BLASTX nr result
ID: Anemarrhena21_contig00005937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00005937
(465 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009399996.1| PREDICTED: pentatricopeptide repeat-containi... 169 7e-40
ref|XP_010908404.1| PREDICTED: pentatricopeptide repeat-containi... 169 9e-40
ref|XP_008805021.1| PREDICTED: pentatricopeptide repeat-containi... 161 2e-37
ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containi... 139 1e-30
ref|XP_009795979.1| PREDICTED: pentatricopeptide repeat-containi... 137 2e-30
ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containi... 137 2e-30
ref|XP_010244205.1| PREDICTED: pentatricopeptide repeat-containi... 135 1e-29
ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containi... 134 2e-29
ref|XP_011098561.1| PREDICTED: pentatricopeptide repeat-containi... 134 3e-29
ref|XP_009602284.1| PREDICTED: pentatricopeptide repeat-containi... 132 7e-29
ref|XP_004502213.1| PREDICTED: pentatricopeptide repeat-containi... 132 9e-29
ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi... 131 2e-28
ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containi... 131 2e-28
ref|XP_007163838.1| hypothetical protein PHAVU_001G268500g [Phas... 129 1e-27
ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Caps... 128 1e-27
ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containi... 128 1e-27
ref|XP_008379319.1| PREDICTED: pentatricopeptide repeat-containi... 128 2e-27
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,... 127 2e-27
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar... 127 3e-27
ref|XP_012082721.1| PREDICTED: pentatricopeptide repeat-containi... 127 4e-27
>ref|XP_009399996.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 679
Score = 169 bits (428), Expect = 7e-40
Identities = 89/152 (58%), Positives = 109/152 (71%)
Frame = -3
Query: 457 SSSNRDLWINPQRSTHHSQSRTGKNGGPRHRYIDRSVDMSALLSSLRCTSTPDELHAVMS 278
+++ RD+W + HH T + R+ YIDRSVDM+ALL L T+T +ELHAVMS
Sbjct: 54 AAAGRDVWRSHDLHHHHDLHPTRRRPPQRNHYIDRSVDMAALLYQLSQTTTSEELHAVMS 113
Query: 277 PFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVAMRNALRA 98
P++ ++ LS RF++SLLSREPD+RR LALLDWM AGY PS FA+NV +RNALRA
Sbjct: 114 PYLGGPAGEYCLSPRFVVSLLSREPDHRRSLALLDWMVDAAGYQPSAFAFNVVLRNALRA 173
Query: 97 RQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
QFPLA+GLLHEMR P SPD VTYSTLIS
Sbjct: 174 AQFPLAIGLLHEMRRLRRP-SPDPVTYSTLIS 204
>ref|XP_010908404.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Elaeis guineensis]
Length = 674
Score = 169 bits (427), Expect = 9e-40
Identities = 90/139 (64%), Positives = 105/139 (75%), Gaps = 9/139 (6%)
Frame = -3
Query: 391 GKNGGPR---------HRYIDRSVDMSALLSSLRCTSTPDELHAVMSPFIDSSTQKHLLS 239
G+ GG R H Y+DRSVDM ALLS+L T+TP+EL+AVMSP++ + +H LS
Sbjct: 58 GRRGGGRDVWRRAPRNHHYVDRSVDMDALLSALSQTTTPEELYAVMSPYLGTPDGRHQLS 117
