BLASTX nr result
ID: Alisma22_contig00011233
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00011233
(858 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ... 165 3e-44
5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 164 5e-44
5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 164 9e-44
KMZ71237.1 hypothetical protein ZOSMA_185G00560 [Zostera marina] 167 1e-43
5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 162 3e-43
JAT62688.1 Pentatricopeptide repeat-containing protein At4g28010... 156 8e-40
XP_006858934.1 PREDICTED: pentatricopeptide repeat-containing pr... 155 1e-39
ERM96976.1 hypothetical protein AMTR_s00074p00175610 [Amborella ... 149 8e-39
CDY68929.1 BnaA08g31580D [Brassica napus] 152 1e-38
XP_009110633.1 PREDICTED: pentatricopeptide repeat-containing pr... 152 1e-38
XP_013677859.1 PREDICTED: pentatricopeptide repeat-containing pr... 152 2e-38
XP_009110632.1 PREDICTED: pentatricopeptide repeat-containing pr... 152 2e-38
XP_006829560.2 PREDICTED: pentatricopeptide repeat-containing pr... 147 3e-38
XP_006417205.1 hypothetical protein EUTSA_v10007048mg [Eutrema s... 151 4e-38
4PJR_A Chain A, Crystal Structure Of Designed Cppr-nre Protein 145 5e-38
JAU07964.1 Pentatricopeptide repeat-containing protein, partial ... 150 6e-38
NP_001031033.1 Pentatricopeptide repeat (PPR) superfamily protei... 150 1e-37
4WSL_A Chain A, Crystal Structure Of Designed Cppr-polyc Protein 144 1e-37
XP_006418847.1 hypothetical protein EUTSA_v10002441mg [Eutrema s... 149 2e-37
XP_006417216.1 hypothetical protein EUTSA_v10007095mg [Eutrema s... 148 4e-37
>5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
Length = 460
Score = 165 bits (417), Expect = 3e-44
Identities = 96/254 (37%), Positives = 141/254 (55%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 116 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 175
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 176 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDG 235
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I S++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 236 LCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 295
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G +DE LK+ + + VTY+ +I+ L KAG+ EA++L
Sbjct: 296 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 355
Query: 43 DMEVQGIHPDVVTY 2
+M +GI PDVVTY
Sbjct: 356 EMVEKGIKPDVVTY 369
Score = 160 bits (404), Expect = 3e-42
Identities = 93/254 (36%), Positives = 139/254 (54%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 151 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 210
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 211 LKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDG 270
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 271 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 330
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDNS--SNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G +DE LK+ + + VTY+ +I+ L KAG+ EA++L
Sbjct: 331 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 390
Query: 43 DMEVQGIHPDVVTY 2
+M +GI PD +TY
Sbjct: 391 EMVEKGIKPDELTY 404
Score = 150 bits (379), Expect = 1e-38
Identities = 84/219 (38%), Positives = 125/219 (57%), Gaps = 11/219 (5%)
Frame = -3
Query: 625 GFRVDTTVTNSLLPGLPKSRQH---------LENLSVTPHFTSYNLAILGLCLEGKLLAA 473
G R+D ++L L ++ ++ L V P +YN I GLC GKL A
Sbjct: 11 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEA 70
Query: 472 MDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDG 293
+ L EMV G +++TY LI LCK+GK+ EA+ L + M EK I ++TY+ LIDG
Sbjct: 71 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Query: 292 LCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDN--SSN 119
LC+ +++E L +M ++GI PD VTYN LI+ ++G +DE LK+ + +
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 118 AVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
VTY+ +I+ L KAG+ EA++L +M +GI P VVTY
Sbjct: 191 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTY 229
Score = 135 bits (339), Expect = 6e-33
Identities = 82/242 (33%), Positives = 126/242 (52%), Gaps = 11/242 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + N+L+ GL K+ + E
Sbjct: 186 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEA 245
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 246 LKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 305
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 306 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 365
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G +DE LK+ + + +TY V+ + +A R+ EA L
Sbjct: 366 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLS 425
Query: 43 DM 38
++
Sbjct: 426 EV 427
Score = 117 bits (294), Expect = 1e-26
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G PS T + ++ + K D AL M + G + N+L+ GL K+ + E
Sbjct: 221 GIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEA 280
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 281 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 340
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 341 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 400
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHD 131
+TY ++ + R+ +E L+ +
Sbjct: 401 ELTYRRVVESYCRAKRFEEARGFLSEVSE 429
Score = 92.4 bits (228), Expect = 1e-17
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 9/181 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G PS T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 256 GIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 315
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 316 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 375
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I +TY +++ CR R EE L+++ + + D
Sbjct: 376 LCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
Query: 217 R 215
+
Sbjct: 436 K 436
>5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U10 In Complex With Its Target Rna U10
Length = 460
Score = 164 bits (416), Expect = 5e-44
Identities = 95/254 (37%), Positives = 141/254 (55%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P+ T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 46 GVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 105
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 106 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 165
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 166 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 225
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G +DE LK+ + + VTY+ +I+ L KAG+ EA++L
Sbjct: 226 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 285
Query: 43 DMEVQGIHPDVVTY 2
+M +GI PDVVTY
Sbjct: 286 EMVEKGIKPDVVTY 299
Score = 163 bits (413), Expect = 1e-43
Identities = 95/254 (37%), Positives = 140/254 (55%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 116 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 175
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 176 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 235
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 236 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 295
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G +DE LK+ + + VTY+ +I+ L KAG+ EA++L
Sbjct: 296 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 355
Query: 43 DMEVQGIHPDVVTY 2
+M +GI PDVVTY
Sbjct: 356 EMVEKGIKPDVVTY 369
Score = 160 bits (404), Expect = 3e-42
Identities = 93/254 (36%), Positives = 139/254 (54%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 151 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 210
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 211 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 270
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 271 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 330
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDNS--SNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G +DE LK+ + + VTY+ +I+ L KAG+ EA++L
Sbjct: 331 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 390
Query: 43 DMEVQGIHPDVVTY 2
