BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00005443
         (2365 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB-...   540   e-150
ref|XP_010918654.1| PREDICTED: RNA polymerase sigma factor sigB-...   521   e-144
ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-...   518   e-143
ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-...   517   e-143
ref|XP_011623893.1| PREDICTED: RNA polymerase sigma factor sigB ...   499   e-138
gb|ERM94758.1| hypothetical protein AMTR_s00011p00258380 [Ambore...   496   e-137
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-...   494   e-136
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-...   486   e-134
ref|XP_009409922.1| PREDICTED: RNA polymerase sigma factor sigB-...   483   e-133
ref|XP_009408073.1| PREDICTED: RNA polymerase sigma factor sigB-...   482   e-133
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ...   480   e-132
ref|XP_008775892.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   472   e-130
ref|XP_010251516.1| PREDICTED: RNA polymerase sigma factor sigB-...   471   e-129
gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sin...   471   e-129
gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arbor...   470   e-129
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ...   469   e-129
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ...   468   e-129
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   468   e-129
ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB ...   467   e-128
ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB ...   466   e-128

>ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB-like [Phoenix
            dactylifera]
          Length = 566

 Score =  540 bits (1390), Expect = e-150
 Identities = 311/553 (56%), Positives = 357/553 (64%), Gaps = 18/553 (3%)
 Frame = -1

Query: 1978 MASLVPPFYGPSL-----------HQTPQAKTRCPVNFRAQCISSQMTAVIDFEKTQIPT 1832
            MA LVP F  PS+           H +  +K R  V FR+ C+S+   AVID ++  IP+
Sbjct: 1    MACLVPQFKCPSISPDAHFRPLSHHPSLNSKARDSVCFRSPCVSTLTAAVIDIQR--IPS 58

Query: 1831 LEAYSTS-------RYIGAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1673
            LEA+STS        Y+GA+G   KT                                  
Sbjct: 59   LEAHSTSLDATRPLTYVGAVGPPMKTSIEATLATETLLTGEEAVIAAAAAEAVALARAAV 118

Query: 1672 XXXXXXAQMKGKDLSAKLDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEG 1493
                  AQ+ G D S KL++SE+F SEAD   LERVRLTEME ++ +NNS   +T+P E 
Sbjct: 119  EVAKDAAQIIGNDPSVKLEKSEDFSSEADAFRLERVRLTEMELIRTTNNSTPTDTEPHEA 178

Query: 1492 HITPNPSKDEGISSLLHNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVX 1313
                +PS+   +S+L H +LE  +MQ  + +                         + V 
Sbjct: 179  K---DPSQGTDVSNLTHKELESQQMQYPESIAVRSGRQTDRKARRTRAAEKAAVSVIPVK 235

Query: 1312 XXXXXXXKRTAVPEIDYSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXX 1133
                   KR+   E+DYSDPLRYLRGTT+T             E                
Sbjct: 236  SGSTSKKKRSTFQEVDYSDPLRYLRGTTSTSKLLTAAEELELSEAIQDMLKLERLQQELA 295

Query: 1132 XRNGSPPTFAQWATAAGVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQ 953
             R+G  PTFAQWA AAGVD RTLRKRLNYG++CKDKMIKSNIRLVISIAKN+QGAGMNLQ
Sbjct: 296  ERHGGQPTFAQWAAAAGVDQRTLRKRLNYGRFCKDKMIKSNIRLVISIAKNYQGAGMNLQ 355

Query: 952  DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYR 773
            DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLS+QSRTIRLP HMVEATYR
Sbjct: 356  DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPFHMVEATYR 415

Query: 772  VREARKQLYSENGRYPHNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEV 593
            VREA+KQLYSENGRYP  +E+AEA GL+MKR  AVMLTPKAPRSLDQKIGINQSLKPSEV
Sbjct: 416  VREAKKQLYSENGRYPDYQEVAEATGLSMKRLNAVMLTPKAPRSLDQKIGINQSLKPSEV 475

Query: 592  IADPEALTSEEILIKQIVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGV 413
            IADPEA TSEEILIKQ   +DL+KVLD+L PREKQV+RWRFGL DG  KTLQEIGE MGV
Sbjct: 476  IADPEAETSEEILIKQFRKQDLNKVLDTLNPREKQVVRWRFGLEDGMTKTLQEIGELMGV 535

Query: 412  SRERIRQIESCAF 374
            SRERIRQIES AF
Sbjct: 536  SRERIRQIESSAF 548


>ref|XP_010918654.1| PREDICTED: RNA polymerase sigma factor sigB-like [Elaeis guineensis]
          Length = 566

 Score =  521 bits (1341), Expect = e-144
 Identities = 304/555 (54%), Positives = 357/555 (64%), Gaps = 20/555 (3%)
 Frame = -1

Query: 1978 MASLVPPFYGPSLHQTPQA-------------KTRCPVNFRAQCISSQMTAVIDFEKTQI 1838
            MA LVP F  PS+  +P+A             K R  V FR+QC+S+Q  AVID ++  I
Sbjct: 1    MACLVPQFKCPSI--SPEAHFRSVSHLPSLNSKARDSVCFRSQCVSTQTAAVIDIQR--I 56

Query: 1837 PTLEAYSTS-------RYIGAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1679
            P+LEA S S        Y+G++G   KT                                
Sbjct: 57   PSLEARSNSLDDTRPLTYVGSVGPPMKTGIEATLATETLLTGEEAVVAAAAAEAVALARA 116

Query: 1678 XXXXXXXXAQMKGKDLSAKLDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQ 1499
                    AQ+   D S KL++SE+F SEAD   LERVR  EM  ++ +++S   +T+P 
Sbjct: 117  AVEVAKDAAQIIRNDPSVKLEKSEDFSSEADAFWLERVRHNEMGLIRTTHHSTPTDTEPH 176

Query: 1498 EGHITPNPSKDEGISSLLHNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVL 1319
            E     +PS+D  +S+L +N+L+  +MQ  + +                         + 
Sbjct: 177  EAK---DPSQDIDVSNLTNNELQSQQMQYPESIAVRSGRQTERKARRARAEEKAAVSVIP 233

Query: 1318 VXXXXXXXXKRTAVPEIDYSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXX 1139
            +        KR+A  EIDYSDPL YLRGTT+T             +G             
Sbjct: 234  IKSGSSSKKKRSAFQEIDYSDPLHYLRGTTSTSKLLTAAEELELSKGIQDLLKLEKLREE 293

Query: 1138 XXXRNGSPPTFAQWATAAGVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMN 959
               R+G  PTFAQWA AAGVD RTLRKRLNYG +CKDKMIKSNIRLVISIAKN+QGAGMN
Sbjct: 294  LAERHGGQPTFAQWAAAAGVDQRTLRKRLNYGGFCKDKMIKSNIRLVISIAKNYQGAGMN 353

Query: 958  LQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEAT 779
            LQDLVQEGCRGLVKGAE+FDA KGFKFSTYAHWWIKQAVRRSLS+QSRTIRLPIHMVEAT
Sbjct: 354  LQDLVQEGCRGLVKGAERFDALKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPIHMVEAT 413

Query: 778  YRVREARKQLYSENGRYPHNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPS 599
            YRVREA+KQLYSENGR+P  EE+AEA GL+MKR  AVMLTPKAPRSLDQKIGINQSLKPS
Sbjct: 414  YRVREAKKQLYSENGRHPDYEEVAEATGLSMKRLNAVMLTPKAPRSLDQKIGINQSLKPS 473

