BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00007732
         (1024 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]        302   2e-99
emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group] gi...   306   9e-98
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   296   2e-96
gb|ABI34306.1| Polyprotein, putative [Solanum demissum]               292   3e-96
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   291   7e-95
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               288   1e-94
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   296   1e-93
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   296   7e-90
gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subc...   265   5e-88
emb|CAN62884.1| hypothetical protein VITISV_039744 [Vitis vinifera]   261   2e-86
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]   318   3e-84
ref|XP_002489303.1| hypothetical protein SORBIDRAFT_0010s005460 ...   310   1e-81
gb|AAT85203.1| putative polyprotein [Oryza sativa Japonica Group]     263   2e-81
gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subc...   309   2e-81
gb|AAM94928.1| putative polyprotein [Oryza sativa Japonica Group]     309   2e-81
gb|ABB47865.2| retrotransposon protein, putative, Ty1-copia subc...   309   2e-81
gb|AAM95676.1| putative polyprotein [Oryza sativa Japonica Group]     309   2e-81
gb|AAK13130.1|AC083945_5 Putative gag-pol polyprotein [Oryza sat...   309   2e-81
emb|CAI44606.1| P0650D04.10 [Oryza sativa Japonica Group]             253   2e-81
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...   308   3e-81

>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score =  302 bits (773), Expect(2) = 2e-99
 Identities = 149/256 (58%), Positives = 184/256 (71%), Gaps = 20/256 (7%)
 Frame = -3

Query: 716  RIRKQKDFGDDFITFNVE------------------DPQTFQEAMQSKDVHLWKEAIDDE 591
            R+RK+K +GDDF ++ VE                  DP+TF EAM S+D  LWKEA++DE
Sbjct: 811  RVRKEKSYGDDFFSYLVEGTQKKVMREVIFAVNLDDDPKTFNEAMSSRDAPLWKEAVNDE 870

Query: 590  MDSLIQNHTWELVDVPEGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFD 411
            MDS++ N TWEL D+P+G +PI  KWIFKRK  PDG+I  YKARLVAKG+ Q+EG+D+FD
Sbjct: 871  MDSIMGNGTWELADLPKGKKPIGSKWIFKRKYHPDGSISAYKARLVAKGYRQREGVDYFD 930

Query: 410  IYAPVCRITTIRVLIAWAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEGLDAPA--GKV 237
             YAPV RI +IR LIA +A+K   IHQMDVKTAFLNG L EEIY+E+PEG   P    KV
Sbjct: 931  TYAPVARIGSIRTLIAVSALKGLYIHQMDVKTAFLNGYLNEEIYLEQPEGFVMPGQENKV 990

Query: 236  CKLIKSLYGLKQAPKLWHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLI 57
            C+LIKSLYGLKQAPK WHE+FD  V   G+R + +D+C+Y K   G  VVICLYVDDMLI
Sbjct: 991  CRLIKSLYGLKQAPKQWHERFDTTVTAFGFRHNSADRCIYTKCEPGYTVVICLYVDDMLI 1050

Query: 56   IGTDLEIVTSAKEFLS 9
            I T LE ++  K++LS
Sbjct: 1051 ISTHLEGISETKKYLS 1066



 Score = 89.7 bits (221), Expect(2) = 2e-99
 Identities = 39/81 (48%), Positives = 59/81 (72%)
 Frame = -1

Query: 1009 STPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRFLDL 830
            ++P++LWKG    L++L+VWGCLAY R+PD +  KLG +A + VF+G+A  S + R LD 
Sbjct: 700  TSPYELWKGRKPNLEHLRVWGCLAYYRVPDPKTLKLGERAFKSVFIGYASHSKSYRLLDD 759

Query: 829  GTNSIIEARDAEFFEDKFIKD 767
             +  ++E+RD EFFE+KF +D
Sbjct: 760  ESGIVVESRDVEFFENKFSRD 780


>emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group]
            gi|38345937|emb|CAD41412.2| OSJNBb0078D11.12 [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  306 bits (785), Expect(2) = 9e-98
 Identities = 146/254 (57%), Positives = 188/254 (74%), Gaps = 3/254 (1%)
 Frame = -3

Query: 761  LIAQXXXXXXXXXXKRIRKQKDFGDDFITFNVED-PQTFQEAMQSKDVHLWKEAIDDEMD 585
            LI++          KR R  K FGDDF  + V+D P+   EA  S D   WKEA+  EMD
Sbjct: 756  LISEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKLISEAYASPDADYWKEAVRSEMD 815

Query: 584  SLIQNHTWELVDVPEGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIY 405
            S+I N TWE+ + P G +P+ CKW+FK+KLRPDGTIEKYKARLVAKG++QKEG DFFD Y
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 875

Query: 404  APVCRITTIRVLIAWAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEG--LDAPAGKVCK 231
            +PV R+TTIRVL++ AA    ++HQMDVKTAFLNG+L EEIYM++P+G  ++   GKVCK
Sbjct: 876  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCK 935

Query: 230  LIKSLYGLKQAPKLWHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIG 51
            L+KSLYGLKQAPK WHEKFD+ +   G+ V+E+DKC+Y +   G+ V++CLYVDD+LI G
Sbjct: 936  LLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFG 995

