BLASTX nr result
ID: Anemarrhena21_contig00000080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00000080
(2737 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 1579 0.0
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 1577 0.0
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial... 1575 0.0
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su... 1570 0.0
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su... 1566 0.0
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 1558 0.0
ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II su... 1545 0.0
gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium r... 1545 0.0
ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II su... 1545 0.0
ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II su... 1536 0.0
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ... 1535 0.0
ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II su... 1535 0.0
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 1535 0.0
ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II su... 1535 0.0
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su... 1534 0.0
ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun... 1531 0.0
ref|XP_011022252.1| PREDICTED: DNA-directed RNA polymerase II su... 1530 0.0
ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II su... 1527 0.0
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su... 1526 0.0
ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II su... 1526 0.0
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 1579 bits (4088), Expect = 0.0
Identities = 785/850 (92%), Positives = 801/850 (94%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK ALKIRNPK+RLKRIYDACK+KKKCAGG DSEEP+K SRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
IDGMKM+AEYKA KKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGLSPKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYA 240
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NL+RTSAWHSE+E+GFITPGDT VRIE GSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNDVK+LIKLAQ+KQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 841 EGLIDTAVKT 850
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 1577 bits (4083), Expect = 0.0
Identities = 783/850 (92%), Positives = 800/850 (94%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK ALKIRNPK+RLKRIYDACK+KKKCAGG DSEEP+K SRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
IDGMKM+AEYKA KKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGL PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYA 240
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
TEFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NL+RTSAWHSE+E+GFITPGDT VRIE GSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNDVK+LIKLAQ+KQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 841 EGLIDTAVKT 850
>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 1575 bits (4077), Expect = 0.0
Identities = 784/850 (92%), Positives = 801/850 (94%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK ALKIRNPK+RLKRIYDACK+KKKCAGG DSEEP+K SRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
IDGMKM+AEYKA KKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPKYA 240
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPLPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NL+RTSAWHSE+E+GFITPGDT VRIE GSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGXLLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKNDVK+LIKLAQ+KQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 841 EGLIDTAVKT 850
>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
subsp. malaccensis]
Length = 1832
Score = 1570 bits (4064), Expect = 0.0
Identities = 780/850 (91%), Positives = 799/850 (94%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD RFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQ+EHGETMERGKPK GLSDPRLGTI
Sbjct: 1 MDTRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPAGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEED R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDTR 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK ALKIRNPKNRLKRIYDACKSKKKC+GG DSEEP+K SRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCSGGDDIDVQGQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
IDGMKMVAEYKA KKKSD+ EQLPEP ERKQ LSAERVLSVLKRISDEDCLLLGL+PKYA
Sbjct: 181 IDGMKMVAEYKAPKKKSDEQEQLPEPAERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 240
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGH+IKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLCDGDFVLFNRQPSLHKMSIMGHKIKIMPYS 480
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NL+R SAWHSESE+GFITPGDT VRIE GSLIHVIWEEVGPDA
Sbjct: 601 NLIRFSAWHSESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQ+KQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQEKQ 720
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LE EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 841 EGLIDTAVKT 850
>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 1566 bits (4054), Expect = 0.0
Identities = 777/850 (91%), Positives = 798/850 (93%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDVRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK ALKIRNPK+RLKRI DACKSKKKCAGG DSEEP+K SRGGCG+QQP IT
Sbjct: 121 FKQALKIRNPKHRLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTIT 180
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
IDGMKMVAEYKA KKKSDD +QLPEPVERKQ LSA+RVLSVLKRISDEDC+LLGL+P+YA
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQDQLPEPVERKQILSADRVLSVLKRISDEDCILLGLNPQYA 240
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIE DVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEMDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NL+RTSAWHSE+E+GFITPGDT VRIE GSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQN FS+GIGDTIADA TMEKINETISKAKNDVK+LIKLAQ+KQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSMGIGDTIADAVTMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 841 EGLIDTAVKT 850
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 1558 bits (4035), Expect = 0.0
Identities = 771/850 (90%), Positives = 796/850 (93%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK A KIRNPKNRLK+I DACK+K KC GG S+EPVK SRGGCGAQQP +T
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALD-SDEPVKKSRGGCGAQQPKLT 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