Query: 598  EVIADPEALTSEEILIKQIVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESM 419
            EVIADP+A TSEEILIKQ + +DL+KVLD+L PREKQV+RWRFGL DG  KTLQEIGE M
Sbjct: 474  EVIADPKAETSEEILIKQFMKQDLNKVLDTLNPREKQVVRWRFGLEDGMTKTLQEIGELM 533

Query: 418  GVSRERIRQIESCAF 374
            GVSRERIRQIES AF
Sbjct: 534  GVSRERIRQIESSAF 548


>ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
            subsp. malaccensis]
          Length = 567

 Score =  518 bits (1333), Expect = e-143
 Identities = 308/569 (54%), Positives = 357/569 (62%), Gaps = 16/569 (2%)
 Frame = -1

Query: 1978 MASLVPPFYGPSLHQTPQA-------KTRCPVNFRAQCISSQMTAVIDFEKTQIPTLEAY 1820
            MA LVP F  PS     +        + R  V FR++C+ S  TAVIDFE  QIP LEA+
Sbjct: 1    MACLVPQFKPPSSDSLARPSLPSLHPRAREFVCFRSRCVLSPTTAVIDFE--QIPKLEAH 58

Query: 1819 STSR---------YIGAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1667
            STS          Y G++G   KT                                    
Sbjct: 59   STSSSTCAIRPLTYSGSVGPPIKTSIEATLASETLLQCDEAVIAAAAAEAVALARAALEL 118

Query: 1666 XXXXAQMKGKDLSAKLDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHI 1487
                AQM GK+LSA++++ E  PSEADI  LERV LTE E    +N+ A  ET P E ++
Sbjct: 119  AKDAAQMIGKNLSAEVEKLEETPSEADIKWLERVSLTETEWAGFTNHPAATETIPFEYNV 178

Query: 1486 TPNPSKDEGISSLLHNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXX 1307
            + +      ISS   ++ E   MQ  + +                         + +   
Sbjct: 179  SLDQYASTDISSSTFDEPEFQGMQHIENIAVRSGRQIERRARRARAADKATAGVISLKSG 238

Query: 1306 XXXXXKRTAVPEIDYSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXR 1127
                 KR+A  EIDYSDPLRYLRGTT+T             EG                R
Sbjct: 239  SSGKKKRSAFQEIDYSDPLRYLRGTTSTSKLLTAAEEIELSEGIQSLLKLERLQQDLAER 298

Query: 1126 NGSPPTFAQWATAAGVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDL 947
            NG  PTFAQWA AAG+D +TLRKR+N+G YCKDKMIKSNIRLVISIAKN+QGAG+NLQDL
Sbjct: 299  NGCQPTFAQWAAAAGIDQKTLRKRINHGTYCKDKMIKSNIRLVISIAKNYQGAGINLQDL 358

Query: 946  VQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVR 767
            VQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR+SLS+QSRTIRLP HMVEATYRVR
Sbjct: 359  VQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRVR 418

Query: 766  EARKQLYSENGRYPHNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIA 587
            EA+K+LYSENGR+P NEE+AEAAGL+MKR  AVMLTPKAPRSLDQKIGINQSLK SEVIA
Sbjct: 419  EAKKKLYSENGRHPDNEEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGINQSLKASEVIA 478

Query: 586  DPEALTSEEILIKQIVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSR 407
            DP A TSE+IL+KQ +  DL+KVLD+L  REKQV+RWRFGL DGRMKTLQEIGE MGVSR
Sbjct: 479  DPAAKTSEDILMKQFMREDLNKVLDTLNLREKQVVRWRFGLDDGRMKTLQEIGELMGVSR 538

Query: 406  ERIRQIESCAFXXXXXXXXXXXXRQHLIT 320
            ERIRQIESCAF            RQ++I+
Sbjct: 539  ERIRQIESCAFRKLKSKKRTKNLRQYIIS 567


>ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-like [Elaeis guineensis]
          Length = 555

 Score =  517 bits (1332), Expect = e-143
 Identities = 309/553 (55%), Positives = 346/553 (62%), Gaps = 18/553 (3%)
 Frame = -1

Query: 1978 MASLVPPFYGPSL-----------HQTPQAKTRCPVNFRAQCISSQMTAVIDFEKTQIPT 1832
            MA LVP F  PS+           H +  +K R  V FR+QC+S+   AVID E   I +
Sbjct: 1    MACLVPQFKCPSMSSDAHFRSLSHHPSLNSKARDSVCFRSQCVSTPTAAVIDME--HILS 58

Query: 1831 LEAYSTS-------RYIGAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1673
            LEA STS        Y+GAIG  TKT+                                 
Sbjct: 59   LEARSTSLAATRPLTYVGAIGPPTKTNMEATLATEALLTGEEAIIAAAAAEAVALARTAV 118

Query: 1672 XXXXXXAQMKGKDLSAKLDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEG 1493
                  A     D S KL++S +F SEADI+ LER              S   +TKP E 
Sbjct: 119  EAAKDAALTIANDPSVKLEKSLDFSSEADILQLER--------------STATDTKPHEE 164

Query: 1492 HITPNPSKDEGISSLLHNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVX 1313
            H+  +PS+D  IS+L+HN+LE  KM  S  +                         + V 
Sbjct: 165  HLAKDPSQDVDISNLIHNELEPQKMHYSGSIAVRSGRQTERIARRARAAERAASSVIPVK 224

Query: 1312 XXXXXXXKRTAVPEIDYSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXX 1133
                   KR+A  EIDYSDPLRYLRGTT+T             EG               
Sbjct: 225  SGSSSKKKRSAFQEIDYSDPLRYLRGTTSTSKLLTAAEELELSEGIQDLLKLERLREELE 284

Query: 1132 XRNGSPPTFAQWATAAGVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQ 953
             RNG+ PT AQWA AAGVD RTLRKRLNYG +CKDKMI SNIRLVISIAKN+QGAGMNLQ
Sbjct: 285  ERNGAQPTLAQWAAAAGVDQRTLRKRLNYGTFCKDKMITSNIRLVISIAKNYQGAGMNLQ 344

Query: 952  DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYR 773
            DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLS+QSRTIRLP HMVEATYR
Sbjct: 345  DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPFHMVEATYR 404

Query: 772  VREARKQLYSENGRYPHNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEV 593
            VR+A KQLY+ENGR+P  EEIAEA GL+MKR  AVML PKAPRSLDQKIGINQSLKPSEV
Sbjct: 405  VRQAEKQLYNENGRHPDYEEIAEATGLSMKRLNAVMLIPKAPRSLDQKIGINQSLKPSEV 464

Query: 592  IADPEALTSEEILIKQIVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGV 413
            IADP+A TSEEILIKQ + +DL+KVL+SL PREKQVIRWRFGL DG  KTLQEIGE MGV
Sbjct: 465  IADPKAETSEEILIKQFMKQDLNKVLNSLNPREKQVIRWRFGLEDGMTKTLQEIGELMGV 524

Query: 412  SRERIRQIESCAF 374
            SRERIRQIES AF
Sbjct: 525  SRERIRQIESNAF 537


>ref|XP_011623893.1| PREDICTED: RNA polymerase sigma factor sigB [Amborella trichopoda]
          Length = 563

 Score =  499 bits (1285), Expect = e-138
 Identities = 284/565 (50%), Positives = 350/565 (61%), Gaps = 12/565 (2%)
 Frame = -1

Query: 1978 MASLVPPFYGPSLHQTPQAKTRCPVNFRAQCISSQMTAVIDFEKTQIPTLEAYSTS---- 1811
            MA ++P F           +TR    F+ QC+SS  T V+D +K ++P+L  +STS    
Sbjct: 1    MACMLPQFIHIRTSYHNNLRTREATCFQTQCVSSTATVVVDVDKVRVPSLGGHSTSVSTH 60

