BLASTX nr result
ID: Anemarrhena21_contig00005055
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00005055
(1237 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010921488.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 260 2e-66
ref|XP_010938249.1| PREDICTED: RNA polymerase II-associated prot... 245 4e-62
ref|XP_010938248.1| PREDICTED: RNA polymerase II-associated prot... 245 4e-62
ref|XP_010938247.1| PREDICTED: RNA polymerase II-associated prot... 245 4e-62
ref|XP_008808676.1| PREDICTED: RNA polymerase II-associated prot... 238 9e-60
ref|XP_008808674.1| PREDICTED: RNA polymerase II-associated prot... 238 9e-60
ref|XP_008781119.1| PREDICTED: RNA polymerase II-associated prot... 233 2e-58
ref|XP_008781117.1| PREDICTED: RNA polymerase II-associated prot... 233 2e-58
ref|XP_008781116.1| PREDICTED: RNA polymerase II-associated prot... 233 2e-58
emb|CBI39598.3| unnamed protein product [Vitis vinifera] 213 2e-52
ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated prot... 213 2e-52
ref|XP_011038929.1| PREDICTED: RNA polymerase II-associated prot... 206 3e-50
ref|XP_011038928.1| PREDICTED: RNA polymerase II-associated prot... 206 3e-50
ref|XP_011038927.1| PREDICTED: RNA polymerase II-associated prot... 206 3e-50
ref|XP_011038926.1| PREDICTED: RNA polymerase II-associated prot... 206 3e-50
ref|XP_011038925.1| PREDICTED: RNA polymerase II-associated prot... 206 3e-50
ref|XP_011038924.1| PREDICTED: RNA polymerase II-associated prot... 206 3e-50
ref|XP_011023789.1| PREDICTED: RNA polymerase II-associated prot... 206 3e-50
ref|XP_011023788.1| PREDICTED: RNA polymerase II-associated prot... 206 3e-50
ref|XP_011023786.1| PREDICTED: RNA polymerase II-associated prot... 206 3e-50
>ref|XP_010921488.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II-associated protein
3 [Elaeis guineensis]
Length = 471
Score = 260 bits (664), Expect = 2e-66
Identities = 152/290 (52%), Positives = 194/290 (66%), Gaps = 3/290 (1%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKGVQNV 1058
+EFA RLEPNNQELRKQ++ K GPLK+ QG++ V NSEM K +
Sbjct: 185 SEFATRLEPNNQELRKQHSETKALYEKEISKKIRGPLKNPFQGIQGVSNSEMGTKNARGD 244
Query: 1057 LAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVT--GVDTRK-LVDGSHGSAA 887
+V SNA AA +A + ++ LI V D K T G +TR+ L+DGS AA
Sbjct: 245 HSVLSNAQNAAAAANGTQTKDGEGTCDQPLIAVKDTDSKSTDVGKETREYLLDGSREGAA 304
Query: 886 LTSTERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRAL 707
L+S + K +Q VG K+ L ASM+ +ASRAASRVMATA K+I+ P++AYEFE+SWRAL
Sbjct: 305 LSSN--NAKKDQDVGC-KQVLKASMKDLASRAASRVMATAGKSITTPRTAYEFEVSWRAL 361
Query: 706 SGDSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTKI 527
S D Q LLK+I P TLPQIFKNALS P+LI+IIKCT ELAV+IL+NL K+
Sbjct: 362 SDDCALQMQLLKTIPPPTLPQIFKNALSVPILIDIIKCTTTFFKEDTELAVNILDNLAKV 421
Query: 526 PRFDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFCYGE 377
PRFDMIVMCLS+ D +E+ ++WE VFS+KDI N E LS+LR ++CYG+
Sbjct: 422 PRFDMIVMCLSSTDRSELWQIWEEVFSSKDIAANYIETLSQLRSRYCYGK 471
>ref|XP_010938249.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X3
[Elaeis guineensis]
Length = 351
Score = 245 bits (626), Expect = 4e-62
Identities = 145/301 (48%), Positives = 182/301 (60%), Gaps = 1/301 (0%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKGVQNV 1058
