (1%)
Frame = -3
Query: 819 KLQNKNKESRSSEANVAET-DGNDSDFSIYSLSIMPTVCPSDAFEWILDTGATYHVCPRK 643
KLQNK K +A+V + D +DS + ++ VC S EWILDT ++H+C +
Sbjct: 146 KLQNKEKRKSDGKASVVTSADNSDSGDCL----VVFVVCVSSHDEWILDTTCSFHICINR 201
Query: 642 EWFSSFEKLKEG-VVLMGNDHACRIVGVGTVLIKIFDKMVRELKKVRYVPLLKKNLIFIS 466
+WFSS++ ++ G VV MG+D+ IVG+G+V IK D M R LK VR++P + +NLI +S
Sbjct: 202 DWFSSYKSVQNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPRMARNLISLS 261
Query: 465 ALESEGLRLNVVDXXXXXXXXXXXXXXXXXKN-NLYYLKGSTVTESLATSESNVEDTTK- 292
L++EG + + + NLY L+GST+ + + + ++ +K
Sbjct: 262 TLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGYVTAAVVSKDEPSKT 321
Query: 291 -LWHLILGHTDEECLKSLAKHGLLKGAKTCNLDFCEHCMLGKQMKVKFGTAIHCIEGLLD 115
+WH+ LGH E + L K LL G N+ FCEHC+ GK +VKF T++H +G+LD
Sbjct: 322 NMWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRTKGILD 381
Query: 114 YVHMDIWGLTKTVSVGGKN*FVSFIDEYSRRVWVY 10
YVH D+WG ++ S+GG ++ ID+YSR+VW Y
Sbjct: 382 YVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPY 416