Query: 1810 ---RYIGAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKG 1640
                Y+G IG   KTDF                                      A M G
Sbjct: 61   GPLTYVGTIGSQKKTDFEAALVTESLLKSEEAIIAAAAAEAIALAKAAAKLAKDAALMVG 120

Query: 1639 KDLSAKLDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGH-----ITPNP 1475
                ++ D+ ++FPSEADI+ L+R RLTEME +   + S+I    P++ H     ++PN 
Sbjct: 121  SVPPSRSDKVDDFPSEADILRLQRARLTEMERIGSMDGSSIAGIGPRDKHKSVNQLSPNE 180

Query: 1474 SKDEGISSLLHNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXX 1295
              D+       N LE  ++Q S+ +                         + V       
Sbjct: 181  MADK---QSRENILEALQLQHSQRVAVRSRRQTERRARRAKGVEKAAANAITVKLGTTSR 237

Query: 1294 XKRTAVPEIDYSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNGSP 1115
             KR  + EIDYSDPLRYLRGTTN+             EG                R G  
Sbjct: 238  RKRAPLQEIDYSDPLRYLRGTTNSTKLLTATEELELSEGIQDLLKLEKLHKELTERFGGE 297

Query: 1114 PTFAQWATAAGVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEG 935
            PTF QWA AAG+D + LR+RL+YG +CKDKMIKSNIRLVISIAKN+QG G+++QDLVQEG
Sbjct: 298  PTFVQWAAAAGIDQKALRRRLSYGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEG 357

Query: 934  CRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREARK 755
            CRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLP HMV+ATYRVREA K
Sbjct: 358  CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVDATYRVREATK 417

Query: 754  QLYSENGRYPHNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEA 575
            QLYSENGR+P++EE+AEA GL+MKR T V+LTPKAPRSLDQKIGINQ+LKPSEVI+DPEA
Sbjct: 418  QLYSENGRHPNDEEVAEATGLSMKRLTTVLLTPKAPRSLDQKIGINQNLKPSEVISDPEA 477

Query: 574  LTSEEILIKQIVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRERIR 395
             T+E++L+KQ + +DL KVL++L PREKQV+RWRFGL DGRMKTLQEIGE MGVSRERIR
Sbjct: 478  ETAEDLLMKQFMKQDLEKVLNTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIR 537

Query: 394  QIESCAFXXXXXXXXXXXXRQHLIT 320
            QIES AF            RQ+L++
Sbjct: 538  QIESSAFRKLKNKKRTKNLRQYLLS 562


>gb|ERM94758.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  496 bits (1277), Expect = e-137
 Identities = 280/546 (51%), Positives = 344/546 (63%), Gaps = 12/546 (2%)
 Frame = -1

Query: 1921 KTRCPVNFRAQCISSQMTAVIDFEKTQIPTLEAYSTS-------RYIGAIGRLTKTDFXX 1763
            +TR    F+ QC+SS  T V+D +K ++P+L  +STS        Y+G IG   KTDF  
Sbjct: 27   RTREATCFQTQCVSSTATVVVDVDKVRVPSLGGHSTSVSTHGPLTYVGTIGSQKKTDFEA 86

Query: 1762 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGKDLSAKLDRSENFPSEADI 1583
                                                A M G    ++ D+ ++FPSEADI
Sbjct: 87   ALVTESLLKSEEAIIAAAAAEAIALAKAAAKLAKDAALMVGSVPPSRSDKVDDFPSEADI 146

Query: 1582 ILLERVRLTEMESLKRSNNSAIPETKPQEGH-----ITPNPSKDEGISSLLHNKLELPKM 1418
            + L+R RLTEME +   + S+I    P++ H     ++PN   D+       N LE  ++
Sbjct: 147  LRLQRARLTEMERIGSMDGSSIAGIGPRDKHKSVNQLSPNEMADK---QSRENILEALQL 203

Query: 1417 QDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXKRTAVPEIDYSDPLRYLR 1238
            Q S+ +                         + V        KR  + EIDYSDPLRYLR
Sbjct: 204  QHSQRVAVRSRRQTERRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYSDPLRYLR 263

Query: 1237 GTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNGSPPTFAQWATAAGVDPRTLRK 1058
            GTTN+             EG                R G  PTF QWA AAG+D + LR+
Sbjct: 264  GTTNSTKLLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALRR 323

Query: 1057 RLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKF 878
            RL+YG +CKDKMIKSNIRLVISIAKN+QG G+++QDLVQEGCRGLV+GAEKFDASKGFKF
Sbjct: 324  RLSYGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFKF 383

Query: 877  STYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREARKQLYSENGRYPHNEEIAEAA 698
            STYAHWWIKQAVR+SLSDQSRTIRLP HMV+ATYRVREA KQLYSENGR+P++EE+AEA 
Sbjct: 384  STYAHWWIKQAVRKSLSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEAT 443

Query: 697  GLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTSEEILIKQIVMRDLHKV 518
            GL+MKR T V+LTPKAPRSLDQKIGINQ+LKPSEVI+DPEA T+E++L+KQ + +DL KV
Sbjct: 444  GLSMKRLTTVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLMKQFMKQDLEKV 503

Query: 517  LDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRERIRQIESCAFXXXXXXXXXXXX 338
            L++L PREKQV+RWRFGL DGRMKTLQEIGE MGVSRERIRQIES AF            
Sbjct: 504  LNTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKNL 563

Query: 337  RQHLIT 320
            RQ+L++
Sbjct: 564  RQYLLS 569


>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
          Length = 572

 Score =  494 bits (1271), Expect = e-136
 Identities = 294/549 (53%), Positives = 343/549 (62%), Gaps = 13/549 (2%)
 Frame = -1

Query: 1927 QAKTRCPVNFRAQCISSQMTA-----VIDFEKTQIPTLEAYSTS-------RYIGAIGRL 1784
            Q K R  + FR QCI S  TA     V+D EK ++P+LEA+  S        YIGAI   
Sbjct: 33   QLKARDLLCFRTQCILSTTTATMTTTVVDDEKLRMPSLEAHLISVPADRPLTYIGAIDPP 92

Query: 1783 TKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGKDLSAKLDR-SE 1607
            TK  F                                      A M   + S+K D+   
Sbjct: 93   TKAKFEATLATEPLITGDEALIAAAAVEAVALAKAAVEIAKDAALMVSTNPSSKSDKWPP 152

Query: 1606 NFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHITPNPSKDEGISSLLHNKLEL 1427
            + PSE D    E  +L E+E +   ++S   E++P+E     +P+ +E         L+L
Sbjct: 153  DIPSELDTYWHETAQLNEIEQVDMVHHSLGAESRPKEDSDYLDPTDEE---------LKL 203

Query: 1426 PKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXKRTAVPEIDYSDPLR 1247
             +MQ SK +                         V V        KR+A+ ++DYSDPLR
Sbjct: 204  LQMQLSKSIAVRSGRQTERRARRARAAEKVAANVVAVKSGSSSRKKRSALQDVDYSDPLR 263

Query: 1246 YLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNGSPPTFAQWATAAGVDPRT 1067
            YLRGTT+T             EG                R G  PTFAQWA AAG+D +T
Sbjct: 264  YLRGTTSTSRLLTATEELEFSEGIQDLLKLEKLYEELAERYGGQPTFAQWAAAAGIDQKT 323