+M +GI PD +TY
Sbjct: 391 EMVEKGIKPDELTY 404
Score = 152 bits (385), Expect = 2e-39
Identities = 85/219 (38%), Positives = 126/219 (57%), Gaps = 11/219 (5%)
Frame = -3
Query: 625 GFRVDTTVTNSLLPGLPKSRQH---------LENLSVTPHFTSYNLAILGLCLEGKLLAA 473
G R+D ++L L ++ ++ L V P +YN I GLC GKL A
Sbjct: 11 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEA 70
Query: 472 MDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDG 293
+ L EMV G +++TY LI LCK+GK+ EA+ L + M EK I ++TY+ LIDG
Sbjct: 71 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Query: 292 LCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDN--SSN 119
LC+ +++E L +M ++GI PD VTYN LI+ ++G +DE LK+ + +
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 118 AVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
VTY+ +I+ L KAG+ EA++L +M +GI PDVVTY
Sbjct: 191 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 229
Score = 137 bits (345), Expect = 8e-34
Identities = 83/242 (34%), Positives = 127/242 (52%), Gaps = 11/242 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 186 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 245
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 246 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 305
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 306 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 365
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G +DE LK+ + + +TY V+ + +A R+ EA L
Sbjct: 366 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLS 425
Query: 43 DM 38
++
Sbjct: 426 EV 427
Score = 118 bits (296), Expect = 7e-27
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 221 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 280
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 281 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 340
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 341 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 400
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHD 131
+TY ++ + R+ +E L+ +
Sbjct: 401 ELTYRRVVESYCRAKRFEEARGFLSEVSE 429
Score = 90.9 bits (224), Expect = 5e-17
Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 9/181 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 256 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 315
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 316 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 375
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I +TY +++ CR R EE L+++ + + D
Sbjct: 376 LCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
Query: 217 R 215
+
Sbjct: 436 K 436
>5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
Length = 460
Score = 164 bits (414), Expect = 9e-44
Identities = 95/254 (37%), Positives = 141/254 (55%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P+ T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 46 GVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 105
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 106 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 165
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TYS LIDGLC+ +++E L +M ++GI P+
Sbjct: 166 LCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPN 225
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLH 44
VTY+ LI+ ++G +DE LK+ + N VTY+ +I+ L KAG+ EA++L
Sbjct: 226 VVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFE 285
Query: 43 DMEVQGIHPDVVTY 2
+M +GI PDVVTY
Sbjct: 286 EMVEKGIKPDVVTY 299
Score = 159 bits (401), Expect = 7e-42
Identities = 92/254 (36%), Positives = 140/254 (55%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D ++L+ GL K+ + E
Sbjct: 151 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEA 210
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P+ +Y+ I GLC GKL A+ L EMV G N++TY LI
Sbjct: 211 LKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDG 270
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 271 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 330
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G +DE LK+ + + VTY+ +I+ L KAG+ EA++L
Sbjct: 331 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 390
Query: 43 DMEVQGIHPDVVTY 2
+M +GI PD +TY
Sbjct: 391 EMVEKGIKPDELTY 404
Score = 152 bits (383), Expect = 3e-39
Identities = 85/219 (38%), Positives = 126/219 (57%), Gaps = 11/219 (5%)
Frame = -3
Query: 625 GFRVDTTVTNSLLPGLPKSRQH---------LENLSVTPHFTSYNLAILGLCLEGKLLAA 473
G R+D ++L L ++ ++ L V P +YN I GLC GKL A
Sbjct: 11 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEA 70
Query: 472 MDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDG 293
+ L EMV G +++TY LI LCK+GK+ EA+ L + M EK I ++TY+ LIDG
Sbjct: 71 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Query: 292 LCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDN--SSN 119
LC+ +++E L +M ++GI PD VTYN LI+ ++G +DE LK+ + +
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 118 AVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
VTYS +I+ L KAG+ EA++L +M +GI P+VVTY
Sbjct: 191 VVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTY 229
Score = 117 bits (293), Expect = 2e-26
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 9/209 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P+ T + ++ + K D AL M + G + + N+L+ GL K+ + E
Sbjct: 221 GIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEA 280
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 281 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 340
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 341 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 400
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHD 131
+TY ++ + R+ +E L+ +
Sbjct: 401 ELTYRRVVESYCRAKRFEEARGFLSEVSE 429
Score = 91.3 bits (225), Expect = 4e-17
Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 9/181 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P+ T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 256 GIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 315
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 316 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 375
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I +TY +++ CR R EE L+++ + + D
Sbjct: 376 LCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
Query: 217 R 215
+
Sbjct: 436 K 436
>KMZ71237.1 hypothetical protein ZOSMA_185G00560 [Zostera marina]
Length = 709
Score = 167 bits (423), Expect = 1e-43
Identities = 98/282 (34%), Positives = 153/282 (54%), Gaps = 13/282 (4%)
Frame = -3
Query: 808 YSRVSKVTECKDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQK 629
++++ + + + S+IS + G LP++ T++S M SF R+ +AL V M K
Sbjct: 58 WTKICDLLKSGNQSSAISSYRRMTHLGFLPNYRTMMSLMRSFLRSENPISALAIVGTMYK 117
Query: 628 LGFRVDTTVTNSLLPGLPKSRQHLENLS-----------VTPHFTSYNLAILGLCLEGKL 482
G+ VDT + N L+ GL K H N++ ++P +YN I GLC EGK+
Sbjct: 118 GGYSVDTLLINILIKGLCKC--HHVNIALGLFNGLGVDWISPDVITYNTLIDGLCKEGKV 175
Query: 481 LAAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSIL 302
AMDL M NN I+TY +LI LCK KV+EA+IL K M+ +N ++ YS +
Sbjct: 176 SQAMDLWNVMENNACVPTIVTYNSLIDHLCKDHKVEEALILFKNMERNGLNPDVVIYSTV 235
Query: 301 IDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNR--THDN 128
I GLC + I+EG LL M K G+ P+ +TY LI+ + G E +K+L H+
Sbjct: 236 IRGLCLVGNIDEGLNLLKMMKKNGVSPNVITYTTLIDGLGKIGQWKEAMKMLREMGDHNI 295
Query: 127 SSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+ + Y+ +I+ L K + +A+E+ H M +G P ++TY
Sbjct: 296 QPDVINYTMLIDRLCKDEKTNKAVEVFHMMIDKGNKPTMITY 337
Score = 101 bits (251), Expect = 2e-20
Identities = 78/310 (25%), Positives = 134/310 (43%), Gaps = 50/310 (16%)
Frame = -3
Query: 781 CKDNDSSISEHLSTNM--SGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDT 608
CKD ++ + + M G P+ T +N + A+ + M + G D
Sbjct: 310 CKDEKTNKAVEVFHMMIDKGNKPTMITYNVLINGLCKKGLVKDAMNQIHKMIEKGTNPDV 369
Query: 607 TVTNSLLPGLPKSRQHLENL-----------SVTPHFTSYNLAILGLCLEGKLLAAMDLL 461
N L+ L +S + L SV P +++ I+GLCL +++ A+D+
Sbjct: 370 VTFNILIRTLFESHHITDALDLFDKMLMGKYSVKPDTWTFSTVIIGLCLNNRVVQALDVF 429
Query: 460 REMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRI 281