Query: 238 LRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVAMRNALRARQFPLALGLLHEM 59
RFM+SLLSREPD+RR LALLDWM A Y PSVFA+NV +RNALRARQFPLALGLLHEM
Sbjct: 118 PRFMVSLLSREPDWRRSLALLDWMLDIASYPPSVFAFNVVLRNALRARQFPLALGLLHEM 177
Query: 58 RSGPYPLSPDRVTYSTLIS 2
R LSPD VTYSTL+S
Sbjct: 178 RLS-LSLSPDAVTYSTLVS 195
>ref|XP_008805021.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Phoenix dactylifera]
Length = 667
Score = 161 bits (407), Expect = 2e-37
Identities = 88/143 (61%), Positives = 106/143 (74%), Gaps = 8/143 (5%)
Frame = -3
Query: 406 SQSRTGKNGG-------PRHR-YIDRSVDMSALLSSLRCTSTPDELHAVMSPFIDSSTQK 251
S + G+ GG PR++ Y+DRSVDM ALL +L T+TP+ELHAVMSP++ + +
Sbjct: 47 SSTGGGRGGGRDVWRRTPRNQHYVDRSVDMDALLLALSQTTTPEELHAVMSPYLGTPDGR 106
Query: 250 HLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVAMRNALRARQFPLALGL 71
H LS RFM+SLLSREPD+ R LALLDWM A Y PS+FA+NV +RNALRARQF LALGL
Sbjct: 107 HQLSPRFMVSLLSREPDWSRSLALLDWMLDVASYPPSIFAFNVVLRNALRARQFTLALGL 166
Query: 70 LHEMRSGPYPLSPDRVTYSTLIS 2
LHEMR LSPD VTYSTL+S
Sbjct: 167 LHEMRLS-LSLSPDAVTYSTLVS 188
>ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 139 bits (349), Expect = 1e-30
Identities = 79/154 (51%), Positives = 103/154 (66%)
Frame = -3
Query: 463 SSSSSNRDLWINPQRSTHHSQSRTGKNGGPRHRYIDRSVDMSALLSSLRCTSTPDELHAV 284
++++ +D+W T S S T + R +Y DRSVDM LL+++ T DEL+AV
Sbjct: 38 AATAMAKDVW------TRTSSSNTSRQRSRRQQYWDRSVDMEELLAAIGQTQNEDELYAV 91
Query: 283 MSPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVAMRNAL 104
MSP+ LS+RFM+SLLSREPD++R LALLDW++ A YSPS+FAYNV +RN L
Sbjct: 92 MSPY-----NGRQLSMRFMVSLLSREPDWQRALALLDWINDKALYSPSLFAYNVLLRNVL 146
Query: 103 RARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
RA+Q+ LA GL EMR LSPDR TYSTLI+
Sbjct: 147 RAKQWHLAHGLFDEMRQ--KGLSPDRYTYSTLIT 178
>ref|XP_009795979.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Nicotiana sylvestris]
Length = 678
Score = 137 bits (346), Expect = 2e-30
Identities = 83/163 (50%), Positives = 107/163 (65%), Gaps = 9/163 (5%)
Frame = -3
Query: 463 SSSSSNRDLWINPQRSTHHSQSRTGKNGGPRHR---------YIDRSVDMSALLSSLRCT 311
S++SSN+D+W +T S +T P HR ++D SVDM LLSS+R T
Sbjct: 47 SATSSNKDVWRKTTTTTPLSL-KTPPFSSPHHRPYRRRQQSSHLDHSVDMDDLLSSIRQT 105
Query: 310 STPDELHAVMSPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFA 131
+ EL A+MSP+ Q LS+RFM++LLSRE D++R LALLDW++ A Y+PSVFA
Sbjct: 106 TNEHELFALMSPY-----QNRNLSMRFMVTLLSRESDWQRSLALLDWINEVALYTPSVFA 160
Query: 130 YNVAMRNALRARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
YNVA+RN LRA+Q+ LA GL EMR LSPDR TYSTLI+
Sbjct: 161 YNVALRNVLRAKQWRLAYGLFDEMRQ--RALSPDRYTYSTLIT 201
>ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 137 bits (346), Expect = 2e-30
Identities = 76/148 (51%), Positives = 102/148 (68%)
Frame = -3
Query: 445 RDLWINPQRSTHHSQSRTGKNGGPRHRYIDRSVDMSALLSSLRCTSTPDELHAVMSPFID 266
+D+W S++ S+ R+ + + +Y+DRSVDM LL+++ T DEL+AVMSP+
Sbjct: 48 KDVWTRTS-SSNTSRQRSSSSSRRQQQYLDRSVDMEVLLAAIGQTQNEDELYAVMSPY-- 104