+EFA+RLEPNNQELRKQYT + + KG
Sbjct: 104 SEFAMRLEPNNQELRKQYT----------------------------ETKALYEKG---- 131
Query: 1057 LAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRK-LVDGSHGSAALT 881
S G ++ LI V D K T TR+ L+D S G A +
Sbjct: 132 --------------------SKGKIPDQPLIGVMDTDSKSTEKQTREHLLDESRGGAGQS 171
Query: 880 STERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRALSG 701
S K +QGVG Q +L ASMQ +ASRAASRVMATA K+I+ PK+AYEFE+SWRALS
Sbjct: 172 SHNAITKKDQGVGCQ-HELKASMQDLASRAASRVMATAGKSITAPKTAYEFEVSWRALSD 230
Query: 700 DSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTKIPR 521
D Q LL++I PATLPQIFKNALS+P+L++IIKCT ELAVSIL+NL K+ R
Sbjct: 231 DYALQTQLLRTIPPATLPQIFKNALSSPILMDIIKCTTTFFKEDTELAVSILDNLAKVSR 290
Query: 520 FDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFCYGEWQAHVLGSTGWP 341
FDMIVMCLSA+DH+E+ R+WE VFS++DI N E L++LR ++C+G+WQ + GS GWP
Sbjct: 291 FDMIVMCLSAMDHSELRRIWEEVFSSEDIAANHMETLNQLRSRYCHGDWQDRIHGSNGWP 350
Query: 340 K 338
K
Sbjct: 351 K 351
>ref|XP_010938248.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
[Elaeis guineensis]
Length = 419
Score = 245 bits (626), Expect = 4e-62
Identities = 145/301 (48%), Positives = 182/301 (60%), Gaps = 1/301 (0%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKGVQNV 1058
+EFA+RLEPNNQELRKQYT + + KG
Sbjct: 172 SEFAMRLEPNNQELRKQYT----------------------------ETKALYEKG---- 199
Query: 1057 LAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRK-LVDGSHGSAALT 881
S G ++ LI V D K T TR+ L+D S G A +
Sbjct: 200 --------------------SKGKIPDQPLIGVMDTDSKSTEKQTREHLLDESRGGAGQS 239
Query: 880 STERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRALSG 701
S K +QGVG Q +L ASMQ +ASRAASRVMATA K+I+ PK+AYEFE+SWRALS
Sbjct: 240 SHNAITKKDQGVGCQ-HELKASMQDLASRAASRVMATAGKSITAPKTAYEFEVSWRALSD 298
Query: 700 DSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTKIPR 521
D Q LL++I PATLPQIFKNALS+P+L++IIKCT ELAVSIL+NL K+ R
Sbjct: 299 DYALQTQLLRTIPPATLPQIFKNALSSPILMDIIKCTTTFFKEDTELAVSILDNLAKVSR 358
Query: 520 FDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFCYGEWQAHVLGSTGWP 341
FDMIVMCLSA+DH+E+ R+WE VFS++DI N E L++LR ++C+G+WQ + GS GWP
Sbjct: 359 FDMIVMCLSAMDHSELRRIWEEVFSSEDIAANHMETLNQLRSRYCHGDWQDRIHGSNGWP 418
Query: 340 K 338
K
Sbjct: 419 K 419
>ref|XP_010938247.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
[Elaeis guineensis]
Length = 452
Score = 245 bits (626), Expect = 4e-62
Identities = 145/301 (48%), Positives = 182/301 (60%), Gaps = 1/301 (0%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKGVQNV 1058
+EFA+RLEPNNQELRKQYT + + KG
Sbjct: 205 SEFAMRLEPNNQELRKQYT----------------------------ETKALYEKG---- 232
Query: 1057 LAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRK-LVDGSHGSAALT 881
S G ++ LI V D K T TR+ L+D S G A +
Sbjct: 233 --------------------SKGKIPDQPLIGVMDTDSKSTEKQTREHLLDESRGGAGQS 272
Query: 880 STERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRALSG 701
S K +QGVG Q +L ASMQ +ASRAASRVMATA K+I+ PK+AYEFE+SWRALS
Sbjct: 273 SHNAITKKDQGVGCQ-HELKASMQDLASRAASRVMATAGKSITAPKTAYEFEVSWRALSD 331
Query: 700 DSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTKIPR 521
D Q LL++I PATLPQIFKNALS+P+L++IIKCT ELAVSIL+NL K+ R
Sbjct: 332 DYALQTQLLRTIPPATLPQIFKNALSSPILMDIIKCTTTFFKEDTELAVSILDNLAKVSR 391
