BLASTX nr result
ID: Anemarrhena21_contig00000081
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00000081
(2745 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 1568 0.0
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 1568 0.0
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial... 1567 0.0
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su... 1562 0.0
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su... 1558 0.0
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 1550 0.0
ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II su... 1536 0.0
gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium r... 1536 0.0
ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II su... 1536 0.0
ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II su... 1528 0.0
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 1527 0.0
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ... 1527 0.0
ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II su... 1526 0.0
ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II su... 1526 0.0
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su... 1525 0.0
ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun... 1521 0.0
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su... 1521 0.0
ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II su... 1520 0.0
ref|XP_011022252.1| PREDICTED: DNA-directed RNA polymerase II su... 1520 0.0
ref|XP_012469269.1| PREDICTED: DNA-directed RNA polymerase II su... 1519 0.0
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 1568 bits (4061), Expect = 0.0
Identities = 777/850 (91%), Positives = 796/850 (93%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETC ANMAECPGHFGHLELAKPM+HIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKIRNPK+RLKRIYDACK+KKKCA SEE IKKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
IDGMKM+AEYKA KKKS+D EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYA 240
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NL+RTSAWHSE+E+GFITPGDT VRIE SLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNDVK+LIKLAQ+KQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 841 EGLIDTAVKT 850
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 1568 bits (4060), Expect = 0.0
Identities = 776/850 (91%), Positives = 796/850 (93%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETC ANMAECPGHFGHLELAKPM+HIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKIRNPK+RLKRIYDACK+KKKCA SEE IKKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
IDGMKM+AEYKA KKKS+D EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYA 240
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
TEFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NL+RTSAWHSE+E+GFITPGDT VRIE SLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNDVK+LIKLAQ+KQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 841 EGLIDTAVKT 850
>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 1567 bits (4057), Expect = 0.0
Identities = 777/850 (91%), Positives = 796/850 (93%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETC ANMAECPGHFGHLELAKPM+HIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKIRNPK+RLKRIYDACK+KKKCA SEE +KKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
IDGMKM+AEYKA KKKS+D EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGLNPKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPKYA 240
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPLPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NL+RTSAWHSE+E+GFITPGDT VRIE SLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGXLLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNDVK+LIKLAQ+KQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 841 EGLIDTAVKT 850
>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
subsp. malaccensis]
Length = 1832
Score = 1562 bits (4044), Expect = 0.0
Identities = 773/850 (90%), Positives = 794/850 (93%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD RFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQ+EHGETMERGKPK GLSDPRLGTI
Sbjct: 1 MDTRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPAGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETC ANMAECPGHFGHLELAKPM+HIGF+KTVLAIMRCVCFNCSKILADEED R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDTR 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKIRNPKNRLKRIYDACKSKKKC+ SEE +KKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCSGGDDIDVQGQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
IDGMKMVAEYKA KKKS++ EQLPEP ERKQ LSAERVLSVLKRISDEDCLLLGLNPKYA
Sbjct: 181 IDGMKMVAEYKAPKKKSDEQEQLPEPAERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 240
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGH+IKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLCDGDFVLFNRQPSLHKMSIMGHKIKIMPYS 480
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NL+R SAWHSESE+GFITPGDT VRIE SLIHVIWEEVGPDA
Sbjct: 601 NLIRFSAWHSESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQ+KQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQEKQ 720
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LE EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 841 EGLIDTAVKT 850
>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 1558 bits (4035), Expect = 0.0