Query: 50   TDLEIVTSAKEFLS 9
            T+LE++   K FLS
Sbjct: 996  TNLEVINEVKSFLS 1009



 Score = 79.3 bits (194), Expect(2) = 9e-98
 Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
 Frame = -1

Query: 1012 DSTPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRFL- 836
            D TP+++W G    L  L+ WGCLA V +P  ++ KLGPK   CVFLG+A  S A RFL 
Sbjct: 639  DKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLI 698

Query: 835  ------DLGTNSIIEARDAEFFEDKF 776
                  D+   +I+E+RDA FFE  F
Sbjct: 699  VKSEVPDMHVGTIMESRDATFFESFF 724


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  296 bits (759), Expect(2) = 2e-96
 Identities = 134/222 (60%), Positives = 181/222 (81%), Gaps = 2/222 (0%)
 Frame = -3

Query: 662  DPQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVPEGARPISCKWIFKRKLRPDG 483
            +PQTF+EA+ S +  +WKEAI  E+DS++QNHTWELV++P G +P+S KWIFKRK++ DG
Sbjct: 764  EPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVBLPLGCKPLSSKWIFKRKMKVDG 823

Query: 482  TIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIAWAAIKKFVIHQMDVKTAFLN 303
            +I+KYKARLV KG+ Q EG+D+FD Y+PV RI +IR+++A AA++   IHQMDVKTAFLN
Sbjct: 824  SIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTAFLN 883

Query: 302  GDLTEEIYMEKPEGLDAPA--GKVCKLIKSLYGLKQAPKLWHEKFDRIVRGNGYRVSESD 129
            GDL EEIYME+PEG  AP    KVCKL+KSLYGLKQAPK WHEKFD ++  +G++++E D
Sbjct: 884  GDLDEEIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECD 943

Query: 128  KCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLSAQ 3
            KC+Y+K  E   V++CLYVDDMLI+G+D +++TS K  L+++
Sbjct: 944  KCVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLNSR 985



 Score = 84.7 bits (208), Expect(2) = 2e-96
 Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 7/88 (7%)
 Frame = -1

Query: 1018 KTDSTPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRF 839
            K + TP++LWKG       L++WGCLA V +P  ++ K+GPK   C+F+G+A +S+A RF
Sbjct: 674  KAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPKTIDCIFIGYAHNSNAYRF 733

Query: 838  L-------DLGTNSIIEARDAEFFEDKF 776
            L       D+  N+I+E+R+A FFED F
Sbjct: 734  LVYESNIPDIHKNTIMESRNASFFEDVF 761


>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score =  292 bits (747), Expect(2) = 3e-96
 Identities = 141/239 (58%), Positives = 177/239 (74%), Gaps = 3/239 (1%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVEDPQ-TFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
            KR R +KDFG DF  FNV D + T +EA+ S D   WKEA++DEM+SLI N TW+LVD+P
Sbjct: 763  KRARVEKDFGPDFYVFNVGDDRLTLKEALSSHDSIFWKEAVNDEMESLISNKTWKLVDLP 822

Query: 542  EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
             G + I CKW+ ++KL+PDG+I+KYKARLVAKGF Q EG++FFD ++PV RIT+IR+LIA
Sbjct: 823  PGCKTIGCKWVLRKKLKPDGSIDKYKARLVAKGFKQLEGLEFFDTFSPVTRITSIRLLIA 882

Query: 362  WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEGL--DAPAGKVCKLIKSLYGLKQAPKL 189
             AAI    IHQMDVKTAFLNGDL EEIYM++PE         KVCKL KSLYGLKQAPK 
Sbjct: 883  MAAIFDLQIHQMDVKTAFLNGDLNEEIYMDQPESFVEAGQESKVCKLTKSLYGLKQAPKQ 942

Query: 188  WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFL 12
            WHEKFD  +  NG++ +E DKC+Y K      V+ICLYVDD+LI G+++ ++   K  L
Sbjct: 943  WHEKFDSCMIENGFKTNECDKCIYHKSWNNSHVIICLYVDDLLIFGSNINVIDETKNIL 1001



 Score = 89.0 bits (219), Expect(2) = 3e-96
 Identities = 42/83 (50%), Positives = 55/83 (66%)
 Frame = -1

Query: 1024 YSKTDSTPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDAC 845
            + K+  TP +LWKGY   L  L+VWGCLA+VR+ D +  KLG K   C FLG+A +S A 
Sbjct: 640  HKKSKLTPFELWKGYKPSLGYLRVWGCLAFVRLMDPKITKLGKKVTTCAFLGYASNSTAY 699

Query: 844  RFLDLGTNSIIEARDAEFFEDKF 776
            RF +L  N +IE+ DA F E+KF
Sbjct: 700  RFFNLEDNIVIESGDAIFHENKF 722


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  291 bits (746), Expect(2) = 7e-95
 Identities = 136/242 (56%), Positives = 187/242 (77%), Gaps = 3/242 (1%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVE-DPQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
            KR+R +K FG DF+TF +E +PQTF+EA+ S +  +WKEAI  E+DS++QNHTWELVD+P
Sbjct: 793  KRVRTEKSFGPDFLTFMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLP 852