+ M N G A++LTY LI L K KV A K M + + + T +I+I+GLC++
Sbjct: 430 KNMANRGLPASVLTYNTLIEGLIKIHKVDMAFSFRKQMIDISLKPNSFTDTIIINGLCKL 489
Query: 280 SRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDN--------- 128
R+++ + +M I P YN L+ A R +I++ + +L++ D+
Sbjct: 490 RRVDDAERYILQMKSRKIIPTIYDYNTLLEALCRKQDIEKIVWLLSQMEDDKIRLNLISF 549
Query: 127 ----------------------------SSNAVTYSCVINALLKAGRWIEAIELLHDMEV 32
S + +TYS +I+ + GR EA +L M
Sbjct: 550 NTLMCGMCRSGEIGTAKGVLLCLLKMGFSPDRITYSILIDGCFRQGRSDEAKDLFSKMIA 609
Query: 31 QGIHPDVVTY 2
+G++ DVVTY
Sbjct: 610 EGLYADVVTY 619
Score = 87.0 bits (214), Expect = 1e-15
Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 11/247 (4%)
Frame = -3
Query: 718 SFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKS---------R 566
+FST++ + N+ AL M G N+L+ GL K R
Sbjct: 408 TFSTVIIGL---CLNNRVVQALDVFKNMANRGLPASVLTYNTLIEGLIKIHKVDMAFSFR 464
Query: 565 QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKS 386
+ + ++S+ P+ + + I GLC ++ A + +M + I Y L+ LC+
Sbjct: 465 KQMIDISLKPNSFTDTIIINGLCKLRRVDDAERYILQMKSRKIIPTIYDYNTLLEALCRK 524
Query: 385 GKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTY 206
+++ + L+ M++ I ++I+++ L+ G+CR I +L + K G PDR+TY
Sbjct: 525 QDIEKIVWLLSQMEDDKIRLNLISFNTLMCGMCRSGEIGTAKGVLLCLLKMGFSPDRITY 584
Query: 205 NILINACTRSGNIDEGLKVLNR--THDNSSNAVTYSCVINALLKAGRWIEAIELLHDMEV 32
+ILI+ C R G DE + ++ ++ VTY+ ++ L+ AG E + +L M
Sbjct: 585 SILIDGCFRQGRSDEAKDLFSKMIAEGLYADVVTYNMMLRGLINAGDSSEVVVMLRKMAS 644
Query: 31 QGIHPDV 11
+ + D+
Sbjct: 645 ENLILDM 651
>5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
Length = 460
Score = 162 bits (411), Expect = 3e-43
Identities = 95/254 (37%), Positives = 140/254 (55%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 81 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 140
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 141 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDG 200
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 201 LCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 260
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G +DE LK+ + + VTY+ +I+ L KAG+ EA++L
Sbjct: 261 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 320
Query: 43 DMEVQGIHPDVVTY 2
+M +GI PDVVTY
Sbjct: 321 EMVEKGIKPDVVTY 334
Score = 160 bits (405), Expect = 2e-42
Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 116 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 175
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +Y I GLC GKL A+ L EMV G +++TY LI
Sbjct: 176 LKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDG 235
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 236 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 295
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDNS--SNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G +DE LK+ + + VTY+ +I+ L KAG+ EA++L
Sbjct: 296 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 355
Query: 43 DMEVQGIHPDVVTY 2
+M +GI PDVVTY
Sbjct: 356 EMVEKGIKPDVVTY 369
Score = 155 bits (392), Expect = 1e-40
Identities = 91/254 (35%), Positives = 137/254 (53%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D +L+ GL K+ + E
Sbjct: 151 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEA 210
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +Y I GLC GKL A+ L EMV G +++TY LI
Sbjct: 211 LKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 270
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 271 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 330
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDNS--SNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G +DE LK+ + + VTY+ +I+ L KAG+ EA++L
Sbjct: 331 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 390
Query: 43 DMEVQGIHPDVVTY 2
+M +GI PD +TY
Sbjct: 391 EMVEKGIKPDELTY 404
Score = 152 bits (385), Expect = 2e-39
Identities = 85/219 (38%), Positives = 126/219 (57%), Gaps = 11/219 (5%)
Frame = -3
Query: 625 GFRVDTTVTNSLLPGLPKSRQH---------LENLSVTPHFTSYNLAILGLCLEGKLLAA 473
G R+D ++L L ++ ++ L V P +YN I GLC GKL A
Sbjct: 11 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEA 70
Query: 472 MDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDG 293
+ L EMV G +++TY LI LCK+GK+ EA+ L + M EK I ++TY+ LIDG
Sbjct: 71 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Query: 292 LCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDN--SSN 119
LC+ +++E L +M ++GI PD VTYN LI+ ++G +DE LK+ + +
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 118 AVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
VTY+ +I+ L KAG+ EA++L +M +GI PDVVTY
Sbjct: 191 VVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 229
Score = 135 bits (341), Expect = 3e-33
Identities = 82/242 (33%), Positives = 126/242 (52%), Gaps = 11/242 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D +L+ GL K+ + E
Sbjct: 186 GIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEA 245
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 246 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 305
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 306 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 365
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G +DE LK+ + + +TY V+ + +A R+ EA L
Sbjct: 366 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLS 425
Query: 43 DM 38
++
Sbjct: 426 EV 427
Score = 119 bits (298), Expect = 4e-27
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 221 GIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 280
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 281 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 340
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I ++TY+ LIDGLC+ +++E L +M ++GI PD
Sbjct: 341 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 400
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHD 131
+TY ++ + R+ +E L+ +
Sbjct: 401 ELTYRRVVESYCRAKRFEEARGFLSEVSE 429
Score = 90.9 bits (224), Expect = 5e-17
Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 9/181 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T + ++ + K D AL M + G + D N+L+ GL K+ + E
Sbjct: 256 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 315
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L + P +YN I GLC GKL A+ L EMV G +++TY LI
Sbjct: 316 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 375
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK+GK+ EA+ L + M EK I +TY +++ CR R EE L+++ + + D
Sbjct: 376 LCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
Query: 217 R 215
+
Sbjct: 436 K 436
>JAT62688.1 Pentatricopeptide repeat-containing protein At4g28010 [Anthurium
amnicola]
Length = 688
Score = 156 bits (395), Expect = 8e-40
Identities = 96/280 (34%), Positives = 148/280 (52%), Gaps = 12/280 (4%)
Frame = -3
Query: 805 SRVSKVTECKDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKL 626
SRV + + D+ S++S + S G LP L+S M S + ALG V + K
Sbjct: 65 SRVCSLAKSGDHGSALSAYRSMTQMGILPKHPALVSLMGSLFHLREPGPALGVVGLLVKR 124
Query: 625 GFRVDTTVTNSLLPGLPKSRQHLENL----------SVTPHFTSYNLAILGLCLEGKLLA 476
G+ ++T + N LL GL +SR L S+ P +YN I GLC E L
Sbjct: 125 GYALNTFLLNLLLKGLCRSRCVARALEMFRCVTQRKSIAPDVITYNTLISGLCKERNLEE 184
Query: 475 AMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILID 296
AM+L EM ++TY L+ LCKSG+++EA+ L+ M EK ++A +I YS LI
Sbjct: 185 AMELWEEMAGRDCCPTVVTYTCLVDGLCKSGRIEEAVALLDQMKEKGLDADVIIYSALIS 244
Query: 295 GLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDNS--S 122
GLC +++EG L ++M ++GI P+ VTY L++ R DE +++L +
Sbjct: 245 GLCNEGKVDEGVELFSEMSEKGILPNVVTYTCLVHGLCRLRRWDEAMEMLKSMGERGIHP 304
Query: 121 NAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+ TY+ +I+ L K G+ A+++L M +G P+ VTY
Sbjct: 305 DVHTYTVLIDGLCKDGKVKRALKMLSLMSEKGEDPNTVTY 344
Score = 125 bits (315), Expect = 7e-29
Identities = 78/274 (28%), Positives = 137/274 (50%), Gaps = 14/274 (5%)
Frame = -3
Query: 781 CKDNDSSISEHLSTNMSGT--LPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDT 608
CK+ + + L M+G P+ T ++ ++ + + A+ + M++ G D
Sbjct: 177 CKERNLEEAMELWEEMAGRDCCPTVVTYTCLVDGLCKSGRIEEAVALLDQMKEKGLDADV 236