Query: 1066 LRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKG 887
            LRKRLNYG  CKDKMIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGLV+GAEKFDASKG
Sbjct: 324  LRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKG 383

Query: 886  FKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREARKQLYSENGRYPHNEEIA 707
            FKFSTYAHWWIKQAVR+SLSDQSRTIRLP HMVEATYRVREARKQLYSENGR+P NEE+A
Sbjct: 384  FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRHPDNEEVA 443

Query: 706  EAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTSEEILIKQIVMRDL 527
            EA GL+MKR TAV+LTPKAPRSLDQKIGINQ+LKPSEVIADP+A T+EE+L+K+ + +DL
Sbjct: 444  EATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETTEELLMKKFMKQDL 503

Query: 526  HKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRERIRQIESCAFXXXXXXXXX 347
             KVLDSL PREKQVIRWRFGL DGRMKTLQEIGE MGVSRERIRQIESCAF         
Sbjct: 504  EKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRT 563

Query: 346  XXXRQHLIT 320
               +Q+LI+
Sbjct: 564  KNLQQYLIS 572


>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
            nucifera]
          Length = 584

 Score =  486 bits (1250), Expect = e-134
 Identities = 280/530 (52%), Positives = 334/530 (63%), Gaps = 13/530 (2%)
 Frame = -1

Query: 1924 AKTRCPVNFRAQCISS-----QMTAVIDFEKTQIPTLEAYSTS-------RYIGAIGRLT 1781
            +K+R  ++F+ QC+ S       T ++D EK ++P+LE++S S        YIGA G  T
Sbjct: 37   SKSRDLLSFQTQCVLSTTTTAMTTTLVDVEKLRMPSLESHSISVASDRPLSYIGATGPPT 96

Query: 1780 KTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGKDLSAKLDRS-EN 1604
            K  F                                      A M     S++ +    +
Sbjct: 97   KASFEATLAMESLITGDEALIAAAAAEAVALAKEAVEVAKDAALMVNDKSSSESENGPSD 156

Query: 1603 FPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHITPNPSKDEGISSLLHNKLELP 1424
            F SE+ I  LE+ +LTE + + R ++S   E++ +E       +KD         + +L 
Sbjct: 157  FSSESHIFRLEKAQLTETQEVGRIDHSVGLESRQEEEQSVQFSNKDSDGLDSSDEEFKLL 216

Query: 1423 KMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXKRTAVPEIDYSDPLRY 1244
            +MQ  K +                         + V        +R A+ +IDYSDPLRY
Sbjct: 217  QMQLLKSIAVRSGRQTERQARRARAMEKASTNVLSVKSGHSSRKRRAALQDIDYSDPLRY 276

Query: 1243 LRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNGSPPTFAQWATAAGVDPRTL 1064
            LRGTT+T             EG                R G  PTFAQWA AAGVD +TL
Sbjct: 277  LRGTTSTSRLLTATEELELSEGIQDLLKLEKLHEELAERCGGQPTFAQWAAAAGVDQKTL 336

Query: 1063 RKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGF 884
            RKRLNYG  CKDKMIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGLVKGAEKFDASKGF
Sbjct: 337  RKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGF 396

Query: 883  KFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREARKQLYSENGRYPHNEEIAE 704
            KFSTYAHWWIKQAVR+SLSDQSRTIRLP HMVEATYRVREA+KQLYSENGR+P NEE+AE
Sbjct: 397  KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSENGRHPDNEEVAE 456

Query: 703  AAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTSEEILIKQIVMRDLH 524
            A GL+MKR TAV+LTPKAP SLDQKIG+NQ +KPSE+IADP+A T+EE+LIKQ + +DL 
Sbjct: 457  ATGLSMKRLTAVLLTPKAPISLDQKIGMNQDMKPSEIIADPDAETAEELLIKQFMKQDLE 516

Query: 523  KVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRERIRQIESCAF 374
            KVLDSL PREKQVIRWRFG+ DGRMKTLQEIGE MGVSRERIRQIESCAF
Sbjct: 517  KVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAF 566


>ref|XP_009409922.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
            subsp. malaccensis]
          Length = 560

 Score =  483 bits (1242), Expect = e-133
 Identities = 293/567 (51%), Positives = 352/567 (62%), Gaps = 14/567 (2%)
 Frame = -1

Query: 1978 MASLVPPF---------YGPSLHQTPQAKTRCPVNFRAQCISSQMTAVIDFEKTQIPTLE 1826
            MA L P F         + PSL+     + R  V+ R+QCI S  TAVI+ E  QIPTLE
Sbjct: 1    MACLAPQFKWPPSSDAHFRPSLNSI-HPRARDSVSSRSQCIISPATAVIEIE--QIPTLE 57

Query: 1825 AYSTS-----RYIGAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1661
            A+ST      +Y  A+G   K                                       
Sbjct: 58   AHSTDAIRPLKYTAAVGPPKKASTIATLTPETLLTDEESLIAAAAAEAVALARAAVEIAR 117

Query: 1660 XXAQMKGKDLSAKLDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHITP 1481
              AQ   K+   + D+  +F SEA++  LERVR TE ES+K  + S I E   +    T 
Sbjct: 118  DAAQKIRKNPFTESDKLNHFTSEANMHRLERVRFTETESIKVMS-SLIAEVHQENS--TE 174

Query: 1480 NPSKDEGISSLLHNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXX 1301
            NPS+ + + +L+H+++E+ +M  SK +                         + V     
Sbjct: 175  NPSEID-VFNLMHSEIEIKEMCHSKGIAVRSGRQTERRAKRARAAKKDASGVINVKRGTS 233

Query: 1300 XXXKRTAVPEIDYSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNG 1121
               KR++  E+DYSDPLRYLRGTT+T             +G                RNG
Sbjct: 234  GKKKRSSFQEVDYSDPLRYLRGTTSTSKLLSAVEELELSKGIQDLLKLERLREELVGRNG 293

Query: 1120 SPPTFAQWATAAGVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQ 941
              PTFAQWATAAG+D +TLRKRLN G +CKDKMIKSNIRLVISIAKN+Q AG++LQDLVQ
Sbjct: 294  GQPTFAQWATAAGIDQKTLRKRLNDGTFCKDKMIKSNIRLVISIAKNYQNAGLSLQDLVQ 353

Query: 940  EGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREA 761
            EG RGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLS+QSRTIRLP HMVEATYRVREA
Sbjct: 354  EGYRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPFHMVEATYRVREA 413

Query: 760  RKQLYSENGRYPHNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADP 581
            +KQLYSENGR+P   E+A A GL+MKR   V+LTPKAPRSLDQKIGINQ+LKPSEV+ADP
Sbjct: 414  KKQLYSENGRHPDYVEVAVATGLSMKRVETVLLTPKAPRSLDQKIGINQNLKPSEVMADP 473

Query: 580  EALTSEEILIKQIVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRER 401
            EA TSEEILIK+ +  DL+KVLD+L PREKQV+RWRFGL + R+KTLQEIG+ MGVSRER
Sbjct: 474  EAETSEEILIKKFMKADLNKVLDTLNPREKQVLRWRFGLDNERIKTLQEIGKLMGVSRER 533

Query: 400  IRQIESCAFXXXXXXXXXXXXRQHLIT 320
            IRQIESCAF            RQ+LI+
Sbjct: 534  IRQIESCAFRKLKSKKKMRNLRQYLIS 560


>ref|XP_009408073.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
            subsp. malaccensis]
          Length = 553

 Score =  482 bits (1240), Expect = e-133
 Identities = 293/574 (51%), Positives = 343/574 (59%), Gaps = 21/574 (3%)
 Frame = -1