I+GMKM+AEYK +KK+DDPEQLPEPVERKQQLSAERVL+VLKRISDEDC+LLGL+PKYA
Sbjct: 180 IEGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NLLRTSAWHSESE+GFITPGDTQVRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKN+VK+LI+ AQ++Q
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQ 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
[Gossypium raimondii]
Length = 1832
Score = 1545 bits (4000), Expect = 0.0
Identities = 764/850 (89%), Positives = 792/850 (93%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPK+GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK ALKI+NPKNRLK+I DACK+K KC GG +EEPVK SRGGCGAQQP +T
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQD-AEEPVKKSRGGCGAQQPKLT 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
IDGMKM+AEYKA +KK+DDPEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+PKYA
Sbjct: 180 IDGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTH LAMIIRHNENLRRQERNG+PAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NLLRTSAWHSESE+G ITPGDTQVRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISKAK+DVK LI AQ+K
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKD 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LEPEPGRTMMESFENKVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
Length = 1809
Score = 1545 bits (4000), Expect = 0.0
Identities = 764/850 (89%), Positives = 792/850 (93%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPK+GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK ALKI+NPKNRLK+I DACK+K KC GG +EEPVK SRGGCGAQQP +T
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQD-AEEPVKKSRGGCGAQQPKLT 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
IDGMKM+AEYKA +KK+DDPEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+PKYA
Sbjct: 180 IDGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTH LAMIIRHNENLRRQERNG+PAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NLLRTSAWHSESE+G ITPGDTQVRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISKAK+DVK LI AQ+K
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKD 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LEPEPGRTMMESFENKVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|823191464|ref|XP_012491468.1|
PREDICTED: DNA-directed RNA polymerase II subunit 1
isoform X1 [Gossypium raimondii]
gi|823191467|ref|XP_012491470.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 isoform X1 [Gossypium
raimondii] gi|823191470|ref|XP_012491471.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|763776132|gb|KJB43255.1|
hypothetical protein B456_007G190500 [Gossypium
raimondii] gi|763776133|gb|KJB43256.1| hypothetical
protein B456_007G190500 [Gossypium raimondii]
gi|763776135|gb|KJB43258.1| hypothetical protein
B456_007G190500 [Gossypium raimondii]
Length = 1846
Score = 1545 bits (4000), Expect = 0.0
Identities = 764/850 (89%), Positives = 792/850 (93%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPK+GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK ALKI+NPKNRLK+I DACK+K KC GG +EEPVK SRGGCGAQQP +T
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQD-AEEPVKKSRGGCGAQQPKLT 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
IDGMKM+AEYKA +KK+DDPEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+PKYA
Sbjct: 180 IDGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTH LAMIIRHNENLRRQERNG+PAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NLLRTSAWHSESE+G ITPGDTQVRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISKAK+DVK LI AQ+K
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKD 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LEPEPGRTMMESFENKVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Sesamum indicum]
Length = 1848
Score = 1536 bits (3978), Expect = 0.0
Identities = 757/850 (89%), Positives = 790/850 (92%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD+RFPYSPAEVAK+R VQFGILSPDEIRQMSVV +EH ET ERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETC ANMA+CPGHFGHLELAKPMFHIGFMKTVL+I+RCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCMANMADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK AL+IRNPKNRLK+I DACK+K KC GG ++EPVK +RGGCGAQQP I+
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDVQGQD-TDEPVKKTRGGCGAQQPKIS 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
IDGMKMVAEYK KKK+DDPEQ+PEPVERKQQLSAE+VLS+LKRI+DEDC LLGL+PKYA
Sbjct: 180 IDGMKMVAEYKIQKKKNDDPEQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKYA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
R+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH+IKIMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NLLR SAWH ESE GFITPGDTQVRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETIS AKN+VK+LI+ AQ+KQ
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQ 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|590702285|ref|XP_007046586.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
Length = 1861
Score = 1535 bits (3975), Expect = 0.0
Identities = 757/850 (89%), Positives = 791/850 (93%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPK+GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEE+ +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK ALKI+NPKNRLK+I DACK+K KC GG +EEPVK SRGGCGAQQP ++
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQD-TEEPVKKSRGGCGAQQPKLS 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
IDGMKM+AEYK +K++DD EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+PK+A
Sbjct: 180 IDGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTH LAMIIRHNENLRRQERNG+PAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NLLR SAWHSE+E+GFITPGDTQVRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAK +VK+LI AQ+K
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKD 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LEPEPGRTMMESFENKVNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Eucalyptus
grandis] gi|629090320|gb|KCW56573.1| hypothetical protein
EUGRSUZ_I02304 [Eucalyptus grandis]
Length = 1852
Score = 1535 bits (3974), Expect = 0.0
Identities = 758/850 (89%), Positives = 790/850 (92%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKI GLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRKLKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DE+D +