Query: 265 SSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVAMRNALRARQFP 86
LS+RFM+SLLSREPD++R LALLDW++ A Y PS+FAYNV +RN LRA+Q+
Sbjct: 105 ---NGRQLSMRFMVSLLSREPDWQRALALLDWINDKALYRPSLFAYNVLLRNVLRAKQWH 161
Query: 85 LALGLLHEMRSGPYPLSPDRVTYSTLIS 2
LA GL EMR LSPDR TYSTLI+
Sbjct: 162 LAHGLFDEMRQ--KGLSPDRYTYSTLIT 187
>ref|XP_010244205.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Nelumbo nucifera]
Length = 693
Score = 135 bits (340), Expect = 1e-29
Identities = 86/168 (51%), Positives = 106/168 (63%), Gaps = 14/168 (8%)
Frame = -3
Query: 463 SSSSSNRDLWI---NPQRSTHHSQSRTGKNGGPRHRYI-----------DRSVDMSALLS 326
SSS S +D+W N S+ S +G++ +H D SVDM LLS
Sbjct: 55 SSSPSIKDVWRRSDNVSSSSSSSMVSSGRHIHQKHYKYQRDKQQQVLCWDHSVDMDDLLS 114
Query: 325 SLRCTSTPDELHAVMSPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYS 146
S+R TST EL+A+MSP+ + LSLRFM+SLLS E D++R LALLDWM A YS
Sbjct: 115 SIRQTSTEQELYALMSPY-----KGRQLSLRFMVSLLSHESDWQRSLALLDWMIEEAAYS 169
Query: 145 PSVFAYNVAMRNALRARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
PSVFAYNV +RN LRA+Q+ LA GL+ EMRS LSPDR TYSTLI+
Sbjct: 170 PSVFAYNVVIRNVLRAKQWDLATGLVDEMRS--RSLSPDRFTYSTLIT 215
>ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Solanum tuberosum]
Length = 668
Score = 134 bits (337), Expect = 2e-29
Identities = 77/154 (50%), Positives = 102/154 (66%)
Frame = -3
Query: 463 SSSSSNRDLWINPQRSTHHSQSRTGKNGGPRHRYIDRSVDMSALLSSLRCTSTPDELHAV 284
S++SS +D+W SQ R + + ++D SVDM LLSS+ T+ EL A+
Sbjct: 47 SATSSTKDVWRKTTPPFSPSQHRPYRRNPQSNSFLDHSVDMDDLLSSIGQTTNEHELFAL 106
Query: 283 MSPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVAMRNAL 104
MSP+ + LS+RFM++LLSRE D++R LALLDW++ A Y+PSVFAYNVA+RN L
Sbjct: 107 MSPYKGRN-----LSMRFMVTLLSRESDWQRSLALLDWINEVALYTPSVFAYNVALRNVL 161
Query: 103 RARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
RA+Q+ LA GL EMR LSPDR TYSTLI+
Sbjct: 162 RAKQWQLAYGLFDEMRQ--RALSPDRYTYSTLIT 193
>ref|XP_011098561.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Sesamum indicum]
Length = 676
Score = 134 bits (336), Expect = 3e-29
Identities = 79/159 (49%), Positives = 102/159 (64%), Gaps = 7/159 (4%)
Frame = -3
Query: 457 SSSNRDLW-------INPQRSTHHSQSRTGKNGGPRHRYIDRSVDMSALLSSLRCTSTPD 299
SS +D+W + P +T H R +N ++D SVDM LLSS+ TS
Sbjct: 53 SSPAKDVWRRKTHVPLTPTNTTPHQPHRRNRNSA----FLDHSVDMEELLSSIGQTSDEH 108
Query: 298 ELHAVMSPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVA 119
EL+++MS + S LS+RFM++LLSREPD++R LALLDWM+ A YSPSVFAYNV
Sbjct: 109 ELYSLMSLYKSRS-----LSVRFMVALLSREPDWQRSLALLDWMNEEALYSPSVFAYNVV 163
Query: 118 MRNALRARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
+RN LRA+Q+ +A GL EMR LSPDR TYSTLI+
Sbjct: 164 LRNVLRAKQWEVAYGLFDEMRG--RALSPDRYTYSTLIT 200
>ref|XP_009602284.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Nicotiana tomentosiformis]
Length = 676
Score = 132 bits (333), Expect = 7e-29