Query: 1978 MASLVPPFYGP------------SLHQTPQAKTRCPVNFRAQCISSQMTAVIDFEKTQIP 1835
            MA LVP F  P            SLH     K R  V  + +C+ S  TA+IDFE  QIP
Sbjct: 1    MACLVPQFKPPPTSDAHSRLSLPSLHP----KARESVWSQVRCVLSPKTALIDFE--QIP 54

Query: 1834 TLEAYSTS---------RYIGAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1682
             LEA STS          Y GA+G  TKT F                             
Sbjct: 55   KLEARSTSLSTCAIKPLTYTGAVGLPTKTSFEATWASEALLTNEEAVIAAAAAEAVALAR 114

Query: 1681 XXXXXXXXXAQMKGKDLSAKLDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKP 1502
                     AQM  K  SA++               E V L++ E    +N+S   ET  
Sbjct: 115  AALELAKDAAQMIRKSPSAEV---------------ENVNLSKTEWTGMTNHSVATETTS 159

Query: 1501 QEGHITPNPSKDEGISSLLHNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXV 1322
             E  +T + S  + ISS  +N+ E+ + +    +                         +
Sbjct: 160  LEDSVTLDESVRKDISSSTYNETEVEETEYCGNIAVRSGRQTERRARRARAAEKAAAGVL 219

Query: 1321 LVXXXXXXXXKRTAVPEIDYSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXX 1142
             +        KR+ + EIDYSDPL YLRGTT+T             EG            
Sbjct: 220  NLKSGSSGKKKRSTLQEIDYSDPLHYLRGTTSTSRLLTAAEEVELSEGIQDLLKLERLQQ 279

Query: 1141 XXXXRNGSPPTFAQWATAAGVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGM 962
                RNG  PTFAQWA AAG+D + LRKRLNYG +CKDKMI SNIRLVISIAKN+Q AGM
Sbjct: 280  DLTERNGCQPTFAQWAAAAGIDQKVLRKRLNYGTFCKDKMITSNIRLVISIAKNYQHAGM 339

Query: 961  NLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEA 782
            NLQDLVQEGCRGL+KGAEKFDASKGFKFSTYAHWWIKQAVR+SLS+QSRTIRLP HMVEA
Sbjct: 340  NLQDLVQEGCRGLIKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEA 399

Query: 781  TYRVREARKQLYSENGRYPHNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKP 602
            TYRVREA+KQLYSENGR+P +EE+AEA+GL+MKRF AVMLTPKAPRSLDQKIGINQ+LKP
Sbjct: 400  TYRVREAKKQLYSENGRHPDHEEVAEASGLSMKRFAAVMLTPKAPRSLDQKIGINQTLKP 459

Query: 601  SEVIADPEALTSEEILIKQIVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGES 422
            SEVIADP+A TSE+ILIKQ +  DL+KVLD+L PREK+V+RWRFGL DGRMKTLQEIGE 
Sbjct: 460  SEVIADPDAETSEDILIKQFMREDLNKVLDTLNPREKRVVRWRFGLEDGRMKTLQEIGEL 519

Query: 421  MGVSRERIRQIESCAFXXXXXXXXXXXXRQHLIT 320
            MGVSRERIRQIE CAF            +Q++I+
Sbjct: 520  MGVSRERIRQIEFCAFRKLKSKKRTKNLQQYIIS 553


>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
            gi|296090195|emb|CBI40014.3| unnamed protein product
            [Vitis vinifera]
          Length = 575

 Score =  480 bits (1236), Expect = e-132
 Identities = 284/559 (50%), Positives = 343/559 (61%), Gaps = 16/559 (2%)
 Frame = -1

Query: 1948 PSLHQTPQAKTRCPVNFRAQC--------ISSQMTAVIDFEKTQIPTLEAYSTS------ 1811
            P LH    +K R  + FR QC        +S+  TAV+D EK ++P+LE++S S      
Sbjct: 19   PKLHIL--SKNREAIYFRVQCALSTTSPPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRP 76

Query: 1810 -RYIGAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGKD 1634
              YIG +G  T+ +F                                      A++ GK+
Sbjct: 77   WTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKN 136

Query: 1633 LSAKLD-RSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHITPNPSKDEGI 1457
             SAK + +  +F S  D     R++ TE E +    +S   ET   + +   + ++D   
Sbjct: 137  NSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDD 196

Query: 1456 SSLLHNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXKRTAV 1277
                  +LEL + + SK +                         V V        KR ++
Sbjct: 197  LEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSL 256

Query: 1276 PEIDYSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNGSPPTFAQW 1097
             E+DYSDPLRYLRGTT+T             EG                R G  PTFAQW
Sbjct: 257  QEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQW 316

Query: 1096 ATAAGVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVK 917
            A AAGVD +TLR+R NYG  CKDKMIKSNIRLVISIAKN+QGAGMN+QDLVQEGCRGLV+
Sbjct: 317  AAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVR 376

Query: 916  GAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREARKQLYSEN 737
            GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLP HMVEATYRV+EARKQLYSEN
Sbjct: 377  GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSEN 436

Query: 736  GRYPHNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTSEEI 557
            GR+P+NEE+AEA GL+MKR  AV+LTPKAPRSLDQKIGINQ+LKPSEVIADP+A T+EE+
Sbjct: 437  GRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEEL 496

Query: 556  LIKQIVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRERIRQIESCA 377
            LIKQ +  DL KVL+SL PREKQVIRWR+GL DGR KTLQEIGE MGVSRERIRQIESCA
Sbjct: 497  LIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCA 556

Query: 376  FXXXXXXXXXXXXRQHLIT 320
            F            +Q+L++
Sbjct: 557  FRKLKNKRRTKHLQQYLVS 575


>ref|XP_008775892.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase sigma factor sigB-like
            [Phoenix dactylifera]
          Length = 495

 Score =  472 bits (1214), Expect = e-130
 Identities = 262/421 (62%), Positives = 290/421 (68%)
 Frame = -1

Query: 1636 DLSAKLDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHITPNPSKDEGI 1457
            D S KL++SE+F SEA+I+ LER              S   +TKP E H   +P +D  I
Sbjct: 71   DPSVKLEKSEDFSSEAEILWLER--------------STASDTKPHEEHPAKDPYQDVDI 116

Query: 1456 SSLLHNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXKRTAV 1277
            S+L HN+LE PKMQ S+ +                         + V        K +A 
Sbjct: 117  SNLTHNELEPPKMQYSESIAVRSGRRTERKARRARAAEKAASSVIPVKSGSSSKKKCSAF 176

Query: 1276 PEIDYSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNGSPPTFAQW 1097
             EIDYSDPLRYLRGTT T             +G                RNG  PTFAQW
Sbjct: 177  QEIDYSDPLRYLRGTTGTSKLLTAAEELELSDGIQDLLKLERLREELAERNGDQPTFAQW 236

Query: 1096 ATAAGVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVK 917
            A  AGVD RTLRKR ++G +CKDKMIKSNIRLV+SIAKN Q AGMNLQDLVQEGCRGLVK
Sbjct: 237  AAPAGVDQRTLRKRXSFGTFCKDKMIKSNIRLVMSIAKNXQDAGMNLQDLVQEGCRGLVK 296

Query: 916  GAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREARKQLYSEN 737
            GA KFDASK FKFSTYAHWWIKQA+RR LS+QSRTIRLP+HMVEATYRVREA KQLYSEN
Sbjct: 297  GAVKFDASKRFKFSTYAHWWIKQAIRRCLSEQSRTIRLPLHMVEATYRVREAEKQLYSEN 356