Query: 607 TVTNSLLPGLPKSRQ---------HLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLRE 455
+ ++L+ GL + + + P+ +Y + GLC + AM++L+
Sbjct: 237 IIYSALISGLCNEGKVDEGVELFSEMSEKGILPNVVTYTCLVHGLCRLRRWDEAMEMLKS 296
Query: 454 MVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISR 275
M G ++ TY LI LCK GKVK A+ ++ M EK + + +TY+++I+GLC+
Sbjct: 297 MGERGIHPDVHTYTVLIDGLCKDGKVKRALKMLSLMSEKGEDPNTVTYNVMINGLCKNGL 356
Query: 274 IEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDNSS---NAVTYS 104
+ +G+ LL KM + G PD VTYN +I S +DE +++ + + +S N +T
Sbjct: 357 VSDGYELLKKMVEIGKSPDIVTYNTMIRGLCDSQRVDEAMELFEKVLEGNSVELNTMTSG 416
Query: 103 CVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+IN L R EA+ L M +GI D+VTY
Sbjct: 417 TIINGLCNGKRVDEALHLYQTMLDRGIIGDLVTY 450
Score = 94.0 bits (232), Expect = 6e-18
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 11/259 (4%)
Frame = -3
Query: 757 SEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGL 578
S L+T SGT+ +N + D AL M G D N+L+ GL
Sbjct: 407 SVELNTMTSGTI---------INGLCNGKRVDEALHLYQTMLDRGIIGDLVTYNTLIDGL 457
Query: 577 PKS---------RQHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANI 425
K+ R+ + ++ + P + N+ I GL G+ A + ++ +G +
Sbjct: 458 LKTHNVDKAMQLREEMISMRLRPDSMTNNIIIDGLSKMGRAEDAENYFNQIKVDGITPTL 517
Query: 424 LTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTK 245
Y L++ +C+ K+++AM + M + I++Y+ LI G ++ +E LL +
Sbjct: 518 FQYNALLAVMCRKHKMEDAMRIFHNMKDSGCEPDIVSYNTLIAGASKVDDLEVVKALLVE 577
Query: 244 MHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDNS--SNAVTYSCVINALLKAGR 71
M G+ PD VTY+ LI++C + +E K+L N+ + V Y +++ G
Sbjct: 578 MVHRGLSPDPVTYSTLIHSCVKVKQFEEAKKLLEMMKANNIPVDVVVYDSLLHGFSVKGE 637
Query: 70 WIEAIELLHDMEVQGIHPD 14
E I LLH M G+ PD
Sbjct: 638 TSEIIGLLHQMAETGVVPD 656
Score = 80.1 bits (196), Expect = 3e-13
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 14/274 (5%)
Frame = -3
Query: 781 CKDNDSSISEHLSTNMS--GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDT 608
CKD + + + MS G P+ T +N + + M ++G D
Sbjct: 317 CKDGKVKRALKMLSLMSEKGEDPNTVTYNVMINGLCKNGLVSDGYELLKKMVEIGKSPDI 376
Query: 607 TVTNSLLPGLPKSRQH----------LENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLR 458
N+++ GL S++ LE SV + + I GLC ++ A+ L +
Sbjct: 377 VTYNTMIRGLCDSQRVDEAMELFEKVLEGNSVELNTMTSGTIINGLCNGKRVDEALHLYQ 436
Query: 457 EMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRIS 278
M++ G +++TY LI L K+ V +AM L + M + +T +I+IDGL ++
Sbjct: 437 TMLDRGIIGDLVTYNTLIDGLLKTHNVDKAMQLREEMISMRLRPDSMTNNIIIDGLSKMG 496
Query: 277 RIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYS 104
R E+ ++ +GI P YN L+ R +++ +++ + D+ + V+Y+
Sbjct: 497 RAEDAENYFNQIKVDGITPTLFQYNALLAVMCRKHKMEDAMRIFHNMKDSGCEPDIVSYN 556
Query: 103 CVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+I K LL +M +G+ PD VTY
Sbjct: 557 TLIAGASKVDDLEVVKALLVEMVHRGLSPDPVTY 590
>XP_006858934.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63330
[Amborella trichopoda] ERN20401.1 hypothetical protein
AMTR_s00068p00077860 [Amborella trichopoda]
Length = 665
Score = 155 bits (393), Expect = 1e-39
Identities = 90/265 (33%), Positives = 146/265 (55%), Gaps = 11/265 (4%)
Frame = -3
Query: 763 SISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLP 584
++S +++ +G P S L + + F + + ALG V + K+G+ + T+ ++
Sbjct: 14 ALSLYITIAQAGISPDISVLHTLVKCFCHVQRTNFALGVVGLILKMGYPLSVTLLTIVMR 73
Query: 583 GLPKSRQH---------LENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGA 431
GL K Q +EN ++ + SYN I GLC L A+ L +EM G
Sbjct: 74 GLCKEGQVARAMELLYVMENERLSVNAISYNTLINGLCKTKSLEDALALHKEMGRRGCHP 133
Query: 430 NILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLL 251
I TY LI LCK G+++EAM L++ M +N ++TY+ LI LC+++ +EE LL
Sbjct: 134 TIFTYNTLIDGLCKDGRIEEAMALLEEMCHYGLNPDVVTYTTLIHMLCKVNNVEEALELL 193
Query: 250 TKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKA 77
KM K G PD VTYN +++A ++ G I+ + +L+ H N +S+ VTY+ ++N L KA
Sbjct: 194 KKMGKMGCHPDIVTYNTIMDALSKEGRIEIAINLLDEMHHNGVNSDVVTYTSLMNMLFKA 253
Query: 76 GRWIEAIELLHDMEVQGIHPDVVTY 2
+ +A+ L ++ +G HPD VTY
Sbjct: 254 DKVEQALALCKEIRERGCHPDHVTY 278
Score = 123 bits (309), Expect = 4e-28
Identities = 82/248 (33%), Positives = 123/248 (49%), Gaps = 2/248 (0%)
Frame = -3
Query: 739 NMSGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQH 560
+ G P T S +N F R NK + AL ++K G +D + LL GL + +
Sbjct: 302 HQKGLNPDKITYNSIVNGFCRANKIEEALDLHRVIRKKGIFLDVGTYSVLLYGLIRIGRK 361
Query: 559 LENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKSGK 380
E + LE AM ++ G + +TY LI+ L K GK
Sbjct: 362 QE---------------ASILLEEIYHKAMRFCGQVGKTGCRLDTVTYTMLINSLSKRGK 406
Query: 379 VKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNI 200
+KEAM L+ M D+N ++TY+ LI+ L + + ++E ML +M K G D VTYN
Sbjct: 407 IKEAMALVDEMYNNDLNPDVVTYTTLINRLFKTNNLKEALMLCKEMAKRGCHLDIVTYNT 466
Query: 199 LINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLHDMEVQG 26
L + ++ G + E + +LN + N ++N +TY+ +IN L K A+EL DME +G
Sbjct: 467 LFDGLSKGGRLAEAMTLLNEMYSNGFNANVITYNTLINGLCKGNNVELALELCRDMEKRG 526
Query: 25 IHPDVVTY 2
HPD VTY
Sbjct: 527 CHPDNVTY 534
Score = 119 bits (297), Expect = 2e-26
Identities = 81/268 (30%), Positives = 132/268 (49%), Gaps = 2/268 (0%)
Frame = -3
Query: 799 VSKVTECKDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGF 620
+SK + K+ + + E + +++ + +++TL+ N +TN AL M K G
Sbjct: 401 LSKRGKIKEAMALVDEMYNNDLNPDVVTYTTLI---NRLFKTNNLKEALMLCKEMAKRGC 457
Query: 619 RVDTTVTNSLLPGLPKSRQHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNG 440
+D N+L GL K G+L AM LL EM +NG
Sbjct: 458 HLDIVTYNTLFDGLSKG--------------------------GRLAEAMTLLNEMYSNG 491
Query: 439 FGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGF 260
F AN++TY LI+ LCK V+ A+ L + M+++ + +TY+ LID L + R +
Sbjct: 492 FNANVITYNTLINGLCKGNNVELALELCRDMEKRGCHPDNVTYNTLIDCLSKYGRTNDIM 551
Query: 259 MLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDNSS--NAVTYSCVINAL 86
LL +M+ G+ PD VTY LIN ++ N++ L + N +T + ++N L
Sbjct: 552 ALLEEMYHNGLSPDIVTYKTLINRLCKADNMEAALTLCKEMGKRGCHLNVLTCAKLVNGL 611
Query: 85 LKAGRWIEAIELLHDMEVQGIHPDVVTY 2
KAGR EA++LL +M ++PD+ Y
Sbjct: 612 KKAGRTEEAMDLL-EMYHDSLNPDIFKY 638
Score = 117 bits (292), Expect = 7e-26
Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 57/327 (17%)
Frame = -3
Query: 811 YYSRVSKVTECKDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQ 632
Y + ++ + + K + +++ H G P+ T + ++ + + + A+ + M
Sbjct: 103 YNTLINGLCKTKSLEDALALHKEMGRRGCHPTIFTYNTLIDGLCKDGRIEEAMALLEEMC 162
Query: 631 KLGFRVDTTVTNSLLPGLPKSRQHLENLSVT---------PHFTSYNLAILGLCLEGKLL 479
G D +L+ L K E L + P +YN + L EG++
Sbjct: 163 HYGLNPDVVTYTTLIHMLCKVNNVEEALELLKKMGKMGCHPDIVTYNTIMDALSKEGRIE 222
Query: 478 AAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILI 299
A++LL EM +NG ++++TY +L++ L K+ KV++A+ L K + E+ + +TY+ LI
Sbjct: 223 IAINLLDEMHHNGVNSDVVTYTSLMNMLFKADKVEQALALCKEIRERGCHPDHVTYTTLI 282
Query: 298 DGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDE-------------- 161
DGL + RI E L +MH++G+ PD++TYN ++N R+ I+E
Sbjct: 283 DGLSKDGRIAEAMEFLEEMHQKGLNPDKITYNSIVNGFCRANKIEEALDLHRVIRKKGIF 342
Query: 160 -----------GLKVLNRTHDNS-----------------------SNAVTYSCVINALL 83
GL + R + S + VTY+ +IN+L
Sbjct: 343 LDVGTYSVLLYGLIRIGRKQEASILLEEIYHKAMRFCGQVGKTGCRLDTVTYTMLINSLS 402
Query: 82 KAGRWIEAIELLHDMEVQGIHPDVVTY 2
K G+ EA+ L+ +M ++PDVVTY
Sbjct: 403 KRGKIKEAMALVDEMYNNDLNPDVVTY 429
>ERM96976.1 hypothetical protein AMTR_s00074p00175610 [Amborella trichopoda]
Length = 404
Score = 149 bits (377), Expect = 8e-39
Identities = 89/270 (32%), Positives = 141/270 (52%), Gaps = 11/270 (4%)
Frame = -3
Query: 778 KDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVT 599
K D ++S + + +G P+F L + N F + ALG + +QKLG+ + +
Sbjct: 21 KRPDQALSLYKTMAGAGISPNFQMLHTLPNCFCEFQRTHLALGVIGRIQKLGYPLSVILL 80
Query: 598 NSLLPGLPKSRQ---------HLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVN 446
N ++ GL K Q ++N + P+ S+N I GLC K+ AM +L+EM
Sbjct: 81 NMVMNGLSKEGQVVRAIELFHGMQNYKLLPNVFSFNTLINGLCKAQKVEEAMAMLKEMGK 140
Query: 445 NGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEE 266
G +++TY L++ LCK G +EAM L++ M D+N ++ ++ LI+G C+ R+EE