Identities = 79/163 (48%), Positives = 104/163 (63%), Gaps = 9/163 (5%)
Frame = -3
Query: 463 SSSSSNRDLWINPQRSTHHSQSRTGKNGGPRHR---------YIDRSVDMSALLSSLRCT 311
S++SSN+D+W +T +T P HR ++D SVDM LL S+ T
Sbjct: 44 SATSSNKDVWRKTAATTTPLSLKTPPFSSPHHRPYRRRQQSLHLDHSVDMDDLLLSIGQT 103
Query: 310 STPDELHAVMSPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFA 131
+ EL A+MSP+ Q LS+RFM++LLSRE D++R LALLDW++ A Y+PSVFA
Sbjct: 104 TNEHELFALMSPY-----QNRNLSMRFMVTLLSREFDWQRSLALLDWINEVALYTPSVFA 158
Query: 130 YNVAMRNALRARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
YNVA+RN LRA+++ LA GL EMR LSPDR TYSTLI+
Sbjct: 159 YNVALRNVLRAKKWRLAYGLFDEMRQ--RALSPDRYTYSTLIT 199
>ref|XP_004502213.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Cicer arietinum]
Length = 669
Score = 132 bits (332), Expect = 9e-29
Identities = 79/160 (49%), Positives = 106/160 (66%), Gaps = 6/160 (3%)
Frame = -3
Query: 463 SSSSSNRDLWINPQRS----THHSQSRTGKNGGPRHR--YIDRSVDMSALLSSLRCTSTP 302
+ S S +D+W RS T Q RT + +H+ Y+DR+V+M+ LL+S+ T
Sbjct: 37 TKSISAKDVWTRTPRSPFSNTQQQQRRT-RTQQQQHQPTYLDRTVNMNELLTSIGQTQNV 95
Query: 301 DELHAVMSPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNV 122
+LHAVMSP+ ++ LS+RFM+SLLSREPD++R LALLDWM+ A YSPSV AYNV
Sbjct: 96 QQLHAVMSPYNGTN-----LSIRFMVSLLSREPDWQRALALLDWMNEKARYSPSVSAYNV 150
Query: 121 AMRNALRARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
+RN LRA+Q+ A GL EMR +SPD+ TYSTLI+
Sbjct: 151 VLRNVLRAKQWLFAHGLFDEMRQ--KGISPDKYTYSTLIT 188
>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product
[Vitis vinifera]
Length = 675
Score = 131 bits (329), Expect = 2e-28
Identities = 75/150 (50%), Positives = 102/150 (68%), Gaps = 2/150 (1%)
Frame = -3
Query: 445 RDLW--INPQRSTHHSQSRTGKNGGPRHRYIDRSVDMSALLSSLRCTSTPDELHAVMSPF 272
+D+W + + ++ S SR + R ++D SVDM LL+S+ TS EL+++MSP+
Sbjct: 56 KDVWRRLPDETTSLLSSSRQHRPRKQRVVHLDHSVDMDELLASISQTSNEQELYSLMSPY 115
Query: 271 IDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVAMRNALRARQ 92
+ LS+RFM+SLLSREPD++R LALLDW++ A YSPSVFAYNV +RN LRA+Q
Sbjct: 116 -----KGRQLSIRFMVSLLSREPDWQRSLALLDWINEEASYSPSVFAYNVVIRNVLRAKQ 170
Query: 91 FPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
+ LA GL EMR L+PDR TYSTLI+
Sbjct: 171 WELAHGLFEEMRQ--RALAPDRYTYSTLIT 198
>ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Fragaria vesca subsp. vesca]
Length = 672
Score = 131 bits (329), Expect = 2e-28
Identities = 74/158 (46%), Positives = 102/158 (64%), Gaps = 7/158 (4%)
Frame = -3
Query: 454 SSNRDLWINPQRSTHHSQSRTGKNGGPRHR-------YIDRSVDMSALLSSLRCTSTPDE 296
S+ +D+W NP+ + S PRHR ++D ++DM L +S+R T +
Sbjct: 50 SATKDIWRNPKTTPSSPPSHP-----PRHRRKLQGTAFLDHTIDMDDLAASIRATQNDHD 104
Query: 295 LHAVMSPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVAM 116
L++++SP+ S LS+RFM+SLLSREPD+RR LA+LDW++ A Y+PSVFAYNV +
Sbjct: 105 LNSLLSPYKSRS-----LSIRFMVSLLSREPDWRRSLAILDWINDVALYTPSVFAYNVVL 159
Query: 115 RNALRARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