Query: 520 FDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFCYGEWQAHVLGSTGWP 341
FDMIVMCLSA+DH+E+ R+WE VFS++DI N E L++LR ++C+G+WQ + GS GWP
Sbjct: 392 FDMIVMCLSAMDHSELRRIWEEVFSSEDIAANHMETLNQLRSRYCHGDWQDRIHGSNGWP 451
Query: 340 K 338
K
Sbjct: 452 K 452
>ref|XP_008808676.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Phoenix
dactylifera] gi|672177180|ref|XP_008808677.1| PREDICTED:
RNA polymerase II-associated protein 3 isoform X2
[Phoenix dactylifera]
Length = 351
Score = 238 bits (606), Expect = 9e-60
Identities = 126/221 (57%), Positives = 160/221 (72%), Gaps = 1/221 (0%)
Frame = -1
Query: 1000 DSNGMAANKRLITVNDEGGKVTGVDTR-KLVDGSHGSAALTSTERSVKVNQGVGRQKRDL 824
DS G N+ LI VND + T +TR +L+D S A L+S+ K +Q VG K++L
Sbjct: 131 DSKGKTHNQPLIAVNDTDSESTEKETRERLLDESREGAGLSSSNAITKKDQVVGH-KQEL 189
Query: 823 NASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRALSGDSEKQAFLLKSISPATLPQ 644
ASMQ +ASRAASRVMATA K+I+ PK+AYEFE+SWRALS D Q LLK+I P TLPQ
Sbjct: 190 KASMQDLASRAASRVMATADKSITAPKTAYEFEVSWRALSDDYALQTQLLKTILPTTLPQ 249
Query: 643 IFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTKIPRFDMIVMCLSAVDHAEIHRL 464
IFKNALSAP+L++IIKC ELAVSIL+NL K+PRFDM+VMC+SA+D +E+ ++
Sbjct: 250 IFKNALSAPILMDIIKCITTFFKEDTELAVSILDNLAKVPRFDMLVMCMSAMDRSELRQI 309
Query: 463 WEHVFSTKDIRTNLAEILSRLRPKFCYGEWQAHVLGSTGWP 341
WE VFS++DI N E LS+L ++CYG+WQ HV GS GWP
Sbjct: 310 WEEVFSSEDIAANHMETLSQLCSRYCYGDWQDHVHGSNGWP 350
>ref|XP_008808674.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Phoenix
dactylifera] gi|672177176|ref|XP_008808675.1| PREDICTED:
RNA polymerase II-associated protein 3 isoform X1
[Phoenix dactylifera]
Length = 416
Score = 238 bits (606), Expect = 9e-60
Identities = 126/221 (57%), Positives = 160/221 (72%), Gaps = 1/221 (0%)
Frame = -1
Query: 1000 DSNGMAANKRLITVNDEGGKVTGVDTR-KLVDGSHGSAALTSTERSVKVNQGVGRQKRDL 824
DS G N+ LI VND + T +TR +L+D S A L+S+ K +Q VG K++L
Sbjct: 196 DSKGKTHNQPLIAVNDTDSESTEKETRERLLDESREGAGLSSSNAITKKDQVVGH-KQEL 254
Query: 823 NASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRALSGDSEKQAFLLKSISPATLPQ 644
ASMQ +ASRAASRVMATA K+I+ PK+AYEFE+SWRALS D Q LLK+I P TLPQ
Sbjct: 255 KASMQDLASRAASRVMATADKSITAPKTAYEFEVSWRALSDDYALQTQLLKTILPTTLPQ 314
Query: 643 IFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTKIPRFDMIVMCLSAVDHAEIHRL 464
IFKNALSAP+L++IIKC ELAVSIL+NL K+PRFDM+VMC+SA+D +E+ ++
Sbjct: 315 IFKNALSAPILMDIIKCITTFFKEDTELAVSILDNLAKVPRFDMLVMCMSAMDRSELRQI 374
Query: 463 WEHVFSTKDIRTNLAEILSRLRPKFCYGEWQAHVLGSTGWP 341
WE VFS++DI N E LS+L ++CYG+WQ HV GS GWP
Sbjct: 375 WEEVFSSEDIAANHMETLSQLCSRYCYGDWQDHVHGSNGWP 415
>ref|XP_008781119.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X4
[Phoenix dactylifera]
Length = 346
Score = 233 bits (595), Expect = 2e-58
Identities = 140/287 (48%), Positives = 170/287 (59%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKGVQNV 1058
+EFA+RLEPNNQEL+KQYT K SGPLK S QG++ V NSEM K +
Sbjct: 107 SEFAMRLEPNNQELKKQYTETKALYEKEIDKKISGPLKKSFQGIEGVSNSEMGTKNARGD 166
Query: 1057 LAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRKLVDGSHGSAALTS 878
VSSN+ +AA T+
Sbjct: 167 HLVSSNSQ----------------------------------------------NAAATA 180
Query: 877 TERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRALSGD 698