Query: 542  EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
             G +P+S KWIFKRK++ DG+I+KYKARLV KG+ Q EG+D+FD Y+PV RI +IR+++A
Sbjct: 853  PGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLA 912

Query: 362  WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEGLDAPA--GKVCKLIKSLYGLKQAPKL 189
             AA++   IHQMD+K          EIYME+PEG  AP    KVCKL+KSLYGLKQAPK 
Sbjct: 913  IAALRNLEIHQMDMK----------EIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAPKQ 962

Query: 188  WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
            WHEKFD ++  +G++++E DKC+Y+K  E   V++CLYVDDMLI+G+D +++TS K  L+
Sbjct: 963  WHEKFDNVMLSHGFKINECDKCVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLN 1022

Query: 8    AQ 3
            ++
Sbjct: 1023 SR 1024



 Score = 84.7 bits (208), Expect(2) = 7e-95
 Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 7/88 (7%)
 Frame = -1

Query: 1018 KTDSTPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRF 839
            K + TP++LWKG       L++WGCLA V +P  ++ K+GPK   C+F+G+A +S+A RF
Sbjct: 674  KAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPKTIDCIFIGYAHNSNAYRF 733

Query: 838  L-------DLGTNSIIEARDAEFFEDKF 776
            L       D+  N+I+E+R+A FFED F
Sbjct: 734  LVYESNIPDIHKNTIMESRNASFFEDVF 761


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  288 bits (738), Expect(2) = 1e-94
 Identities = 142/242 (58%), Positives = 182/242 (75%), Gaps = 3/242 (1%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVE-DPQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
            KR RK+  FG+DF T+ VE DP +F EA  + D   W +AI  E++S+ +N+TW LVD+P
Sbjct: 748  KRQRKETSFGNDFYTYLVENDPISFVEATSAPDAKHWDKAIKTELESIKKNNTWTLVDLP 807

Query: 542  EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
            +GA+PI CKWIFK+K  PDG+IEKYKARLVAKGF+QK  ID+FD +APV RI++IRVL+A
Sbjct: 808  KGAKPIGCKWIFKKKYHPDGSIEKYKARLVAKGFTQKHNIDYFDTFAPVTRISSIRVLLA 867

Query: 362  WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEG--LDAPAGKVCKLIKSLYGLKQAPKL 189
             A+I K VIHQMDVKT FLNG+L EEIYM +PEG  +     KVCKL+KSLYGLKQAPK 
Sbjct: 868  LASIHKLVIHQMDVKTTFLNGELEEEIYMTQPEGCVVLGQKEKVCKLLKSLYGLKQAPKQ 927

Query: 188  WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
            WHEK D ++   G+  +++DKC+Y +   G+ V+ICLYVDDMLI GT  +IV   K FL 
Sbjct: 928  WHEKLDNVLLCEGFSTNDADKCVYSRSENGEYVIICLYVDDMLIFGTCNDIVFKTKLFLG 987

Query: 8    AQ 3
            ++
Sbjct: 988  SK 989



 Score = 87.0 bits (214), Expect(2) = 1e-94
 Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 6/94 (6%)
 Frame = -1

Query: 1024 YSKTDSTPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDAC 845
            + KT  TP++LWKGY   L  L+VWG LA V +PD ++ K+G K + C+FLG+AE S A 
Sbjct: 634  HRKTGKTPYELWKGYQPNLKYLRVWGSLAKVMLPDPKKRKIGSKTSDCMFLGYAEHSAAY 693

Query: 844  RFLDLGT-----NSIIEARDAEFFEDKF-IKDKG 761
            RFL L +     N+I+E ++AEFFE  F +K  G
Sbjct: 694  RFLVLNSDIIERNTIVETKNAEFFEHIFPLKSSG 727


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  296 bits (758), Expect(2) = 1e-93
 Identities = 142/240 (59%), Positives = 182/240 (75%), Gaps = 3/240 (1%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNV-EDPQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
            KR R +K  GDD+I + V E+P++  EA  S D   W+EA+  EMDS+I N TWE+ D+P
Sbjct: 777  KRQRTEKSLGDDYIIYLVDEEPRSLTEAYTSPDAEYWREAVLSEMDSIISNGTWEITDLP 836

Query: 542  EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
             G +P+ CKWIF+RK RPDGTIEKYKARLVAKGF+QK+  D+FD Y+PV R+ TIRVL+A
Sbjct: 837  AGCKPVGCKWIFRRKRRPDGTIEKYKARLVAKGFTQKKEEDYFDTYSPVARLPTIRVLLA 896

Query: 362  WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEG--LDAPAGKVCKLIKSLYGLKQAPKL 189
             AA  K ++HQMDVKTAFLNG+L EEIYM++PEG  +     KVC+LIKSLYGLKQAP+ 
Sbjct: 897  LAAAYKLLVHQMDVKTAFLNGELEEEIYMQQPEGFVVKGQESKVCRLIKSLYGLKQAPRQ 956