Identities = 771/850 (90%), Positives = 793/850 (93%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDVRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETC ANMAECPGHFGHLELAKPM+HIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKIRNPK+RLKRI DACKSKKKCA SEE IKKSRGGCG+QQP IT
Sbjct: 121 FKQALKIRNPKHRLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTIT 180
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
IDGMKMVAEYKA KKKS+D +QLPEPVERKQ LSA+RVLSVLKRISDEDC+LLGLNP+YA
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQDQLPEPVERKQILSADRVLSVLKRISDEDCILLGLNPQYA 240
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIE DVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEMDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NL+RTSAWHSE+E+GFITPGDT VRIE SLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQN FS+GIGDTIADA TMEKINETISKAKNDVK+LIKLAQ+KQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSMGIGDTIADAVTMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 841 EGLIDTAVKT 850
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 1550 bits (4013), Expect = 0.0
Identities = 764/850 (89%), Positives = 792/850 (93%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETCTANMAECPGHFGHLELAKPM+HIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK A KIRNPKNRLK+I DACK+K KC S+E +KKSRGGCGAQQP +T
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALD-SDEPVKKSRGGCGAQQPKLT 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
I+GMKM+AEYK +KK++DPEQLPEPVERKQQLSAERVL+VLKRISDEDC+LLGLNPKYA
Sbjct: 180 IEGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NLLRTSAWHSESE+GFITPGDTQVRIE SLIHVIWEEVGPDA
Sbjct: 600 NLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKN+VK+LI+ AQ++Q
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQ 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
[Gossypium raimondii]
Length = 1832
Score = 1536 bits (3978), Expect = 0.0
Identities = 758/850 (89%), Positives = 788/850 (92%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRKLKCETCTANMAECPGHFGHLELAKPM+HIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKI+NPKNRLK+I DACK+K KC +EE +KKSRGGCGAQQP +T
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQD-AEEPVKKSRGGCGAQQPKLT 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
IDGMKM+AEYKA +KK++DPEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 180 IDGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTH LAMIIRHNENLRRQERNG+PAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NLLRTSAWHSESE+G ITPGDTQVRIE SLIHVIWEEVGPDA
Sbjct: 600 NLLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISKAK+DVK LI AQ+K
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKD 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LEPEPGRTMMESFENKVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
Length = 1809
Score = 1536 bits (3978), Expect = 0.0
Identities = 758/850 (89%), Positives = 788/850 (92%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRKLKCETCTANMAECPGHFGHLELAKPM+HIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKI+NPKNRLK+I DACK+K KC +EE +KKSRGGCGAQQP +T
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQD-AEEPVKKSRGGCGAQQPKLT 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
IDGMKM+AEYKA +KK++DPEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 180 IDGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTH LAMIIRHNENLRRQERNG+PAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NLLRTSAWHSESE+G ITPGDTQVRIE SLIHVIWEEVGPDA
Sbjct: 600 NLLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISKAK+DVK LI AQ+K
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKD 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LEPEPGRTMMESFENKVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|823191464|ref|XP_012491468.1|
PREDICTED: DNA-directed RNA polymerase II subunit 1
isoform X1 [Gossypium raimondii]
gi|823191467|ref|XP_012491470.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 isoform X1 [Gossypium
raimondii] gi|823191470|ref|XP_012491471.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|763776132|gb|KJB43255.1|
hypothetical protein B456_007G190500 [Gossypium
raimondii] gi|763776133|gb|KJB43256.1| hypothetical
protein B456_007G190500 [Gossypium raimondii]
gi|763776135|gb|KJB43258.1| hypothetical protein
B456_007G190500 [Gossypium raimondii]
Length = 1846
Score = 1536 bits (3978), Expect = 0.0
Identities = 758/850 (89%), Positives = 788/850 (92%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRKLKCETCTANMAECPGHFGHLELAKPM+HIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKI+NPKNRLK+I DACK+K KC +EE +KKSRGGCGAQQP +T
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQD-AEEPVKKSRGGCGAQQPKLT 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
IDGMKM+AEYKA +KK++DPEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 180 IDGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTH LAMIIRHNENLRRQERNG+PAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NLLRTSAWHSESE+G ITPGDTQVRIE SLIHVIWEEVGPDA
Sbjct: 600 NLLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISKAK+DVK LI AQ+K
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKD 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LEPEPGRTMMESFENKVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Sesamum indicum]