Query: 736  GRYPHNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTSEEI 557
            GR+P  EE+AEA GL+ KR  AVMLTPKAPRSLDQKIGINQSLKPSEVIADPEA TSEEI
Sbjct: 357  GRHPDYEEVAEATGLSTKRLNAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEAETSEEI 416

Query: 556  LIKQIVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRERIRQIESCA 377
            LIKQ   +DL+KVLD+L PREKQVIRWRFGL DG  K LQEIGE MGVSRERIRQIES  
Sbjct: 417  LIKQFRKQDLNKVLDTLNPREKQVIRWRFGLEDGMQKMLQEIGELMGVSRERIRQIESNV 476

Query: 376  F 374
            F
Sbjct: 477  F 477


>ref|XP_010251516.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Nelumbo
            nucifera]
          Length = 479

 Score =  471 bits (1212), Expect = e-129
 Identities = 256/422 (60%), Positives = 295/422 (69%)
 Frame = -1

Query: 1639 KDLSAKLDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHITPNPSKDEG 1460
            K  S   +   +F SE+ I  LE+ +LTE + + R ++S   E++ +E       +KD  
Sbjct: 40   KSSSESENGPSDFSSESHIFRLEKAQLTETQEVGRIDHSVGLESRQEEEQSVQFSNKDSD 99

Query: 1459 ISSLLHNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXKRTA 1280
                   + +L +MQ  K +                         + V        +R A
Sbjct: 100  GLDSSDEEFKLLQMQLLKSIAVRSGRQTERQARRARAMEKASTNVLSVKSGHSSRKRRAA 159

Query: 1279 VPEIDYSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNGSPPTFAQ 1100
            + +IDYSDPLRYLRGTT+T             EG                R G  PTFAQ
Sbjct: 160  LQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLHEELAERCGGQPTFAQ 219

Query: 1099 WATAAGVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLV 920
            WA AAGVD +TLRKRLNYG  CKDKMIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGLV
Sbjct: 220  WAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 279

Query: 919  KGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREARKQLYSE 740
            KGAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLP HMVEATYRVREA+KQLYSE
Sbjct: 280  KGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSE 339

Query: 739  NGRYPHNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTSEE 560
            NGR+P NEE+AEA GL+MKR TAV+LTPKAP SLDQKIG+NQ +KPSE+IADP+A T+EE
Sbjct: 340  NGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLDQKIGMNQDMKPSEIIADPDAETAEE 399

Query: 559  ILIKQIVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRERIRQIESC 380
            +LIKQ + +DL KVLDSL PREKQVIRWRFG+ DGRMKTLQEIGE MGVSRERIRQIESC
Sbjct: 400  LLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESC 459

Query: 379  AF 374
            AF
Sbjct: 460  AF 461


>gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
          Length = 605

 Score =  471 bits (1211), Expect = e-129
 Identities = 275/555 (49%), Positives = 328/555 (59%), Gaps = 15/555 (2%)
 Frame = -1

Query: 1939 HQTPQAKTRCPVNFRAQCI--------SSQMTAVIDFEKTQIPTLEAYSTS-------RY 1805
            H +  +K++ P+ FR  C+        S+ MT V+D EK ++P+LEA+S +        Y
Sbjct: 51   HSSHPSKSKEPICFRTHCVLSTTSPSTSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTY 110

Query: 1804 IGAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGKDLSA 1625
             GA+G  T+ +                                         +   + SA
Sbjct: 111  FGAVGPSTEENLGTSLATETLTSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHN-SA 169

Query: 1624 KLDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHITPNPSKDEGISSLL 1445
            K        S AD       +LTE E      +S I E  P+E +    P          
Sbjct: 170  KPKSKPAISSSADTNTSMWAQLTERERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPT 229

Query: 1444 HNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXKRTAVPEID 1265
            H +L+L + Q S+ +                         + V        KR +V E+D
Sbjct: 230  HEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVD 289

Query: 1264 YSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNGSPPTFAQWATAA 1085
            YSDPLRYLR TT++              G                R G  PTFAQWA AA
Sbjct: 290  YSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAA 349

Query: 1084 GVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEK 905
            GVD R LR+RLNYG  CKDKMI SNIRLVISIAKN+QGAGMNLQDLVQEGCRGLV+GAEK
Sbjct: 350  GVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 409

Query: 904  FDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREARKQLYSENGRYP 725
            FDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLP HMVEATYRV+EARKQLYSENGR+P
Sbjct: 410  FDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHP 469

Query: 724  HNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTSEEILIKQ 545
            +NEE+AEA GL+MKR  AV+L+PKAPRSLDQKIGINQ+LKPSEVIADPEA T+E++LIK+
Sbjct: 470  NNEEVAEATGLSMKRLHAVLLSPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKK 529

Query: 544  IVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRERIRQIESCAFXXX 365
             +  DL KVLD+L PRE+QV+RWRFGL DGRMKTLQEIGE MGVSRERIRQIES AF   
Sbjct: 530  FMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKL 589

Query: 364  XXXXXXXXXRQHLIT 320
                      Q+ IT
Sbjct: 590  KNKKRTKHLMQYAIT 604


>gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 578

 Score =  470 bits (1210), Expect = e-129
 Identities = 277/554 (50%), Positives = 332/554 (59%), Gaps = 14/554 (2%)
 Frame = -1

Query: 1939 HQTPQAKTRCPVNFRAQCI-------SSQMTAVIDFEKTQIPTLEAYSTS-------RYI 1802
            H +  +K +  + FR+QC+       S+  TAV+D EK ++P+ EA+S S        Y 
Sbjct: 22   HHSHHSKHKESICFRSQCVLSTTSSTSTATTAVLDVEKLRLPSFEAHSNSVVTDRPWTYT 81

Query: 1801 GAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGKDLSAK 1622
            GA G  ++  F                                      A M     SAK
Sbjct: 82   GATGPPSEASFGATLATENLLTSDEAVIAAAAAEAVALARAAAKVAKDAAIMVKNHSSAK 141

Query: 1621 LDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHITPNPSKDEGISSLLH 1442
             +      S  D +  +    TE E      +    E + +E     N +K+       +
Sbjct: 142  TEMKSPGSSATDTLTSKWGLFTEAERAGIVGDYVSDELEMEEDDFEQNSTKESDELEPTN 201

Query: 1441 NKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXKRTAVPEIDY 1262
             +L+L + Q S+ +                         V V        +R A+ +IDY
Sbjct: 202  EELKLLEEQLSRSIAVRSNRQPERKAKRTRAAEKAATNVVSVKSGSTNRKRRGALQDIDY 261

Query: 1261 SDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNGSPPTFAQWATAAG 1082
            SDPLRYLRGTTNT             EG                R G PPTFAQWA AA 
Sbjct: 262  SDPLRYLRGTTNTSKLLTANEELELSEGIQDLLKLEVLHEELAERCGRPPTFAQWAAAAE 321

Query: 1081 VDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKF 902
            VD +TLR+RLNYG  CKDKMIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGL++GAEKF
Sbjct: 322  VDRKTLRERLNYGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLIRGAEKF 381

Query: 901  DASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREARKQLYSENGRYPH 722
            DASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLP HMVEATYRV+EARKQLYSENGR P 
Sbjct: 382  DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPD 441

Query: 721  NEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTSEEILIKQI 542
            N E+AEA GL+MKR TAV+L PKAPRSLDQKIGINQ+LKPSEVIADPEA ++E+IL+KQ 
Sbjct: 442  NIEVAEATGLSMKRLTAVLLAPKAPRSLDQKIGINQNLKPSEVIADPEADSAEDILLKQF 501