RN LRA Q+ LA GL EMR L+PDR TYSTLI+
Sbjct: 160 RNVLRAGQWDLAHGLFDEMRH--RALAPDRYTYSTLIT 195
>ref|XP_007163838.1| hypothetical protein PHAVU_001G268500g [Phaseolus vulgaris]
gi|561037302|gb|ESW35832.1| hypothetical protein
PHAVU_001G268500g [Phaseolus vulgaris]
Length = 677
Score = 129 bits (323), Expect = 1e-27
Identities = 76/150 (50%), Positives = 100/150 (66%), Gaps = 2/150 (1%)
Frame = -3
Query: 445 RDLWINPQRSTHHSQ--SRTGKNGGPRHRYIDRSVDMSALLSSLRCTSTPDELHAVMSPF 272
+D+W S S G + + ++DRS+DM LL+++ T DEL+AVMSP+
Sbjct: 55 KDVWSRTSGSASSSPIPRERGSSRQQQATFLDRSMDMEELLAAIGETQNEDELYAVMSPY 114
Query: 271 IDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVAMRNALRARQ 92
S Q LS+RFM+SLLSREPD++R +ALLDW++ A YSPS+FAYNV +RN LRA+Q
Sbjct: 115 --SGRQ---LSMRFMVSLLSREPDWQRTVALLDWINEKALYSPSLFAYNVVLRNVLRAKQ 169
Query: 91 FPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
+ LA GL EMR LSPDR TYSTLI+
Sbjct: 170 WHLAHGLFDEMRH--KGLSPDRYTYSTLIT 197
>ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Capsella rubella]
gi|482554761|gb|EOA18954.1| hypothetical protein
CARUB_v10007588mg [Capsella rubella]
Length = 679
Score = 128 bits (322), Expect = 1e-27
Identities = 73/155 (47%), Positives = 98/155 (63%), Gaps = 1/155 (0%)
Frame = -3
Query: 463 SSSSSNRDLWINPQRSTHHSQSRTGKNGG-PRHRYIDRSVDMSALLSSLRCTSTPDELHA 287
SSSS + +W Q +S + K+ R ++D VDM LL+S+ T EL +
Sbjct: 53 SSSSQTKKVWTKQQPEKKNSSTTLRKHRRYQRSAFLDHDVDMDELLASIHQTQNEKELFS 112
Query: 286 VMSPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVAMRNA 107
++S + D LS+RFM+SLLSRE D++R LALLDW+H A Y+PSV+AYNV +RN
Sbjct: 113 LLSSYKDGQ-----LSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVYAYNVVLRNV 167
Query: 106 LRARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
LRA+QF +A GL EMR L+PDR TYSTLI+
Sbjct: 168 LRAKQFDIAHGLFDEMRQ--RALAPDRYTYSTLIT 200
>ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Solanum lycopersicum]
Length = 665
Score = 128 bits (322), Expect = 1e-27
Identities = 75/153 (49%), Positives = 99/153 (64%)
Frame = -3
Query: 460 SSSSNRDLWINPQRSTHHSQSRTGKNGGPRHRYIDRSVDMSALLSSLRCTSTPDELHAVM 281
S S+ +D+W S+ R + ++D SVDM LLSS+ T+ EL A+M
Sbjct: 45 SLSATKDVWRKTTPPFSPSKYRPYRRNPQSTSFLDHSVDMDDLLSSIGQTANEHELFALM 104
Query: 280 SPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVAMRNALR 101
SP+ + LS+RFM++LLSRE D++R LALLDW++ A Y+PSVFAYNVA+RN LR
Sbjct: 105 SPYKGRN-----LSMRFMVTLLSRESDWQRSLALLDWINEVALYTPSVFAYNVALRNVLR 159
Query: 100 ARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
A+Q+ LA GL EMR LSPDR TYSTLI+
Sbjct: 160 AKQWQLAYGLFDEMRQ--RALSPDRYTYSTLIT 190
>ref|XP_008379319.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Malus domestica]
Length = 677
Score = 128 bits (321), Expect = 2e-27
Identities = 79/161 (49%), Positives = 107/161 (66%), Gaps = 7/161 (4%)
Frame = -3
Query: 463 SSSSSNRDLWIN-PQRSTHHSQSRTG--KNGGPRHR----YIDRSVDMSALLSSLRCTST 305