Length = 1848
Score = 1528 bits (3956), Expect = 0.0
Identities = 750/850 (88%), Positives = 786/850 (92%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD+RFPYSPAEVAK+R VQFGILSPDEIRQMSVV +EH ET ERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETC ANMA+CPGHFGHLELAKPM+HIGFMKTVL+I+RCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCMANMADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK AL+IRNPKNRLK+I DACK+K KC ++E +KK+RGGCGAQQP I+
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDVQGQD-TDEPVKKTRGGCGAQQPKIS 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
IDGMKMVAEYK KKK++DPEQ+PEPVERKQQLSAE+VLS+LKRI+DEDC LLGLNPKYA
Sbjct: 180 IDGMKMVAEYKIQKKKNDDPEQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKYA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
R+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH+IKIMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NLLR SAWH ESE GFITPGDTQVRIE SLIHVIWEEVGPDA
Sbjct: 600 NLLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETIS AKN+VK+LI+ AQ+KQ
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQ 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 1527 bits (3953), Expect = 0.0
Identities = 754/850 (88%), Positives = 784/850 (92%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD RFPYSPAEV+KVR VQFGILSPD IRQMSVVQ+EH ET E+GKPK GGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETC ANMAECPGHFGHLELAKPM+HIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK A +IRNPKNRLK++ DACK+K KC E IKK RGGCGAQQP +T
Sbjct: 121 FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGEP-IKKRRGGCGAQQPKLT 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
I+GMKM+AEYKA +KK++D EQLPEPVERKQQLSAERVLSVLKRISDEDC+LLGLNP+YA
Sbjct: 180 IEGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NL+RTSAWHSESE+GFITPGDTQVRIE SLIHVIWEEVGPDA
Sbjct: 600 NLMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKN+VK+LI+ AQ++Q
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQ 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|590702285|ref|XP_007046586.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
Length = 1861
Score = 1527 bits (3953), Expect = 0.0
Identities = 751/850 (88%), Positives = 787/850 (92%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETCTANMAECPGHFGHLELAKPM+HIGFMKTVL+IMRCVCFNCSKILADEE+ +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKI+NPKNRLK+I DACK+K KC +EE +KKSRGGCGAQQP ++
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQD-TEEPVKKSRGGCGAQQPKLS 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
IDGMKM+AEYK +K+++D EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPK+A
Sbjct: 180 IDGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTH LAMIIRHNENLRRQERNG+PAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NLLR SAWHSE+E+GFITPGDTQVRIE SLIHVIWEEVGPDA
Sbjct: 600 NLLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAK +VK+LI AQ+K
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKD 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LEPEPGRTMMESFENKVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Eucalyptus
grandis] gi|629090320|gb|KCW56573.1| hypothetical protein
EUGRSUZ_I02304 [Eucalyptus grandis]
Length = 1852
Score = 1526 bits (3951), Expect = 0.0
Identities = 751/850 (88%), Positives = 786/850 (92%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPK+ GLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRKLKCETCTANMAECPGHFGHLELAKPM+HIGF+KTVL+IMRCVCFNCSKIL DE+D +
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILTDEDDHK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK AL+IRNPKNRLK+I DACK+K KC SEE KK+ GGCGAQQP +T
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKC-DGGDDVDTKGQGSEEPKKKNHGGCGAQQPKLT 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
I+GMKM+AEYKA +KK++D +Q+PEPVERKQ LSAERVLSVLKRISDE C LLGLNPKYA
Sbjct: 180 IEGMKMIAEYKAQRKKNDDQDQIPEPVERKQTLSAERVLSVLKRISDEHCQLLGLNPKYA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRQQERNGAPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMN+LMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNVLMWWEDFDGKVPTPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NLLR SAWHSE+E+GFITPGDTQVRIE SLIHVIWEEVGPDA
Sbjct: 600 NLLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AK++VK LIK AQ+K+
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISSAKDEVKRLIKDAQEKK 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIP+GFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Setaria italica]
Length = 1852
Score = 1526 bits (3951), Expect = 0.0
Identities = 753/850 (88%), Positives = 784/850 (92%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSV+Q+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETC A MAECPGHFGHLELAKPM+HIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61 DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKIRNPKNRLKRIYDACKSKK CA ++E +KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
+DGMKMVAE+KA KKK++D +QLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK+A
Sbjct: 180 VDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
REDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDT IEKDVFMN LMWW+DFDGKIPAPAILKPRP+WTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTLIEKDVFMNTLMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NL+R SAWHSE+E+GFITPGDT VRIE SLIHVIWEEVGPDA