Sbjct: 141 RGCQPDVVTYNILMNGLCKEGSTEEAMHLLEKMYRNDLNPNVFAFNALINGFCKADRVEE 200
Query: 265 GFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVIN 92
L M K G PD VTY+ LI+ + G I E + L N ++ VTY ++N
Sbjct: 201 ALALYKGMGKIGCQPDFVTYSTLIDGLCKGGRIKEAMSFLEEMCHNGLKADVVTYCTLMN 260
Query: 91 ALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
L K + A++LL +M G P+VVTY
Sbjct: 261 VLCKKNKVEVALDLLKEMGKMGCQPNVVTY 290
Score = 129 bits (325), Expect = 3e-31
Identities = 82/254 (32%), Positives = 128/254 (50%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T MN + + A+ + M + + N+L+ G K+ + E
Sbjct: 142 GCQPDVVTYNILMNGLCKEGSTEEAMHLLEKMYRNDLNPNVFAFNALINGFCKADRVEEA 201
Query: 550 LSV---------TPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L++ P F +Y+ I GLC G++ AM L EM +NG A+++TY L++
Sbjct: 202 LALYKGMGKIGCQPDFVTYSTLIDGLCKGGRIKEAMSFLEEMCHNGLKADVVTYCTLMNV 261
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK KV+ A+ L+K M + +++TYS LI LC+ R EE LL +M G+ P+
Sbjct: 262 LCKKNKVEVALDLLKEMGKMGCQPNVVTYSTLIALLCKGGRTEEAMSLLAQMFHSGLNPN 321
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLH 44
V +NILIN + ++E L + N +TYS +I+ K R EA+ LL
Sbjct: 322 VVIHNILINVLCKRNELEEALTFYKEIGKSGCQPNIITYSTLIDGFCKGQRTKEAMSLLE 381
Query: 43 DMEVQGIHPDVVTY 2
+M G++P+VVTY
Sbjct: 382 EMYDNGLNPNVVTY 395
Score = 93.2 bits (230), Expect = 5e-18
Identities = 69/247 (27%), Positives = 108/247 (43%), Gaps = 46/247 (18%)
Frame = -3
Query: 781 CKDNDSSISEHLSTNM--SGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDT 608
CK+ + + HL M + P+ + +N F + ++ + AL M K+G + D
Sbjct: 158 CKEGSTEEAMHLLEKMYRNDLNPNVFAFNALINGFCKADRVEEALALYKGMGKIGCQPDF 217
Query: 607 TVTNSLLPGLPKSRQHLENLSVTPHF---------TSYNLAILGLCLEGKLLAAMDLLRE 455
++L+ GL K + E +S +Y + LC + K+ A+DLL+E
Sbjct: 218 VTYSTLIDGLCKGGRIKEAMSFLEEMCHNGLKADVVTYCTLMNVLCKKNKVEVALDLLKE 277
Query: 454 MVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINAS---------------- 323
M G N++TY LI+ LCK G+ +EAM L+ M +N +
Sbjct: 278 MGKMGCQPNVVTYSTLIALLCKGGRTEEAMSLLAQMFHSGLNPNVVIHNILINVLCKRNE 337
Query: 322 -------------------IITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNI 200
IITYS LIDG C+ R +E LL +M+ G+ P+ VTYN
Sbjct: 338 LEEALTFYKEIGKSGCQPNIITYSTLIDGFCKGQRTKEAMSLLEEMYDNGLNPNVVTYNT 397
Query: 199 LINACTR 179
L C +
Sbjct: 398 LKMHCAK 404
>CDY68929.1 BnaA08g31580D [Brassica napus]
Length = 607
Score = 152 bits (385), Expect = 1e-38
Identities = 90/282 (31%), Positives = 155/282 (54%), Gaps = 8/282 (2%)
Frame = -3
Query: 823 PNNKYYSRV-SKVTECKDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGA 647
P ++SR+ S + + + + +S + G + TL +N F+R K A A
Sbjct: 64 PTIIHFSRLFSSLAKTRQYELVLSLSKQMELQGVAHNNYTLNIMINCFSRRRKLGFAFSA 123
Query: 646 VAAMQKLGFRVDTTVTNSLLPGLPKSRQHLENLS-----VTPHFTSYNLAILGLCLEGKL 482
+A M KLG+ DT ++L+ GL + E ++ V P+ + N + GLCL GK+
Sbjct: 124 MAKMLKLGYEPDTVTFSTLVNGLCLEGRVSEAVALVDRMVGPNLVTLNTLVNGLCLNGKV 183
Query: 481 LAAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSIL 302
A+ L+ MV NG + TYG +++R+CKSG A+ L++ M+++ + +TY+++
Sbjct: 184 YEAVALVDRMVENGCQPDQFTYGPILNRICKSGNTSLALDLLRKMEDRKVKPEAVTYNMI 243
Query: 301 IDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNR--THDN 128
ID LC+ +E+ L +M ++GI + +TYN LI+ +G DE ++L T
Sbjct: 244 IDSLCKDGSLEDALNLFNEMERKGIKANVITYNTLISNFCNAGRWDEAAQLLRDMITRGI 303
Query: 127 SSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+ N +T+S +I+ +K G+ +EA EL ++M +GI PD VTY
Sbjct: 304 TPNVITFSALIDIFVKEGKHVEAKELYNEMIARGIDPDTVTY 345
Score = 113 bits (282), Expect = 1e-24
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 44/284 (15%)
Frame = -3
Query: 721 PSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSR-------- 566
P+ TL + +N K A+ V M + G + D +L + KS
Sbjct: 165 PNLVTLNTLVNGLCLNGKVYEAVALVDRMVENGCQPDQFTYGPILNRICKSGNTSLALDL 224
Query: 565 -QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCK 389
+ +E+ V P +YN+ I LC +G L A++L EM G AN++TY LIS C
Sbjct: 225 LRKMEDRKVKPEAVTYNMIIDSLCKDGSLEDALNLFNEMERKGIKANVITYNTLISNFCN 284
Query: 388 SGKVKEAMILMK*MDEKDINASIITYSILID----------------------------- 296
+G+ EA L++ M + I ++IT+S LID
Sbjct: 285 AGRWDEAAQLLRDMITRGITPNVITFSALIDIFVKEGKHVEAKELYNEMIARGIDPDTVT 344
Query: 295 ------GLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTH 134
GLC R++E ++ M +G PD VTYNI+IN ++ +++GLK+ +
Sbjct: 345 YNSLIYGLCMEKRLDEANQMMDVMVSKGCSPDSVTYNIIINGYCKAKRVEDGLKLFRKM- 403
Query: 133 DNSSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+ V+Y+ ++ + + A EL +M +G+ PD VTY
Sbjct: 404 -SLREVVSYNTLVQGFCLSRKIEVAQELFQEMVSRGVDPDTVTY 446
Score = 97.8 bits (242), Expect = 3e-19
Identities = 62/249 (24%), Positives = 122/249 (48%), Gaps = 7/249 (2%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T S + + D A + M G D+ N ++ G K+++ +
Sbjct: 337 GIDPDTVTYNSLIYGLCMEKRLDEANQMMDVMVSKGCSPDSVTYNIIINGYCKAKRVEDG 396
Query: 550 LSVTPHFT-----SYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKS 386
L + + SYN + G CL K+ A +L +EMV+ G + +TY L+ LC++
Sbjct: 397 LKLFRKMSLREVVSYNTLVQGFCLSRKIEVAQELFQEMVSRGVDPDTVTYNILVDGLCEN 456
Query: 385 GKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTY 206
GK+++A+ + + + + ++ I ++I+I G+C S I++ + L + + +G+ D TY
Sbjct: 457 GKLEKALEIFEDLHKSEVELDIGIFNIIIHGMCNGSMIDKAWELFSSLAHKGVKADVKTY 516
Query: 205 NILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLHDMEV 32
I+I + G++ E +L + ++ + N TY+ +I A L +++L+ +M+
Sbjct: 517 TIMIGGLCKKGSLSEADMLLRKMEEDGIAPNGCTYNTLIRAHLGGSGVATSVKLIEEMKR 576
Query: 31 QGIHPDVVT 5
G D T
Sbjct: 577 FGFAADAST 585
Score = 67.4 bits (163), Expect = 5e-09
Identities = 44/158 (27%), Positives = 79/158 (50%)
Frame = -3
Query: 475 AMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILID 296
A++L + M+ + I+ + L S L K+ + + + L K M+ + + + T +I+I+
Sbjct: 50 AVELFQSMIVSRPLPTIIHFSRLFSSLAKTRQYELVLSLSKQMELQGVAHNNYTLNIMIN 109
Query: 295 GLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDNSSNA 116
R ++ F + KM K G PD VT++ L+N G + E + +++R N
Sbjct: 110 CFSRRRKLGFAFSAMAKMLKLGYEPDTVTFSTLVNGLCLEGRVSEAVALVDRM--VGPNL 167
Query: 115 VTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
VT + ++N L G+ EA+ L+ M G PD TY
Sbjct: 168 VTLNTLVNGLCLNGKVYEAVALVDRMVENGCQPDQFTY 205
Score = 59.7 bits (143), Expect = 2e-06
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 9/185 (4%)
Frame = -3
Query: 718 SFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGL------PKSRQHL 557
S++TL+ F + K + A M G DT N L+ GL K+ +
Sbjct: 410 SYNTLVQG---FCLSRKIEVAQELFQEMVSRGVDPDTVTYNILVDGLCENGKLEKALEIF 466
Query: 556 ENL---SVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKS 386
E+L V +N+ I G+C + A +L + + G A++ TY +I LCK
Sbjct: 467 EDLHKSEVELDIGIFNIIIHGMCNGSMIDKAWELFSSLAHKGVKADVKTYTIMIGGLCKK 526
Query: 385 GKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTY 206
G + EA +L++ M+E I + TY+ LI S + L+ +M + G D T
Sbjct: 527 GSLSEADMLLRKMEEDGIAPNGCTYNTLIRAHLGGSGVATSVKLIEEMKRFGFAADASTM 586
Query: 205 NILIN 191
++I+
Sbjct: 587 KMVID 591
>XP_009110633.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g12620-like isoform X2 [Brassica rapa]
Length = 607
Score = 152 bits (384), Expect = 1e-38
Identities = 90/282 (31%), Positives = 155/282 (54%), Gaps = 8/282 (2%)
Frame = -3
Query: 823 PNNKYYSRV-SKVTECKDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGA 647
P ++SR+ S + + + + +S + G + TL +N F+R K A A
Sbjct: 64 PTIIHFSRLFSSLAKTRQYELVLSLSKQMELHGVAHNNYTLNIMINCFSRRRKLGFAFSA 123
Query: 646 VAAMQKLGFRVDTTVTNSLLPGLPKSRQHLENLS-----VTPHFTSYNLAILGLCLEGKL 482
+A M KLG+ DT ++L+ GL + E ++ V P+ + N + GLCL GK+
Sbjct: 124 MAKMLKLGYEPDTVTFSTLVNGLCLEGRVSEAVALVDRMVGPNLVTLNTLVNGLCLNGKV 183
Query: 481 LAAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSIL 302
A+ L+ MV NG + TYG +++R+CKSG A+ L++ M+++ + +TY+++
Sbjct: 184 YEAVALVDRMVENGCQPDQFTYGPILNRICKSGNTSLALDLLRKMEDRKVKPEAVTYNMI 243
Query: 301 IDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNR--THDN 128
ID LC+ +E+ L +M ++GI + +TYN LI+ +G DE ++L T
Sbjct: 244 IDSLCKDGSLEDALNLFNEMERKGIKANVITYNTLISNFCNAGRWDEAAQLLRDMITRGI 303
Query: 127 SSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+ N +T+S +I+ +K G+ +EA EL ++M +GI PD VTY