Query: 188  WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
            WHEKF+  +   G+ V+E+DKC+Y + + GK V++CLYVDD+LI GTDLE +   K FLS
Sbjct: 957  WHEKFNNTLTTAGFCVNEADKCVYYRFSGGKGVIMCLYVDDILIFGTDLEAIMETKLFLS 1016



 Score = 75.9 bits (185), Expect(2) = 1e-93
 Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 8/91 (8%)
 Frame = -1

Query: 1012 DSTPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRFL- 836
            ++TP++ +KG    L +L+ WGCLA V +P  ++ KLGPK   CVFLG+A +S A RFL 
Sbjct: 656  EATPYEGFKGRKPDLSHLRTWGCLAKVNVPLPKKRKLGPKTVDCVFLGYAHNSAAYRFLV 715

Query: 835  ------DLGTNSIIEARDAEFFEDKF-IKDK 764
                  ++  N I+E+RD  FFE  F ++DK
Sbjct: 716  VHSETSEIAVNVIMESRDVTFFESIFPMRDK 746


>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  296 bits (759), Expect(2) = 7e-90
 Identities = 149/259 (57%), Positives = 187/259 (72%), Gaps = 21/259 (8%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVE------------------DPQTFQEAMQSKDVHLWKEAIDD 594
            KR R +K FG DF  + VE                  +P+TF EAM S DV  WKEA++D
Sbjct: 720  KRGRIEKSFGPDFQLYLVEGTRDETGFQYSYCYHIDDEPRTFSEAMMSNDVIFWKEAVND 779

Query: 593  EMDSLIQNHTWELVDVPEGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFF 414
            EMDS++ N+TW L D+P G +P++CKWIFK+K++ DGTI+K+KARLV +GF QKEGID+F
Sbjct: 780  EMDSIMGNNTWFLTDLPPGCKPLACKWIFKKKIKVDGTIDKFKARLVVQGFRQKEGIDYF 839

Query: 413  DIYAPVCRITTIRVLIAWAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEGLDAPAG--K 240
            D YAPV RI++IR+LI  A+I   VIHQMDVKTAFLNG L EE+YM++PEG   P    K
Sbjct: 840  DTYAPVVRISSIRLLIGLASIHNLVIHQMDVKTAFLNGVLEEEVYMKQPEGFVMPGNEHK 899

Query: 239  VCKLIKSLYGLKQAPKLWHEKFDRIVRGNGYRVSESDKCLYIKVAE-GKVVVICLYVDDM 63
            VCKL+KSLYGLKQAPK WH++FD  V  NG+ +++SDKCLY K  + G  V+ICLYVDDM
Sbjct: 900  VCKLVKSLYGLKQAPKQWHQRFDEAVLSNGFELNQSDKCLYSKFDDSGNGVIICLYVDDM 959

Query: 62   LIIGTDLEIVTSAKEFLSA 6
            LI GT+L  V   KEFLS+
Sbjct: 960  LIFGTNLRQVELTKEFLSS 978



 Score = 63.2 bits (152), Expect(2) = 7e-90
 Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
 Frame = -1

Query: 1006 TPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRFL--- 836
            TP++LW      L+ L+VWGC A VR+P  +   LG +   C+F+G+A  S A RF    
Sbjct: 602  TPYELWYKKKPNLNYLRVWGCRAIVRLPQPKIKTLGERGIDCIFIGYALHSKAYRFYVIE 661

Query: 835  ---DLGTNSIIEARDAEFFEDKF 776
                +  +++IE+RDA F E++F
Sbjct: 662  PNDSIAVHTVIESRDAIFDENRF 684


>gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1075

 Score =  265 bits (677), Expect(2) = 5e-88
 Identities = 129/240 (53%), Positives = 174/240 (72%), Gaps = 3/240 (1%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVED-PQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
            KR R +K FGDDFI + V+D P T  EA  S +   WKEA+  EMDS++ N TWE+  +P
Sbjct: 659  KRSRTEKTFGDDFIIYLVDDVPSTLSEAFASAEAAYWKEAVQSEMDSILSNGTWEITHLP 718

Query: 542  EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
            +G R I  + I  +KL+PDGTI+K+KARLVAKG++Q++G D+FD ++PV  + TIR L+A
Sbjct: 719  QGYRAIGYRAIGCKKLKPDGTIDKFKARLVAKGYTQRQGEDYFDTFSPVAHMPTIRALVA 778

Query: 362  WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEGLDAPA--GKVCKLIKSLYGLKQAPKL 189
             AA   + IHQMDVKTAFLNG+L EEIYM++P+G   P    KVCKL KSLYGLKQAP  
Sbjct: 779  LAAAYGYKIHQMDVKTAFLNGELEEEIYMQQPDGFVIPGQEDKVCKLEKSLYGLKQAPMQ 838

Query: 188  WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
            WHEKFD+ +   G+ V+++DKC+Y +      V++CLYVDD+LI+GT+L I++  K +LS
Sbjct: 839  WHEKFDKTLISAGFTVNDADKCVYSRFDGDIGVILCLYVDDILILGTNLNIISEIKSYLS 898