Query: 541  VMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRERIRQIESCAFXXXX 362
            + +DL KVLDSL+PRE+QVIRWRFG+ DGRMKTLQEIGESMGVSRERIRQIE CAF    
Sbjct: 502  MKKDLEKVLDSLSPRERQVIRWRFGMEDGRMKTLQEIGESMGVSRERIRQIELCAFRKLK 561

Query: 361  XXXXXXXXRQHLIT 320
                    +Q+L++
Sbjct: 562  NKRRTKHLQQYLLS 575


>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
            grandis]
          Length = 601

 Score =  469 bits (1206), Expect = e-129
 Identities = 277/550 (50%), Positives = 323/550 (58%), Gaps = 24/550 (4%)
 Frame = -1

Query: 1951 GPSLHQTPQAKTRC-------PVNFRAQCI---------SSQMTAVI-DFEKTQIPTLEA 1823
            G  LH    A+  C          FRAQC+         SS  TAV+ D EK ++P+LE 
Sbjct: 34   GHLLHSVQDARPNCFAEKNRETTYFRAQCLLSATSPSTLSSAATAVVLDMEKLRLPSLEV 93

Query: 1822 YSTS-------RYIGAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1664
             + S        Y GA+G   + +                                    
Sbjct: 94   LTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAASEAVTLAKAALKSA 153

Query: 1663 XXXAQMKGKDLSAKLDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHIT 1484
               A M   + S+ +D      S     L +   L E+E          PE   +EG++ 
Sbjct: 154  KHAALMIRNESSSNIDNKLELSSRTSTSLSKHAELLELEHSNILTELMEPEGGLREGNVM 213

Query: 1483 PNPSKDEGISSLLHNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXX 1304
               +         H +L+L ++Q  K +                         V V    
Sbjct: 214  QYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAAANVVSVKSGS 273

Query: 1303 XXXXKRTAVPEIDYSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRN 1124
                KR A+ E+DYSDPLRYLRGTT++             EG                R 
Sbjct: 274  LSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERC 333

Query: 1123 GSPPTFAQWATAAGVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLV 944
            G  P FAQWA AAGVD +TLRKRLNYG+ CKDKMIKSNIRLVISIAKN+QGAGMNLQDLV
Sbjct: 334  GGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLV 393

Query: 943  QEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVRE 764
            QEGCRGLV+G EKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLP HMVEATYRV+E
Sbjct: 394  QEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKE 453

Query: 763  ARKQLYSENGRYPHNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIAD 584
            ARKQLYSENGR P NEE+AEA GL+MKR  AV++TPKAPRSLDQKIGINQ+LKPSEVIAD
Sbjct: 454  ARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIAD 513

Query: 583  PEALTSEEILIKQIVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRE 404
            P A TSE++L+KQ + +DL KVLD+L PREKQV+RWRFGL DGRMKTLQEIGE MGVSRE
Sbjct: 514  PNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRE 573

Query: 403  RIRQIESCAF 374
            RIRQIESCAF
Sbjct: 574  RIRQIESCAF 583


>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
            grandis] gi|629111779|gb|KCW76739.1| hypothetical protein
            EUGRSUZ_D01094 [Eucalyptus grandis]
          Length = 588

 Score =  468 bits (1205), Expect = e-129
 Identities = 275/538 (51%), Positives = 321/538 (59%), Gaps = 17/538 (3%)
 Frame = -1

Query: 1936 QTPQAKTRCPVNFRAQCI---------SSQMTAVI-DFEKTQIPTLEAYSTS-------R 1808
            +T   K R    FRAQC+         SS  TAV+ D EK ++P+LE  + S        
Sbjct: 33   RTHAQKNRETTYFRAQCLLSATSPSTLSSAATAVVLDMEKLRLPSLEVLTDSPTSNRPWT 92

Query: 1807 YIGAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGKDLS 1628
            Y GA+G   + +                                       A M   + S
Sbjct: 93   YTGAVGPPAEVNLGATLATETLLTSDEAVIAAAASEAVTLAKAALKSAKHAALMIRNESS 152

Query: 1627 AKLDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHITPNPSKDEGISSL 1448
            + +D      S     L +   L E+E          PE   +EG++    +        
Sbjct: 153  SNIDNKLELSSRTSTSLSKHAELLELEHSNILTELMEPEGGLREGNVMQYSTDKSEDLEP 212

Query: 1447 LHNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXKRTAVPEI 1268
             H +L+L ++Q  K +                         V V        KR A+ E+
Sbjct: 213  THEELQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAAANVVSVKSGSLSKKKRAALQEV 272

Query: 1267 DYSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNGSPPTFAQWATA 1088
            DYSDPLRYLRGTT++             EG                R G  P FAQWA A
Sbjct: 273  DYSDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERCGGEPAFAQWAAA 332

Query: 1087 AGVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAE 908
            AGVD +TLRKRLNYG+ CKDKMIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGLV+G E
Sbjct: 333  AGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGCE 392

Query: 907  KFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREARKQLYSENGRY 728
            KFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLP HMVEATYRV+EARKQLYSENGR 
Sbjct: 393  KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQ 452

Query: 727  PHNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTSEEILIK 548
            P NEE+AEA GL+MKR  AV++TPKAPRSLDQKIGINQ+LKPSEVIADP A TSE++L+K
Sbjct: 453  PDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIADPNAETSEDVLLK 512

Query: 547  QIVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRERIRQIESCAF 374
            Q + +DL KVLD+L PREKQV+RWRFGL DGRMKTLQEIGE MGVSRERIRQIESCAF
Sbjct: 513  QFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 570


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  468 bits (1205), Expect = e-129
 Identities = 274/555 (49%), Positives = 326/555 (58%), Gaps = 15/555 (2%)
 Frame = -1

Query: 1939 HQTPQAKTRCPVNFRAQCI--------SSQMTAVIDFEKTQIPTLEAYSTS-------RY 1805
            H +  +K++ P+ FR  C+        S+ MT V+D EK ++P+LEA+S +        Y
Sbjct: 51   HSSHPSKSKEPICFRTHCVLSTTSPSTSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTY 110

Query: 1804 IGAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGKDLSA 1625
             GA+G  T+ +                                         +   + SA
Sbjct: 111  FGAVGPSTEENLGTSLATETLTSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHN-SA 169

Query: 1624 KLDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHITPNPSKDEGISSLL 1445
            K          AD       +LTE E      +S I E  P+E +    P          
Sbjct: 170  KPKSKPAISLSADTNTSMWAQLTERERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPT 229

Query: 1444 HNKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXKRTAVPEID 1265
            H +L+L + Q S+ +                         + V        KR +V E+D
Sbjct: 230  HEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVD 289

Query: 1264 YSDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNGSPPTFAQWATAA 1085
            YSDPLRYLR TT++              G                R G  PTFAQWA AA
Sbjct: 290  YSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAA 349

Query: 1084 GVDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEK 905
            GVD R LR+RLNYG  CKDKMI SNIRLVISIAKN+QGAGMNLQDLVQEGCRGLV+GAEK
Sbjct: 350  GVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 409

Query: 904  FDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREARKQLYSENGRYP 725
            FDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLP HMVEATYRV+EARKQLYSENGR+P
Sbjct: 410  FDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHP 469

Query: 724  HNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTSEEILIKQ 545
            +NEE+AEA GL+MKR  AV+LTPKAPRSLDQK GINQ+LKPSEVIADPEA T+E++LIK+
Sbjct: 470  NNEEVAEATGLSMKRLHAVLLTPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKK 529