SSSS +R++W PQ T S S T +N PR++ ++D SVDM LLSS+ T
Sbjct: 47 SSSSPSRNVWRRTPQLKTXPSPSSTPSHQNRRPRNQQGPSHLDHSVDMDELLSSIGQTQN 106
Query: 304 PDELHAVMSPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYN 125
EL+++MS + + LS+RFM+SLLSRE D++R LA+LDW++ A Y+PSVFAYN
Sbjct: 107 EQELYSLMSAY-----KGRQLSIRFMVSLLSRESDWQRSLAILDWINEEALYTPSVFAYN 161
Query: 124 VAMRNALRARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
V +RN LRA+Q+ +A GL EMR L+PDR TYSTLI+
Sbjct: 162 VVIRNVLRAKQWEIAHGLFDEMRQ--RALAPDRYTYSTLIT 200
>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 654
Score = 127 bits (320), Expect = 2e-27
Identities = 73/154 (47%), Positives = 100/154 (64%)
Frame = -3
Query: 463 SSSSSNRDLWINPQRSTHHSQSRTGKNGGPRHRYIDRSVDMSALLSSLRCTSTPDELHAV 284
SSS++ RD+W Q++T Y+D SVDM LL S+ T EL+++
Sbjct: 45 SSSATKRDMWTRTQKTTPS--------------YLDHSVDMKQLLISISQTQNEVELYSL 90
Query: 283 MSPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVAMRNAL 104
+SP+ ++ LS+RFM+SL+S+E D++R LALLDW++ A YSPSVFAYNV +RN L
Sbjct: 91 LSPY-----KERQLSIRFMVSLISQEADWQRSLALLDWINEVARYSPSVFAYNVVLRNVL 145
Query: 103 RARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
RA+++ LA GL EMR LSPDR TYSTLI+
Sbjct: 146 RAKKWDLAHGLFDEMRQ--RALSPDRYTYSTLIT 177
>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product
[Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 678
Score = 127 bits (319), Expect = 3e-27
Identities = 74/156 (47%), Positives = 101/156 (64%), Gaps = 2/156 (1%)
Frame = -3
Query: 463 SSSSSNRDLWIN-PQRSTHHSQSRTGKNGG-PRHRYIDRSVDMSALLSSLRCTSTPDELH 290
S S+ N+ +W P+++T S K+ R ++D +VDM LL+S+ T EL
Sbjct: 50 SESTQNKKVWRKQPEKNTTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELF 109
Query: 289 AVMSPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYNVAMRN 110
+++S + D LS+RFM+SLLSRE D++R LALLDW+H A Y+PSVFAYNV +RN
Sbjct: 110 SLLSTYKDRQ-----LSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRN 164
Query: 109 ALRARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
LRA+QF +A GL EMR L+PDR TYSTLI+
Sbjct: 165 VLRAKQFDIAHGLFDEMRQ--RALAPDRYTYSTLIT 198
>ref|XP_012082721.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Jatropha curcas]
gi|643739719|gb|KDP45457.1| hypothetical protein
JCGZ_09706 [Jatropha curcas]
Length = 667
Score = 127 bits (318), Expect = 4e-27
Identities = 75/161 (46%), Positives = 99/161 (61%), Gaps = 9/161 (5%)
Frame = -3
Query: 457 SSSNRDLWINPQRSTHHSQSRTGKNGGPRHR---------YIDRSVDMSALLSSLRCTST 305
S++ RD+W S T NG R+R Y+D S+DM LL+S+ T
Sbjct: 48 SATKRDVWT----------SNTTNNGTTRYRPRRQKRQPVYLDHSIDMDELLTSISQTQN 97
Query: 304 PDELHAVMSPFIDSSTQKHLLSLRFMISLLSREPDYRRCLALLDWMHGPAGYSPSVFAYN 125
EL+ ++SPF D LS+RFM+SLLSRE D++R LA+LDW++ A YSPSVFAYN
Sbjct: 98 EQELYCLLSPFKDRQ-----LSIRFMVSLLSRESDWQRSLAVLDWINDIARYSPSVFAYN 152
Query: 124 VAMRNALRARQFPLALGLLHEMRSGPYPLSPDRVTYSTLIS 2
V +RN LR +Q+ +A GL EMR L+PDR TYSTLI+
Sbjct: 153 VVLRNVLRDKQWEVAHGLFDEMRQ--RALAPDRYTYSTLIT 191