 Score = 88.6 bits (218), Expect(2) = 5e-88
 Identities = 43/87 (49%), Positives = 60/87 (68%), Gaps = 7/87 (8%)
 Frame = -1

Query: 1015 TDSTPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRFL 836
            T+ TP++LWKG    L+ LKVWGCLA V IP +++ KLGPK   CVF+G+A++S A RFL
Sbjct: 541  TEVTPYELWKGRKPNLNFLKVWGCLAKVNIPVVKKRKLGPKTVDCVFIGYAQNSLAYRFL 600

Query: 835  -------DLGTNSIIEARDAEFFEDKF 776
                   ++  N+++E+RD  FFED F
Sbjct: 601  VVKSETTEVRENTVMESRDTTFFEDTF 627


>emb|CAN62884.1| hypothetical protein VITISV_039744 [Vitis vinifera]
          Length = 1136

 Score =  261 bits (666), Expect(2) = 2e-86
 Identities = 133/248 (53%), Positives = 168/248 (67%), Gaps = 10/248 (4%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVEDPQTFQ----EAMQSKDVHLWKEAIDDEMDSLIQNHTWELV 552
            +R RK+K  G D I     D Q       E  +   +     AI+DEMDS++ N TWELV
Sbjct: 602  QRARKEKVLGSDEI-----DSQRISFYLVEGNREDIIRKIPIAINDEMDSIMSNQTWELV 656

Query: 551  DVPEGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRV 372
            D+P G++PI CKW+F+RK   DG I+ +KARLVAKGF Q+EGID+FD YAPV R T+IR+
Sbjct: 657  DLPPGSKPIGCKWVFRRKYHTDGMIQTFKARLVAKGFKQREGIDYFDTYAPVARTTSIRI 716

Query: 371  LIAWAAIKKFVIHQMDVKTAFLNG----DLTEEIYMEKPEG--LDAPAGKVCKLIKSLYG 210
            L A A+I    +HQMDVKTAFLNG    DL EE+YME+PEG  L     KVCKL+KSLYG
Sbjct: 717  LFALASIHNLFVHQMDVKTAFLNGDLNEDLNEEVYMEQPEGFVLLGNENKVCKLVKSLYG 776

Query: 209  LKQAPKLWHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVT 30
            LKQAPK WHEKFD  +  +G+R +  DKCLY K  +  +V++CLYVDDMLI+  D+  + 
Sbjct: 777  LKQAPKQWHEKFDHAILSDGFRHNNVDKCLYSKTCDDYMVIVCLYVDDMLILSDDMRGII 836

Query: 29   SAKEFLSA 6
              K FLS+
Sbjct: 837  ETKRFLSS 844



 Score = 87.4 bits (215), Expect(2) = 2e-86
 Identities = 39/79 (49%), Positives = 55/79 (69%)
 Frame = -1

Query: 1018 KTDSTPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRF 839
            K + +P++LWKG    +   KVWGCLAY +  D  + KLGP+A +C F+G+A +S A R 
Sbjct: 489  KNEISPYELWKGRKPNIGYFKVWGCLAYCKKTDPNKTKLGPRAIKCAFVGYASNSKAYRL 548

Query: 838  LDLGTNSIIEARDAEFFED 782
            LDL +N IIE+R+ EFFE+
Sbjct: 549  LDLESNVIIESREVEFFEN 567


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score =  318 bits (816), Expect = 3e-84
 Identities = 147/242 (60%), Positives = 194/242 (80%), Gaps = 3/242 (1%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVE-DPQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
            KR+R +K FG DF+TF +E +PQTF+EA+ S +  +WKEAI  E+DS++QNHTWELVD+P
Sbjct: 576  KRVRTEKSFGPDFLTFMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLP 635

Query: 542  EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
             G +P+S KWIFKRK++ DG+I+KYKARLV KG+ Q EG+D+FD Y+PV RI +IR+++A
Sbjct: 636  PGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLA 695

Query: 362  WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEGLDAPA--GKVCKLIKSLYGLKQAPKL 189
             AA++   IHQMDVKTAFLNGDL EEIYME+PEG  AP    KVCKL+KSLYGLKQAPK 
Sbjct: 696  IAALRNLEIHQMDVKTAFLNGDLDEEIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAPKQ 755

Query: 188  WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
            WHEKFD ++  +G++++E DKC+Y+K  E   V++CLYVDDMLI+G+D +++TS K  L 
Sbjct: 756  WHEKFDNVMLSHGFKINECDKCVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLQ 815

Query: 8    AQ 3
             Q
Sbjct: 816  IQ 817


>ref|XP_002489303.1| hypothetical protein SORBIDRAFT_0010s005460 [Sorghum bicolor]
           gi|241946951|gb|EES20096.1| hypothetical protein
           SORBIDRAFT_0010s005460 [Sorghum bicolor]
          Length = 699

 Score =  310 bits (794), Expect = 1e-81
 Identities = 146/240 (60%), Positives = 186/240 (77%), Gaps = 3/240 (1%)
 Frame = -3