Sbjct: 304 TPNVITFSALIDIFVKEGKHVEAKELYNEMIARGIDPDTVTY 345
Score = 113 bits (282), Expect = 1e-24
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 44/284 (15%)
Frame = -3
Query: 721 PSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSR-------- 566
P+ TL + +N K A+ V M + G + D +L + KS
Sbjct: 165 PNLVTLNTLVNGLCLNGKVYEAVALVDRMVENGCQPDQFTYGPILNRICKSGNTSLALDL 224
Query: 565 -QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCK 389
+ +E+ V P +YN+ I LC +G L A++L EM G AN++TY LIS C
Sbjct: 225 LRKMEDRKVKPEAVTYNMIIDSLCKDGSLEDALNLFNEMERKGIKANVITYNTLISNFCN 284
Query: 388 SGKVKEAMILMK*MDEKDINASIITYSILID----------------------------- 296
+G+ EA L++ M + I ++IT+S LID
Sbjct: 285 AGRWDEAAQLLRDMITRGITPNVITFSALIDIFVKEGKHVEAKELYNEMIARGIDPDTVT 344
Query: 295 ------GLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTH 134
GLC R++E ++ M +G PD VTYNI+IN ++ +++GLK+ +
Sbjct: 345 YNSLIYGLCMEKRLDEANQMMDVMVSKGCSPDSVTYNIIINGYCKAKRVEDGLKLFRKM- 403
Query: 133 DNSSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+ V+Y+ ++ + + A EL +M +G+ PD VTY
Sbjct: 404 -SLREVVSYNTLVQGFCLSRKIEVAEELFQEMVSRGVDPDTVTY 446
Score = 97.1 bits (240), Expect = 5e-19
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 7/249 (2%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T S + + D A + M G D+ N ++ G K+++ +
Sbjct: 337 GIDPDTVTYNSLIYGLCMEKRLDEANQMMDVMVSKGCSPDSVTYNIIINGYCKAKRVEDG 396
Query: 550 LSVTPHFT-----SYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKS 386
L + + SYN + G CL K+ A +L +EMV+ G + +TY L+ LC++
Sbjct: 397 LKLFRKMSLREVVSYNTLVQGFCLSRKIEVAEELFQEMVSRGVDPDTVTYNILVDGLCEN 456
Query: 385 GKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTY 206
GK+++A+ + + + + ++ I ++I+I G+C S I++ + L + + +G+ D TY
Sbjct: 457 GKLEKALEIFEDLHKSEVELDIGIFNIIIHGMCNGSMIDKAWELFSSLAHKGVKADVKTY 516
Query: 205 NILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLHDMEV 32
I+I + G++ E + + ++ + N TY+ +I A L ++EL+ +M+
Sbjct: 517 TIMIGGLCKKGSLSEADMLFRKMEEDGIAPNECTYNTLIRAHLGGSGVATSVELIEEMKR 576
Query: 31 QGIHPDVVT 5
G D T
Sbjct: 577 CGFSADAST 585
Score = 66.6 bits (161), Expect = 1e-08
Identities = 44/158 (27%), Positives = 78/158 (49%)
Frame = -3
Query: 475 AMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILID 296
A++L + M+ + I+ + L S L K+ + + + L K M+ + + T +I+I+
Sbjct: 50 AVELFQSMIVSRPLPTIIHFSRLFSSLAKTRQYELVLSLSKQMELHGVAHNNYTLNIMIN 109
Query: 295 GLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDNSSNA 116
R ++ F + KM K G PD VT++ L+N G + E + +++R N
Sbjct: 110 CFSRRRKLGFAFSAMAKMLKLGYEPDTVTFSTLVNGLCLEGRVSEAVALVDRM--VGPNL 167
Query: 115 VTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
VT + ++N L G+ EA+ L+ M G PD TY
Sbjct: 168 VTLNTLVNGLCLNGKVYEAVALVDRMVENGCQPDQFTY 205
Score = 57.8 bits (138), Expect = 8e-06
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Frame = -3
Query: 718 SFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGL------PKSRQHL 557
S++TL+ F + K + A M G DT N L+ GL K+ +
Sbjct: 410 SYNTLVQG---FCLSRKIEVAEELFQEMVSRGVDPDTVTYNILVDGLCENGKLEKALEIF 466
Query: 556 ENL---SVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKS 386
E+L V +N+ I G+C + A +L + + G A++ TY +I LCK
Sbjct: 467 EDLHKSEVELDIGIFNIIIHGMCNGSMIDKAWELFSSLAHKGVKADVKTYTIMIGGLCKK 526
Query: 385 GKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTY 206
G + EA +L + M+E I + TY+ LI S + L+ +M + G D T
Sbjct: 527 GSLSEADMLFRKMEEDGIAPNECTYNTLIRAHLGGSGVATSVELIEEMKRCGFSADASTM 586
Query: 205 NILIN 191
++I+
Sbjct: 587 KMVID 591
>XP_013677859.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g12620-like [Brassica napus]
Length = 612
Score = 152 bits (384), Expect = 2e-38
Identities = 90/282 (31%), Positives = 155/282 (54%), Gaps = 8/282 (2%)
Frame = -3
Query: 823 PNNKYYSRV-SKVTECKDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGA 647
P ++SR+ S + + + + +S + G + TL +N F+R K A A
Sbjct: 69 PTIIHFSRLFSSLAKTRQYELVLSLSKQMELQGIAHNNYTLNIMINCFSRRRKLGFAFSA 128
Query: 646 VAAMQKLGFRVDTTVTNSLLPGLPKSRQHLENLS-----VTPHFTSYNLAILGLCLEGKL 482
+A M KLG+ DT ++L+ GL + E ++ V P+ + N + GLCL GK+
Sbjct: 129 MAKMLKLGYEPDTVTFSTLVNGLCLEGRVSEAVALVDRMVGPNLVTLNTLVNGLCLNGKV 188
Query: 481 LAAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSIL 302
A+ L+ MV NG + TYG +++R+CKSG A+ L++ M+++ + +TY+++
Sbjct: 189 YEAVALVDRMVENGCQPDQFTYGPILNRICKSGNTSLALDLLRKMEDRKVKPEAVTYNMI 248
Query: 301 IDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNR--THDN 128
ID LC+ +E+ L +M ++GI + +TYN LI+ +G DE ++L T
Sbjct: 249 IDSLCKDGSLEDALNLFNEMERKGIKANVITYNTLISNFCNAGRWDEAAQLLRDMITRGI 308
Query: 127 SSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+ N +T+S +I+ +K G+ +EA EL ++M +GI PD VTY
Sbjct: 309 TPNVITFSALIDIFVKEGKHVEAKELYNEMIARGIDPDTVTY 350
Score = 118 bits (296), Expect = 2e-26
Identities = 82/284 (28%), Positives = 129/284 (45%), Gaps = 44/284 (15%)
Frame = -3
Query: 721 PSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSR-------- 566
P+ TL + +N K A+ V M + G + D +L + KS
Sbjct: 170 PNLVTLNTLVNGLCLNGKVYEAVALVDRMVENGCQPDQFTYGPILNRICKSGNTSLALDL 229
Query: 565 -QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCK 389
+ +E+ V P +YN+ I LC +G L A++L EM G AN++TY LIS C
Sbjct: 230 LRKMEDRKVKPEAVTYNMIIDSLCKDGSLEDALNLFNEMERKGIKANVITYNTLISNFCN 289
Query: 388 SGKVKEAMILMK*MDEKDINASIITYSILID----------------------------- 296
+G+ EA L++ M + I ++IT+S LID
Sbjct: 290 AGRWDEAAQLLRDMITRGITPNVITFSALIDIFVKEGKHVEAKELYNEMIARGIDPDTVT 349
Query: 295 ------GLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTH 134
GLC R++E +L M +G PD VTYNI+IN ++ +D+GLK+ +
Sbjct: 350 YNSLIYGLCMEKRLDEANQMLDVMVSKGCSPDSVTYNIIINGYCKAKRVDDGLKLFRKM- 408
Query: 133 DNSSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+ V+Y+ ++ +G+ A EL +M +G+ PD VTY
Sbjct: 409 -SLREVVSYNTLVQGFCLSGKIEVAEELFQEMVSRGVDPDTVTY 451
Score = 101 bits (252), Expect = 1e-20
Identities = 64/249 (25%), Positives = 123/249 (49%), Gaps = 7/249 (2%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T S + + D A + M G D+ N ++ G K+++ +
Sbjct: 342 GIDPDTVTYNSLIYGLCMEKRLDEANQMLDVMVSKGCSPDSVTYNIIINGYCKAKRVDDG 401
Query: 550 LSVTPHFT-----SYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKS 386
L + + SYN + G CL GK+ A +L +EMV+ G + +TY L+ LC++
Sbjct: 402 LKLFRKMSLREVVSYNTLVQGFCLSGKIEVAEELFQEMVSRGVDPDTVTYNILVDGLCEN 461
Query: 385 GKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTY 206
GK+++A+ + + + + ++ I Y+I+I G+C S+I+E + L + + +G+ D TY
Sbjct: 462 GKLEKALEIFEDLQKSEMELDIGIYNIIIHGMCNGSKIDEAWELFSSLAHKGVKADVKTY 521
Query: 205 NILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLHDMEV 32
I+I + G++ E + + ++ + N TY+ +I A L +++L+ +M+
Sbjct: 522 TIMIGGLCKKGSLSEADMLFTKMEEDGIAPNECTYNTLIRAHLGGSGVATSVKLIEEMKR 581
Query: 31 QGIHPDVVT 5
G D T
Sbjct: 582 CGFAADAST 590
Score = 67.8 bits (164), Expect = 4e-09
Identities = 45/158 (28%), Positives = 79/158 (50%)
Frame = -3
Query: 475 AMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILID 296
A++L + M+ + I+ + L S L K+ + + + L K M+ + I + T +I+I+
Sbjct: 55 AVELFQSMIVSRPLPTIIHFSRLFSSLAKTRQYELVLSLSKQMELQGIAHNNYTLNIMIN 114
Query: 295 GLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDNSSNA 116
R ++ F + KM K G PD VT++ L+N G + E + +++R N
Sbjct: 115 CFSRRRKLGFAFSAMAKMLKLGYEPDTVTFSTLVNGLCLEGRVSEAVALVDRM--VGPNL 172
Query: 115 VTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
VT + ++N L G+ EA+ L+ M G PD TY
Sbjct: 173 VTLNTLVNGLCLNGKVYEAVALVDRMVENGCQPDQFTY 210
Score = 59.3 bits (142), Expect = 3e-06
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 9/185 (4%)
Frame = -3
Query: 718 SFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSR--------- 566
S++TL+ F + K + A M G DT N L+ GL ++
Sbjct: 415 SYNTLVQG---FCLSGKIEVAEELFQEMVSRGVDPDTVTYNILVDGLCENGKLEKALEIF 471
Query: 565 QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKS 386
+ L+ + YN+ I G+C K+ A +L + + G A++ TY +I LCK
Sbjct: 472 EDLQKSEMELDIGIYNIIIHGMCNGSKIDEAWELFSSLAHKGVKADVKTYTIMIGGLCKK 531
Query: 385 GKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTY 206
G + EA +L M+E I + TY+ LI S + L+ +M + G D T
Sbjct: 532 GSLSEADMLFTKMEEDGIAPNECTYNTLIRAHLGGSGVATSVKLIEEMKRCGFAADASTM 591
