BLASTX nr result
ID: Anemarrhena21_contig00008752
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00008752
(3614 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008806649.1| PREDICTED: probable DNA-directed RNA polymer... 1786 0.0
ref|XP_010918457.1| PREDICTED: DNA-directed RNA polymerase I sub... 1779 0.0
ref|XP_009414083.1| PREDICTED: DNA-directed RNA polymerase I sub... 1761 0.0
ref|XP_010918458.1| PREDICTED: probable DNA-directed RNA polymer... 1722 0.0
ref|XP_010918459.1| PREDICTED: probable DNA-directed RNA polymer... 1681 0.0
ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I sub... 1622 0.0
ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I sub... 1622 0.0
ref|XP_012698556.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 1599 0.0
ref|XP_008664805.1| PREDICTED: DNA-directed RNA polymerase I sub... 1596 0.0
ref|XP_010067710.1| PREDICTED: probable DNA-directed RNA polymer... 1588 0.0
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub... 1578 0.0
tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m... 1570 0.0
ref|XP_011087223.1| PREDICTED: DNA-directed RNA polymerase I sub... 1569 0.0
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer... 1569 0.0
ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I sub... 1569 0.0
gb|KHN35264.1| DNA-directed RNA polymerase I subunit RPA2 [Glyci... 1566 0.0
ref|XP_004486057.1| PREDICTED: DNA-directed RNA polymerase I sub... 1559 0.0
ref|XP_012068704.1| PREDICTED: DNA-directed RNA polymerase I sub... 1558 0.0
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas... 1554 0.0
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro... 1554 0.0
>ref|XP_008806649.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2
[Phoenix dactylifera]
Length = 1177
Score = 1786 bits (4626), Expect = 0.0
Identities = 883/1175 (75%), Positives = 1006/1175 (85%), Gaps = 13/1175 (1%)
Frame = -2
Query: 3508 PDYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSP-- 3335
PDY ALRELF+PHI+SF+YFID+GLE AL SIRP+++ DPST LRIY P++ P
Sbjct: 8 PDYEALRELFRPHIDSFNYFIDEGLEKALLSIRPVEVSDPSTGGKLRIYFENPQVFHPVR 67
Query: 3334 ------KDATSTRKIYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMS 3173
T +YP ECR+A+TTY+G V + QYNE ++ + FG LPIML S
Sbjct: 68 EGRITTTKGRITEALYPHECRQARTTYKGEFKVTICLQYNERQPVQTPMSFGHLPIMLRS 127
Query: 3172 KRCHLRGAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGD 2993
+ CHL+ A+PQKLI+HKEEATEMGGYFICNGLERL RLLI+PKRNYPM ++R S R+RG
Sbjct: 128 RLCHLKDADPQKLIFHKEEATEMGGYFICNGLERLGRLLIVPKRNYPMGMIRSSFRSRGV 187
Query: 2992 GYSDKAVIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHE 2813
GYSDKAV++RCVREDQSSV+VKLYYLQNGSARLGFWI+GREFLLPVGIVLKALIDT+D E
Sbjct: 188 GYSDKAVVIRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTSDRE 247
Query: 2812 IYVSLTCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMW 2633
I+VSLTCCYN+RYQ+ +G VG+Q+IGERAQIIL+EVR LSL T S+CL HIGEYF+P M
Sbjct: 248 IFVSLTCCYNDRYQKQRGAVGSQIIGERAQIILEEVRDLSLLTSSQCLKHIGEYFRPVMD 307
Query: 2632 GFEGESYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQE 2453
GFE E +T VAEAVLRD++ VHLT NHDKFNLLIFMLQKLYALVDQT APDN D LQNQE
Sbjct: 308 GFENEFHTTVAEAVLRDYVFVHLTRNHDKFNLLIFMLQKLYALVDQTVAPDNSDALQNQE 367
Query: 2452 VLLPGHLITLFLKEKVMEWLRKSRRQLVDEIA-KGNNFNIKDVEQVKKVLQRGSSTIGKS 2276
+LLPGHLIT+++KEKV +WL KSRRQL+DE+A K N I V QV K L R ++++G+S
Sbjct: 368 ILLPGHLITIYVKEKVQDWLNKSRRQLLDELAKKEKNLQISMVHQVAKFLNRNAASVGRS 427
Query: 2275 VESMIKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKL 2096
VESMIK+GRL+T SS+DLPQ+EGMT+QAERLNF RF+SHFR+VHRGA+FAKMR T VRKL
Sbjct: 428 VESMIKLGRLTTSSSLDLPQREGMTIQAERLNFYRFLSHFRSVHRGASFAKMRITSVRKL 487
Query: 2095 MPESWGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGM 1916
+PESWGFLCPVHTPDGEPCGLLNHMTSTC ++S+Y+SEGK+KDF I+ SI VLV +GM
Sbjct: 488 LPESWGFLCPVHTPDGEPCGLLNHMTSTCCISSFYDSEGKVKDFLKIRMSIMTVLVGVGM 547
Query: 1915 SPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYV 1736
+PLLPKLE AGPP VL VLLDG VVGSIA S+VE+ VAHIRSLKLS+ SG+PNDLEVGYV
Sbjct: 548 TPLLPKLERAGPPVVLHVLLDGCVVGSIASSKVEKAVAHIRSLKLSSLSGVPNDLEVGYV 607
Query: 1735 PLSLGGAYPGLYLFTSPSRFLRPVRNISHT--ANCNIELIGPFEQAFMEIRCADGGDGGR 1562
PLSLGG YPGLYLFTSPSRF+RPVRNISH+ +N NIELIGPFEQAFMEIRCADGGDGGR
Sbjct: 608 PLSLGGTYPGLYLFTSPSRFIRPVRNISHSSDSNLNIELIGPFEQAFMEIRCADGGDGGR 667
Query: 1561 R-SFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVK 1385
R SFPATHEEIHPTG+LSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFS+QALQFR+DVK
Sbjct: 668 RESFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQALQFRADVK 727
Query: 1384 AYHLQAPQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCR 1205
+YHLQ PQSPIVRT Y+KYC+DEFPTGTNAIVAVLAY+GYDMEDAMILNKSSVDRGLCR
Sbjct: 728 SYHLQTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLCR 787
Query: 1204 GHIYQTETIDLAEKQEKSGPV-KIFARSNDKTMSSSIDSDGLPYIGQMINPKEPLYSTYD 1028
GHIYQTE+IDL + ++ V +IFARS++KTM SSIDSDGLPYIGQ+I+P EPLYS+Y+
Sbjct: 788 GHIYQTESIDLTKNHDREDRVLEIFARSSEKTMKSSIDSDGLPYIGQVIHPNEPLYSSYN 847
Query: 1027 TLTSMTKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSR 848
TLTS+TKPT +KG SK Y+ KVNIRTRR R PIIGDKFSSR
Sbjct: 848 TLTSVTKPTRLKG-----SEPVIIDYVTVDGTTSKNYMQKVNIRTRRTRYPIIGDKFSSR 902
Query: 847 HGQKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFI 668
HGQKGVCSQLWPDIDMPFS+VTGMRPDLIINPHAFPSRMTIGMLLESIAAK GSLHGKF+
Sbjct: 903 HGQKGVCSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFV 962
Query: 667 DATPFASSVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIG 488
DATPF +SVS++D ++ S+ S+LVDELGPMLAS+GFNYHG EVLYSG +GTE+TCEIFIG
Sbjct: 963 DATPFQNSVSEKDEDRPSKSSTLVDELGPMLASYGFNYHGVEVLYSGVFGTELTCEIFIG 1022
Query: 487 PVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLH 308
PVYYQRLRHMVSDKFQVRSTGTVD ITRQP+ GEMERDSVLAHGAAYLLH
Sbjct: 1023 PVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDSVLAHGAAYLLH 1082
Query: 307 DRLHSCSDYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKNFTCHACKSKKGM 128
DRLHSCSDYHIAEVCSFCGS+LTA+VIQ QKR V EI G+P +TPK++TCHACK+ KGM
Sbjct: 1083 DRLHSCSDYHIAEVCSFCGSVLTASVIQPQKRAVREIHGLPPARTPKSYTCHACKTSKGM 1142
Query: 127 ETVAMPYVFRYLATELAAMNIRMELKLSNRAGC*G 23
ETVAMPYVF+YLA E+AAMNI+MEL+LSNRAG G
Sbjct: 1143 ETVAMPYVFKYLAAEMAAMNIKMELQLSNRAGSGG 1177
>ref|XP_010918457.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
[Elaeis guineensis]
Length = 1175
Score = 1779 bits (4607), Expect = 0.0
Identities = 878/1172 (74%), Positives = 1000/1172 (85%), Gaps = 13/1172 (1%)
Frame = -2
Query: 3505 DYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSP--- 3335
DY ALRELF+PHI+SF+YF+D+GLE AL SIRP++I DPS LRIY P++ P
Sbjct: 9 DYEALRELFRPHIDSFNYFLDEGLEKALLSIRPVEISDPSVGGKLRIYFENPQVFHPLRE 68
Query: 3334 -----KDATSTRKIYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSK 3170
T +YP ECR+A TTY+G V + QYN+ ++ + FG LPIML SK
Sbjct: 69 GRITKSKGGITEALYPHECRQAGTTYKGEFKVTICLQYNDQQPVQIPMNFGHLPIMLRSK 128
Query: 3169 RCHLRGAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDG 2990
CHL+ A+PQKLI+HKEEATEMGGYFICNGLERL RLLI+PKRNYPM ++R S R+RG G
Sbjct: 129 LCHLKDADPQKLIFHKEEATEMGGYFICNGLERLGRLLIVPKRNYPMGMIRSSFRSRGVG 188
Query: 2989 YSDKAVIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEI 2810
YSDKAV+MRCVREDQSSV+VKLYYLQNGSARLGFWI+GREFLLP+GIVLKALIDT+D EI
Sbjct: 189 YSDKAVVMRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPIGIVLKALIDTSDREI 248
Query: 2809 YVSLTCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWG 2630
+VSLTCCYN+RYQ+ +G VG+Q+IGERAQIIL+EVR LSL T S+CL HIGEYF+PAM G
Sbjct: 249 FVSLTCCYNDRYQKQRGAVGSQIIGERAQIILEEVRDLSLLTSSQCLKHIGEYFRPAMDG 308
Query: 2629 FEGESYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEV 2450
FE ES+T VAEAVLRD++ VHLT+NHDKFNLLIFMLQKLYALVDQT APDN D LQNQE+
Sbjct: 309 FENESHTTVAEAVLRDYVFVHLTTNHDKFNLLIFMLQKLYALVDQTVAPDNPDALQNQEI 368
Query: 2449 LLPGHLITLFLKEKVMEWLRKSRRQLVDEIAKG-NNFNIKDVEQVKKVLQRGSSTIGKSV 2273
LLPGHLIT+++KEK +WL KSRRQL+DE+ K + V QV K L R ++++G+S+
Sbjct: 369 LLPGHLITIYVKEKFQDWLNKSRRQLLDELGKNEKKLDFSIVHQVVKFLNRNAASLGRSI 428
Query: 2272 ESMIKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLM 2093
ESMIKVGRL+T S +DLPQ+EGMT+QAERLNF RF+SHFR+VHRGA+F KMR T VRKL+
Sbjct: 429 ESMIKVGRLATSSGLDLPQREGMTIQAERLNFYRFLSHFRSVHRGASFTKMRITSVRKLL 488
Query: 2092 PESWGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMS 1913
PESWGFLCPVHTPDGEPCGLLNHMTSTCR++S+Y+SE K+KDF I+ SI VLV +GM+
Sbjct: 489 PESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYDSERKVKDFLKIRMSILTVLVGVGMT 548
Query: 1912 PLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVP 1733
PLLPKLE AGPPEVL VLLDG VVGSIA SEVE+ VAHIRSLKLS+ SGIP+DLEVGYVP
Sbjct: 549 PLLPKLERAGPPEVLHVLLDGCVVGSIASSEVEKAVAHIRSLKLSSLSGIPDDLEVGYVP 608
Query: 1732 LSLGGAYPGLYLFTSPSRFLRPVRNISHTA--NCNIELIGPFEQAFMEIRCADGGDGGRR 1559
LSLGG YPGLYLFTSPSRF+RPVRN+SH++ N NIELIGPFEQAFMEIRCADGG GGRR
Sbjct: 609 LSLGGTYPGLYLFTSPSRFIRPVRNVSHSSDNNLNIELIGPFEQAFMEIRCADGGHGGRR 668
Query: 1558 -SFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKA 1382
SFPATHEEIHPTG+LSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFS+QALQFR+DVK+
Sbjct: 669 QSFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQALQFRADVKS 728
Query: 1381 YHLQAPQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRG 1202
YHLQ PQSPIVRT Y+KYC+DEFPTGTNAIVAVLAY+GYDMEDAMILNKSSVDRGLCRG
Sbjct: 729 YHLQTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLCRG 788
Query: 1201 HIYQTETIDLAEKQEKSGPV-KIFARSNDKTMSSSIDSDGLPYIGQMINPKEPLYSTYDT 1025
HIYQTE+IDL + ++ V +IFARS+DKTM SSID+DGLPYIGQ+I+P EPLYS+Y+T
Sbjct: 789 HIYQTESIDLTKNHDREDQVLEIFARSSDKTMKSSIDTDGLPYIGQVIHPNEPLYSSYNT 848
Query: 1024 LTSMTKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRH 845
LTS+TKPTL+KG SK Y+ KVNIRTRR R PIIGDKFSSRH
Sbjct: 849 LTSVTKPTLLKG-----SEPVIVDYVSVDGATSKNYMQKVNIRTRRTRYPIIGDKFSSRH 903
Query: 844 GQKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFID 665
GQKGVCSQLWPDIDMPFS+VTGMRPDLIINPHAFPSRMTIGMLLESIAAK GSLHGKF+D
Sbjct: 904 GQKGVCSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVD 963
Query: 664 ATPFASSVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGP 485
ATPF +SVS++D + S+ SSLVDELGPMLAS+GFNYHG EVLYSG +GTE+TCEIFIGP
Sbjct: 964 ATPFQNSVSEKDEDGPSKASSLVDELGPMLASYGFNYHGVEVLYSGVFGTELTCEIFIGP 1023
Query: 484 VYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHD 305
VYYQRLRHMVSDKFQVRSTGTVD ITRQP+ GEMERDSVLAHGAAYLLHD
Sbjct: 1024 VYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDSVLAHGAAYLLHD 1083
Query: 304 RLHSCSDYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKNFTCHACKSKKGME 125
RLHSCSDYHIAEVCSFCG +LTA+VIQ QKR + EI G+P +TPK++TCHACK+ KGME
Sbjct: 1084 RLHSCSDYHIAEVCSFCGGVLTASVIQPQKRAIREIHGLPPARTPKSYTCHACKTSKGME 1143
Query: 124 TVAMPYVFRYLATELAAMNIRMELKLSNRAGC 29
TVAMPYVF+YLA ELAAMNI+MEL+LSNRAGC
Sbjct: 1144 TVAMPYVFKYLAAELAAMNIKMELRLSNRAGC 1175
>ref|XP_009414083.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Musa acuminata
subsp. malaccensis]
Length = 1169
Score = 1761 bits (4562), Expect = 0.0
Identities = 866/1164 (74%), Positives = 994/1164 (85%), Gaps = 6/1164 (0%)
Frame = -2
Query: 3505 DYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSP-KD 3329
D+ AL+ELF+PHIESFDYF+D+GLE A SIRPI+I DP T LR+ L +P+LL P +D
Sbjct: 8 DFQALQELFRPHIESFDYFLDEGLEKAFLSIRPIEISDPHTGIKLRVSLEKPQLLPPMRD 67
Query: 3328 ATSTRKIYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCHLRGA 3149
+ ++P ECR+A+ +Y+G V FQY+EG +R N+ FG LPIML SK CHLRGA
Sbjct: 68 GRLSEPLFPHECRQARISYKGEFRALVCFQYDEGVVVRENINFGHLPIMLKSKLCHLRGA 127
Query: 3148 EPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSDKAVI 2969