Query: 719 KRIRKQKDFGDDFITFNVED-PQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
           KR R  K FG+DFI + V+D P T  EA  S D  +WKEA+  EMDS++ N TWE+VD P
Sbjct: 165 KRQRVAKSFGEDFIIYLVDDTPTTISEAYSSSDSDMWKEAVQSEMDSIMSNGTWEVVDRP 224

Query: 542 EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
            G +P+ CKW+FK+KLRPDGTIEKYKARLVAKG++QKEG D+FD Y+PV R+TTIRVL++
Sbjct: 225 FGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDYFDTYSPVARLTTIRVLLS 284

Query: 362 WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEGL--DAPAGKVCKLIKSLYGLKQAPKL 189
            AA   F+IHQMDVKTAFLNG+L EEIYM++P+G   +   GKVCKL+KSLYGLKQAPK 
Sbjct: 285 LAASHGFLIHQMDVKTAFLNGELEEEIYMDQPDGFIANGQEGKVCKLLKSLYGLKQAPKQ 344

Query: 188 WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
           WHEKFD+ +   G+ V+E+DKC+Y +   G  V++CLYVDD+LI G +L+++   KEFLS
Sbjct: 345 WHEKFDKTLTSAGFAVNEADKCVYYRFGGGDGVILCLYVDDILIFGNNLKVIKEVKEFLS 404



 Score = 65.5 bits (158), Expect = 6e-08
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
 Frame = -1

Query: 1006 TPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRFL--- 836
            TP + W+     +  L VWGCLA V +P  ++ K+GPK   CVFL +A  S   RFL   
Sbjct: 34   TPFEEWEKKRLNISYLHVWGCLAKVNVPINKKRKIGPKTVDCVFLDYAIHSVGYRFLIIN 93

Query: 835  ----DLGTNSIIEARDAEFFEDKF 776
                D+   +++E+RDA FFE++F
Sbjct: 94   SNAPDMAVGTVMESRDATFFENEF 117


>gb|AAT85203.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 2772

 Score =  263 bits (671), Expect(2) = 2e-81
 Identities = 131/240 (54%), Positives = 170/240 (70%), Gaps = 3/240 (1%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVED-PQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
            KR R  K FGDDF  + V+D P++  EA  S D   WKEA+  EMDS+I N TWE     
Sbjct: 576  KRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWE----- 630

Query: 542  EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
                     W+FK+KL PDGTIEKYKARLVAKG++QKEG D FD Y+PV R+TTI VL++
Sbjct: 631  ---------WVFKKKLWPDGTIEKYKARLVAKGYTQKEGEDLFDTYSPVARLTTIHVLLS 681

Query: 362  WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEG--LDAPAGKVCKLIKSLYGLKQAPKL 189
             AA    +++QMDVK AFLNG+L EEIYM++P+   ++   GKVCKL+KSLYGLKQAPK 
Sbjct: 682  LAASHGLLVYQMDVKIAFLNGELDEEIYMDQPDWFVVEGQEGKVCKLLKSLYGLKQAPKQ 741

Query: 188  WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
            WHEKFD+ +   G+ V+E++KC+Y +   G+ V++CLYVDD+LI GT+LE++   K  LS
Sbjct: 742  WHEKFDKTLTFAGFAVNETNKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSLLS 801



 Score = 68.9 bits (167), Expect(2) = 2e-81
 Identities = 33/73 (45%), Positives = 43/73 (58%)
 Frame = -1

Query: 1012 DSTPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRFLD 833
            D TP+++W G    L  L+ WGCLA V +P  ++ KLGPK   CVFLG+A  S A RFL 
Sbjct: 485  DKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKCKLGPKTVDCVFLGYAHHSIAYRFLI 544

Query: 832  LGTNSIIEARDAE 794
            +  +SI      E
Sbjct: 545  VNLSSITPPEQTE 557


>gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1022

 Score =  309 bits (792), Expect = 2e-81
 Identities = 146/240 (60%), Positives = 186/240 (77%), Gaps = 3/240 (1%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVED-PQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
            KR R  K FGDD+I + V+D P+T +EA  S D   WKEA+  EMDS++ N TWE+V+ P
Sbjct: 684  KRQRTAKSFGDDYIVYLVDDTPRTIEEAYSSPDTDYWKEAVRSEMDSIMSNGTWEVVERP 743

Query: 542  EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
             G +P+ CKW+FK+KLRPDGTIEKYKARLVAKG++QKEG DFFD Y+PV R+TTIRVL+A
Sbjct: 744  YGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLA 803

Query: 362  WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEG--LDAPAGKVCKLIKSLYGLKQAPKL 189
             AA    +IHQMDVKTAFLNG+L EEIYM++P+G  L++  G VCKL+KSLYGLKQAPK 
Sbjct: 804  LAASHGLLIHQMDVKTAFLNGELEEEIYMDQPDGYVLESQEGMVCKLLKSLYGLKQAPKQ 863

Query: 188  WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
            WHEKFD  +   G+ V+E+DKC+Y +   G+ V++CLYVDD+LI GT L ++   K+FLS
Sbjct: 864  WHEKFDNTLTSAGFVVNEADKCVYYRCGGGEGVILCLYVDDILIFGTSLNVIEEVKDFLS 923