Sbjct: 600 NLIRFSAWHSETETGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQ FSIGIGDTIADAATMEKINETISKAKN+VK+LIK AQDK
Sbjct: 660 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISKAKNEVKELIKQAQDKH 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
brachyantha]
Length = 1855
Score = 1525 bits (3948), Expect = 0.0
Identities = 753/850 (88%), Positives = 783/850 (92%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETC A MAECPGHFGHLELAKPM+HIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61 DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKIRNPKNRLKRIYDACKSKK CA ++E +K+ RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKR-RGGCGAQQPNIT 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
+DGMKMVAE+KA KKK++D EQLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK+A
Sbjct: 180 VDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
REDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDT IEKDVFMNILMWWEDFDGK+PAPAILKPRP+WTGKQVFNLIIPK I
Sbjct: 540 TLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NL+R SAWHSE+E+GFITPGDT VRIE SLIHVIWEEVGPDA
Sbjct: 600 NLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKN+VK+LIK A DK
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISTAKNEVKELIKQAHDKH 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
[Populus trichocarpa] gi|550338614|gb|ERP60834.1|
DNA-directed RNA polymerase II largest subunit family
protein [Populus trichocarpa]
Length = 1837
Score = 1521 bits (3938), Expect = 0.0
Identities = 748/850 (88%), Positives = 784/850 (92%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD RFPYSPAEVAKVR VQFGILSPDEIRQMSV+Q+EH ET ERGKPK GGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETCTANMAECPGHFGHLELAKPM+HIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKI+NPK+RLK+I DACK+K KC +EE +KKSRGGCGAQQP +T
Sbjct: 121 FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQD-NEEPVKKSRGGCGAQQPKLT 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
I+GMKM+AEYK +KKS+D EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+PKYA
Sbjct: 180 IEGMKMIAEYKVQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQER+GAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP I+KPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NL+RT+AWH +SE G ITPGDT VRIE SLIHVIWEEVGPDA
Sbjct: 600 NLIRTAAWHMDSERGMITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETIS AKN+VKDLI+ AQ+K+
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKNEVKDLIRKAQNKE 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Fragaria vesca
subsp. vesca] gi|764511805|ref|XP_011461993.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1 [Fragaria vesca
subsp. vesca]
Length = 1842
Score = 1521 bits (3937), Expect = 0.0
Identities = 752/850 (88%), Positives = 781/850 (91%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD+RFP+SP EVAKVR VQFGILSPDEIRQMSVVQ+EH ETM GKPK GLSDPRLGTI
Sbjct: 1 MDIRFPFSPCEVAKVRRVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETCTANMAECPGHFGHLELAKPM+HIGFMKTVL+IMRCVCFNCSKIL DE+D +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK AL+I+NPKNRLK+I DACK+K KC ++E +KKSRGGCGAQQP +T
Sbjct: 121 FKTALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQD---TDEPLKKSRGGCGAQQPKLT 177
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
IDGMKMVAEYKA +KKS+D EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 178 IDGMKMVAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 237
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNG+PAHII
Sbjct: 238 RPDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHII 297
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 298 SEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 357
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 358 RTVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 417
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 418 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 477
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 478 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 537
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 538 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 597
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NL RTSAWHSESE+G ITPGDT VRIE SLIHVIWEEVGPDA
Sbjct: 598 NLQRTSAWHSESETGNITPGDTHVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDA 657
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN+VK+LI AQ K
Sbjct: 658 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKELISKAQSKS 717
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LEPEPGRTMM+SFENKVNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 718 LEPEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 777
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 778 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 837
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 838 EGLIDTAVKT 847
>ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Erythranthe
guttatus] gi|604343422|gb|EYU42342.1| hypothetical
protein MIMGU_mgv1a000091mg [Erythranthe guttata]
Length = 1842
Score = 1520 bits (3936), Expect = 0.0