+PQKL+ HKEEATEMGGYFICNGLERL RLLI+ K+NYPMS+VRKS R RG GY DKAV+
Sbjct: 128 DPQKLVAHKEEATEMGGYFICNGLERLVRLLIIQKQNYPMSMVRKSFRNRGPGYGDKAVV 187
Query: 2968 MRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVSLTCC 2789
MRCVREDQSSV++KLYYL+NGSARLGFWI+GREFLLPVGIVLKALIDTNDHEI+VSLTCC
Sbjct: 188 MRCVREDQSSVTLKLYYLENGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIFVSLTCC 247
Query: 2788 YNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEGESYT 2609
YN+RYQR+KG V TQLIGERAQIILDEVR LSL+TRS+CL HIGEYF+PAM GFE ES+T
Sbjct: 248 YNDRYQREKGAVATQLIGERAQIILDEVRDLSLWTRSQCLKHIGEYFRPAMNGFETESHT 307
Query: 2608 VVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLI 2429
VAEAVLRD+I VHL SNHDKFNLLIF+LQKLYALVDQTAAPDN D LQNQE+LLPGHLI
Sbjct: 308 TVAEAVLRDYIFVHLASNHDKFNLLIFLLQKLYALVDQTAAPDNPDALQNQEILLPGHLI 367
Query: 2428 TLFLKEKVMEWLRKSRRQLVDEIA-KGNNFNIKDVEQVKKVLQRGSSTIGKSVESMIKVG 2252
T++LKE++ +WL+KS+RQL+DE A K N +IK++ QVKK R S+TIG+++ESM+K+G
Sbjct: 368 TIYLKERLQDWLKKSKRQLLDETAKKEKNIDIKNLTQVKKFFSRSSATIGRAIESMLKIG 427
Query: 2251 RLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPESWGFL 2072
RL+T S +DLPQ+EGM++QAERLNF R++SHFR+VHRGA+FAKMRTT VRKL+PESWGFL
Sbjct: 428 RLNTASGLDLPQREGMSIQAERLNFFRYLSHFRSVHRGASFAKMRTTSVRKLLPESWGFL 487
Query: 2071 CPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPLLPKLE 1892
CPV+TPDGEPCGLLNHMT CRV S+Y+SEG++KDF I+ SI VLV +GM+PLLPKLE
Sbjct: 488 CPVNTPDGEPCGLLNHMTCACRVASFYDSEGRVKDFLKIRMSILSVLVGIGMTPLLPKLE 547
Query: 1891 HAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLSLGGAY 1712
AGPPEVL VLLDG VVGSI+ ++EE VAHIR LKLS GIP DLEVGYVPLS GGAY
Sbjct: 548 RAGPPEVLHVLLDGCVVGSISSVKIEEAVAHIRRLKLSGICGIPEDLEVGYVPLSFGGAY 607
Query: 1711 PGLYLFTSPSRFLRPVRNISHT--ANCNIELIGPFEQAFMEIRCADGGDGGRRS-FPATH 1541
PGLY+FT+ SRF+RPV N+ + NIELIGPFEQAFMEIRC DGG+GGRR FPATH
Sbjct: 608 PGLYMFTNSSRFIRPVINLIQVTDGSKNIELIGPFEQAFMEIRCPDGGNGGRREFFPATH 667
Query: 1540 EEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYHLQAPQ 1361
EEIHPTG+LSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFS+QALQ+R+D+K+YHLQ PQ
Sbjct: 668 EEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQALQYRADLKSYHLQTPQ 727
Query: 1360 SPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYQTET 1181
SPIVRT Y+KYC+DEFPTGTNAIVAVLAY+GYDMEDAMILNKSSVDRGLCRGHIYQTE+
Sbjct: 728 SPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLCRGHIYQTES 787
Query: 1180 IDLAEKQEKSGP-VKIFARSNDKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTLTSMTKP 1004
IDLA K EK ++IFARSND+ + SSIDSDGLPY+GQ I+P EPLYSTY+TLTS+TKP
Sbjct: 788 IDLANKHEKEDRLLEIFARSNDRKLKSSIDSDGLPYVGQTIHPSEPLYSTYNTLTSITKP 847
Query: 1003 TLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHGQKGVCS 824
TL+KG SK Y+ KVNIRTRR R PIIGDKFSSRHGQKGVCS
Sbjct: 848 TLLKG-----SEDVIIDYVAVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCS 902
Query: 823 QLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFASS 644
Q+WPD+DMPFS+VTGMRPDLIINPHAFPSRMTIGMLLESIAAK GSLHGKF+DATPF+ S
Sbjct: 903 QMWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFSRS 962
Query: 643 VSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPVYYQRLR 464
V D +K S+ SS+VDELGPML S+GFNYHG EVLYSG YGTE+TCEIFIGPVYYQRLR
Sbjct: 963 VCNADEDKPSKSSSVVDELGPMLTSYGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLR 1022
Query: 463 HMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCSD 284
HMVSDKFQVRSTGTVD ITRQP+ GEMERD+VLAHGAAYLLHDRLHSCSD
Sbjct: 1023 HMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDAVLAHGAAYLLHDRLHSCSD 1082
Query: 283 YHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKNFTCHACKSKKGMETVAMPYV 104
YHIA+VCS+CGS+LTAT IQ QKR V EI G+P +TPKN+ C +CK+ KGMETVAMPYV
Sbjct: 1083 YHIADVCSYCGSVLTATAIQPQKRAVREIHGLPPARTPKNYICQSCKTGKGMETVAMPYV 1142
Query: 103 FRYLATELAAMNIRMELKLSNRAG 32
F+YLA ELAAMNI+MEL+LSN+AG
Sbjct: 1143 FKYLAAELAAMNIKMELQLSNQAG 1166
>ref|XP_010918458.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2
isoform X2 [Elaeis guineensis]
Length = 1150
Score = 1722 bits (4460), Expect = 0.0
Identities = 858/1172 (73%), Positives = 976/1172 (83%), Gaps = 13/1172 (1%)
Frame = -2
Query: 3505 DYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSP--- 3335
DY ALRELF+PHI+SF+YF+D+GLE AL SIRP++I DPS LRIY P++ P
Sbjct: 9 DYEALRELFRPHIDSFNYFLDEGLEKALLSIRPVEISDPSVGGKLRIYFENPQVFHPLRE 68
Query: 3334 -----KDATSTRKIYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSK 3170
T +YP ECR+A TTY+G V + QYN+ ++ + FG LPIML SK
Sbjct: 69 GRITKSKGGITEALYPHECRQAGTTYKGEFKVTICLQYNDQQPVQIPMNFGHLPIMLRSK 128
Query: 3169 RCHLRGAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDG 2990
CHL+ A+PQKLI+HKEEATEMGGYFICNGLERL RLLI+PKRNYPM ++R S R+RG G
Sbjct: 129 LCHLKDADPQKLIFHKEEATEMGGYFICNGLERLGRLLIVPKRNYPMGMIRSSFRSRGVG 188
Query: 2989 YSDKAVIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEI 2810
YSDKAV+MRCVREDQSSV+VKLYYLQNGSARLGFWI+GREFLLP+GIVLK
Sbjct: 189 YSDKAVVMRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPIGIVLK---------- 238
Query: 2809 YVSLTCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWG 2630
+G VG+Q+IGERAQIIL+EVR LSL T S+CL HIGEYF+PAM G
Sbjct: 239 ---------------RGAVGSQIIGERAQIILEEVRDLSLLTSSQCLKHIGEYFRPAMDG 283
Query: 2629 FEGESYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEV 2450
FE ES+T VAEAVLRD++ VHLT+NHDKFNLLIFMLQKLYALVDQT APDN D LQNQE+
Sbjct: 284 FENESHTTVAEAVLRDYVFVHLTTNHDKFNLLIFMLQKLYALVDQTVAPDNPDALQNQEI 343
Query: 2449 LLPGHLITLFLKEKVMEWLRKSRRQLVDEIAKGNN-FNIKDVEQVKKVLQRGSSTIGKSV 2273
LLPGHLIT+++KEK +WL KSRRQL+DE+ K + V QV K L R ++++G+S+
Sbjct: 344 LLPGHLITIYVKEKFQDWLNKSRRQLLDELGKNEKKLDFSIVHQVVKFLNRNAASLGRSI 403
Query: 2272 ESMIKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLM 2093
ESMIKVGRL+T S +DLPQ+EGMT+QAERLNF RF+SHFR+VHRGA+F KMR T VRKL+
Sbjct: 404 ESMIKVGRLATSSGLDLPQREGMTIQAERLNFYRFLSHFRSVHRGASFTKMRITSVRKLL 463
Query: 2092 PESWGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMS 1913
PESWGFLCPVHTPDGEPCGLLNHMTSTCR++S+Y+SE K+KDF I+ SI VLV +GM+
Sbjct: 464 PESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYDSERKVKDFLKIRMSILTVLVGVGMT 523
Query: 1912 PLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVP 1733
PLLPKLE AGPPEVL VLLDG VVGSIA SEVE+ VAHIRSLKLS+ SGIP+DLEVGYVP
Sbjct: 524 PLLPKLERAGPPEVLHVLLDGCVVGSIASSEVEKAVAHIRSLKLSSLSGIPDDLEVGYVP 583
Query: 1732 LSLGGAYPGLYLFTSPSRFLRPVRNISHTA--NCNIELIGPFEQAFMEIRCADGGDGGRR 1559
LSLGG YPGLYLFTSPSRF+RPVRN+SH++ N NIELIGPFEQAFMEIRCADGG GGRR
Sbjct: 584 LSLGGTYPGLYLFTSPSRFIRPVRNVSHSSDNNLNIELIGPFEQAFMEIRCADGGHGGRR 643
Query: 1558 -SFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKA 1382
SFPATHEEIHPTG+LSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFS+QALQFR+DVK+
Sbjct: 644 QSFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQALQFRADVKS 703
Query: 1381 YHLQAPQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRG 1202
YHLQ PQSPIVRT Y+KYC+DEFPTGTNAIVAVLAY+GYDMEDAMILNKSSVDRGLCRG
Sbjct: 704 YHLQTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLCRG 763
Query: 1201 HIYQTETIDLAEKQEKSGPV-KIFARSNDKTMSSSIDSDGLPYIGQMINPKEPLYSTYDT 1025
HIYQTE+IDL + ++ V +IFARS+DKTM SSID+DGLPYIGQ+I+P EPLYS+Y+T
Sbjct: 764 HIYQTESIDLTKNHDREDQVLEIFARSSDKTMKSSIDTDGLPYIGQVIHPNEPLYSSYNT 823
Query: 1024 LTSMTKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRH 845
LTS+TKPTL+KG K Y+ KVNIRTRR R PIIGDKFSSRH
Sbjct: 824 LTSVTKPTLLKGSEPVIVDYVSVDGATS-----KNYMQKVNIRTRRTRYPIIGDKFSSRH 878
Query: 844 GQKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFID 665
GQKGVCSQLWPDIDMPFS+VTGMRPDLIINPHAFPSRMTIGMLLESIAAK GSLHGKF+D
Sbjct: 879 GQKGVCSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVD 938
Query: 664 ATPFASSVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGP 485
ATPF +SVS++D + S+ SSLVDELGPMLAS+GFNYHG EVLYSG +GTE+TCEIFIGP
Sbjct: 939 ATPFQNSVSEKDEDGPSKASSLVDELGPMLASYGFNYHGVEVLYSGVFGTELTCEIFIGP 998
Query: 484 VYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHD 305
VYYQRLRHMVSDKFQVRSTGTVD ITRQP+ GEMERDSVLAHGAAYLLHD
Sbjct: 999 VYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDSVLAHGAAYLLHD 1058
Query: 304 RLHSCSDYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKNFTCHACKSKKGME 125
RLHSCSDYHIAEVCSFCG +LTA+VIQ QKR + EI G+P +TPK++TCHACK+ KGME
Sbjct: 1059 RLHSCSDYHIAEVCSFCGGVLTASVIQPQKRAIREIHGLPPARTPKSYTCHACKTSKGME 1118
Query: 124 TVAMPYVFRYLATELAAMNIRMELKLSNRAGC 29
TVAMPYVF+YLA ELAAMNI+MEL+LSNRAGC
Sbjct: 1119 TVAMPYVFKYLAAELAAMNIKMELRLSNRAGC 1150
>ref|XP_010918459.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2
isoform X3 [Elaeis guineensis]
Length = 1060
Score = 1681 bits (4354), Expect = 0.0
Identities = 827/1065 (77%), Positives = 933/1065 (87%), Gaps = 5/1065 (0%)
Frame = -2
Query: 3208 VGFGGLPIMLMSKRCHLRGAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPM 3029
+ FG LPIML SK CHL+ A+PQKLI+HKEEATEMGGYFICNGLERL RLLI+PKRNYPM
Sbjct: 1 MNFGHLPIMLRSKLCHLKDADPQKLIFHKEEATEMGGYFICNGLERLGRLLIVPKRNYPM 60
Query: 3028 SLVRKSLRARGDGYSDKAVIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGI 2849
++R S R+RG GYSDKAV+MRCVREDQSSV+VKLYYLQNGSARLGFWI+GREFLLP+GI
Sbjct: 61 GMIRSSFRSRGVGYSDKAVVMRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPIGI 120
Query: 2848 VLKALIDTNDHEIYVSLTCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECL 2669
VLKALIDT+D EI+VSLTCCYN+RYQ+ +G VG+Q+IGERAQIIL+EVR LSL T S+CL
Sbjct: 121 VLKALIDTSDREIFVSLTCCYNDRYQKQRGAVGSQIIGERAQIILEEVRDLSLLTSSQCL 180
Query: 2668 MHIGEYFQPAMWGFEGESYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTA 2489
HIGEYF+PAM GFE ES+T VAEAVLRD++ VHLT+NHDKFNLLIFMLQKLYALVDQT
Sbjct: 181 KHIGEYFRPAMDGFENESHTTVAEAVLRDYVFVHLTTNHDKFNLLIFMLQKLYALVDQTV 240
Query: 2488 APDNGDVLQNQEVLLPGHLITLFLKEKVMEWLRKSRRQLVDEIAKGNN-FNIKDVEQVKK 2312
APDN D LQNQE+LLPGHLIT+++KEK +WL KSRRQL+DE+ K + V QV K
Sbjct: 241 APDNPDALQNQEILLPGHLITIYVKEKFQDWLNKSRRQLLDELGKNEKKLDFSIVHQVVK 300
Query: 2311 VLQRGSSTIGKSVESMIKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAA 2132
L R ++++G+S+ESMIKVGRL+T S +DLPQ+EGMT+QAERLNF RF+SHFR+VHRGA+
Sbjct: 301 FLNRNAASLGRSIESMIKVGRLATSSGLDLPQREGMTIQAERLNFYRFLSHFRSVHRGAS 360
Query: 2131 FAKMRTTVVRKLMPESWGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQ 1952
F KMR T VRKL+PESWGFLCPVHTPDGEPCGLLNHMTSTCR++S+Y+SE K+KDF I+
Sbjct: 361 FTKMRITSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYDSERKVKDFLKIR 420
Query: 1951 KSIQYVLVRLGMSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSAS 1772
SI VLV +GM+PLLPKLE AGPPEVL VLLDG VVGSIA SEVE+ VAHIRSLKLS+
Sbjct: 421 MSILTVLVGVGMTPLLPKLERAGPPEVLHVLLDGCVVGSIASSEVEKAVAHIRSLKLSSL 480
Query: 1771 SGIPNDLEVGYVPLSLGGAYPGLYLFTSPSRFLRPVRNISHTA--NCNIELIGPFEQAFM 1598
SGIP+DLEVGYVPLSLGG YPGLYLFTSPSRF+RPVRN+SH++ N NIELIGPFEQAFM
Sbjct: 481 SGIPDDLEVGYVPLSLGGTYPGLYLFTSPSRFIRPVRNVSHSSDNNLNIELIGPFEQAFM 540
Query: 1597 EIRCADGGDGGRR-SFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF 1421
EIRCADGG GGRR SFPATHEEIHPTG+LSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF
Sbjct: 541 EIRCADGGHGGRRQSFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF 600
Query: 1420 SSQALQFRSDVKAYHLQAPQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMI 1241
S+QALQFR+DVK+YHLQ PQSPIVRT Y+KYC+DEFPTGTNAIVAVLAY+GYDMEDAMI
Sbjct: 601 SAQALQFRADVKSYHLQTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMI 660
Query: 1240 LNKSSVDRGLCRGHIYQTETIDLAEKQEKSGPV-KIFARSNDKTMSSSIDSDGLPYIGQM 1064
LNKSSVDRGLCRGHIYQTE+IDL + ++ V +IFARS+DKTM SSID+DGLPYIGQ+
Sbjct: 661 LNKSSVDRGLCRGHIYQTESIDLTKNHDREDQVLEIFARSSDKTMKSSIDTDGLPYIGQV 720
Query: 1063 INPKEPLYSTYDTLTSMTKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRV 884