>gb|AAM94928.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 619

 Score =  309 bits (792), Expect = 2e-81
 Identities = 145/240 (60%), Positives = 186/240 (77%), Gaps = 3/240 (1%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVED-PQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
            KR R  K FGDD+I + V+D P+T +EA  S D   WKEA+  EMDS++ N TWE+V+ P
Sbjct: 303  KRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERP 362

Query: 542  EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
             G +P+ CKW+FK+KLRPDGTIEKYKARLVAKG++QKEG DFFD Y+PV R+TTIRVL+A
Sbjct: 363  YGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLA 422

Query: 362  WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEG--LDAPAGKVCKLIKSLYGLKQAPKL 189
             AA    ++HQMDVKTAFLNG+L EEIYM++P+G  L+   G VCKL+KSLYGLKQAPK 
Sbjct: 423  LAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQEGMVCKLLKSLYGLKQAPKQ 482

Query: 188  WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
            WHEKFD  +   G+ V+E+DKC+Y +   G+VV++CLYVDD+LI GT L ++   K++LS
Sbjct: 483  WHEKFDTTLTSAGFVVNEADKCVYYRYGGGEVVILCLYVDDILIFGTSLNVIEEVKDYLS 542


>gb|ABB47865.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1126

 Score =  309 bits (792), Expect = 2e-81
 Identities = 145/240 (60%), Positives = 186/240 (77%), Gaps = 3/240 (1%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVED-PQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
            KR R  K FGDD+I + V+D P+T +EA  S D   WKEA+  EMDS++ N TWE+V+ P
Sbjct: 624  KRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERP 683

Query: 542  EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
             G +P+ CKW+FK+KLRPDGTIEKYKARLVAKG++QKEG DFFD Y+PV R+TTIRVL+A
Sbjct: 684  YGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLA 743

Query: 362  WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEG--LDAPAGKVCKLIKSLYGLKQAPKL 189
             AA    ++HQMDVKTAFLNG+L EEIYM++P+G  L+   G VCKL+KSLYGLKQAPK 
Sbjct: 744  LAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQEGMVCKLLKSLYGLKQAPKQ 803

Query: 188  WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
            WHEKFD  +   G+ V+E+DKC+Y +   G+VV++CLYVDD+LI GT L ++   K++LS
Sbjct: 804  WHEKFDTTLTSAGFVVNEADKCVYYRYGGGEVVILCLYVDDILIFGTSLNVIEEVKDYLS 863



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
 Frame = -1

Query: 1006 TPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRFL--- 836
            TP + W+     L  L+ WGCLA V +P  ++ KLGPK   CVFLG+A  S   RFL   
Sbjct: 495  TPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAIHSVGYRFLIVN 554

Query: 835  ----DLGTNSIIEARDAEFFEDKF 776
                D+   +I+E+RDA FFE++F
Sbjct: 555  SGVPDMHVGTILESRDATFFENEF 578


>gb|AAM95676.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1138

 Score =  309 bits (792), Expect = 2e-81
 Identities = 145/240 (60%), Positives = 186/240 (77%), Gaps = 3/240 (1%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVED-PQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
            KR R  K FGDD+I + V+D P+T +EA  S D   WKEA+  EMDS++ N TWE+V+ P
Sbjct: 636  KRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERP 695

Query: 542  EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
             G +P+ CKW+FK+KLRPDGTIEKYKARLVAKG++QKEG DFFD Y+PV R+TTIRVL+A
Sbjct: 696  YGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLA 755

Query: 362  WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEG--LDAPAGKVCKLIKSLYGLKQAPKL 189
             AA    ++HQMDVKTAFLNG+L EEIYM++P+G  L+   G VCKL+KSLYGLKQAPK 
Sbjct: 756  LAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQEGMVCKLLKSLYGLKQAPKQ 815

Query: 188  WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
            WHEKFD  +   G+ V+E+DKC+Y +   G+VV++CLYVDD+LI GT L ++   K++LS
Sbjct: 816  WHEKFDTTLTSAGFVVNEADKCVYYRYGGGEVVILCLYVDDILIFGTSLNVIEEVKDYLS 875



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
 Frame = -1

Query: 1006 TPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRFL--- 836
            TP + W+     L  L+ WGCLA V +P  ++ KLGPK   CVFLG+A  S   RFL   
Sbjct: 507  TPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAIHSVGYRFLIVN 566

Query: 835  ----DLGTNSIIEARDAEFFEDKF 776
                D+   +I+E+RDA FFE++F
Sbjct: 567  SGVPDMHVGTILESRDATFFENEF 590


>gb|AAK13130.1|AC083945_5 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1363

 Score =  309 bits (792), Expect = 2e-81
 Identities = 146/240 (60%), Positives = 186/240 (77%), Gaps = 3/240 (1%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVED-PQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
            KR R  K FGDD+I + V+D P+T +EA  S D   WKEA+  EMDS++ N TWE+V+ P
Sbjct: 776  KRQRTAKSFGDDYIVYLVDDTPRTIEEAYSSPDTDYWKEAVRSEMDSIMSNGTWEVVERP 835