K +Q VGR K L ASMQ +ASRAASRVMATA K+I+ PK+AYEFE+SWRALS D
Sbjct: 181 HGAQSKKDQDVGR-KHVLKASMQDLASRAASRVMATAGKSIAAPKTAYEFEVSWRALSDD 239
Query: 697 SEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTKIPRF 518
Q LLKSI P LPQIFKNALS P+LI+IIKCT ELAV+IL+NL K+PRF
Sbjct: 240 CALQTQLLKSIPPPALPQIFKNALSVPILIDIIKCTTTFFKEDTELAVNILDNLAKVPRF 299
Query: 517 DMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFCYGE 377
DM+VMCLS+ D +E+ ++WE VFS+KDI N E LSRLR ++C G+
Sbjct: 300 DMMVMCLSSADRSELQQIWEEVFSSKDIAANYIETLSRLRSRYCNGK 346
>ref|XP_008781117.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
[Phoenix dactylifera]
Length = 420
Score = 233 bits (595), Expect = 2e-58
Identities = 140/287 (48%), Positives = 170/287 (59%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKGVQNV 1058
+EFA+RLEPNNQEL+KQYT K SGPLK S QG++ V NSEM K +
Sbjct: 181 SEFAMRLEPNNQELKKQYTETKALYEKEIDKKISGPLKKSFQGIEGVSNSEMGTKNARGD 240
Query: 1057 LAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRKLVDGSHGSAALTS 878
VSSN+ +AA T+
Sbjct: 241 HLVSSNSQ----------------------------------------------NAAATA 254
Query: 877 TERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRALSGD 698
K +Q VGR K L ASMQ +ASRAASRVMATA K+I+ PK+AYEFE+SWRALS D
Sbjct: 255 HGAQSKKDQDVGR-KHVLKASMQDLASRAASRVMATAGKSIAAPKTAYEFEVSWRALSDD 313
Query: 697 SEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTKIPRF 518
Q LLKSI P LPQIFKNALS P+LI+IIKCT ELAV+IL+NL K+PRF
Sbjct: 314 CALQTQLLKSIPPPALPQIFKNALSVPILIDIIKCTTTFFKEDTELAVNILDNLAKVPRF 373
Query: 517 DMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFCYGE 377
DM+VMCLS+ D +E+ ++WE VFS+KDI N E LSRLR ++C G+
Sbjct: 374 DMMVMCLSSADRSELQQIWEEVFSSKDIAANYIETLSRLRSRYCNGK 420
>ref|XP_008781116.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
[Phoenix dactylifera]
Length = 444
Score = 233 bits (595), Expect = 2e-58
Identities = 140/287 (48%), Positives = 170/287 (59%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKGVQNV 1058
+EFA+RLEPNNQEL+KQYT K SGPLK S QG++ V NSEM K +
Sbjct: 205 SEFAMRLEPNNQELKKQYTETKALYEKEIDKKISGPLKKSFQGIEGVSNSEMGTKNARGD 264
Query: 1057 LAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRKLVDGSHGSAALTS 878
VSSN+ +AA T+
Sbjct: 265 HLVSSNSQ----------------------------------------------NAAATA 278
Query: 877 TERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRALSGD 698
K +Q VGR K L ASMQ +ASRAASRVMATA K+I+ PK+AYEFE+SWRALS D
Sbjct: 279 HGAQSKKDQDVGR-KHVLKASMQDLASRAASRVMATAGKSIAAPKTAYEFEVSWRALSDD 337
Query: 697 SEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTKIPRF 518
Q LLKSI P LPQIFKNALS P+LI+IIKCT ELAV+IL+NL K+PRF
Sbjct: 338 CALQTQLLKSIPPPALPQIFKNALSVPILIDIIKCTTTFFKEDTELAVNILDNLAKVPRF 397
Query: 517 DMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFCYGE 377
DM+VMCLS+ D +E+ ++WE VFS+KDI N E LSRLR ++C G+
Sbjct: 398 DMMVMCLSSADRSELQQIWEEVFSSKDIAANYIETLSRLRSRYCNGK 444
>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 213 bits (543), Expect = 2e-52
Identities = 124/286 (43%), Positives = 170/286 (59%), Gaps = 1/286 (0%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKG-VQN 1061
AEFA+RLEP NQE++KQY + SG LKSS QGL++V S + + Q
Sbjct: 818 AEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQKVGKSVVEVNADTQG 877
Query: 1060 VLAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRKLVDGSHGSAALT 881
V ++SS++ A +A + M ++ + K TG R +G +A
Sbjct: 878 VRSISSSSQGAGEAA----IQDRFMVPANTSTSMEETENKGTG--NRSKENGYLENAVQN 931
Query: 880 STERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRALSG 701
S V N G+ R++ +S+Q +ASRAASR M A KNI+ P SAY+FE+SWR L G
Sbjct: 932 SGLEDVMSNHKTGQ--REMKSSLQELASRAASRAMVEAAKNITAPNSAYQFEVSWRGLLG 989
Query: 700 DSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTKIPR 521
D QA LK+ISP LPQIFKNALSAP+LI+IIKC A +LAV L+NLTKI R
Sbjct: 990 DHALQASYLKAISPNALPQIFKNALSAPILIDIIKCIATFFVTEMDLAVKFLDNLTKISR 1049
Query: 520 FDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFCY 383
FDMI+MCLS+ D ++ ++W+ VF K + A+ L +LRP++C+
Sbjct: 1050 FDMIIMCLSSTDKTDLLKIWDEVFCNKATPSGYADTLGKLRPRYCF 1095
>ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Vitis
vinifera]
Length = 474
Score = 213 bits (543), Expect = 2e-52
Identities = 124/286 (43%), Positives = 170/286 (59%), Gaps = 1/286 (0%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKG-VQN 1061
AEFA+RLEP NQE++KQY + SG LKSS QGL++V S + + Q
Sbjct: 195 AEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQKVGKSVVEVNADTQG 254
Query: 1060 VLAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRKLVDGSHGSAALT 881
V ++SS++ A +A + M ++ + K TG R +G +A
Sbjct: 255 VRSISSSSQGAGEAA----IQDRFMVPANTSTSMEETENKGTG--NRSKENGYLENAVQN 308
Query: 880 STERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRALSG 701
S V N G+ R++ +S+Q +ASRAASR M A KNI+ P SAY+FE+SWR L G
Sbjct: 309 SGLEDVMSNHKTGQ--REMKSSLQELASRAASRAMVEAAKNITAPNSAYQFEVSWRGLLG 366
Query: 700 DSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTKIPR 521
D QA LK+ISP LPQIFKNALSAP+LI+IIKC A +LAV L+NLTKI R
Sbjct: 367 DHALQASYLKAISPNALPQIFKNALSAPILIDIIKCIATFFVTEMDLAVKFLDNLTKISR 426
Query: 520 FDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFCY 383
FDMI+MCLS+ D ++ ++W+ VF K + A+ L +LRP++C+
Sbjct: 427 FDMIIMCLSSTDKTDLLKIWDEVFCNKATPSGYADTLGKLRPRYCF 472
>ref|XP_011038929.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X6
[Populus euphratica]
Length = 462
Score = 206 bits (524), Expect = 3e-50
Identities = 117/288 (40%), Positives = 174/288 (60%), Gaps = 4/288 (1%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKG-VQN 1061
+EFA++LEP NQE++KQY + SG L+SS QG ++ SE ++ G +
Sbjct: 174 SEFALKLEPINQEIKKQYAEVKSLYEKEILQKASGALRSSLQGTQKGGRSEASVNGHAVH 233
Query: 1060 VLAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRK---LVDGSHGSA 890
+++ + + S + + +++G K+ + V + K TG ++ + + S +A
Sbjct: 234 PVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGSKSDGHVGNDSPANA 293
Query: 889 ALTSTERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRA 710
L+S+ SV+ N RQ +L S+ +AS+AASR MA A KNI+ P SAY+FE+SWR
Sbjct: 294 TLSSSVDSVQKNNRTQRQ--ELKTSVMELASQAASRAMAEAAKNITPPNSAYQFEVSWRG 351
Query: 709 LSGDSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTK 530
SGD QA LLK SP+ LPQIFKNALS P+LI+IIKC A +LAV LENLTK
Sbjct: 352 FSGDRALQAHLLKVTSPSALPQIFKNALSVPILIDIIKCVASFFIDDMDLAVKYLENLTK 411
Query: 529 IPRFDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFC 386
+PRF +++MCLS+ D +++ ++W+ VF + AEIL LR K+C
Sbjct: 412 VPRFGVLIMCLSSTDTSDLLKMWDGVFCSASTPIEYAEILDNLRSKYC 459
>ref|XP_011038928.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X5