I+P EPLYS+Y+TLTS+TKPTL+KG K Y+ KVNIRTRR
Sbjct: 721 IHPNEPLYSSYNTLTSVTKPTLLKGSEPVIVDYVSVDGATS-----KNYMQKVNIRTRRT 775
Query: 883 RNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESI 704
R PIIGDKFSSRHGQKGVCSQLWPDIDMPFS+VTGMRPDLIINPHAFPSRMTIGMLLESI
Sbjct: 776 RYPIIGDKFSSRHGQKGVCSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESI 835
Query: 703 AAKAGSLHGKFIDATPFASSVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGY 524
AAK GSLHGKF+DATPF +SVS++D + S+ SSLVDELGPMLAS+GFNYHG EVLYSG
Sbjct: 836 AAKGGSLHGKFVDATPFQNSVSEKDEDGPSKASSLVDELGPMLASYGFNYHGVEVLYSGV 895
Query: 523 YGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERD 344
+GTE+TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVD ITRQP+ GEMERD
Sbjct: 896 FGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERD 955
Query: 343 SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKN 164
SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCG +LTA+VIQ QKR + EI G+P +TPK+
Sbjct: 956 SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGGVLTASVIQPQKRAIREIHGLPPARTPKS 1015
Query: 163 FTCHACKSKKGMETVAMPYVFRYLATELAAMNIRMELKLSNRAGC 29
+TCHACK+ KGMETVAMPYVF+YLA ELAAMNI+MEL+LSNRAGC
Sbjct: 1016 YTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMELRLSNRAGC 1060
>ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X2
[Vitis vinifera] gi|731414307|ref|XP_010659084.1|
PREDICTED: DNA-directed RNA polymerase I subunit RPA2
isoform X2 [Vitis vinifera]
Length = 1169
Score = 1622 bits (4200), Expect = 0.0
Identities = 810/1169 (69%), Positives = 942/1169 (80%), Gaps = 10/1169 (0%)
Frame = -2
Query: 3508 PDYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSPKD 3329
PDY LRELF+ HI+SFD+ ++ GLE L S++P+++ D T LRI+ G+P L P+
Sbjct: 6 PDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKLRIWFGQPELYPPQK 65
Query: 3328 ATSTRK----IYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCH 3161
S R +YP ECR+AK +Y G L +V FQY G AIR G PIML SK CH
Sbjct: 66 ERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKLCH 125
Query: 3160 LRGAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSD 2981
LRGA+PQKL+ KEE++EMGGYFI NGLER+ RLLILPKRNYPMS+VR S R R +GY+D
Sbjct: 126 LRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTD 185
Query: 2980 KAVIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVS 2801
KAV++RCVREDQS+V+VKLYYL+NGSARLGFWI+GRE+LLPVG+VLKALIDT DHEIY S
Sbjct: 186 KAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYES 245
Query: 2800 LTCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEG 2621
LTCCY+E+Y+ KG VGTQL+GER +IILDEVR LSLFTR +CL HIGE+FQ M G E
Sbjct: 246 LTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLEN 305
Query: 2620 ESYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLP 2441
ESY++VA+AVLR++I VHL +N+DKFNLLIFM+QKL++L+DQT+ PDN DVLQNQEVLLP
Sbjct: 306 ESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLP 365
Query: 2440 GHLITLFLKEKVMEWLRKSRRQLVDEIAKGNNFNIKDVEQVKKVLQRG-SSTIGKSVESM 2264
GHLIT++LKEK+ EWL K+RR L DEI K NF + VKKV+ + S I +VE+M
Sbjct: 366 GHLITIYLKEKLQEWLYKARRLLQDEINKRKNFEFSSLAHVKKVMDKNPSRQISLAVENM 425
Query: 2263 IKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPES 2084
+K GRL T S +DL Q+ GMTVQAERLNFLRF+SHFRAVHRGA+FA +RTT VRKL+PE+
Sbjct: 426 LKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEA 485
Query: 2083 WGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPLL 1904
WGFLCPVHTPDGEPCGLLNHM STCR+TSY++S G +DF I+ SI VL+ +GM+P L
Sbjct: 486 WGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPAL 545
Query: 1903 PKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLSL 1724
PKL AGPPEVL V+LDGRVVGSI SEVE V H+R LK+SA S IP+DLEVGY+PLS+
Sbjct: 546 PKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSM 605
Query: 1723 GGAYPGLYLFTSPSRFLRPVRNIS--HTANCNIELIGPFEQAFMEIRCADGGDGGRRS-F 1553
GGAYPGLYLFTSPSRF+RPVRNIS +IELIGPFEQ +MEIRC DG DGGRR+ F
Sbjct: 606 GGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIF 665
Query: 1552 PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYHL 1373
PATHEEIHPTGMLSVVA+LTPWSDHNQSPRNMYQCQM KQTM FSSQA+ R+D K YHL
Sbjct: 666 PATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYHL 725
Query: 1372 QAPQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIY 1193
Q PQ+PIVRT+ Y KY +DEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLC G IY
Sbjct: 726 QTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIY 785
Query: 1192 QTETIDLAEKQEKSG-PVKIFARSN-DKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTLT 1019
QTETIDL+++ KS ++F RSN DK+ +S IDSDGLPY+GQMINP EP S Y+ +T
Sbjct: 786 QTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEVT 845
Query: 1018 SMTKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHGQ 839
S T+ T +KG +KK+ KVNIR RR RNPIIGDKFSSRHGQ
Sbjct: 846 SSTRATKLKG------SEPVIVDYVALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQ 899
Query: 838 KGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDAT 659
KGVCSQLWPDIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAK GSLHGKF+DAT
Sbjct: 900 KGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDAT 959
Query: 658 PFASSVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPVY 479
PF+ S+ K +G SE SSLVDELG ML S+GFNYHG EVLYSG+YGTE+TCEIFIGPVY
Sbjct: 960 PFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVY 1019
Query: 478 YQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRL 299
YQRLRHMVSDKFQVRSTGTVD +TRQP+ GEMERDS+LAHGAAYLLHDRL
Sbjct: 1020 YQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRL 1079
Query: 298 HSCSDYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKNFTCHACKSKKGMETV 119
H+CSD+HIA+VCS CGSILT ++IQ QKR V EI G+P + PK TCHAC++ KGMETV
Sbjct: 1080 HTCSDHHIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETV 1139
Query: 118 AMPYVFRYLATELAAMNIRMELKLSNRAG 32
+MPY+FR+LA ELAAMNI+M L+LSN AG
Sbjct: 1140 SMPYIFRFLAAELAAMNIKMTLQLSNGAG 1168
>ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
[Vitis vinifera]
Length = 1178
Score = 1622 bits (4200), Expect = 0.0
Identities = 810/1169 (69%), Positives = 942/1169 (80%), Gaps = 10/1169 (0%)
Frame = -2
Query: 3508 PDYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSPKD 3329
PDY LRELF+ HI+SFD+ ++ GLE L S++P+++ D T LRI+ G+P L P+
Sbjct: 15 PDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKLRIWFGQPELYPPQK 74
Query: 3328 ATSTRK----IYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCH 3161
S R +YP ECR+AK +Y G L +V FQY G AIR G PIML SK CH
Sbjct: 75 ERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKLCH 134
Query: 3160 LRGAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSD 2981
LRGA+PQKL+ KEE++EMGGYFI NGLER+ RLLILPKRNYPMS+VR S R R +GY+D
Sbjct: 135 LRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTD 194
Query: 2980 KAVIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVS 2801
KAV++RCVREDQS+V+VKLYYL+NGSARLGFWI+GRE+LLPVG+VLKALIDT DHEIY S
Sbjct: 195 KAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYES 254
Query: 2800 LTCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEG 2621
LTCCY+E+Y+ KG VGTQL+GER +IILDEVR LSLFTR +CL HIGE+FQ M G E
Sbjct: 255 LTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLEN 314
Query: 2620 ESYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLP 2441
ESY++VA+AVLR++I VHL +N+DKFNLLIFM+QKL++L+DQT+ PDN DVLQNQEVLLP
Sbjct: 315 ESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLP 374
Query: 2440 GHLITLFLKEKVMEWLRKSRRQLVDEIAKGNNFNIKDVEQVKKVLQRG-SSTIGKSVESM 2264
GHLIT++LKEK+ EWL K+RR L DEI K NF + VKKV+ + S I +VE+M
Sbjct: 375 GHLITIYLKEKLQEWLYKARRLLQDEINKRKNFEFSSLAHVKKVMDKNPSRQISLAVENM 434
Query: 2263 IKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPES 2084
+K GRL T S +DL Q+ GMTVQAERLNFLRF+SHFRAVHRGA+FA +RTT VRKL+PE+
Sbjct: 435 LKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEA 494
Query: 2083 WGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPLL 1904
WGFLCPVHTPDGEPCGLLNHM STCR+TSY++S G +DF I+ SI VL+ +GM+P L
Sbjct: 495 WGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPAL 554
Query: 1903 PKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLSL 1724
PKL AGPPEVL V+LDGRVVGSI SEVE V H+R LK+SA S IP+DLEVGY+PLS+
Sbjct: 555 PKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSM 614
Query: 1723 GGAYPGLYLFTSPSRFLRPVRNIS--HTANCNIELIGPFEQAFMEIRCADGGDGGRRS-F 1553
GGAYPGLYLFTSPSRF+RPVRNIS +IELIGPFEQ +MEIRC DG DGGRR+ F
Sbjct: 615 GGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIF 674
Query: 1552 PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYHL 1373
PATHEEIHPTGMLSVVA+LTPWSDHNQSPRNMYQCQM KQTM FSSQA+ R+D K YHL
Sbjct: 675 PATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYHL 734
Query: 1372 QAPQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIY 1193
Q PQ+PIVRT+ Y KY +DEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLC G IY
Sbjct: 735 QTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIY 794
Query: 1192 QTETIDLAEKQEKSG-PVKIFARSN-DKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTLT 1019
QTETIDL+++ KS ++F RSN DK+ +S IDSDGLPY+GQMINP EP S Y+ +T
Sbjct: 795 QTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEVT 854
Query: 1018 SMTKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHGQ 839
S T+ T +KG +KK+ KVNIR RR RNPIIGDKFSSRHGQ
Sbjct: 855 SSTRATKLKG------SEPVIVDYVALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQ 908
Query: 838 KGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDAT 659
KGVCSQLWPDIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAK GSLHGKF+DAT
Sbjct: 909 KGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDAT 968
Query: 658 PFASSVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPVY 479
PF+ S+ K +G SE SSLVDELG ML S+GFNYHG EVLYSG+YGTE+TCEIFIGPVY
Sbjct: 969 PFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVY 1028
Query: 478 YQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRL 299
YQRLRHMVSDKFQVRSTGTVD +TRQP+ GEMERDS+LAHGAAYLLHDRL
Sbjct: 1029 YQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRL 1088
Query: 298 HSCSDYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKNFTCHACKSKKGMETV 119
H+CSD+HIA+VCS CGSILT ++IQ QKR V EI G+P + PK TCHAC++ KGMETV
Sbjct: 1089 HTCSDHHIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETV 1148
Query: 118 AMPYVFRYLATELAAMNIRMELKLSNRAG 32
+MPY+FR+LA ELAAMNI+M L+LSN AG
Sbjct: 1149 SMPYIFRFLAAELAAMNIKMTLQLSNGAG 1177
>ref|XP_012698556.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
RPA2 [Setaria italica]
Length = 1179
Score = 1599 bits (4141), Expect = 0.0
Identities = 790/1165 (67%), Positives = 948/1165 (81%), Gaps = 8/1165 (0%)
Frame = -2
Query: 3505 DYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSP-KD 3329
DYAAL+ELF+PH+ESFD F+D GL+ L+ IRP++I DP+++ L+I L + ++L P +D
Sbjct: 14 DYAALKELFRPHVESFDSFLDVGLDEMLRGIRPMEIKDPNSSAILKITLEKGQVLPPMRD 73
Query: 3328 ATSTRKIYPQECREAKTTYRGHLSVEVFFQYNE-GPAIRHNVGFGGLPIMLMSKRCHLRG 3152
+YPQECR+A+TTY G V+V Q NE G IRH FG LPIMLMSK CHLR
Sbjct: 74 GRLGVPLYPQECRQARTTYHGEFKVDVCLQCNEDGAQIRHTFNFGHLPIMLMSKLCHLRD 133
Query: 3151 AEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSDKAV 2972
A+P KL++H EEATEMGGYFIC G+ERL R+LIL KRNYPM LVR S RG GY+DKAV
Sbjct: 134 ADPHKLVFHGEEATEMGGYFICGGMERLIRILILQKRNYPMGLVRGSFVKRGAGYTDKAV 193
Query: 2971 IMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVSLTC 2792
++RCV DQSSV++KLYYLQNGSARLGFW+ GREFLLPVGIVLKALIDT+D EI+ SLTC
Sbjct: 194 VIRCVHSDQSSVTIKLYYLQNGSARLGFWLGGREFLLPVGIVLKALIDTSDREIFTSLTC 253
Query: 2791 CYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEGESY 2612