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILTDEDDHK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK AL+IRNPKNRLK+I DACK+K KC GG SEEP K + GGCGAQQP +T
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCDGGDDVDTKGQG-SEEPKKKNHGGCGAQQPKLT 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
I+GMKM+AEYKA +KK+DD +Q+PEPVERKQ LSAERVLSVLKRISDE C LLGL+PKYA
Sbjct: 180 IEGMKMIAEYKAQRKKNDDQDQIPEPVERKQTLSAERVLSVLKRISDEHCQLLGLNPKYA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRQQERNGAPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMN+LMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNVLMWWEDFDGKVPTPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NLLR SAWHSE+E+GFITPGDTQVRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AK++VK LIK AQ+K+
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISSAKDEVKRLIKDAQEKK 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIP+GFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 1535 bits (3973), Expect = 0.0
Identities = 759/850 (89%), Positives = 788/850 (92%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD RFPYSPAEV+KVR VQFGILSPD IRQMSVVQ+EH ET E+GKPK GGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK A +IRNPKNRLK++ DACK+K KC GG E P+K RGGCGAQQP +T
Sbjct: 121 FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGE-PIKKRRGGCGAQQPKLT 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
I+GMKM+AEYKA +KK+DD EQLPEPVERKQQLSAERVLSVLKRISDEDC+LLGL+P+YA
Sbjct: 180 IEGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NL+RTSAWHSESE+GFITPGDTQVRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKN+VK+LI+ AQ++Q
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQ 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Setaria italica]
Length = 1852
Score = 1535 bits (3973), Expect = 0.0
Identities = 761/850 (89%), Positives = 789/850 (92%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSV+Q+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETC A MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61 DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK ALKIRNPKNRLKRIYDACKSKK CAGG D++EPVK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVK-KRGGCGAQQPNIT 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
+DGMKMVAE+KA KKK+DD +QLPEPVERKQ LSAERVL+VLKRISDEDCLLLGL+PK+A
Sbjct: 180 VDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
REDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDT IEKDVFMN LMWW+DFDGKIPAPAILKPRP+WTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTLIEKDVFMNTLMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NL+R SAWHSE+E+GFITPGDT VRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLIRFSAWHSETETGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQ FSIGIGDTIADAATMEKINETISKAKN+VK+LIK AQDK
Sbjct: 660 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISKAKNEVKELIKQAQDKH 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
brachyantha]
Length = 1855
Score = 1534 bits (3972), Expect = 0.0
Identities = 762/850 (89%), Positives = 788/850 (92%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETC A MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61 DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK ALKIRNPKNRLKRIYDACKSKK CAGG D++EPVK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKR-RGGCGAQQPNIT 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
+DGMKMVAE+KA KKK+DD EQLPEPVERKQ LSAERVL+VLKRISDEDCLLLGL+PK+A
Sbjct: 180 VDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
REDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDT IEKDVFMNILMWWEDFDGK+PAPAILKPRP+WTGKQVFNLIIPK I
Sbjct: 540 TLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NL+R SAWHSE+E+GFITPGDT VRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKN+VK+LIK A DK
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISTAKNEVKELIKQAHDKH 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
[Populus trichocarpa] gi|550338614|gb|ERP60834.1|
DNA-directed RNA polymerase II largest subunit family
protein [Populus trichocarpa]
Length = 1837
Score = 1531 bits (3964), Expect = 0.0
Identities = 756/850 (88%), Positives = 787/850 (92%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD RFPYSPAEVAKVR VQFGILSPDEIRQMSV+Q+EH ET ERGKPK GGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK ALKI+NPK+RLK+I DACK+K KC GG +EEPVK SRGGCGAQQP +T
Sbjct: 121 FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQD-NEEPVKKSRGGCGAQQPKLT 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
I+GMKM+AEYK +KKSDD EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL PKYA
Sbjct: 180 IEGMKMIAEYKVQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQER+GAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP I+KPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NL+RT+AWH +SE G ITPGDT VRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLIRTAAWHMDSERGMITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETIS AKN+VKDLI+ AQ+K+
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKNEVKDLIRKAQNKE 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_011022252.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Populus
euphratica]
Length = 1837
Score = 1530 bits (3961), Expect = 0.0
Identities = 755/850 (88%), Positives = 787/850 (92%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD RFPYSPAEVAKVR VQFGILSPDEIRQMSV+Q+EH ET ERGKPK GGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK ALKI+NPK+RLK+I DACK+K KC GG +EEPVK SRGGCGAQQP +T
Sbjct: 121 FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQD-NEEPVKKSRGGCGAQQPKLT 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
I+GMKM+AEYK +KK+DD EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL PKYA
Sbjct: 180 IEGMKMIAEYKVQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQER+GAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP I+KPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NL+RT+AWH +SE G ITPGDT VRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLIRTAAWHMDSERGMITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETIS AKN+VKDLI+ AQ+K+
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKNEVKDLIRKAQNKE 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Erythranthe
guttatus] gi|604343422|gb|EYU42342.1| hypothetical
protein MIMGU_mgv1a000091mg [Erythranthe guttata]
Length = 1842
Score = 1527 bits (3953), Expect = 0.0