[Populus euphratica]
Length = 462
Score = 206 bits (524), Expect = 3e-50
Identities = 117/288 (40%), Positives = 174/288 (60%), Gaps = 4/288 (1%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKG-VQN 1061
+EFA++LEP NQE++KQY + SG L+SS QG ++ SE ++ G +
Sbjct: 174 SEFALKLEPINQEIKKQYAEVKSLYEKEILQKASGALRSSLQGTQKGGRSEASVNGHAVH 233
Query: 1060 VLAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRK---LVDGSHGSA 890
+++ + + S + + +++G K+ + V + K TG ++ + + S +A
Sbjct: 234 PVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGSKSDGHVGNDSPANA 293
Query: 889 ALTSTERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRA 710
L+S+ SV+ N RQ +L S+ +AS+AASR MA A KNI+ P SAY+FE+SWR
Sbjct: 294 TLSSSVDSVQKNNRTQRQ--ELKTSVMELASQAASRAMAEAAKNITPPNSAYQFEVSWRG 351
Query: 709 LSGDSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTK 530
SGD QA LLK SP+ LPQIFKNALS P+LI+IIKC A +LAV LENLTK
Sbjct: 352 FSGDRALQAHLLKVTSPSALPQIFKNALSVPILIDIIKCVASFFIDDMDLAVKYLENLTK 411
Query: 529 IPRFDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFC 386
+PRF +++MCLS+ D +++ ++W+ VF + AEIL LR K+C
Sbjct: 412 VPRFGVLIMCLSSTDTSDLLKMWDGVFCSASTPIEYAEILDNLRSKYC 459
>ref|XP_011038927.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X4
[Populus euphratica]
Length = 463
Score = 206 bits (524), Expect = 3e-50
Identities = 117/288 (40%), Positives = 174/288 (60%), Gaps = 4/288 (1%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKG-VQN 1061
+EFA++LEP NQE++KQY + SG L+SS QG ++ SE ++ G +
Sbjct: 175 SEFALKLEPINQEIKKQYAEVKSLYEKEILQKASGALRSSLQGTQKGGRSEASVNGHAVH 234
Query: 1060 VLAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRK---LVDGSHGSA 890
+++ + + S + + +++G K+ + V + K TG ++ + + S +A
Sbjct: 235 PVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGSKSDGHVGNDSPANA 294
Query: 889 ALTSTERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRA 710
L+S+ SV+ N RQ +L S+ +AS+AASR MA A KNI+ P SAY+FE+SWR
Sbjct: 295 TLSSSVDSVQKNNRTQRQ--ELKTSVMELASQAASRAMAEAAKNITPPNSAYQFEVSWRG 352
Query: 709 LSGDSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTK 530
SGD QA LLK SP+ LPQIFKNALS P+LI+IIKC A +LAV LENLTK
Sbjct: 353 FSGDRALQAHLLKVTSPSALPQIFKNALSVPILIDIIKCVASFFIDDMDLAVKYLENLTK 412
Query: 529 IPRFDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFC 386
+PRF +++MCLS+ D +++ ++W+ VF + AEIL LR K+C
Sbjct: 413 VPRFGVLIMCLSSTDTSDLLKMWDGVFCSASTPIEYAEILDNLRSKYC 460
>ref|XP_011038926.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X3
[Populus euphratica]
Length = 472
Score = 206 bits (524), Expect = 3e-50
Identities = 117/288 (40%), Positives = 174/288 (60%), Gaps = 4/288 (1%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKG-VQN 1061
+EFA++LEP NQE++KQY + SG L+SS QG ++ SE ++ G +
Sbjct: 184 SEFALKLEPINQEIKKQYAEVKSLYEKEILQKASGALRSSLQGTQKGGRSEASVNGHAVH 243
Query: 1060 VLAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRK---LVDGSHGSA 890
+++ + + S + + +++G K+ + V + K TG ++ + + S +A
Sbjct: 244 PVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGSKSDGHVGNDSPANA 303
Query: 889 ALTSTERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRA 710
L+S+ SV+ N RQ +L S+ +AS+AASR MA A KNI+ P SAY+FE+SWR
Sbjct: 304 TLSSSVDSVQKNNRTQRQ--ELKTSVMELASQAASRAMAEAAKNITPPNSAYQFEVSWRG 361