Identities = 745/850 (87%), Positives = 785/850 (92%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVV +EH ET ERGKPK+GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETC ANMAECPGHFGHLELAKPM+HIGFMK VL+I+RCVCFNCSKILADEE+ +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK A++IRNPKNRL++I DACK+K KC +EE +KKSRGGCGAQQP I+
Sbjct: 121 FKQAMRIRNPKNRLRKILDACKNKTKC-DGGDEIDGHSQDTEEPVKKSRGGCGAQQPKIS 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
IDGMKMVAEYK KKKS+D +Q+PEPVERKQQLSAE+VLS+LKRI+DEDC LLGLNPK+A
Sbjct: 180 IDGMKMVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENL+RQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
R+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NLLR SAWH E+E GFITPGDTQVRIE SLIHVIWEEVGPDA
Sbjct: 600 NLLRYSAWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQNAFS+GIGDTIADAATMEKINETIS AKN+VK+LI+ AQ+KQ
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQ 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LEPEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIP+GF+ RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_011022252.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Populus
euphratica]
Length = 1837
Score = 1520 bits (3935), Expect = 0.0
Identities = 747/850 (87%), Positives = 784/850 (92%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD RFPYSPAEVAKVR VQFGILSPDEIRQMSV+Q+EH ET ERGKPK GGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETCTANMAECPGHFGHLELAKPM+HIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKI+NPK+RLK+I DACK+K KC +EE +KKSRGGCGAQQP +T
Sbjct: 121 FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQD-NEEPVKKSRGGCGAQQPKLT 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
I+GMKM+AEYK +KK++D EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+PKYA
Sbjct: 180 IEGMKMIAEYKVQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQER+GAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP I+KPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NL+RT+AWH +SE G ITPGDT VRIE SLIHVIWEEVGPDA
Sbjct: 600 NLIRTAAWHMDSERGMITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETIS AKN+VKDLI+ AQ+K+
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKNEVKDLIRKAQNKE 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_012469269.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Gossypium
raimondii] gi|763750176|gb|KJB17564.1| hypothetical
protein B456_003G005700 [Gossypium raimondii]
gi|763750177|gb|KJB17565.1| hypothetical protein
B456_003G005700 [Gossypium raimondii]
gi|763750178|gb|KJB17566.1| hypothetical protein
B456_003G005700 [Gossypium raimondii]
gi|763750179|gb|KJB17567.1| hypothetical protein
B456_003G005700 [Gossypium raimondii]
Length = 1847
Score = 1519 bits (3933), Expect = 0.0
Identities = 747/850 (87%), Positives = 783/850 (92%)
Frame = +1
Query: 196 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 375
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVV +EH ET ERGKPKVGGLSD RLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHSETTERGKPKVGGLSDTRLGTI 60
Query: 376 DRKLKCETCTANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDAR 555
DRK+KCETCTANMAECPGHFGHLELAKPM+HIGF+KTVL+IMRCVCFNCSK+LADEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDHK 120
Query: 556 FKMALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXSEESIKKSRGGCGAQQPNIT 735
FK ALKI+NPKNRLK+I DACK+K KC +EE IKKSRGGCGAQQP ++
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQD-TEEPIKKSRGGCGAQQPKLS 179
Query: 736 IDGMKMVAEYKATKKKSEDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 915
IDGMKM+AEYKA +KK++D EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 180 IDGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 239
Query: 916 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1095
RPDWMILQVL SVMMDTS+RSEDDLTH LAMIIRHNENLRRQERNG+PAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHII 299
Query: 1096 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1275
+EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1276 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1455
RTVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1456 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1635
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIRIMPYS 479
Query: 1636 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1815
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVAELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1816 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 1995
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQI 599
Query: 1996 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXXSLIHVIWEEVGPDA 2175
NL+RTSAWHSESE+GFITPGDTQVRIE SLIHVIWEEVGPDA
Sbjct: 600 NLMRTSAWHSESETGFITPGDTQVRIEKGEVLSGTLCKKALGSSAGSLIHVIWEEVGPDA 659
Query: 2176 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 2355
ARKFLGHTQWLVNYWLLQNAFS+GIGDTIADAATMEKINETISKAK DVK LI AQ+K
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISKAKEDVKQLIIKAQNKD 719
Query: 2356 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2535
LEPEPGRTMM+SFENKVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMDSFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2536 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2715
TACVGQQNVEGKRIPYGF+ RTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2716 EGLIDTAVKT 2745
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849