CY+++Y R KG V TQLIGERAQIILDEVR LSL TR +CL+HIG+YF+ M GFE Y
Sbjct: 254 CYSDKYGRGKGVVSTQLIGERAQIILDEVRDLSLLTRMQCLVHIGKYFRSVMEGFEHYDY 313
Query: 2611 TVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHL 2432
VA+AVL+D+I VHL +NHDKFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPGHL
Sbjct: 314 ETVAKAVLKDYIFVHLENNHDKFNLLIFMLQKLYALVDQTASPDNADALQFQEALLPGHL 373
Query: 2431 ITLFLKEKVMEWLRKSRRQLVDEIAKGNNFNIKDVEQVKKVLQRGSSTIGKSVESMIKVG 2252
IT+FLK+++ +WLRKS+R +++E K +F++ + +V+K L + ++ +G+++ESMIK+G
Sbjct: 374 ITIFLKDRLQDWLRKSKRLIIEEATKNKSFDLNNALEVRKFLTKHTTFVGRAIESMIKIG 433
Query: 2251 RLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPESWGFL 2072
++++ S +DLPQ++GMT+ AERLNF R+ISHFR+VHRG+AFAKMRTT VRKL+PESWGFL
Sbjct: 434 KVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGSAFAKMRTTSVRKLLPESWGFL 493
Query: 2071 CPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPLLPKLE 1892
CPVHTPDGEPCGLLNHMTSTCR++S YNSEG +KDF I+KS+ + LVR+GM+P+LPK+E
Sbjct: 494 CPVHTPDGEPCGLLNHMTSTCRISSVYNSEGVVKDFGKIKKSLSFELVRVGMNPVLPKIE 553
Query: 1891 HAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLSLGGAY 1712
GPPEVL V LDG ++G+IA + +EE V ++R LKL A SGIP DLEVGYVPLSLGGAY
Sbjct: 554 RTGPPEVLHVHLDGCILGTIASARIEEAVNYLRMLKLLAHSGIPEDLEVGYVPLSLGGAY 613
Query: 1711 PGLYLFTSPSRFLRPVRNI--SHTANCNIELIGPFEQAFMEIRCADGGDGGRR-SFPATH 1541
PGLYLFT+P+RF+RPV+++ +IELIGPFEQAFMEIRC DGGDGGR+ FPATH
Sbjct: 614 PGLYLFTNPARFVRPVKSLFGLPDGKQSIELIGPFEQAFMEIRCPDGGDGGRKEKFPATH 673
Query: 1540 EEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYHLQAPQ 1361
EEIHPT +LSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF QAL+FR+DVKA+HLQ PQ
Sbjct: 674 EEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQ 733
Query: 1360 SPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYQTET 1181
+PIVRT Y KYC+DEFP+GTNAIVAVLAY+GYDMEDAMILNKS+VDRG+ RGHIYQTE
Sbjct: 734 TPIVRTATYGKYCMDEFPSGTNAIVAVLAYTGYDMEDAMILNKSAVDRGMFRGHIYQTEC 793
Query: 1180 IDLAEKQEKSGPVKIFARS-NDKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTLTSMTKP 1004
IDL++K ++ P +IFA+S + S++IDSDGLP +GQ ++P E YS Y+ LT +P
Sbjct: 794 IDLSKKNRENVP-EIFAKSVLSRDTSTAIDSDGLPRLGQTVHPNEQYYSVYNRLTGAIRP 852
Query: 1003 TLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHGQKGVCS 824
+KG SK K NIR RRVRNPIIGDKFSSRHGQKGVCS
Sbjct: 853 VRLKG-----TEPAFIDYVAVNGASSKGDFQKANIRLRRVRNPIIGDKFSSRHGQKGVCS 907
Query: 823 QLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFASS 644
QLWPDIDMPFS+ TGMRPDLIINPHAFPSRMTI MLLES+AAKAGSLHGKF+DATPFASS
Sbjct: 908 QLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESMAAKAGSLHGKFMDATPFASS 967
Query: 643 VSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPVYYQRLR 464
V KE G S+VDELGPMLAS+GFNYHG+E LYSG++GTEM CEIFIGPVYYQRLR
Sbjct: 968 VKKE-GKDPRNXDSIVDELGPMLASYGFNYHGTETLYSGFFGTEMDCEIFIGPVYYQRLR 1026
Query: 463 HMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCSD 284
HMVSDKFQVR+TG +D ITRQP+ GEMERD++LAHG++YLLHDRLHSCSD
Sbjct: 1027 HMVSDKFQVRTTGRIDQITRQPIGGRKHGGGIRFGEMERDALLAHGSSYLLHDRLHSCSD 1086
Query: 283 YHIAEVCSFCGSILTATVIQQ--QKRVVPEIRGVPQTKTPKNFTCHACKSKKGMETVAMP 110
YHIA+VCSFCGS+LTATVI+ QK+ E+ G+P + KNF C ACK+ KGMETVAMP
Sbjct: 1087 YHIADVCSFCGSLLTATVIKSDTQKKAKREMLGLPTVRPQKNFACQACKTSKGMETVAMP 1146
Query: 109 YVFRYLATELAAMNIRMELKLSNRA 35
YVFRYLA ELAAMNI++EL+LSN++
Sbjct: 1147 YVFRYLAAELAAMNIKLELRLSNKS 1171
>ref|XP_008664805.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa2 [Zea mays]
Length = 1178
Score = 1596 bits (4133), Expect = 0.0
Identities = 786/1167 (67%), Positives = 954/1167 (81%), Gaps = 9/1167 (0%)
Frame = -2
Query: 3505 DYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSPKDA 3326
DY+ALRELF+PH+ESFDYF+DKGL+ ++SIRP+ I DP+++ L+I L + +LSP
Sbjct: 17 DYSALRELFRPHVESFDYFLDKGLDEMIESIRPMVIRDPNSSNTLKIILEKGHVLSPMRG 76
Query: 3325 T--STRKIYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCHLRG 3152
IYPQECR+A+ +Y G VEV FQYNEG IRH FG LPIMLMSK CHLRG
Sbjct: 77 ARPGVLPIYPQECRQARISYHGEFKVEVCFQYNEGAQIRHTFNFGHLPIMLMSKLCHLRG 136
Query: 3151 AEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSDKAV 2972
A+P KL++H EEATEMGGYFIC G+ERL R+L+L KRNYPM LVR S RG GY+DKAV
Sbjct: 137 ADPHKLVFHGEEATEMGGYFICGGMERLVRILVLQKRNYPMGLVRNSFLKRGAGYTDKAV 196
Query: 2971 IMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVSLTC 2792
++RCV+ DQSSV++KLYY+ NGSARLGFW+ GREFLLPVGIVLKALID +D EI+ SLTC
Sbjct: 197 VIRCVQRDQSSVTIKLYYILNGSARLGFWLGGREFLLPVGIVLKALIDASDREIFTSLTC 256
Query: 2791 CYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEGESY 2612
CY++++ R KG V TQLIGERAQI+LDEVR LS+ TR++CL+HIG+YF+ M GFE + Y
Sbjct: 257 CYSDKHGRGKGVVSTQLIGERAQIVLDEVRNLSILTRTQCLVHIGQYFRSVMEGFENDDY 316
Query: 2611 TVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHL 2432
VAEAVL+D+I VHL +NHDKFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPGHL
Sbjct: 317 ITVAEAVLKDYIFVHLENNHDKFNLLIFMLQKLYALVDQTASPDNPDALQYQEALLPGHL 376
Query: 2431 ITLFLKEKVMEWLRKSRRQLVDEIAKGNNFNIKDVEQVKKVLQRGSSTIGKSVESMIKVG 2252
T+FLK+++ EWLRKS+R +++E AK F++ + +++K L + ++++G++VESMIKVG
Sbjct: 377 FTVFLKDRLQEWLRKSKRLILEEAAKNKGFDLGNALEIRKFLTKYTTSVGRAVESMIKVG 436
Query: 2251 RLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPESWGFL 2072
+++ S +DLPQ+EGMT+ AERLNF R+ISHFR+VHRG+AFAKMRTT VRKL+PESWGFL
Sbjct: 437 NVNSRSGLDLPQREGMTIHAERLNFHRYISHFRSVHRGSAFAKMRTTSVRKLLPESWGFL 496
Query: 2071 CPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPLLPKLE 1892
CPVHTPDGEPCGLLNHMTSTCRV+S+YNSEG IK+F +++K + LVR+GM+P+LPK+E
Sbjct: 497 CPVHTPDGEPCGLLNHMTSTCRVSSFYNSEGVIKNFGEMKKLLSAELVRVGMNPVLPKIE 556
Query: 1891 HAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLSLGGAY 1712
GPPEVL V LDG ++G+IA + +E+ V ++R+LKL A SGIP DLEVGYVP S GA+
Sbjct: 557 QTGPPEVLHVHLDGCILGTIASAMIEKAVNYLRTLKLLAHSGIPEDLEVGYVPPSFNGAF 616
Query: 1711 PGLYLFTSPSRFLRPVRN--ISHTANCNIELIGPFEQAFMEIRCADGGDGGRRS-FPATH 1541
PGLYLFT+P+RF+RPVRN I +IELIGPFEQAFMEIRC DGGDGGR+ FPATH
Sbjct: 617 PGLYLFTNPARFVRPVRNLFILSDGKQSIELIGPFEQAFMEIRCPDGGDGGRQEPFPATH 676
Query: 1540 EEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYHLQAPQ 1361
EEIHPT +LSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF QAL+FR+DVKA+HLQ PQ
Sbjct: 677 EEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQ 736
Query: 1360 SPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYQTET 1181
+PIVRT Y KYC+DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+V+RG+ RGHIYQTE
Sbjct: 737 TPIVRTGTYTKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVERGMFRGHIYQTEC 796
Query: 1180 IDLAEKQEKSGPVKIFARS-NDKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTLTSMTKP 1004
IDL+ K + P + FA+S + S+ IDSDGLP +GQ ++P E YS +++LT++ +P
Sbjct: 797 IDLSTKSRDNVP-ETFAKSILTRDTSNVIDSDGLPRLGQAVHPNEQYYSVHNSLTNVIRP 855
Query: 1003 TLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHGQKGVCS 824
+KG SK + K NIR RRVRNPIIGDKFSSRHGQKGVCS
Sbjct: 856 VKLKG-----TEPAFIDYVAVNGTGSKCGLQKANIRLRRVRNPIIGDKFSSRHGQKGVCS 910
Query: 823 QLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFASS 644
QLWPDIDMPFS+ TGMRPDLIINPHAFPSRMTI MLLES+AAKAGSLHGKFIDATPFA+S
Sbjct: 911 QLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESMAAKAGSLHGKFIDATPFANS 970
Query: 643 VSKEDGNKHSER-SSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPVYYQRL 467
+ K+ K S++ +S+VDELGPMLAS+GFNYHG+EVLYSG +GTEM CEIFIGPVYYQRL
Sbjct: 971 LKKD---KDSDKPNSIVDELGPMLASYGFNYHGNEVLYSGVFGTEMDCEIFIGPVYYQRL 1027
Query: 466 RHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCS 287
RHMVSDKFQVR+TG +D ITRQP+ GEMERD++LAHG++YLLHDRLHSCS
Sbjct: 1028 RHMVSDKFQVRTTGRIDQITRQPIGGRKHGGGIRFGEMERDALLAHGSSYLLHDRLHSCS 1087
Query: 286 DYHIAEVCSFCGSILTATVIQQ--QKRVVPEIRGVPQTKTPKNFTCHACKSKKGMETVAM 113
DYHIA+VCSFCGS+LTAT+I+ QK+V E+ G+P + KNF C ACK+ KGMETVAM
Sbjct: 1088 DYHIADVCSFCGSLLTATMIKSDTQKKVKHEMLGLPTVRPAKNFACQACKTSKGMETVAM 1147
Query: 112 PYVFRYLATELAAMNIRMELKLSNRAG 32
PYVFRYLA ELAAMNI++EL+LSN++G
Sbjct: 1148 PYVFRYLAAELAAMNIKLELRLSNKSG 1174
>ref|XP_010067710.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2
isoform X1 [Eucalyptus grandis]
gi|629100116|gb|KCW65881.1| hypothetical protein
EUGRSUZ_G03213 [Eucalyptus grandis]
Length = 1173
Score = 1588 bits (4111), Expect = 0.0
Identities = 791/1169 (67%), Positives = 932/1169 (79%), Gaps = 11/1169 (0%)
Frame = -2
Query: 3505 DYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSPK-- 3332
DY ALRELF+ HIESFD+ +D+GLE L I+P+QIFDPS++ L+I+ +P + P+
Sbjct: 10 DYGALRELFRHHIESFDHLVDRGLETMLDKIKPVQIFDPSSDKTLKIWFAKPEVYQPQKE 69
Query: 3331 --DATSTRKIYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCHL 3158
TS + P ECR+AKT+Y G V ++FQY++ A+ FG LPIML SK C+L
Sbjct: 70 GSSKTSHDALLPFECRQAKTSYAGKFVVHLYFQYDDKVAVHEKFNFGHLPIMLKSKLCYL 129
Query: 3157 RGAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSDK 2978
GA+PQKL+ KEE++EMGGYFI NGLER+ RLLILPKRNYPMS+VR S R R +GY+DK
Sbjct: 130 NGADPQKLVSWKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTDK 189
Query: 2977 AVIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVSL 2798
AV++RCVREDQSSV+VKLYYLQNGSARLGFWI+ RE+LLPVG+VLKALIDTNDHEIY SL
Sbjct: 190 AVVIRCVREDQSSVTVKLYYLQNGSARLGFWIQAREYLLPVGVVLKALIDTNDHEIYSSL 249
Query: 2797 TCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEGE 2618
T CY+E+Y R KG VG QL+ ERA+IILDE+R L+LFTR +CL HIGE+FQP M G E E
Sbjct: 250 TSCYSEKYGRGKGVVGNQLVSERAKIILDELRDLTLFTRRQCLQHIGEHFQPVMDGLENE 309
Query: 2617 SYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPG 2438
S+ VA AVL+D+I VHL +N+DKFNLLIFM+QKL++L+DQT++PDN D LQNQEVLLPG
Sbjct: 310 SFISVANAVLQDYIFVHLNNNYDKFNLLIFMVQKLFSLIDQTSSPDNPDSLQNQEVLLPG 369
Query: 2437 HLITLFLKEKVMEWLRKSRRQLVDEIA-KGNNFNIKDVEQVKKVLQRG-SSTIGKSVESM 2264
HLIT++LK+K+ +WL+K+++ L DE+ K NF+ + VKKV+ + IG ++E+M
Sbjct: 370 HLITIYLKDKLEDWLQKAKKLLQDELKNKAKNFDFSSLAHVKKVMDKNPGRQIGSAIENM 429
Query: 2263 IKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPES 2084
+K GRL T S +DL Q+ G TVQAERLNFLRF+SHFRAVHRGA+FA +RTT VRKL+PES
Sbjct: 430 LKTGRLVTQSGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 489
Query: 2083 WGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPLL 1904
WGFLCPVHTPDGEPCGLLNHMT TCR+TS+++S+G +DF I+ SI VL+ +GM+P L
Sbjct: 490 WGFLCPVHTPDGEPCGLLNHMTCTCRITSFFDSKGNFRDFVKIRTSILNVLIGIGMTPSL 549
Query: 1903 PKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLSL 1724
PK+ AGPP+VL VLLDGRVVGSI +EVE+ V+++R LKLS +SGIP+DLEVGYVPLS
Sbjct: 550 PKIVQAGPPDVLSVLLDGRVVGSIPSAEVEKAVSYLRRLKLSTTSGIPDDLEVGYVPLSF 609
Query: 1723 GGAYPGLYLFTSPSRFLRPVRNISH--TANCNIELIGPFEQAFMEIRCADGGDGGRRS-F 1553
GGAYPGLYLFT+PSRF RPVRNIS + NIELIGPFEQ FMEIRC DGGDGGRR+ F
Sbjct: 610 GGAYPGLYLFTNPSRFARPVRNISAPVDGSQNIELIGPFEQVFMEIRCPDGGDGGRRNEF 669
Query: 1552 PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYHL 1373
PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTM FSSQA+ FR+D K YHL
Sbjct: 670 PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIHFRADQKLYHL 729
Query: 1372 QAPQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIY 1193
Q PQ+PIVRT Y KYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSV+RG+ G IY
Sbjct: 730 QTPQTPIVRTGAYTKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGQIY 789
Query: 1192 QTETIDLAEKQEKSG-PVKIFARSN-DKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTLT 1019
QTETIDL+E+ KS ++F RSN DK+ IDSDGLPY+GQMI P EP S Y+ +T
Sbjct: 790 QTETIDLSEQSSKSDREQRMFRRSNTDKSAHPWIDSDGLPYVGQMIRPNEPYCSVYNEVT 849
Query: 1018 SMTKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHGQ 839
+ TK L KG +KK + K NIR R RNP+IGDKFSSRHGQ
Sbjct: 850 TTTKNHLRKG------SESAIVDYVAVDTKTKKGLQKANIRFRHPRNPVIGDKFSSRHGQ 903