Query: 709 LSGDSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTK 530
SGD QA LLK SP+ LPQIFKNALS P+LI+IIKC A +LAV LENLTK
Sbjct: 362 FSGDRALQAHLLKVTSPSALPQIFKNALSVPILIDIIKCVASFFIDDMDLAVKYLENLTK 421
Query: 529 IPRFDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFC 386
+PRF +++MCLS+ D +++ ++W+ VF + AEIL LR K+C
Sbjct: 422 VPRFGVLIMCLSSTDTSDLLKMWDGVFCSASTPIEYAEILDNLRSKYC 469
>ref|XP_011038925.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
[Populus euphratica]
Length = 472
Score = 206 bits (524), Expect = 3e-50
Identities = 117/288 (40%), Positives = 174/288 (60%), Gaps = 4/288 (1%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKG-VQN 1061
+EFA++LEP NQE++KQY + SG L+SS QG ++ SE ++ G +
Sbjct: 184 SEFALKLEPINQEIKKQYAEVKSLYEKEILQKASGALRSSLQGTQKGGRSEASVNGHAVH 243
Query: 1060 VLAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRK---LVDGSHGSA 890
+++ + + S + + +++G K+ + V + K TG ++ + + S +A
Sbjct: 244 PVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGSKSDGHVGNDSPANA 303
Query: 889 ALTSTERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRA 710
L+S+ SV+ N RQ +L S+ +AS+AASR MA A KNI+ P SAY+FE+SWR
Sbjct: 304 TLSSSVDSVQKNNRTQRQ--ELKTSVMELASQAASRAMAEAAKNITPPNSAYQFEVSWRG 361
Query: 709 LSGDSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTK 530
SGD QA LLK SP+ LPQIFKNALS P+LI+IIKC A +LAV LENLTK
Sbjct: 362 FSGDRALQAHLLKVTSPSALPQIFKNALSVPILIDIIKCVASFFIDDMDLAVKYLENLTK 421
Query: 529 IPRFDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFC 386
+PRF +++MCLS+ D +++ ++W+ VF + AEIL LR K+C
Sbjct: 422 VPRFGVLIMCLSSTDTSDLLKMWDGVFCSASTPIEYAEILDNLRSKYC 469
>ref|XP_011038924.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
[Populus euphratica]
Length = 473
Score = 206 bits (524), Expect = 3e-50
Identities = 117/288 (40%), Positives = 174/288 (60%), Gaps = 4/288 (1%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKG-VQN 1061
+EFA++LEP NQE++KQY + SG L+SS QG ++ SE ++ G +
Sbjct: 185 SEFALKLEPINQEIKKQYAEVKSLYEKEILQKASGALRSSLQGTQKGGRSEASVNGHAVH 244
Query: 1060 VLAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTRK---LVDGSHGSA 890
+++ + + S + + +++G K+ + V + K TG ++ + + S +A
Sbjct: 245 PVSIPTQNTGVSASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGSKSDGHVGNDSPANA 304
Query: 889 ALTSTERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWRA 710
L+S+ SV+ N RQ +L S+ +AS+AASR MA A KNI+ P SAY+FE+SWR
Sbjct: 305 TLSSSVDSVQKNNRTQRQ--ELKTSVMELASQAASRAMAEAAKNITPPNSAYQFEVSWRG 362
Query: 709 LSGDSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLTK 530
SGD QA LLK SP+ LPQIFKNALS P+LI+IIKC A +LAV LENLTK
Sbjct: 363 FSGDRALQAHLLKVTSPSALPQIFKNALSVPILIDIIKCVASFFIDDMDLAVKYLENLTK 422
Query: 529 IPRFDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFC 386
+PRF +++MCLS+ D +++ ++W+ VF + AEIL LR K+C
Sbjct: 423 VPRFGVLIMCLSSTDTSDLLKMWDGVFCSASTPIEYAEILDNLRSKYC 470
>ref|XP_011023789.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X5 [Populus
euphratica]
Length = 462
Score = 206 bits (524), Expect = 3e-50
Identities = 119/289 (41%), Positives = 175/289 (60%), Gaps = 5/289 (1%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKG--VQ 1064
+EFA++LEPNNQE++KQY + S L+SS QG K+ SE ++ G V
Sbjct: 174 SEFALKLEPNNQEIKKQYAEVKSLYEKEILQKASESLRSSLQGAKKGGRSETSVNGHAVH 233