Query: 542  EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
             G +P+ CKW+FK+KLRPDGTIEKYKARLVAKG++QKEG DFFD Y+PV R+TTIRVL+A
Sbjct: 836  YGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLA 895

Query: 362  WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEG--LDAPAGKVCKLIKSLYGLKQAPKL 189
             AA    +IHQMDVKTAFLNG+L EEIYM++P+G  L++  G VCKL+KSLYGLKQAPK 
Sbjct: 896  LAASHGLLIHQMDVKTAFLNGELEEEIYMDQPDGYVLESQEGMVCKLLKSLYGLKQAPKQ 955

Query: 188  WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
            WHEKFD  +   G+ V+E+DKC+Y +   G+ V++CLYVDD+LI GT L ++   K+FLS
Sbjct: 956  WHEKFDNTLTSAGFVVNEADKCVYYRCGGGEGVILCLYVDDILIFGTSLNVIEEVKDFLS 1015


>emb|CAI44606.1| P0650D04.10 [Oryza sativa Japonica Group]
          Length = 1194

 Score =  253 bits (645), Expect(2) = 2e-81
 Identities = 129/236 (54%), Positives = 164/236 (69%), Gaps = 18/236 (7%)
 Frame = -3

Query: 662  DPQTFQEAMQSKDVHLWKEAIDDEMDSLIQ-----NHTWELV---DV--------PEGAR 531
            D   F+     KD H       + + S I       HT ELV   DV        P G +
Sbjct: 671  DATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRKRPYGCK 730

Query: 530  PISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIAWAAI 351
            P+ CKW+FK+KLRPDGTIEKYKARLVAKG++QKEG DFFD Y+PV R+TTIRVL++ AA 
Sbjct: 731  PVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAAS 790

Query: 350  KKFVIHQMDVKTAFLNGDLTEEIYMEKPEG--LDAPAGKVCKLIKSLYGLKQAPKLWHEK 177
               ++HQMDVKTAFLNG+L EEIYM +P+G  ++   GKVCKL+KSLYGLKQAPK WHEK
Sbjct: 791  HGLLVHQMDVKTAFLNGELDEEIYMYQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEK 850

Query: 176  FDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
            FD+ +   G+ V+E+DKC+Y +   G+ V++CLYVDD+LI GT+LE++   K FLS
Sbjct: 851  FDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLS 906



 Score = 78.6 bits (192), Expect(2) = 2e-81
 Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
 Frame = -1

Query: 1012 DSTPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRFL- 836
            D TP+++W G    L  L+ WGCLA V +P  ++ KLGPK   CVFLG+A  S A RFL 
Sbjct: 594  DKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAYHSIAYRFLI 653

Query: 835  ------DLGTNSIIEARDAEFFEDKF 776
                  D+   +I+E+RDA FFE  F
Sbjct: 654  VKSEVPDMHVGTIMESRDATFFESFF 679


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  308 bits (790), Expect = 3e-81
 Identities = 145/240 (60%), Positives = 185/240 (77%), Gaps = 3/240 (1%)
 Frame = -3

Query: 719  KRIRKQKDFGDDFITFNVED-PQTFQEAMQSKDVHLWKEAIDDEMDSLIQNHTWELVDVP 543
            KR R  K FGDD+I + V+D P+T +EA  S D   WKEA+  EMDS++ N TWE+V+ P
Sbjct: 735  KRQRTAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERP 794

Query: 542  EGARPISCKWIFKRKLRPDGTIEKYKARLVAKGFSQKEGIDFFDIYAPVCRITTIRVLIA 363
             G +P+ CKW+FK+KLRPDGTIEKYKARLVAKG++QKEG DFFD Y+PV R+TTIRVL+A
Sbjct: 795  YGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLA 854

Query: 362  WAAIKKFVIHQMDVKTAFLNGDLTEEIYMEKPEG--LDAPAGKVCKLIKSLYGLKQAPKL 189
             AA    ++HQMDVKTAFLNG+L EEIYM++P+G  L+   G VCKL+KSLYGLKQAPK 
Sbjct: 855  LAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQEGMVCKLLKSLYGLKQAPKQ 914

Query: 188  WHEKFDRIVRGNGYRVSESDKCLYIKVAEGKVVVICLYVDDMLIIGTDLEIVTSAKEFLS 9
            WHEKFD  +   G+ V+E+DKC+Y +   G+ V++CLYVDD+LI GT L ++   K+FLS
Sbjct: 915  WHEKFDNTLTSAGFVVNEADKCVYYRYGGGEGVILCLYVDDILIFGTSLNVIEEVKDFLS 974



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
 Frame = -1

Query: 1006 TPHQLWKGYPDPLDNLKVWGCLAYVRIPDIRRPKLGPKANRCVFLGFAEDSDACRFL--- 836
            TP + W+     L +L+ WGCLA V +P  ++ KLGPK   CVFLG+A  S   RFL   
Sbjct: 606  TPFEEWERKKLNLSHLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAIHSVGYRFLIVN 665

Query: 835  ----DLGTNSIIEARDAEFFEDKF 776
                D+   +I E+RDA FFE++F
Sbjct: 666  SGVPDMRVGTITESRDATFFENEF 689