Query: 838 KGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDAT 659
KGVCSQLWPD+DMPFS +TGMRPDLIINPHAFPSRMTI MLLESIAAK GSL G+F+DAT
Sbjct: 904 KGVCSQLWPDVDMPFSGITGMRPDLIINPHAFPSRMTIAMLLESIAAKVGSLDGEFVDAT 963
Query: 658 PFASSVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPVY 479
PFASS K +G + SE LVD++G L GFNYHG EVLYSG YGTE+TCEIFIGPVY
Sbjct: 964 PFASSTKKANGEEKSESELLVDQIGAKLRKKGFNYHGVEVLYSGVYGTELTCEIFIGPVY 1023
Query: 478 YQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRL 299
YQRLRHMVSDKFQVRSTGTVD +TRQP+ GEMERDS++AHGAAYLLHDRL
Sbjct: 1024 YQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMVAHGAAYLLHDRL 1083
Query: 298 HSCSDYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKNFTCHACKSKKGMETV 119
H+CSDYHIA+VCS CGSILT +Q Q+R EI G+P + PK TCHAC++ +GMETV
Sbjct: 1084 HTCSDYHIADVCSLCGSILTTQFVQPQRRPGREIGGLPPIRAPKKVTCHACQTSRGMETV 1143
Query: 118 AMPYVFRYLATELAAMNIRMELKLSNRAG 32
AMPYVFRYLA ELAAMNI+M L LSN AG
Sbjct: 1144 AMPYVFRYLAAELAAMNIKMTLHLSNGAG 1172
>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
[Glycine max]
Length = 1175
Score = 1578 bits (4086), Expect = 0.0
Identities = 792/1170 (67%), Positives = 935/1170 (79%), Gaps = 11/1170 (0%)
Frame = -2
Query: 3508 PDYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSPK- 3332
PD+ ALRELFK HIESFDY +D GL+ L I+P+++FD T+T LRI+L P L P+
Sbjct: 9 PDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQK 68
Query: 3331 ---DATSTRKIYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCH 3161
T + P ECR+AK +Y G ++++V FQYN+GP IR NV FG PIML SK C+
Sbjct: 69 ERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCN 128
Query: 3160 LRGAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSD 2981
LRGA+PQKL+ +KEEA+EMGGYFI NGLER+ RLLILPKRNYPMS+VR S R +GY+D
Sbjct: 129 LRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTD 188
Query: 2980 KAVIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVS 2801
KAV++RCVR DQSS+SV+LYYL+NGSARLGFW++GRE+LLPVGI+LKALIDT D EIYV+
Sbjct: 189 KAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248
Query: 2800 LTCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEG 2621
LT CYNE+Y++ KG VGTQL+GERA+IILDE+R LSLFTR +CL +IGE+FQP M +
Sbjct: 249 LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKN 308
Query: 2620 ESYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLP 2441
+SY +VA+AVL+D ILVHL +N DKFNLLIFMLQKL++L+DQT+ PDN D LQN EVLLP
Sbjct: 309 DSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368
Query: 2440 GHLITLFLKEKVMEWLRKSRRQLVDEI-AKGNNFNIKDVEQVKKVLQRGS-STIGKSVES 2267
GHLITL+LKEK+ +WL+K RR L+DEI K F+ D+ QVKKV+ + S + +VE+
Sbjct: 369 GHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428
Query: 2266 MIKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPE 2087
M+K GRL T + +DL Q+ G TVQAERLNFLRF+SHFRAVHRGA+FA +RTT VRKL+PE
Sbjct: 429 MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPE 488
Query: 2086 SWGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPL 1907
SWGFLCPVHTPDGEPCGLLNHMT T R+TS+++S+G IKD+ I+ SI VL+ +GM+P
Sbjct: 489 SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPS 548
Query: 1906 LPKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLS 1727
LPK+ GPPE L VLLDG VVG IA SEVE+VVAHIR LK+S+ + IP+D+EVGYVPLS
Sbjct: 549 LPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLS 608
Query: 1726 LGGAYPGLYLFTSPSRFLRPVRNISHTANC--NIELIGPFEQAFMEIRCADGGDGGRR-S 1556
+GGAYPGLYL TSPSRF+RPVRNIS ++ NIELIGPFEQ FMEIRC DGGDGGR+ S
Sbjct: 609 MGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSS 668
Query: 1555 FPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYH 1376
FPATHEEIHPT MLSVVANLTPWSDHNQSPRNMYQCQMAKQTM FSSQ +Q R+D K YH
Sbjct: 669 FPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728
Query: 1375 LQAPQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHI 1196
LQ PQ+PIVRT+ Y KY IDEFPTGTNAIVAVLAY+GYDMEDAMILNKSSV+RG+ G I
Sbjct: 729 LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 788
Query: 1195 YQTETIDLAEKQEKSG-PVKIFARSN-DKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTL 1022
YQTETIDL E+ +S ++F +SN +K+ SIDSDGLP++GQMI P EP S Y+ +
Sbjct: 789 YQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEV 848
Query: 1021 TSMTKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHG 842
TS KG +KK++ KVNIR R RNP+IGDKFSSRHG
Sbjct: 849 TSSIHTLKRKG------SEAVYVDYVAADVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHG 902
Query: 841 QKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDA 662
QKGVCSQLWPD+DMPFS TGMRPDLIINPHAFPSRMTI MLLES+AAK GSL G+F+DA
Sbjct: 903 QKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDA 962
Query: 661 TPFASSVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPV 482
TPF SSV+K+ G S+ SLVD+LG +L GFNYHG EVLYSG YGTE+TCEIFIGPV
Sbjct: 963 TPFRSSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPV 1022
Query: 481 YYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDR 302
YYQRLRHMVSDKFQVRSTGT+D +TRQP+ GEMERDS+LAHGAAYLLHDR
Sbjct: 1023 YYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDR 1082
Query: 301 LHSCSDYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKNFTCHACKSKKGMET 122
LH+CSDYHIA+VCS CGS+L T IQ QKR V EI G+P + PK TCHAC++ KGMET
Sbjct: 1083 LHTCSDYHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMET 1142
Query: 121 VAMPYVFRYLATELAAMNIRMELKLSNRAG 32
VAMPYVFRYLA ELAAMNI+M LKLS+ AG
Sbjct: 1143 VAMPYVFRYLAAELAAMNIKMTLKLSDGAG 1172
>tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
Length = 1162
Score = 1570 bits (4066), Expect = 0.0
Identities = 780/1168 (66%), Positives = 943/1168 (80%), Gaps = 10/1168 (0%)
Frame = -2
Query: 3505 DYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSPKDA 3326
DY+ALRELF+PH+ESFDYF+DKGL+ ++SIRP+ +LSP
Sbjct: 17 DYSALRELFRPHVESFDYFLDKGLDEMIESIRPMG-----------------HVLSPMRG 59
Query: 3325 T--STRKIYPQE-CREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCHLR 3155
IYPQE CR+A+ +Y G VEV FQYNEG IRH FG LPIMLMSK CHLR
Sbjct: 60 ARPGVLPIYPQEQCRQARISYHGEFKVEVCFQYNEGAQIRHTFNFGHLPIMLMSKLCHLR 119
Query: 3154 GAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSDKA 2975
GA+P KL++H EEATEMGGYFIC G+ERL R+L+L KRNYPM LVR S RG GY+DKA
Sbjct: 120 GADPHKLVFHGEEATEMGGYFICGGMERLVRILVLQKRNYPMGLVRNSFLKRGAGYTDKA 179
Query: 2974 VIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVSLT 2795
V++RCV+ DQSSV++KLYY+ NGSARLGFW+ GREFLLPVGIVLKALID +D EI+ SLT
Sbjct: 180 VVIRCVQRDQSSVTIKLYYILNGSARLGFWLGGREFLLPVGIVLKALIDASDREIFTSLT 239
Query: 2794 CCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEGES 2615
CCY++++ R KG V TQLIGERAQI+LDEVR LS+ TR++CL+HIG+YF+ M GFE +
Sbjct: 240 CCYSDKHGRGKGVVSTQLIGERAQIVLDEVRNLSILTRTQCLVHIGQYFRSVMEGFENDD 299
Query: 2614 YTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGH 2435
Y VAEAVL+D+I VHL +NHDKFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPGH
Sbjct: 300 YITVAEAVLKDYIFVHLENNHDKFNLLIFMLQKLYALVDQTASPDNPDALQYQEALLPGH 359
Query: 2434 LITLFLKEKVMEWLRKSRRQLVDEIAKGNNFNIKDVEQVKKVLQRGSSTIGKSVESMIKV 2255
L T+FLK+++ EWLRKS+R +++E AK F++ + +++K L + ++++G++VESMIKV
Sbjct: 360 LFTVFLKDRLQEWLRKSKRLILEEAAKNKGFDLGNALEIRKFLTKYTTSVGRAVESMIKV 419
Query: 2254 GRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPESWGF 2075
G +++ S +DLPQ+EGMT+ AERLNF R+ISHFR+VHRG+AFAKMRTT VRKL+PESWGF
Sbjct: 420 GNVNSRSGLDLPQREGMTIHAERLNFHRYISHFRSVHRGSAFAKMRTTSVRKLLPESWGF 479
Query: 2074 LCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPLLPKL 1895
LCPVHTPDGEPCGLLNHMTSTCRV+S+YNSEG IK+F +++K + LVR+GM+P+LPK+
Sbjct: 480 LCPVHTPDGEPCGLLNHMTSTCRVSSFYNSEGVIKNFGEMKKLLSAELVRVGMNPVLPKI 539
Query: 1894 EHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLSLGGA 1715
E GPPEVL V LDG ++G+IA + +E+ V ++R+LKL A SGIP DLEVGYVP S GA
Sbjct: 540 EQTGPPEVLHVHLDGCILGTIASAMIEKAVNYLRTLKLLAHSGIPEDLEVGYVPPSFNGA 599
Query: 1714 YPGLYLFTSPSRFLRPVRN--ISHTANCNIELIGPFEQAFMEIRCADGGDGGRRS-FPAT 1544
+PGLYLFT+P+RF+RPVRN I +IELIGPFEQAFMEIRC DGGDGGR+ FPAT
Sbjct: 600 FPGLYLFTNPARFVRPVRNLFILSDGKQSIELIGPFEQAFMEIRCPDGGDGGRQEPFPAT 659
Query: 1543 HEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYHLQAP 1364
HEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF QAL+FR+DVKA+HLQ P
Sbjct: 660 HEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTP 719
Query: 1363 QSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYQTE 1184
Q+PIVRT Y KYC+DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+V+RG+ RGHIYQTE
Sbjct: 720 QTPIVRTGTYTKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVERGMFRGHIYQTE 779
Query: 1183 TIDLAEKQEKSGPVKIFARS-NDKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTLTSMTK 1007
IDL+ K + P + FA+S + S+ IDSDGLP +GQ ++P E YS +++LT++ +
Sbjct: 780 CIDLSTKSRDNVP-ETFAKSILTRDTSNVIDSDGLPRLGQAVHPNEQYYSVHNSLTNVIR 838
Query: 1006 PTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHGQKGVC 827
P +KG SK + K NIR RRVRNPIIGDKFSSRHGQKGVC
Sbjct: 839 PVKLKG-----TEPAFIDYVAVNGTGSKCGLQKANIRLRRVRNPIIGDKFSSRHGQKGVC 893
Query: 826 SQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFAS 647
SQLWPDIDMPFS+ TGMRPDLIINPHAFPSRMTI MLLES+AAKAGSLHGKFIDATPFA+
Sbjct: 894 SQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESMAAKAGSLHGKFIDATPFAN 953
Query: 646 SVSKEDGNKHSER-SSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPVYYQR 470
S+ K+ K S++ +S+VDELGPMLAS+GFNYHG+EVLYSG +GTEM CEIFIGPVYYQR
Sbjct: 954 SLKKD---KDSDKPNSIVDELGPMLASYGFNYHGNEVLYSGVFGTEMDCEIFIGPVYYQR 1010
Query: 469 LRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSC 290
LRHMVSDKFQVR+TG +D ITRQP+ GEMERD++LAHG++YLLHDRLHSC
Sbjct: 1011 LRHMVSDKFQVRTTGRIDQITRQPIGGRKHGGGIRFGEMERDALLAHGSSYLLHDRLHSC 1070
Query: 289 SDYHIAEVCSFCGSILTATVIQQ--QKRVVPEIRGVPQTKTPKNFTCHACKSKKGMETVA 116
SDYHIA+VCSFCGS+LTAT+I+ QK+V E+ G+P + KNF C ACK+ KGMETVA
Sbjct: 1071 SDYHIADVCSFCGSLLTATMIKSDTQKKVKHEMLGLPTVRPAKNFACQACKTSKGMETVA 1130
Query: 115 MPYVFRYLATELAAMNIRMELKLSNRAG 32
MPYVFRYLA ELAAMNI++EL+LSN++G
Sbjct: 1131 MPYVFRYLAAELAAMNIKLELRLSNKSG 1158
>ref|XP_011087223.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Sesamum
indicum]
Length = 1196
Score = 1569 bits (4063), Expect = 0.0
Identities = 783/1172 (66%), Positives = 932/1172 (79%), Gaps = 14/1172 (1%)
Frame = -2
Query: 3505 DYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSPKDA 3326
DY ALRELFK HI+SFD+ ++ G+E L SI+P+++FD +N LRI+ P + P+
Sbjct: 30 DYEALRELFKHHIDSFDHMVEHGIERMLLSIKPVEVFDSFSNLKLRIWFENPEIYPPQKE 89
Query: 3325 TSTRK----IYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCHL 3158
+R +YP ECR+AK TY G ++V FQY++G ++R + FG P+ML SK CHL
Sbjct: 90 RFSRTMADALYPFECRQAKLTYAGRFMIDVKFQYDDGVSVREKINFGQFPVMLKSKLCHL 149
Query: 3157 RGA-EPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSD 2981
R A +P+KL+ HKEE +EMGGYFI NGLER+ RLLILPKRNYPMS+VR S R R +GYSD
Sbjct: 150 RAANDPKKLVRHKEEPSEMGGYFIMNGLERVIRLLILPKRNYPMSMVRNSFRERREGYSD 209
Query: 2980 KAVIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVS 2801
KAV++RCVREDQS+V+VKLYYL NGSARLGFWI+GRE+LLPVGI++KALIDT DHEIYVS
Sbjct: 210 KAVVIRCVREDQSAVTVKLYYLNNGSARLGFWIQGREYLLPVGIIMKALIDTTDHEIYVS 269
Query: 2800 LTCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEG 2621
LTCCYNE+Y R KG+VGTQL+GERA+IILDE++ +SL+TR++CL HIGE+FQP M G E
Sbjct: 270 LTCCYNEKYDRVKGSVGTQLVGERAKIILDELQNMSLYTRAQCLQHIGEHFQPLMAGLEK 329
Query: 2620 ESYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLP 2441
ESY+VVA+AVLRD+I VHL N DKFNLLIFMLQKL++LVDQT+ PDN D LQNQEVLLP
Sbjct: 330 ESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQEVLLP 389
Query: 2440 GHLITLFLKEKVMEWLRKSRRQLVDEI-AKGNNFNIKDVEQVKKVLQRGS-STIGKSVES 2267
GHLIT++LKEK+ +WL K++R L DE+ + F + + VKKV+++ + IG ++E+