Query: 544  IVMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRERIRQIESCAFXXX 365
             +  DL KVLD+L PRE+QV+RWRFGL DGRMKTLQEIGE MGVSRERIRQIES AF   
Sbjct: 530  FMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKL 589

Query: 364  XXXXXXXXXRQHLIT 320
                      Q+ IT
Sbjct: 590  KNKKRTKHLMQYAIT 604


>ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB [Gossypium raimondii]
            gi|763778947|gb|KJB46070.1| hypothetical protein
            B456_007G347300 [Gossypium raimondii]
          Length = 578

 Score =  467 bits (1202), Expect = e-128
 Identities = 275/554 (49%), Positives = 332/554 (59%), Gaps = 14/554 (2%)
 Frame = -1

Query: 1939 HQTPQAKTRCPVNFRAQCI-------SSQMTAVIDFEKTQIPTLEAYSTS-------RYI 1802
            H +  +K +  + FR+QC+       S   TAV+D EK ++P+ EA+S S        Y 
Sbjct: 22   HHSHHSKHKESICFRSQCVLSTTSSTSMATTAVLDVEKLRLPSFEAHSNSVVTDRPWTYT 81

Query: 1801 GAIGRLTKTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGKDLSAK 1622
            GA G  ++  F                                      A M     SAK
Sbjct: 82   GATGPPSEASFGATLATENLLTSDEAVIAAAAAEAVALARAAAKVAKDAAIMVKNHGSAK 141

Query: 1621 LDRSENFPSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHITPNPSKDEGISSLLH 1442
             +      S  D +  +    TE E      +    E + +E H+  N +K+       +
Sbjct: 142  TEMKSPGSSATDTLTSKWGLFTEAERAGIVGDYVSDELELEEDHLEQNSTKESDELEPTN 201

Query: 1441 NKLELPKMQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXKRTAVPEIDY 1262
             +L+L + Q S+ +                         V V        +R A+ +IDY
Sbjct: 202  EELKLLEEQLSRSIAVRSHRQTERKAKRTRAAEKAATNVVSVKSGSTNRKRRGALQDIDY 261

Query: 1261 SDPLRYLRGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNGSPPTFAQWATAAG 1082
            SDPLRYLRGTTNT             EG                R G PPTFAQWA AA 
Sbjct: 262  SDPLRYLRGTTNTSKLLTANEELELSEGIQDLLKLEGLHEELAERCGRPPTFAQWAAAAE 321

Query: 1081 VDPRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKF 902
            VD +TLR+RLNYG  C DKMIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGL++GAEKF
Sbjct: 322  VDRKTLRERLNYGTICMDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLIRGAEKF 381

Query: 901  DASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREARKQLYSENGRYPH 722
            DASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLP HMVEATYRV+EARKQL+SENGR P 
Sbjct: 382  DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGRQPD 441

Query: 721  NEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTSEEILIKQI 542
            N E+AEA GL+MKR TAV+L PKAPRSLDQKIGINQ+LKPSEVIADPEA ++E+IL+KQ 
Sbjct: 442  NIEVAEATGLSMKRLTAVLLAPKAPRSLDQKIGINQNLKPSEVIADPEADSAEDILLKQF 501

Query: 541  VMRDLHKVLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRERIRQIESCAFXXXX 362
            + +DL KVLDSL+PRE+QVIRWRFG+ DGR+KTLQEIGESMGVSRERIRQIE CAF    
Sbjct: 502  MKKDLEKVLDSLSPRERQVIRWRFGMEDGRVKTLQEIGESMGVSRERIRQIELCAFRKLK 561

Query: 361  XXXXXXXXRQHLIT 320
                    +Q+L++
Sbjct: 562  NKRRTKHLQQYLLS 575


>ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB [Jatropha curcas]
            gi|802585247|ref|XP_012070323.1| PREDICTED: RNA
            polymerase sigma factor sigB [Jatropha curcas]
            gi|643732514|gb|KDP39610.1| hypothetical protein
            JCGZ_02630 [Jatropha curcas]
          Length = 577

 Score =  466 bits (1200), Expect = e-128
 Identities = 278/546 (50%), Positives = 332/546 (60%), Gaps = 12/546 (2%)
 Frame = -1

Query: 1924 AKTRCPVNFRAQCI-----SSQMTAVIDFEKTQIPTLEAYSTS-------RYIGAIGRLT 1781
            AK+R PV FRAQCI      S  TAV+D EK ++P+ EA+  S        Y+G+IG   
Sbjct: 33   AKSREPVCFRAQCILSTTSPSTSTAVLDLEKLRLPSFEAHPDSLVANSPWTYVGSIGPPK 92

Query: 1780 KTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGKDLSAKLDRSENF 1601
            +T F                                      A +     S++ +     
Sbjct: 93   ET-FGSTLATETLITGDDAVIAAAAAEAVALARAAAKVAKDAAILVKSFPSSEAESKLEI 151

Query: 1600 PSEADIILLERVRLTEMESLKRSNNSAIPETKPQEGHITPNPSKDEGISSLLHNKLELPK 1421
            PS AD+      + TE +  +   +S   ET  +E H   +P+K+       H +LEL +
Sbjct: 152  PSIADVSS-RWPQFTETDRARIIGDSVTAETGSREEHPMQHPTKESDHLEPTHEELELLQ 210

Query: 1420 MQDSKCLXXXXXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXKRTAVPEIDYSDPLRYL 1241
             Q S+ +                         +          KR  + E+DYSDPLRYL
Sbjct: 211  KQLSEGIAVRSRRQTERKERRTRAAEKAAANVMSWKSGSTSKKKRGPLQEVDYSDPLRYL 270

Query: 1240 RGTTNTXXXXXXXXXXXXXEGXXXXXXXXXXXXXXXXRNGSPPTFAQWATAAGVDPRTLR 1061
            RGTT+T             EG                R G  PTF QWA AAGVD +TLR
Sbjct: 271  RGTTSTSKLLTATEELELSEGIQDLLKLERLHEELAERCGGQPTFQQWAAAAGVDQKTLR 330

Query: 1060 KRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFK 881
             RLNYG  CKD+MIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGLV+GAEKFDASKGFK
Sbjct: 331  TRLNYGISCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK 390

Query: 880  FSTYAHWWIKQAVRRSLSDQSRTIRLPIHMVEATYRVREARKQLYSENGRYPHNEEIAEA 701
            FSTYAHWWIKQAVR+SLSDQSRTIRLP HMVEATYRV+EARKQLYSENGRYP +EE+AEA
Sbjct: 391  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRYPDDEEVAEA 450

Query: 700  AGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTSEEILIKQIVMRDLHK 521
             GL+MKR +AV+LTPKAPRSLDQKIGIN  LKPSE+IADP+A T+E++L+KQ + +DL K
Sbjct: 451  TGLSMKRLSAVLLTPKAPRSLDQKIGINMDLKPSEIIADPDAETAEDLLMKQFMKQDLEK 510

Query: 520  VLDSLTPREKQVIRWRFGLGDGRMKTLQEIGESMGVSRERIRQIESCAFXXXXXXXXXXX 341
            VLDSL+PRE QVIRWRFGL DGR+KTLQEIGE MGVSRERIRQIES AF           
Sbjct: 511  VLDSLSPRENQVIRWRFGLEDGRIKTLQEIGEIMGVSRERIRQIESSAFRKLKKKKRTKQ 570

Query: 340  XRQHLI 323
             +Q+L+
Sbjct: 571  LKQYLV 576