Query: 205 NILIN 191
++++
Sbjct: 592 KMVMD 596
>XP_009110632.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g12620-like isoform X1 [Brassica rapa]
Length = 647
Score = 152 bits (384), Expect = 2e-38
Identities = 90/282 (31%), Positives = 155/282 (54%), Gaps = 8/282 (2%)
Frame = -3
Query: 823 PNNKYYSRV-SKVTECKDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGA 647
P ++SR+ S + + + + +S + G + TL +N F+R K A A
Sbjct: 104 PTIIHFSRLFSSLAKTRQYELVLSLSKQMELHGVAHNNYTLNIMINCFSRRRKLGFAFSA 163
Query: 646 VAAMQKLGFRVDTTVTNSLLPGLPKSRQHLENLS-----VTPHFTSYNLAILGLCLEGKL 482
+A M KLG+ DT ++L+ GL + E ++ V P+ + N + GLCL GK+
Sbjct: 164 MAKMLKLGYEPDTVTFSTLVNGLCLEGRVSEAVALVDRMVGPNLVTLNTLVNGLCLNGKV 223
Query: 481 LAAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSIL 302
A+ L+ MV NG + TYG +++R+CKSG A+ L++ M+++ + +TY+++
Sbjct: 224 YEAVALVDRMVENGCQPDQFTYGPILNRICKSGNTSLALDLLRKMEDRKVKPEAVTYNMI 283
Query: 301 IDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNR--THDN 128
ID LC+ +E+ L +M ++GI + +TYN LI+ +G DE ++L T
Sbjct: 284 IDSLCKDGSLEDALNLFNEMERKGIKANVITYNTLISNFCNAGRWDEAAQLLRDMITRGI 343
Query: 127 SSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+ N +T+S +I+ +K G+ +EA EL ++M +GI PD VTY
Sbjct: 344 TPNVITFSALIDIFVKEGKHVEAKELYNEMIARGIDPDTVTY 385
Score = 113 bits (282), Expect = 2e-24
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 44/284 (15%)
Frame = -3
Query: 721 PSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSR-------- 566
P+ TL + +N K A+ V M + G + D +L + KS
Sbjct: 205 PNLVTLNTLVNGLCLNGKVYEAVALVDRMVENGCQPDQFTYGPILNRICKSGNTSLALDL 264
Query: 565 -QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCK 389
+ +E+ V P +YN+ I LC +G L A++L EM G AN++TY LIS C
Sbjct: 265 LRKMEDRKVKPEAVTYNMIIDSLCKDGSLEDALNLFNEMERKGIKANVITYNTLISNFCN 324
Query: 388 SGKVKEAMILMK*MDEKDINASIITYSILID----------------------------- 296
+G+ EA L++ M + I ++IT+S LID
Sbjct: 325 AGRWDEAAQLLRDMITRGITPNVITFSALIDIFVKEGKHVEAKELYNEMIARGIDPDTVT 384
Query: 295 ------GLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTH 134
GLC R++E ++ M +G PD VTYNI+IN ++ +++GLK+ +
Sbjct: 385 YNSLIYGLCMEKRLDEANQMMDVMVSKGCSPDSVTYNIIINGYCKAKRVEDGLKLFRKM- 443
Query: 133 DNSSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+ V+Y+ ++ + + A EL +M +G+ PD VTY
Sbjct: 444 -SLREVVSYNTLVQGFCLSRKIEVAEELFQEMVSRGVDPDTVTY 486
Score = 97.1 bits (240), Expect = 6e-19
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 7/249 (2%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T S + + D A + M G D+ N ++ G K+++ +
Sbjct: 377 GIDPDTVTYNSLIYGLCMEKRLDEANQMMDVMVSKGCSPDSVTYNIIINGYCKAKRVEDG 436
Query: 550 LSVTPHFT-----SYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKS 386
L + + SYN + G CL K+ A +L +EMV+ G + +TY L+ LC++
Sbjct: 437 LKLFRKMSLREVVSYNTLVQGFCLSRKIEVAEELFQEMVSRGVDPDTVTYNILVDGLCEN 496
Query: 385 GKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTY 206
GK+++A+ + + + + ++ I ++I+I G+C S I++ + L + + +G+ D TY
Sbjct: 497 GKLEKALEIFEDLHKSEVELDIGIFNIIIHGMCNGSMIDKAWELFSSLAHKGVKADVKTY 556
Query: 205 NILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLHDMEV 32
I+I + G++ E + + ++ + N TY+ +I A L ++EL+ +M+
Sbjct: 557 TIMIGGLCKKGSLSEADMLFRKMEEDGIAPNECTYNTLIRAHLGGSGVATSVELIEEMKR 616
Query: 31 QGIHPDVVT 5
G D T
Sbjct: 617 CGFSADAST 625
Score = 66.6 bits (161), Expect = 1e-08
Identities = 44/158 (27%), Positives = 78/158 (49%)
Frame = -3
Query: 475 AMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILID 296
A++L + M+ + I+ + L S L K+ + + + L K M+ + + T +I+I+
Sbjct: 90 AVELFQSMIVSRPLPTIIHFSRLFSSLAKTRQYELVLSLSKQMELHGVAHNNYTLNIMIN 149
Query: 295 GLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDNSSNA 116
R ++ F + KM K G PD VT++ L+N G + E + +++R N
Sbjct: 150 CFSRRRKLGFAFSAMAKMLKLGYEPDTVTFSTLVNGLCLEGRVSEAVALVDRM--VGPNL 207
Query: 115 VTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
VT + ++N L G+ EA+ L+ M G PD TY
Sbjct: 208 VTLNTLVNGLCLNGKVYEAVALVDRMVENGCQPDQFTY 245
Score = 57.8 bits (138), Expect = 8e-06
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Frame = -3
Query: 718 SFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGL------PKSRQHL 557
S++TL+ F + K + A M G DT N L+ GL K+ +
Sbjct: 450 SYNTLVQG---FCLSRKIEVAEELFQEMVSRGVDPDTVTYNILVDGLCENGKLEKALEIF 506
Query: 556 ENL---SVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKS 386
E+L V +N+ I G+C + A +L + + G A++ TY +I LCK
Sbjct: 507 EDLHKSEVELDIGIFNIIIHGMCNGSMIDKAWELFSSLAHKGVKADVKTYTIMIGGLCKK 566
Query: 385 GKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTY 206
G + EA +L + M+E I + TY+ LI S + L+ +M + G D T
Sbjct: 567 GSLSEADMLFRKMEEDGIAPNECTYNTLIRAHLGGSGVATSVELIEEMKRCGFSADASTM 626
Query: 205 NILIN 191
++I+
Sbjct: 627 KMVID 631
>XP_006829560.2 PREDICTED: pentatricopeptide repeat-containing protein At1g62680,
mitochondrial [Amborella trichopoda]
Length = 372
Score = 147 bits (371), Expect = 3e-38
Identities = 86/255 (33%), Positives = 134/255 (52%), Gaps = 11/255 (4%)
Frame = -3
Query: 733 SGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQ--- 563
+G P+F L + N F + ALG + +QKLG+ + + N ++ GL K Q
Sbjct: 4 AGISPNFQMLHTLPNCFCEFQRTHLALGVIGRIQKLGYPLSVILLNMVMNGLSKEGQVVR 63
Query: 562 ------HLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLIS 401
++N + P+ S+N I GLC K+ AM +L+EM G +++TY L++
Sbjct: 64 AIELFHGMQNYKLLPNVFSFNTLINGLCKAQKVEEAMAMLKEMGKRGCQPDVVTYNILMN 123
Query: 400 RLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICP 221
LCK G +EAM L++ M D+N ++ ++ LI+G C+ R+EE L M K G P
Sbjct: 124 GLCKEGSTEEAMHLLEKMYRNDLNPNVFAFNALINGFCKADRVEEALALYKGMGKIGCQP 183
Query: 220 DRVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELL 47
D VTY+ LI+ + G I E + L N ++ VTY ++N L K + A++LL
Sbjct: 184 DFVTYSTLIDGLCKGGRIKEAMSFLEEMCHNGLKADVVTYCTLMNVLCKKNKVEVALDLL 243
Query: 46 HDMEVQGIHPDVVTY 2
+M G P+VVTY
Sbjct: 244 KEMGKMGCQPNVVTY 258
Score = 129 bits (325), Expect = 2e-31
Identities = 82/254 (32%), Positives = 128/254 (50%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T MN + + A+ + M + + N+L+ G K+ + E
Sbjct: 110 GCQPDVVTYNILMNGLCKEGSTEEAMHLLEKMYRNDLNPNVFAFNALINGFCKADRVEEA 169
Query: 550 LSV---------TPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L++ P F +Y+ I GLC G++ AM L EM +NG A+++TY L++
Sbjct: 170 LALYKGMGKIGCQPDFVTYSTLIDGLCKGGRIKEAMSFLEEMCHNGLKADVVTYCTLMNV 229
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LCK KV+ A+ L+K M + +++TYS LI LC+ R EE LL +M G+ P+
Sbjct: 230 LCKKNKVEVALDLLKEMGKMGCQPNVVTYSTLIALLCKGGRTEEAMSLLAQMFHSGLNPN 289
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLH 44
V +NILIN + ++E L + N +TYS +I+ K R EA+ LL
Sbjct: 290 VVIHNILINVLCKRNELEEALTFYKEIGKSGCQPNIITYSTLIDGFCKGQRTKEAMSLLE 349
Query: 43 DMEVQGIHPDVVTY 2
+M G++P+VVTY
Sbjct: 350 EMYDNGLNPNVVTY 363
Score = 93.2 bits (230), Expect = 4e-18
Identities = 69/247 (27%), Positives = 108/247 (43%), Gaps = 46/247 (18%)
Frame = -3
Query: 781 CKDNDSSISEHLSTNM--SGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDT 608
CK+ + + HL M + P+ + +N F + ++ + AL M K+G + D
Sbjct: 126 CKEGSTEEAMHLLEKMYRNDLNPNVFAFNALINGFCKADRVEEALALYKGMGKIGCQPDF 185
Query: 607 TVTNSLLPGLPKSRQHLENLSVTPHF---------TSYNLAILGLCLEGKLLAAMDLLRE 455
++L+ GL K + E +S +Y + LC + K+ A+DLL+E
Sbjct: 186 VTYSTLIDGLCKGGRIKEAMSFLEEMCHNGLKADVVTYCTLMNVLCKKNKVEVALDLLKE 245
Query: 454 MVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINAS---------------- 323
M G N++TY LI+ LCK G+ +EAM L+ M +N +
Sbjct: 246 MGKMGCQPNVVTYSTLIALLCKGGRTEEAMSLLAQMFHSGLNPNVVIHNILINVLCKRNE 305
Query: 322 -------------------IITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNI 200
IITYS LIDG C+ R +E LL +M+ G+ P+ VTYN
Sbjct: 306 LEEALTFYKEIGKSGCQPNIITYSTLIDGFCKGQRTKEAMSLLEEMYDNGLNPNVVTYNT 365
Query: 199 LINACTR 179
L C +
Sbjct: 366 LKMHCAK 372
>XP_006417205.1 hypothetical protein EUTSA_v10007048mg [Eutrema salsugineum]
ESQ35558.1 hypothetical protein EUTSA_v10007048mg
[Eutrema salsugineum]
Length = 635
Score = 151 bits (382), Expect = 4e-38
Identities = 88/276 (31%), Positives = 148/276 (53%), Gaps = 11/276 (3%)
Frame = -3
Query: 796 SKVTECKDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFR 617