Sbjct: 390 GHLITIYLKEKLQDWLLKAKRTLQDEVDNRTKKFELSSLADVKKVIEKNTPRQIGAAIEN 449
Query: 2266 MIKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPE 2087
++K GRL T S +DL Q+ GMTVQAERLNFLRF+SHFRAVHRGA+FA +RTT VRKL+PE
Sbjct: 450 LLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 509
Query: 2086 SWGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPL 1907
SWGFLCPVHTPDGEPCGLLN+MTS+CR+TSYY+S+GK+KDF +++KSI VLV +GM+P
Sbjct: 510 SWGFLCPVHTPDGEPCGLLNNMTSSCRITSYYDSKGKVKDFLEVRKSILKVLVSIGMTPS 569
Query: 1906 LPKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLS 1727
LPKL AGPPEVL VLLDGRVVGSIA +E+ V H+R LK++A+ IP DLEVGY+PLS
Sbjct: 570 LPKLVQAGPPEVLPVLLDGRVVGSIASDIIEKAVCHLRRLKVAATFAIPEDLEVGYIPLS 629
Query: 1726 LGGAYPGLYLFTSPSRFLRPVRN--ISHTANCNIELIGPFEQAFMEIRCADGGDGGRRS- 1556
+GGAYPGL+LFTS SRF+RPVRN I NIELIGPFEQ +MEI C DGGDGGR++
Sbjct: 630 MGGAYPGLHLFTSASRFVRPVRNILIPPEEGNNIELIGPFEQVYMEISCPDGGDGGRKNV 689
Query: 1555 FPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYH 1376
FPATHEEIHPTG+LSVV NLTPWSDHNQSPRNMYQCQM KQTMGFS QAL R+D K YH
Sbjct: 690 FPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQALVARADQKLYH 749
Query: 1375 LQAPQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHI 1196
LQ PQ+PIVRT Y KY ID++P GTNAIVAVLAYSGYDMEDAM+LNKSSVDRG+CRG+I
Sbjct: 750 LQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCRGYI 809
Query: 1195 YQTETIDLAEKQEKSG-PVKIFARSN-DKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTL 1022
YQTETIDL E+ +S + F RSN D++ IDSDGLPY+GQ I+P EP S Y+ +
Sbjct: 810 YQTETIDLTEQNLRSDRSQRSFGRSNLDRSTHHLIDSDGLPYVGQRISPNEPYCSIYNEI 869
Query: 1021 TSMTKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHG 842
TS +KG +KK+I K NIR R RNPIIGDKFSSRHG
Sbjct: 870 TSKVTTNKLKG------SEPVYVDYVAVDVKNKKHIQKANIRLRHPRNPIIGDKFSSRHG 923
Query: 841 QKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDA 662
QKGVCSQLWPD DMPFS VTGMRPDLIINPHAFPSRMTI MLLESIAAK G+LHG F+DA
Sbjct: 924 QKGVCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDA 983
Query: 661 TPFASSVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPV 482
TPF+SS+ K SE SSLVDELG ML + GFNYHG EVLYSG YGTE+TCEIFIGPV
Sbjct: 984 TPFSSSMKKNSVGSESESSSLVDELGSMLIARGFNYHGVEVLYSGVYGTELTCEIFIGPV 1043
Query: 481 YYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDR 302
YYQRLRHMVSDKFQVRSTGTVD +TRQP+ GEMERDS+LAHGAAYLLHDR
Sbjct: 1044 YYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGVRFGEMERDSLLAHGAAYLLHDR 1103
Query: 301 LHSCSDYHIAEVCSFCGSILTATVIQQQKRVVPEI--RGVPQTKTPKNFTCHACKSKKGM 128
LH+ SD+HIA+VCS CGSILT ++IQ QK+ V ++ R +P + PK TC AC++ GM
Sbjct: 1104 LHTSSDHHIADVCSLCGSILTTSLIQSQKKAVRDMIGRDLPPGRAPKKVTCVACQTSTGM 1163
Query: 127 ETVAMPYVFRYLATELAAMNIRMELKLSNRAG 32
ETVAMPYVFRYLA ELAAMNI+M L+LS+ G
Sbjct: 1164 ETVAMPYVFRYLAAELAAMNIKMALQLSSGPG 1195
>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Glycine max]
Length = 1175
Score = 1569 bits (4063), Expect = 0.0
Identities = 785/1170 (67%), Positives = 931/1170 (79%), Gaps = 11/1170 (0%)
Frame = -2
Query: 3508 PDYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSPK- 3332
PD+ ALRELFK HIESFDY D GLE L+ I+PI++FD T+T LRI+L P L P+
Sbjct: 9 PDFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQK 68
Query: 3331 ---DATSTRKIYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCH 3161
T + P ECR+AK +Y G ++++V FQYN+GP IR N+ FG PIML SK C+
Sbjct: 69 ERISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCN 128
Query: 3160 LRGAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSD 2981
LRGA+PQKL+ ++EEA+EMGGYFI NGLER+ RLLILPKRN+PMS+VR S R +GY+D
Sbjct: 129 LRGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTD 188
Query: 2980 KAVIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVS 2801
KA+++RCVR DQSS+SV+LYYL+NGSARLGFW++GRE+LLPVGI+LKALIDT D EIYV+
Sbjct: 189 KAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248
Query: 2800 LTCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEG 2621
LT CYNE+Y++ KG VGTQL+GERA+IILDE+R LSLFTR +CL +IGE+FQP + +
Sbjct: 249 LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKN 308
Query: 2620 ESYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLP 2441
+SY +VAEAVL+D ILVHL +N DKFNLLIFMLQKL++L+DQT+ PDN D LQN EVLLP
Sbjct: 309 DSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368
Query: 2440 GHLITLFLKEKVMEWLRKSRRQLVDEI-AKGNNFNIKDVEQVKKVLQRGS-STIGKSVES 2267
GHLITL+LKEK+ +WL+K +R L+DEI K F+ D+ QVKKV+ + S + +VE+
Sbjct: 369 GHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428
Query: 2266 MIKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPE 2087
M+K GRL T + +DL Q+ G TVQAERLNFLRF+SHFRAVHRGA+FA +RTT VRKL+PE
Sbjct: 429 MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPE 488
Query: 2086 SWGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPL 1907
SWGFLCPVHTPDGEPCGLLNHMT T R+TS+++S+G +KD+ I+ SI VL+ +GM+P
Sbjct: 489 SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPS 548
Query: 1906 LPKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLS 1727
LPK+ GPPE L VLLDG VVG IA SE E+VVAHIR LK+S+++ IP+D+EVGYVPLS
Sbjct: 549 LPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLS 608
Query: 1726 LGGAYPGLYLFTSPSRFLRPVRNISHTANC--NIELIGPFEQAFMEIRCADGGDGGRR-S 1556
+GGAYPGLYL TSPSRF+RPVRNIS +N NIE IGPFEQ FMEIRC DGGDGGR+ S
Sbjct: 609 MGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGGDGGRKSS 668
Query: 1555 FPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYH 1376
FPATHEEIHPT MLSVVANLTPWSDHNQSPRNMYQCQMAKQTM FSSQ +Q R+D K YH
Sbjct: 669 FPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728
Query: 1375 LQAPQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHI 1196
LQ PQ+PIVRT+ Y KY IDEFPTGTNAIVAVLAY+GYDMEDAMILNKSSV+RG+ G I
Sbjct: 729 LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 788
Query: 1195 YQTETIDLAEKQEK-SGPVKIFARSN-DKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTL 1022
YQTETIDL E+ + ++F +SN +K+ SIDSDGLP++GQMI P EP S Y+ +
Sbjct: 789 YQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEV 848
Query: 1021 TSMTKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHG 842
TS KG +KK++ KVNIR R RNP+IGDKFSSRHG
Sbjct: 849 TSSIHTLKRKG------SEAVYVDYVAVDVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHG 902
Query: 841 QKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDA 662
QKGVCSQLWPD+DMPFS TGMRPDLIINPHAFPSRMTI MLLES+AAK GSL G+F+DA
Sbjct: 903 QKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDA 962
Query: 661 TPFASSVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPV 482
TPF SSV K+ G S S+VD+LG +L GFNYHG EVLYSG YGTE+TCEIFIGPV
Sbjct: 963 TPFRSSVKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPV 1022
Query: 481 YYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDR 302
YYQRLRHMVSDKFQVRSTGT+D +TRQP+ GEMERDS+LAHGAAYLLHDR
Sbjct: 1023 YYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDR 1082
Query: 301 LHSCSDYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKNFTCHACKSKKGMET 122
LH+CSDYHIA+VCS CGS+LT T Q QKR V EI G+P + PK TCHAC++ KGMET
Sbjct: 1083 LHTCSDYHIADVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMET 1142
Query: 121 VAMPYVFRYLATELAAMNIRMELKLSNRAG 32
VAMPYVFRYLA ELAAMNI+M LKLS+ AG
Sbjct: 1143 VAMPYVFRYLAAELAAMNIKMTLKLSDGAG 1172
>ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Brachypodium
distachyon]
Length = 1181
Score = 1569 bits (4062), Expect = 0.0
Identities = 775/1163 (66%), Positives = 935/1163 (80%), Gaps = 7/1163 (0%)
Frame = -2
Query: 3505 DYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSP-KD 3329
+YA LREL++PHIESFDYF+D+GL+ L SIRP+ I PS++ LRI L + LL P +D
Sbjct: 19 EYATLRELYRPHIESFDYFLDEGLDKMLLSIRPMDISHPSSSDTLRISLEKGHLLPPLRD 78
Query: 3328 ATSTRKIYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCHLRGA 3149
+ +YPQECR+A+ +Y G V+ FQ+N G +R FG LPIMLMSK CHLRGA
Sbjct: 79 VRMAKPLYPQECRQARISYSGEFKVDTLFQFNNGAPMRQTFNFGHLPIMLMSKLCHLRGA 138
Query: 3148 EPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSDKAVI 2969
+ +KLIYH EEATEMGGYFI G+ERL R+L+L KRNYPM +VR + RG GY+DKAV+
Sbjct: 139 DSRKLIYHGEEATEMGGYFINGGMERLIRILVLQKRNYPMGMVRGAFEKRGPGYTDKAVV 198
Query: 2968 MRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVSLTCC 2789
+RCV++DQ+SV+VKLYYLQNGSARLGFW+ RE LLPVGIVLKALIDT+D EI+ SLTCC
Sbjct: 199 IRCVQQDQTSVTVKLYYLQNGSARLGFWLGAREVLLPVGIVLKALIDTSDREIFASLTCC 258
Query: 2788 YNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEGESYT 2609
Y+++Y+R KG V QLIGERAQIILDEVR LSL TR++CL HIG+YF+ AM GFE + Y
Sbjct: 259 YSDKYERGKGVVSNQLIGERAQIILDEVRALSLLTRTQCLEHIGQYFRSAMEGFEKDDYQ 318
Query: 2608 VVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLI 2429
VAEAVL+D++LVHL +NH KFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPG+LI
Sbjct: 319 TVAEAVLKDYVLVHLQNNHAKFNLLIFMLQKLYALVDQTASPDNPDALQYQEALLPGYLI 378
Query: 2428 TLFLKEKVMEWLRKSRRQLVDEIAKGNNFNIKDVEQVKKVLQRGSSTIGKSVESMIKVGR 2249
T+FLK+++ +WLRKS+R +++E K +F + ++++K L + S+++G+++ES+IK+GR
Sbjct: 379 TVFLKDRIQDWLRKSKRLIIEEATKNKSFEFDNSQEIRKFLCKHSTSVGRAIESLIKIGR 438
Query: 2248 LSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPESWGFLC 2069
++ S +DLPQ+EGM++QAERLNF R+ISHFR+VHRG+AFAKMRTT VRKL+PESWGFLC
Sbjct: 439 ANSQSMLDLPQREGMSIQAERLNFHRYISHFRSVHRGSAFAKMRTTTVRKLLPESWGFLC 498
Query: 2068 PVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPLLPKLEH 1889
PVHTPDGEPCGLLNHMTS CR++S+Y+SEG +KDF I+ + LVR GM PL PK+EH
Sbjct: 499 PVHTPDGEPCGLLNHMTSACRISSFYHSEGAMKDFEKIKDRLLAELVRGGMIPLSPKMEH 558
Query: 1888 AGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLSLGGAYP 1709
GPPEVL V LDG +VGSI +++EE+V +IR LKL A P DLEVGYVPLS+GGAYP
Sbjct: 559 TGPPEVLHVHLDGCIVGSIGSAKIEELVNYIRRLKLLAHPATPEDLEVGYVPLSIGGAYP 618
Query: 1708 GLYLFTSPSRFLRPVRNISH--TANCNIELIGPFEQAFMEIRCADGGDGGRR-SFPATHE 1538
GLY FTSP+RF+RPV+N+ +IELIG FEQAFMEIRC DGGDGGR+ SFPATHE
Sbjct: 619 GLYFFTSPARFVRPVKNLVSLPDGEPHIELIGAFEQAFMEIRCPDGGDGGRKESFPATHE 678
Query: 1537 EIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYHLQAPQS 1358
EIHPT MLSVVANLTPWS+HNQSPRNMYQCQMAKQTMGF QAL+FR+DVKA+HLQ PQS
Sbjct: 679 EIHPTAMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQS 738
Query: 1357 PIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYQTETI 1178
PIVRT Y KY +DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ RG IYQTE I
Sbjct: 739 PIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGDIYQTECI 798
Query: 1177 DLAEKQEKSGPVKIFARSN-DKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTLTSMTKPT 1001
DL+ + + +IFA+S+ + SS IDSDGLP +G+ I P E YSTY+TLT +PT
Sbjct: 799 DLSTTR-RGSVAEIFAKSSLSRDSSSVIDSDGLPRVGETIVPNEQYYSTYNTLTGAIRPT 857
Query: 1000 LVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHGQKGVCSQ 821
+KG SK + KVNIR RR RNPIIGDKFSSRHGQKGVCSQ
Sbjct: 858 RLKG-----TEPAAIDYVAVNGTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQKGVCSQ 912
Query: 820 LWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFASSV 641
LWPDIDMPFS+ TGMRPDLIINPHAFPSRMTI MLLESIAAKAGSLHG F+DATPFASSV
Sbjct: 913 LWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLHGNFVDATPFASSV 972
Query: 640 SKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPVYYQRLRH 461
+ DGN + S+VDE+GPMLAS+GFNYHG EVLYSG +GTE+TCEIFIGPVYYQRLRH
Sbjct: 973 KEGDGNPWKPK-SIVDEMGPMLASYGFNYHGVEVLYSGLFGTELTCEIFIGPVYYQRLRH 1031
Query: 460 MVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCSDY 281
MVSDKFQVR+TG +D +TRQP+ GEMERD++LAHGA+YLLHDRLHSCSDY
Sbjct: 1032 MVSDKFQVRTTGRIDQVTRQPIGGRKHGGGIRFGEMERDALLAHGASYLLHDRLHSCSDY 1091
Query: 280 HIAEVCSFCGSILTATVIQQQKRVVPE--IRGVPQTKTPKNFTCHACKSKKGMETVAMPY 107
HIA+VCS CGS+LTATVI+ + ++ + + GV K PKN C AC++ KGMETVAMPY