Query: 1063 NVLAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTR---KLVDGSHGS 893
V V+ A+A+ + +++G K+ + V + K TG +R +L + S +
Sbjct: 234 PVSNVTRRTGASASQKDKAK-ENDGDGVVKKSVYVEEIKNKSTGAGSRSDGQLGNDSRAN 292
Query: 892 AALTSTERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWR 713
A +S ++ N GRQ +L AS++ +AS+AASR MA A KNI+ P SAY+FE+SWR
Sbjct: 293 AIPSSNAEIIQRNNRAGRQ--ELKASVKELASQAASRAMAEAAKNITPPNSAYQFEVSWR 350
Query: 712 ALSGDSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLT 533
SGD QA LLK +P+ LPQIFKNALS +LI+IIKC +LAV LENLT
Sbjct: 351 GFSGDRALQAHLLKVTTPSALPQIFKNALSVTILIDIIKCVFSFFINDMDLAVKYLENLT 410
Query: 532 KIPRFDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFC 386
K+PRFD+++MCL + D A++ ++W+ VF ++ AEIL ++R ++C
Sbjct: 411 KVPRFDILIMCLPSTDKADLLKMWDEVFCSEATPIEYAEILDKMRSRYC 459
>ref|XP_011023788.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X4 [Populus
euphratica]
Length = 463
Score = 206 bits (524), Expect = 3e-50
Identities = 119/289 (41%), Positives = 175/289 (60%), Gaps = 5/289 (1%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKG--VQ 1064
+EFA++LEPNNQE++KQY + S L+SS QG K+ SE ++ G V
Sbjct: 175 SEFALKLEPNNQEIKKQYAEVKSLYEKEILQKASESLRSSLQGAKKGGRSETSVNGHAVH 234
Query: 1063 NVLAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTR---KLVDGSHGS 893
V V+ A+A+ + +++G K+ + V + K TG +R +L + S +
Sbjct: 235 PVSNVTRRTGASASQKDKAK-ENDGDGVVKKSVYVEEIKNKSTGAGSRSDGQLGNDSRAN 293
Query: 892 AALTSTERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWR 713
A +S ++ N GRQ +L AS++ +AS+AASR MA A KNI+ P SAY+FE+SWR
Sbjct: 294 AIPSSNAEIIQRNNRAGRQ--ELKASVKELASQAASRAMAEAAKNITPPNSAYQFEVSWR 351
Query: 712 ALSGDSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLT 533
SGD QA LLK +P+ LPQIFKNALS +LI+IIKC +LAV LENLT
Sbjct: 352 GFSGDRALQAHLLKVTTPSALPQIFKNALSVTILIDIIKCVFSFFINDMDLAVKYLENLT 411
Query: 532 KIPRFDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFC 386
K+PRFD+++MCL + D A++ ++W+ VF ++ AEIL ++R ++C
Sbjct: 412 KVPRFDILIMCLPSTDKADLLKMWDEVFCSEATPIEYAEILDKMRSRYC 460
>ref|XP_011023786.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Populus
euphratica]
Length = 472
Score = 206 bits (524), Expect = 3e-50
Identities = 119/289 (41%), Positives = 175/289 (60%), Gaps = 5/289 (1%)
Frame = -1
Query: 1237 AEFAIRLEPNNQELRKQYTXXXXXXXXXXXKNNSGPLKSSSQGLKEVDNSEMAMKG--VQ 1064
+EFA++LEPNNQE++KQY + S L+SS QG K+ SE ++ G V
Sbjct: 184 SEFALKLEPNNQEIKKQYAEVKSLYEKEILQKASESLRSSLQGAKKGGRSETSVNGHAVH 243
Query: 1063 NVLAVSSNAPAAATSAQTSNVDSNGMAANKRLITVNDEGGKVTGVDTR---KLVDGSHGS 893
V V+ A+A+ + +++G K+ + V + K TG +R +L + S +
Sbjct: 244 PVSNVTRRTGASASQKDKAK-ENDGDGVVKKSVYVEEIKNKSTGAGSRSDGQLGNDSRAN 302
Query: 892 AALTSTERSVKVNQGVGRQKRDLNASMQHIASRAASRVMATAVKNISVPKSAYEFELSWR 713
A +S ++ N GRQ +L AS++ +AS+AASR MA A KNI+ P SAY+FE+SWR
Sbjct: 303 AIPSSNAEIIQRNNRAGRQ--ELKASVKELASQAASRAMAEAAKNITPPNSAYQFEVSWR 360
Query: 712 ALSGDSEKQAFLLKSISPATLPQIFKNALSAPMLIEIIKCTAXXXXXXXELAVSILENLT 533
SGD QA LLK +P+ LPQIFKNALS +LI+IIKC +LAV LENLT
Sbjct: 361 GFSGDRALQAHLLKVTTPSALPQIFKNALSVTILIDIIKCVFSFFINDMDLAVKYLENLT 420
Query: 532 KIPRFDMIVMCLSAVDHAEIHRLWEHVFSTKDIRTNLAEILSRLRPKFC 386
K+PRFD+++MCL + D A++ ++W+ VF ++ AEIL ++R ++C
Sbjct: 421 KVPRFDILIMCLPSTDKADLLKMWDEVFCSEATPIEYAEILDKMRSRYC 469