Identities = 751/850 (88%), Positives = 789/850 (92%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVV +EH ET ERGKPKIGGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMK VL+I+RCVCFNCSKILADEE+ +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK A++IRNPKNRL++I DACK+K KC GG +EEPVK SRGGCGAQQP I+
Sbjct: 121 FKQAMRIRNPKNRLRKILDACKNKTKCDGGDEIDGHSQD-TEEPVKKSRGGCGAQQPKIS 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
IDGMKMVAEYK KKKSDD +Q+PEPVERKQQLSAE+VLS+LKRI+DEDC LLGL+PK+A
Sbjct: 180 IDGMKMVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTSARSEDDLTHQLAMIIRHNENL+RQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
R+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NLLR SAWH E+E GFITPGDTQVRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLLRYSAWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQNAFS+GIGDTIADAATMEKINETIS AKN+VK+LI+ AQ+KQ
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQ 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LEPEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIP+GF+ RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849
>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Fragaria vesca
subsp. vesca] gi|764511805|ref|XP_011461993.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1 [Fragaria vesca
subsp. vesca]
Length = 1842
Score = 1526 bits (3951), Expect = 0.0
Identities = 756/850 (88%), Positives = 785/850 (92%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD+RFP+SP EVAKVR VQFGILSPDEIRQMSVVQ+EH ETM GKPK GLSDPRLGTI
Sbjct: 1 MDIRFPFSPCEVAKVRRVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL DE+D +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK AL+I+NPKNRLK+I DACK+K KC GG ++EP+K SRGGCGAQQP +T
Sbjct: 121 FKTALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQD---TDEPLKKSRGGCGAQQPKLT 177
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
IDGMKMVAEYKA +KKSDD EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+PKYA
Sbjct: 178 IDGMKMVAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 237
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNG+PAHII
Sbjct: 238 RPDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHII 297
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 298 SEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 357
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 358 RTVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 417
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 418 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 477
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 478 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 537
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 538 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 597
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NL RTSAWHSESE+G ITPGDT VRIE GSLIHVIWEEVGPDA
Sbjct: 598 NLQRTSAWHSESETGNITPGDTHVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDA 657
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN+VK+LI AQ K
Sbjct: 658 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKELISKAQSKS 717
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LEPEPGRTMM+SFENKVNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 718 LEPEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 777
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 778 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 837
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 838 EGLIDTAVKT 847
>ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Cucumis sativus]
gi|778674691|ref|XP_011650276.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 [Cucumis sativus]
gi|700200498|gb|KGN55631.1| hypothetical protein
Csa_3G002510 [Cucumis sativus]
Length = 1867
Score = 1526 bits (3950), Expect = 0.0
Identities = 754/850 (88%), Positives = 786/850 (92%)
Frame = -2
Query: 2550 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKIGGLSDPRLGTI 2371
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPK+ GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 2370 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 2191
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL IMR VCFNCSKIL DEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 2190 FKMALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXDSEEPVKTSRGGCGAQQPNIT 2011
FK AL+I+NPKNRL++I DACK+K KC GG S++PVK SRGGCGAQQP I+
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQD-SDQPVKKSRGGCGAQQPKIS 179
Query: 2010 IDGMKMVAEYKASKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLSPKYA 1831
I+GMKM AEYKA +KK+DDPEQLPEPVERKQ L+AERVL +LKRI+DEDC LLGL+PKYA
Sbjct: 180 IEGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYA 239
Query: 1830 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 1651
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNG+PAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHII 299
Query: 1650 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1471
+EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1470 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1291
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1290 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1111
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1110 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 931
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 930 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 751
TLLGCRKITKRDTFI KDVFMN LMWWEDFDGKIPAPAILKP+PLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQI 599
Query: 750 NLLRTSAWHSESESGFITPGDTQVRIEXXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 571
NL RTSAWHSESE+G ITPGDT VRIE GSLIHVIWEEVGPDA
Sbjct: 600 NLTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDA 659
Query: 570 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 391
ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETIS AKN+VK+LIK AQ++
Sbjct: 660 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERS 719
Query: 390 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 211
LEPEPGRTMM+SFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 210 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 31
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 30 EGLIDTAVKT 1
EGLIDTAVKT
Sbjct: 840 EGLIDTAVKT 849