Sbjct: 1092 HIADVCSLCGSLLTATVIKSETQMKSKRNMLGVQTVKPPKNLACQACQTNKGMETVAMPY 1151
Query: 106 VFRYLATELAAMNIRMELKLSNR 38
VFRYLA ELAAMN++++L+LSNR
Sbjct: 1152 VFRYLAAELAAMNVKLDLRLSNR 1174
>gb|KHN35264.1| DNA-directed RNA polymerase I subunit RPA2 [Glycine soja]
Length = 1175
Score = 1566 bits (4055), Expect = 0.0
Identities = 784/1170 (67%), Positives = 930/1170 (79%), Gaps = 11/1170 (0%)
Frame = -2
Query: 3508 PDYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSPK- 3332
PD+ ALRELFK HIESFDY D GLE L+ I+PI++FD T+T LRI+L P L P+
Sbjct: 9 PDFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQK 68
Query: 3331 ---DATSTRKIYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCH 3161
T + P ECR+AK +Y G ++++V FQYN+GP IR N+ FG PIML SK C+
Sbjct: 69 ERISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCN 128
Query: 3160 LRGAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSD 2981
LRGA+PQKL+ ++EEA+EMGGYFI NGLER+ RLLILPKRN+PMS+VR S R +GY+D
Sbjct: 129 LRGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTD 188
Query: 2980 KAVIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVS 2801
KA+++RCVR DQSS+SV+LYYL+NGSARLGFW++GRE+LLPVGI+LKALIDT D EIYV+
Sbjct: 189 KAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248
Query: 2800 LTCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEG 2621
LT CYNE+Y++ KG VGTQL+GERA+IILDE+R LSLFTR +CL +IGE+FQP + +
Sbjct: 249 LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKN 308
Query: 2620 ESYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLP 2441
+SY +VAEAVL+D ILVHL +N DKFNLLIFMLQKL++L+DQT+ PDN D LQN EVLLP
Sbjct: 309 DSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368
Query: 2440 GHLITLFLKEKVMEWLRKSRRQLVDEI-AKGNNFNIKDVEQVKKVLQRGS-STIGKSVES 2267
GHLITL+LKEK+ +WL+K +R L+DEI K F+ D+ QVKKV+ + S + +VE+
Sbjct: 369 GHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428
Query: 2266 MIKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPE 2087
M+K GRL T + +DL Q+ G TVQAERLNFLRF+SHFRAVHRGA+FA +RTT VRKL+PE
Sbjct: 429 MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPE 488
Query: 2086 SWGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPL 1907
SWGFLCPVHTPDGEPCGLLNHMT T R+TS+++S+G +KD+ I+ SI VL+ +GM+P
Sbjct: 489 SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPS 548
Query: 1906 LPKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLS 1727
LPK+ GPPE L VLLDG VVG IA SE E+VVAHIR LK+S+++ IP+D+EVGYVPLS
Sbjct: 549 LPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLS 608
Query: 1726 LGGAYPGLYLFTSPSRFLRPVRNISHTANC--NIELIGPFEQAFMEIRCADGGDGGRR-S 1556
+GGAYPGLYL TSPSRF+RPVRNIS +N NIE IGPFEQ FMEIRC DGGDGGR+ S
Sbjct: 609 MGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGGDGGRKSS 668
Query: 1555 FPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYH 1376
FPATHEEIHPT MLSVVANLTPWSD NQSPRNMYQCQMAKQTM FSSQ +Q R+D K YH
Sbjct: 669 FPATHEEIHPTVMLSVVANLTPWSDQNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728
Query: 1375 LQAPQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHI 1196
LQ PQ+PIVRT+ Y KY IDEFPTGTNAIVAVLAY+GYDMEDAMILNKSSV+RG+ G I
Sbjct: 729 LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 788
Query: 1195 YQTETIDLAEKQEK-SGPVKIFARSN-DKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTL 1022
YQTETIDL E+ + ++F +SN +K+ SIDSDGLP++GQMI P EP S Y+ +
Sbjct: 789 YQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEV 848
Query: 1021 TSMTKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHG 842
TS KG +KK++ KVNIR R RNP+IGDKFSSRHG
Sbjct: 849 TSSIHTLKRKG------SEAVYVDYVAVDVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHG 902
Query: 841 QKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDA 662
QKGVCSQLWPD+DMPFS TGMRPDLIINPHAFPSRMTI MLLES+AAK GSL G+F+DA
Sbjct: 903 QKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDA 962
Query: 661 TPFASSVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPV 482
TPF SSV K+ G S S+VD+LG +L GFNYHG EVLYSG YGTE+TCEIFIGPV
Sbjct: 963 TPFRSSVKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPV 1022
Query: 481 YYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDR 302
YYQRLRHMVSDKFQVRSTGT+D +TRQP+ GEMERDS+LAHGAAYLLHDR
Sbjct: 1023 YYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDR 1082
Query: 301 LHSCSDYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKNFTCHACKSKKGMET 122
LH+CSDYHIA+VCS CGS+LT T Q QKR V EI G+P + PK TCHAC++ KGMET
Sbjct: 1083 LHTCSDYHIADVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMET 1142
Query: 121 VAMPYVFRYLATELAAMNIRMELKLSNRAG 32
VAMPYVFRYLA ELAAMNI+M LKLS+ AG
Sbjct: 1143 VAMPYVFRYLAAELAAMNIKMTLKLSDGAG 1172
>ref|XP_004486057.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cicer
arietinum] gi|502078798|ref|XP_004486058.1| PREDICTED:
DNA-directed RNA polymerase I subunit RPA2-like [Cicer
arietinum]
Length = 1177
Score = 1559 bits (4036), Expect = 0.0
Identities = 779/1164 (66%), Positives = 924/1164 (79%), Gaps = 9/1164 (0%)
Frame = -2
Query: 3505 DYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSPKDA 3326
++ ALR+L KPHIESFD+ ID GL+ I+P+++ P+ T L+I + P++ P+
Sbjct: 16 NFDALRDLLKPHIESFDHMIDAGLKTMFIGIKPLEVPHPTQPTTLKISMDNPKIFEPQKE 75
Query: 3325 TSTRK----IYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCHL 3158
K +YP ECR+AK +Y G + E+ FQY+ GP +R FG PIML SK C+L
Sbjct: 76 RGFSKSRNILYPFECRQAKISYTGTFTAELCFQYDNGPIVREKFNFGQFPIMLQSKLCNL 135
Query: 3157 RGAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSDK 2978
RGA P+KL+ +KEEA+E+GGYFI NGLER+ RLLI+PKRNYPMS VR S R +GY+DK
Sbjct: 136 RGASPKKLVSYKEEASEVGGYFILNGLERVMRLLIMPKRNYPMSTVRSSFSERREGYTDK 195
Query: 2977 AVIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVSL 2798
AV++RCVR DQ+SVS+KLYYL+NGSARLGFWI GRE++LPVGIVLKALIDT D EIYV+L
Sbjct: 196 AVVIRCVRADQTSVSIKLYYLRNGSARLGFWILGREYMLPVGIVLKALIDTTDREIYVNL 255
Query: 2797 TCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEGE 2618
T CYNE+Y++ KG VGTQL+GERA+IILDEVR LSLFTR +CL +IGE+FQP + G + E
Sbjct: 256 TSCYNEKYEKGKGAVGTQLVGERAKIILDEVRDLSLFTRLQCLQYIGEHFQPILQGLKNE 315
Query: 2617 SYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPG 2438
S+ +VA+AVLRD+ILVHL +N DKFNLLIFMLQKL++L+DQT+ PDN D LQNQEVLLPG
Sbjct: 316 SHHIVADAVLRDYILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNQEVLLPG 375
Query: 2437 HLITLFLKEKVMEWLRKSRRQLVDEI-AKGNNFNIKDVEQVKKVLQRG-SSTIGKSVESM 2264
HLITL+LKEK+ EWL+K +R L+DEI KG F + VKKVL++ + I ++E+M
Sbjct: 376 HLITLYLKEKLEEWLQKGKRLLLDEIEKKGATFEFGRIADVKKVLEKNHTKGISTAIENM 435
Query: 2263 IKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPES 2084
+K GRL T + +DL Q+ G TVQAER+NFLRFISHFRAVHRG++FA +RTT VRKL+PES
Sbjct: 436 LKTGRLVTTTGLDLHQRAGYTVQAERINFLRFISHFRAVHRGSSFAGLRTTTVRKLLPES 495
Query: 2083 WGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPLL 1904
WGFLCPVHTPDGEPCGLLNHMT TCRVTS+Y+SEG IKD+ I+ SI +LV +GM+ L
Sbjct: 496 WGFLCPVHTPDGEPCGLLNHMTRTCRVTSFYDSEGNIKDYFKIKLSILNILVEIGMTQSL 555
Query: 1903 PKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLSL 1724
PK+ GPPEVL VLLDG +VG I +EVE+VVAHIR LK+S+++ IPND+EVGYVPLS+
Sbjct: 556 PKIFLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHIRELKVSSAAVIPNDMEVGYVPLSM 615
Query: 1723 GGAYPGLYLFTSPSRFLRPVRNIS-HTANCNIELIGPFEQAFMEIRCADGGDGGRRS-FP 1550
GGAYPGLYLFTSPSRF+RPVRN+S + N N+ELIGPFEQ FMEIRC DGGDGGR+S FP
Sbjct: 616 GGAYPGLYLFTSPSRFVRPVRNLSIPSTNENVELIGPFEQVFMEIRCPDGGDGGRKSPFP 675
Query: 1549 ATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYHLQ 1370
ATHEEIHPTGMLSVV NLTPWSDHNQSPRNMYQCQMAKQTMGFSSQ +Q R+D K YHLQ
Sbjct: 676 ATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQTIQHRADQKLYHLQ 735
Query: 1369 APQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYQ 1190
PQ+PIVRT Y++Y IDE+P+GTNAIVAVLAY+GYDMEDAMILNKSSV+RG+ G IYQ
Sbjct: 736 TPQTPIVRTRAYSEYSIDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQ 795
Query: 1189 TETIDLAEKQEKSG-PVKIFARSNDKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTLTSM 1013
TETIDL EK KS ++F +S SIDSDGLP++GQMI P EP STY+ +T+
Sbjct: 796 TETIDLTEKGGKSDQSARVFRKSKLDKPCPSIDSDGLPHVGQMIWPDEPYCSTYNEVTNK 855
Query: 1012 TKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHGQKG 833
T KG +KK +NKVNIR R RNP+IGDKFSSRHGQKG
Sbjct: 856 TYLFKKKG------SEPVYVDYVAVDTKTKKNLNKVNIRFRHPRNPVIGDKFSSRHGQKG 909
Query: 832 VCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPF 653
VCSQLWPDIDMPFS TGMRPDLIINPHAFPSRMTI MLLES+AAK GSLHGKF DATPF
Sbjct: 910 VCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFKDATPF 969
Query: 652 ASSVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPVYYQ 473
SSV K+D S+ +SLVDELG ML GFNYHG EVLYSG YGTE+TCEIFIGPVYYQ
Sbjct: 970 RSSVKKDDEESGSKSASLVDELGVMLKEKGFNYHGCEVLYSGVYGTELTCEIFIGPVYYQ 1029
Query: 472 RLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHS 293
RLRHMVSDK+QVRSTGT+D +TRQP+ GEMERDS+LAHGAAYLLHDRLH+
Sbjct: 1030 RLRHMVSDKYQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHT 1089
Query: 292 CSDYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKNFTCHACKSKKGMETVAM 113
CSDYHIA+VCS CGS+LT T Q +KR V EI G+P + P+ TCHAC+S KGME VAM
Sbjct: 1090 CSDYHIADVCSICGSMLTTTFQQPRKRPVREIGGLPPARAPRKVTCHACQSSKGMEKVAM 1149
Query: 112 PYVFRYLATELAAMNIRMELKLSN 41
PY+FRYLA ELAAMNI+M LKL++
Sbjct: 1150 PYIFRYLAAELAAMNIKMTLKLTD 1173
>ref|XP_012068704.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa2 isoform X1
[Jatropha curcas]
Length = 1179
Score = 1558 bits (4035), Expect = 0.0
Identities = 785/1170 (67%), Positives = 934/1170 (79%), Gaps = 16/1170 (1%)
Frame = -2
Query: 3505 DYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSP-KD 3329
D+ L+EL K HI+SFDY +++GLE+ L +I+P++I D TNT+L++YL P++ P ++
Sbjct: 14 DFRELQELAKHHIDSFDYMVERGLEVMLDNIKPVEIHDSFTNTSLKLYLSNPKVYEPVRE 73
Query: 3328 A--TSTRKIYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCHLR 3155
A T +++ P ECR+AK +Y G +V F+Y P IR FG LPIML S+ CHL
Sbjct: 74 ALRTKIKRLLPFECRQAKVSYCGKFEADVCFEYRGRPVIREKYNFGQLPIMLKSRLCHLY 133
Query: 3154 GAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSDKA 2975
GA+ QKL+ KEE++EMGGYFI NGLER+ R LI+PKRNYPMS+VR S R R +GY+DKA
Sbjct: 134 GADSQKLVSMKEESSEMGGYFILNGLERVVRCLIMPKRNYPMSMVRGSFRDRREGYTDKA 193
Query: 2974 VIMRCVRE------DQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHE 2813
V++RCVRE DQSSV+VKLYYL++GSARLGFWI+GRE+LLPVGIVLKAL +T D E
Sbjct: 194 VVIRCVREYQSSLTDQSSVTVKLYYLRSGSARLGFWIQGREYLLPVGIVLKALAETTDWE 253
Query: 2812 IYVSLTCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMW 2633
IY LTCC++E+Y + KG VG+Q +GERA+IILDEVR LSLFT++ECL HIGE+FQP M
Sbjct: 254 IYEKLTCCFDEKYDKTKGAVGSQFVGERAKIILDEVRGLSLFTQTECLRHIGEHFQPVMD 313
Query: 2632 GFEGESYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQE 2453
G E ES++ VA AVL+D++ VHLT+ DKFNLLIFMLQKL++LVD+T+ DN D LQNQE
Sbjct: 314 GLEKESFSNVAHAVLKDYVFVHLTNYDDKFNLLIFMLQKLFSLVDKTSVEDNPDSLQNQE 373
Query: 2452 VLLPGHLITLFLKEKVMEWLRKSRRQLVDEIAKGNNFNIKDVEQVKKVLQRG-SSTIGKS 2276
+LLPGHLIT++LKEK+ EWLRK+++ + +EI K N V VKKV+ + SS++ +
Sbjct: 374 ILLPGHLITIYLKEKLEEWLRKAKKVIQEEIEKNKKLNFLSVSDVKKVMDKNHSSSVSLA 433
Query: 2275 VESMIKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKL 2096
VE+++K GRL T + +DL Q+ G TVQAERLNFLRF+S FRAVHRGA+FA +RTT VRKL
Sbjct: 434 VENLLKTGRLITQTGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTSVRKL 493
Query: 2095 MPESWGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGM 1916
+PESWGFLCPVHTPDGEPCGLLNHMT +CRVTSY++S G +KDF D++KSI VL LGM
Sbjct: 494 LPESWGFLCPVHTPDGEPCGLLNHMTRSCRVTSYFDSHGAVKDFFDMRKSILGVLTGLGM 553
Query: 1915 SPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYV 1736
LPKL AGPP+VL VLLDGRVVGSI SEVE+VVAH+R LK+SA+S IP+DLEVGY+
Sbjct: 554 ISSLPKLVQAGPPQVLSVLLDGRVVGSIPSSEVEKVVAHLRRLKVSAASMIPDDLEVGYI 613
Query: 1735 PLSLGGAYPGLYLFTSPSRFLRPVRNISHTA--NCNIELIGPFEQAFMEIRCADGGDGGR 1562
PLS+GGAYPGLYLFTSPSRF+RPVRNIS A + NIELIGPFEQ +MEIRC DGG+GGR
Sbjct: 614 PLSMGGAYPGLYLFTSPSRFIRPVRNISIPADDSRNIELIGPFEQVYMEIRCPDGGNGGR 673
Query: 1561 R-SFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVK 1385
+FPATHEEIHPT MLSVVANLTPWSDHNQSPRNMYQCQMAKQTM FS Q+L+FR+D K
Sbjct: 674 SDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQSLRFRADQK 733
Query: 1384 AYHLQAPQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCR 1205
YHLQ PQ+PIVRT+ Y KYCIDE+PTGTNAIVAVLAY+GYDMEDAMILNKSSV+RG+
Sbjct: 734 LYHLQTPQTPIVRTSAYTKYCIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFH 793
Query: 1204 GHIYQTETIDLAEKQEKSGPV-KIFARSN-DKTMSSSIDSDGLPYIGQMINPKEPLYSTY 1031
G IYQTETIDL+E+ KS K+F RSN D++ S IDSDGLPYIGQMI+P EP S Y
Sbjct: 794 GQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSVIDSDGLPYIGQMIHPNEPYCSIY 853
Query: 1030 DTLTSMTKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSS 851
D +T+ TK KG +K I KVNIR R RNPIIGDKFSS
Sbjct: 854 DEVTNTTKTNNRKG------SDPVFVDYVAVDTKNKNNIQKVNIRFRHPRNPIIGDKFSS 907
Query: 850 RHGQKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKF 671
RHGQKGVCSQLWPDIDMPFS TGMRPDLIINPHAFPSRMTI MLLES+AAK GSL+GKF
Sbjct: 908 RHGQKGVCSQLWPDIDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESLAAKGGSLNGKF 967
Query: 670 IDATPFASSVSK-EDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIF 494
+DATPFA+SV K E G+ S+ SLVD+LG ML SHGFNYHG EVLYSG YGTE+ CEIF
Sbjct: 968 VDATPFANSVKKAEGGDNKSDSESLVDDLGEMLRSHGFNYHGVEVLYSGVYGTELACEIF 1027
Query: 493 IGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYL 314
IGPVYYQRLRHMVSDKFQVRSTG VD +TRQP+ GEMERD++LAHGAAYL
Sbjct: 1028 IGPVYYQRLRHMVSDKFQVRSTGVVDQVTRQPIKGRKRGGGIRFGEMERDAMLAHGAAYL 1087
Query: 313 LHDRLHSCSDYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKNFTCHACKSKK 134
LHDRLH+CSDYHIA+VCS CGSILT++ +Q QKRVV +I G+P + PK CHAC++ K
Sbjct: 1088 LHDRLHTCSDYHIADVCSICGSILTSSFVQTQKRVVRDIGGLPPVRAPKKVACHACQTSK 1147
Query: 133 GMETVAMPYVFRYLATELAAMNIRMELKLS 44
GMETVAMPYVFRYLA ELAAMNI+M ++LS
Sbjct: 1148 GMETVAMPYVFRYLAAELAAMNIKMTVQLS 1177
>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
gi|561006696|gb|ESW05690.1| hypothetical protein
PHAVU_011G201300g [Phaseolus vulgaris]
Length = 1180
Score = 1554 bits (4023), Expect = 0.0
Identities = 783/1174 (66%), Positives = 933/1174 (79%), Gaps = 16/1174 (1%)
Frame = -2
Query: 3508 PDYAALRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSPK- 3332
PD+ ALRELFK HIESFD+ + GLE L I+PI++ D T T LRI+L P + P+
Sbjct: 9 PDFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPPQK 68
Query: 3331 ---DATSTRKIYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCH 3161
T + P ECR+AK +Y G ++++V FQYN+GP IR NV FG PIML SK C+
Sbjct: 69 ERISKTMREALLPFECRQAKISYAGKITIDVCFQYNDGPVIRENVNFGQFPIMLQSKLCN 128
Query: 3160 LRGAEPQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSD 2981
LRGA+P+KL+ KEEA+EMGGYFI NGLER+ RLLILPKRNYPMS+VR S R +GY+D
Sbjct: 129 LRGADPKKLVSCKEEASEMGGYFILNGLERVIRLLILPKRNYPMSMVRSSFCDRREGYTD 188
Query: 2980 KAVIMRCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVS 2801
KAV++RCVR DQSS+S++LYYL+NGSARLGFW++GRE+LLPVGIVLKALIDT D EIYV+
Sbjct: 189 KAVVIRCVRADQSSLSIRLYYLRNGSARLGFWLRGREYLLPVGIVLKALIDTTDREIYVN 248
Query: 2800 LTCCYNERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEG 2621
LT CYNE+Y + KG VGTQL+GERA+IILDE+R LSLFTR +CL +IGE+FQP M
Sbjct: 249 LTSCYNEKYAKGKGAVGTQLVGERAKIILDELRDLSLFTRRQCLEYIGEHFQPIMPELMK 308
Query: 2620 ESYTVVAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLP 2441
+SY +VA+AVL+D ILVHL ++ DKFNLLIFMLQKL++L+DQT+ PDN D LQN EVLLP
Sbjct: 309 DSYAIVADAVLKDCILVHLDNDFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368
Query: 2440 GHLITLFLKEKVMEWLRKSRRQLVDEI-AKGNNFNIKDVEQVKKVLQRGSS-TIGKSVES 2267
GHLI+L++KEK+ +WL+K ++ L+DEI K N F+ D+ QVKK++ + S+ + SVE+
Sbjct: 369 GHLISLYIKEKLEDWLQKGKKLLMDEIQKKSNKFDFSDIAQVKKIMDKNSAKLVSASVEN 428
Query: 2266 MIKVGRLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPE 2087
++K GRL T + +DL Q+ G TVQAERLNFLRF+SHFRAVHRGA+FA +RTT VRKL+PE
Sbjct: 429 LLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFMSHFRAVHRGASFAGLRTTTVRKLLPE 488
Query: 2086 SWGFLCPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPL 1907
SWGFLCPVHTPDGEPCGLLNHMT TCR+TS+++S+G IKD+ IQKSI+ +L+ +GM+
Sbjct: 489 SWGFLCPVHTPDGEPCGLLNHMTRTCRITSFFDSQGNIKDYFKIQKSIRDILMEVGMTSS 548
Query: 1906 LPKLEHAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLS 1727
LPK+ GPPE L VLLDG VVG IA SEVE+VVA+IR LK+S++S IP D+EVGYVPLS
Sbjct: 549 LPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAYIRELKVSSASVIPGDMEVGYVPLS 608
Query: 1726 LGGAYPGLYLFTSPSRFLRPVRNISHTANC--NIELIGPFEQAFMEIRCADGGDGGRR-S 1556
+GGAYPGLYLFTSPSRF+RPV+NIS +N +IELIGPFEQ FMEIRC DGGDGGR+ S
Sbjct: 609 MGGAYPGLYLFTSPSRFVRPVKNISIPSNGSESIELIGPFEQVFMEIRCLDGGDGGRKSS 668
Query: 1555 FPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYH 1376
FPATHEEIHPT MLSVVANLTPWSDHNQSPRNMYQCQMAKQTM FSSQ +Q R+D K YH
Sbjct: 669 FPATHEEIHPTEMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728
Query: 1375 LQAPQSPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHI 1196
LQ PQ+PIVRT+ Y KY IDEFPTGTNAIVAVLAY+GYDMEDAMILNKSSV+RG+ G I
Sbjct: 729 LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 788
Query: 1195 YQTETIDLAEKQEKSG-PVKIFARSN-DKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTL 1022
YQTETIDL E++ KS +IF +SN +K SIDSDGLP++GQMI P EP S Y+ +
Sbjct: 789 YQTETIDLTEQRGKSDRSSRIFRKSNVEKLGCPSIDSDGLPHVGQMIRPDEPYCSIYNEV 848
Query: 1021 TSMTKPTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHG 842
TS T+ KG +KK+I KVNIR R RNP+IGDKFSSRHG
Sbjct: 849 TSSTQTYKRKG------SEAVYVDYVAVDVKNKKHIQKVNIRFRHPRNPVIGDKFSSRHG 902
Query: 841 QKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDA 662
QKGVCSQLWPD+DMPFS TGMRPDLIINPHAFPSRMTI MLLES+AAK GSL G+F+DA
Sbjct: 903 QKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDA 962
Query: 661 TPFASSVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPV 482
TPF SS K+ S+ SLVD+LG +L GFNYHG EVLYSG YGTE+TCEIFIGPV
Sbjct: 963 TPFRSSTKKDGEGSDSKSGSLVDDLGVLLKEKGFNYHGLEVLYSGVYGTELTCEIFIGPV 1022
Query: 481 YYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDR 302
YYQRLRHMVSDKFQVRSTGT+D +TRQP+ GEMERDS+LAHGAAYLLHDR
Sbjct: 1023 YYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDR 1082
Query: 301 LHSCSDYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTP-----KNFTCHACKSK 137
LH+CSDYHIA+VCS CGS+L+ T IQ QKR V +I G+P + P K +CHAC++
Sbjct: 1083 LHTCSDYHIADVCSLCGSMLSTTFIQPQKRPVRQIGGLPPGRLPPGRAAKKVSCHACQTS 1142
Query: 136 KGMETVAMPYVFRYLATELAAMNIRMELKLSNRA 35
KGMETVAMPYVFRYLA ELAAMNI+M LKL++ A
Sbjct: 1143 KGMETVAMPYVFRYLAAELAAMNIKMTLKLNDGA 1176
>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
isoform 2 [Theobroma cacao]
Length = 1180
Score = 1554 bits (4023), Expect = 0.0
Identities = 772/1165 (66%), Positives = 923/1165 (79%), Gaps = 11/1165 (0%)
Frame = -2
Query: 3493 LRELFKPHIESFDYFIDKGLELALKSIRPIQIFDPSTNTNLRIYLGEPRLLSPK----DA 3326
L+ELFK HIESFDY ID+GL+L LK ++P+QIFD S+N LRI+L P + P+
Sbjct: 21 LKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYPPQKDRSSK 80
Query: 3325 TSTRKIYPQECREAKTTYRGHLSVEVFFQYNEGPAIRHNVGFGGLPIMLMSKRCHLRGAE 3146
TS +YP ECR+AK +Y G ++V FQ++ G +R + FG PIML SKRC+LR A+
Sbjct: 81 TSAGALYPFECRQAKISYTGSFHIDVCFQWDGGVVVREKLNFGEFPIMLKSKRCYLREAD 140
Query: 3145 PQKLIYHKEEATEMGGYFICNGLERLCRLLILPKRNYPMSLVRKSLRARGDGYSDKAVIM 2966
P+KL+ KEE+ EMGGYFI NGLER+ RLLILPKRNYPMSLVR S R R +GY+DKAV++
Sbjct: 141 PRKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMSLVRNSFRDRREGYTDKAVVI 200
Query: 2965 RCVREDQSSVSVKLYYLQNGSARLGFWIKGREFLLPVGIVLKALIDTNDHEIYVSLTCCY 2786
RCVR D SSV+VKLYYL NGSARLGFW++GRE++LPVGI+LKALIDTND EIY LTCCY
Sbjct: 201 RCVRGDLSSVTVKLYYLHNGSARLGFWVQGREYMLPVGIILKALIDTNDREIYTKLTCCY 260
Query: 2785 NERYQRDKGTVGTQLIGERAQIILDEVRMLSLFTRSECLMHIGEYFQPAMWGFEGESYTV 2606
NE+ KG VGTQL+GERA+IILDEV+ L+LFT+ +CL HIGE+FQP M G E ESY+
Sbjct: 261 NEKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQEQCLQHIGEHFQPIMEGMESESYST 320
Query: 2605 VAEAVLRDFILVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLIT 2426
VA+ VLR++I VHL N+DKFNLLIFM+QKL++L+DQT+APDN D LQNQEVLLPGHLIT
Sbjct: 321 VADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLIDQTSAPDNSDSLQNQEVLLPGHLIT 380
Query: 2425 LFLKEKVMEWLRKSRRQLVDEIA-KGNNFNIKDVEQVKKVLQRGSST-IGKSVESMIKVG 2252
++LKEK+ +WLRK ++ + D I K NF+ ++ VKKV+++ T + ++E+++K G
Sbjct: 381 IYLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMKDVKKVMEKNRPTQVSAAIENLLKTG 440
Query: 2251 RLSTLSSVDLPQKEGMTVQAERLNFLRFISHFRAVHRGAAFAKMRTTVVRKLMPESWGFL 2072
RL T + +DL Q+ G TVQAERLN+ RF+S FR VHRGA+FA +RTT VRKL+PESWGFL
Sbjct: 441 RLITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCVHRGASFAGLRTTSVRKLLPESWGFL 500
Query: 2071 CPVHTPDGEPCGLLNHMTSTCRVTSYYNSEGKIKDFRDIQKSIQYVLVRLGMSPLLPKLE 1892
CPVHTPDGEPCGLLNHMT TCR+TSYYNS G I+DF I+ SI VLV +GM+ PK++
Sbjct: 501 CPVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRDFFKIRMSILDVLVGVGMTTSWPKVD 560
Query: 1891 HAGPPEVLQVLLDGRVVGSIACSEVEEVVAHIRSLKLSASSGIPNDLEVGYVPLSLGGAY 1712
HAGPP+VL VLLDGRVVGS+ E E+VVAH+R LKL+A+S IP+DLEVGYVPLSLGG Y
Sbjct: 561 HAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVIPDDLEVGYVPLSLGGTY 620
Query: 1711 PGLYLFTSPSRFLRPVRNISHTA--NCNIELIGPFEQAFMEIRCADGGDGGRRS-FPATH 1541
PGLYLFTSPSRF+RPVRNIS + +IELIGPFEQ FMEIRC DGG+GGR + FPATH
Sbjct: 621 PGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFMEIRCPDGGNGGRSNIFPATH 680
Query: 1540 EEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRSDVKAYHLQAPQ 1361
EEI PT MLSVVANLTPWSDHNQSPRNMYQCQMAKQTM FS QA+ R+D K YHLQ PQ
Sbjct: 681 EEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAINARADQKLYHLQTPQ 740
Query: 1360 SPIVRTTLYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYQTET 1181
+PIVRT Y KYC+DE+P+GTNAIVAVLAY+GYDMEDAMILNKSSV+RG+C G IYQTET
Sbjct: 741 TPIVRTKTYTKYCMDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGQIYQTET 800
Query: 1180 IDLAEKQEKSGP-VKIFARSN-DKTMSSSIDSDGLPYIGQMINPKEPLYSTYDTLTSMTK 1007
IDL + + KS +IF R + D+++SS +DSDGLP++GQ+I P EP ST + +T+ +
Sbjct: 801 IDLGDDKSKSDRGQRIFKREHSDRSISSCLDSDGLPHVGQVIRPNEPYCSTINQVTNSKR 860
Query: 1006 PTLVKGXXXXXXXXXXXXXXXXXXXXSKKYINKVNIRTRRVRNPIIGDKFSSRHGQKGVC 827
KG KK++ K NIR R RNP+IGDKFSSRHGQKGVC
Sbjct: 861 LYNHKGSETVIVDYVAVDTKS------KKHLQKANIRFRHPRNPVIGDKFSSRHGQKGVC 914
Query: 826 SQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFAS 647
SQLWPDIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAK GSLHGKF+DATPF+
Sbjct: 915 SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSD 974
Query: 646 SVSKEDGNKHSERSSLVDELGPMLASHGFNYHGSEVLYSGYYGTEMTCEIFIGPVYYQRL 467
SV + G +E SLVDELG ML + GFNYHG EVLYSG YGTE+TCEIFIGPVYYQRL
Sbjct: 975 SVKEAKGKTEAESESLVDELGSMLRARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRL 1034
Query: 466 RHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCS 287
RHMVSDK+QVR+TG VD ITRQP+ GEMERD++LAHGAAYLLHDRLH+CS
Sbjct: 1035 RHMVSDKYQVRATGQVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCS 1094
Query: 286 DYHIAEVCSFCGSILTATVIQQQKRVVPEIRGVPQTKTPKNFTCHACKSKKGMETVAMPY 107
DYHIA+VCS CGSILT +++Q KRVV EI G+P + PK TCHAC++ KGMETVAMPY
Sbjct: 1095 DYHIADVCSLCGSILTTSIVQPPKRVVREIGGLPPARAPKKVTCHACQTSKGMETVAMPY 1154
Query: 106 VFRYLATELAAMNIRMELKLSNRAG 32
VFRYLA ELAAMNI M ++L++ AG
Sbjct: 1155 VFRYLAAELAAMNITMTIQLNSGAG 1179