S + + K D ++ ++G T +N F R+ K AA +A + KLG++
Sbjct: 94 SGIAKTKQYDLVLALSKQMELNGITHDIYTFNIMINCFCRSGKISAAFSVLAKVIKLGYK 153
Query: 616 VDTTVTNSLLPGLPKSRQHLENLSVT---------PHFTSYNLAILGLCLEGKLLAAMDL 464
DTT N+LL GL + E + + P+ + + + GLCL+G + A++L
Sbjct: 154 PDTTTFNTLLNGLCLVGRVSEAVELVDRMVETEHMPNLITLSTLVNGLCLKGSVSEAVEL 213
Query: 463 LREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCR 284
+ MV NG + TYG +++R+CKSGK AM L+K M+ + IN ++ Y+I+ID LC+
Sbjct: 214 IDRMVENGCQPDAFTYGPILNRICKSGKTALAMDLLKKMEGRKINLGVVHYNIVIDSLCK 273
Query: 283 ISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNR--THDNSSNAVT 110
+ L +M +GI D +TYN LI ++ D+G ++L T + + VT
Sbjct: 274 DGSFDNALNLFNEMETKGIKADVITYNSLIGGLCKADRWDDGAQLLRDMITRKITPDVVT 333
Query: 109 YSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
++ +I++ +K G+ +EA EL +M +GI PD +TY
Sbjct: 334 FNALIDSFVKEGKLVEANELYKEMITRGIDPDTITY 369
Score = 115 bits (287), Expect = 3e-25
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 13/273 (4%)
Frame = -3
Query: 781 CKDNDSSISEHLSTNMSGTLPSFSTLLSSM--NSFTRTNKHDAALGAVAAMQKLGFRVDT 608
CK ++++ L M G + + ++ +S + D AL M+ G + D
Sbjct: 237 CKSGKTALAMDLLKKMEGRKINLGVVHYNIVIDSLCKDGSFDNALNLFNEMETKGIKADV 296
Query: 607 TVTNSLLPGLPKS------RQHLENL---SVTPHFTSYNLAILGLCLEGKLLAAMDLLRE 455
NSL+ GL K+ Q L ++ +TP ++N I EGKL+ A +L +E
Sbjct: 297 ITYNSLIGGLCKADRWDDGAQLLRDMITRKITPDVVTFNALIDSFVKEGKLVEANELYKE 356
Query: 454 MVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISR 275
M+ G + +TY +LI C ++ EA ++ M K + +++TY ILI+G C+ +R
Sbjct: 357 MITRGIDPDTITYNSLIYGFCMENRLDEANQMLDLMVGKGCDPTVVTYGILINGFCKANR 416
Query: 274 IEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNR--THDNSSNAVTYSC 101
+++G L KM G+ D VTYN LI ++SG I+ ++ + + +TY
Sbjct: 417 VDDGLELFRKMSLRGVVADTVTYNTLIKGFSQSGKINVAKELFQEMVSRGVPPSILTYGI 476
Query: 100 VINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+++ L G +A+E+L M+ + + Y
Sbjct: 477 LLDGLCNNGEVEKALEILGKMQKSKMDLGIAIY 509
Score = 99.8 bits (247), Expect = 7e-20
Identities = 62/234 (26%), Positives = 113/234 (48%), Gaps = 2/234 (0%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P+ T +N F + N+ D L M G DT N+L+ G +S
Sbjct: 396 GCDPTVVTYGILINGFCKANRVDDGLELFRKMSLRGVVADTVTYNTLIKGFSQS------ 449
Query: 550 LSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKE 371
GK+ A +L +EMV+ G +ILTYG L+ LC +G+V++
Sbjct: 450 --------------------GKINVAKELFQEMVSRGVPPSILTYGILLDGLCNNGEVEK 489
Query: 370 AMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILIN 191
A+ ++ M + ++ I Y+I++ G+C S++++ + L + +G+ PD TY I+I
Sbjct: 490 ALEILGKMQKSKMDLGIAIYNIILHGMCNASKVDDAWDLFCNLPIKGLKPDVRTYTIMIG 549
Query: 190 ACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLHDME 35
+ G++ E + + ++ + + TY+ +I A L+ A+EL+ DM+
Sbjct: 550 GLCKKGSVSEADLLFKKMKEDEYAPDGCTYNILIRAHLRGSSLTTAVELIEDMK 603
Score = 87.8 bits (216), Expect = 8e-16
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Frame = -3
Query: 475 AMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILID 296
A+DL M+ N++ + NL S + K+ + + L K M+ I I T++I+I+
Sbjct: 70 AVDLFHSMIRYRPLPNVIDFNNLFSGIAKTKQYDLVLALSKQMELNGITHDIYTFNIMIN 129
Query: 295 GLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNR--THDNSS 122
CR +I F +L K+ K G PD T+N L+N G + E +++++R ++
Sbjct: 130 CFCRSGKISAAFSVLAKVIKLGYKPDTTTFNTLLNGLCLVGRVSEAVELVDRMVETEHMP 189
Query: 121 NAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
N +T S ++N L G EA+EL+ M G PD TY
Sbjct: 190 NLITLSTLVNGLCLKGSVSEAVELIDRMVENGCQPDAFTY 229
Score = 83.2 bits (204), Expect = 3e-14
Identities = 47/181 (25%), Positives = 95/181 (52%), Gaps = 2/181 (1%)
Frame = -3
Query: 538 PHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMIL 359
P+ +N G+ + + L ++M NG +I T+ +I+ C+SGK+ A +
Sbjct: 84 PNVIDFNNLFSGIAKTKQYDLVLALSKQMELNGITHDIYTFNIMINCFCRSGKISAAFSV 143
Query: 358 MK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTR 179
+ + + T++ L++GLC + R+ E L+ +M + P+ +T + L+N
Sbjct: 144 LAKVIKLGYKPDTTTFNTLLNGLCLVGRVSEAVELVDRMVETEHMPNLITLSTLVNGLCL 203
Query: 178 SGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVT 5
G++ E +++++R +N +A TY ++N + K+G+ A++LL ME + I+ VV
Sbjct: 204 KGSVSEAVELIDRMVENGCQPDAFTYGPILNRICKSGKTALAMDLLKKMEGRKINLGVVH 263
Query: 4 Y 2
Y
Sbjct: 264 Y 264
>4PJR_A Chain A, Crystal Structure Of Designed Cppr-nre Protein
Length = 303
Score = 145 bits (365), Expect = 5e-38
Identities = 87/254 (34%), Positives = 141/254 (55%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSR----- 566
G +++TL+S + + + + AL M++ G D +L+ GL K+
Sbjct: 1 GNSVTYNTLISGLG---KAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEA 57
Query: 565 ----QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
+ ++ + P +YN I GL G+L A++L EM G +++TY LIS
Sbjct: 58 LELFEEMKEKGIVPDVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISG 117
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
L K+G+++EA+ L + M EK I +++TY+ LI GL + R+EE L +M ++GI PD
Sbjct: 118 LGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPD 177
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDNS--SNAVTYSCVINALLKAGRWIEAIELLH 44
VTY LI+ ++G ++E L++ + N VTY+ +I+ L KAGR EA+EL
Sbjct: 178 VVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAGRLEEALELFE 237
Query: 43 DMEVQGIHPDVVTY 2
+M+ +GI PDVVTY
Sbjct: 238 EMKEKGIVPDVVTY 251
Score = 144 bits (364), Expect = 7e-38
Identities = 85/254 (33%), Positives = 139/254 (54%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSR----- 566
G +P T + ++ + + + AL M++ G D N+L+ GL K+
Sbjct: 33 GIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYNTLISGLGKAGRLEEA 92
Query: 565 ----QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
+ ++ + P +Y I GL G+L A++L EM G N++TY LIS
Sbjct: 93 LELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISG 152
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
L K+G+++EA+ L + M EK I ++TY+ LI GL + R+EE L +M ++GI P+
Sbjct: 153 LGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPN 212
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDNS--SNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G ++E L++ + + VTY+ +I+ L KAGR EA+EL
Sbjct: 213 VVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFE 272
Query: 43 DMEVQGIHPDVVTY 2
+M+ +GI P+VVTY
Sbjct: 273 EMKEKGIVPNVVTY 286
Score = 120 bits (300), Expect = 2e-28
Identities = 72/230 (31%), Positives = 122/230 (53%), Gaps = 11/230 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSR----- 566
G +P T + ++ + + + AL M++ G D +L+ GL K+
Sbjct: 68 GIVPDVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEA 127
Query: 565 ----QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
+ ++ + P+ +YN I GL G+L A++L EM G +++TY LIS
Sbjct: 128 LELFEEMKEKGIVPNVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISG 187
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
L K+G+++EA+ L + M EK I +++TY+ LI GL + R+EE L +M ++GI PD
Sbjct: 188 LGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPD 247
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDNS--SNAVTYSCVINALLKAG 74
VTY LI+ ++G ++E L++ + N VTY+ +I+ L KAG
Sbjct: 248 VVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAG 297
>JAU07964.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
caerulescens]
Length = 551
Score = 150 bits (378), Expect = 6e-38
Identities = 86/276 (31%), Positives = 148/276 (53%), Gaps = 11/276 (3%)
Frame = -3
Query: 796 SKVTECKDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFR 617
S V + K D + G + +L +N F R K +A + + KLG+
Sbjct: 4 SAVAKTKRYDLVLDLSKQMEFQGIAHNIYSLNIMINCFCRLRKPSSAFSVLGKILKLGYE 63
Query: 616 VDTTVTNSLLPGLPKSRQHLE---------NLSVTPHFTSYNLAILGLCLEGKLLAAMDL 464
DT N+L+ GL + E + +TP+ + N I G+CL+GK+ A+DL
Sbjct: 64 PDTVTFNTLINGLCLEGRVSEAVNLVDRMVEMELTPNLITLNTLINGVCLKGKVSEAVDL 123
Query: 463 LREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCR 284
+ MV+NG + +TYG +++ +CK GK A+ L++ M+E+ I +++ YSI+IDGLC+
Sbjct: 124 IGRMVDNGCQPDAVTYGPVLNIMCKQGKTSHALDLLRQMEERKIKLNVVQYSIIIDGLCK 183
Query: 283 ISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNR--THDNSSNAVT 110
++++ L +M + I D +TY+ LI + G ++G ++L T N VT
Sbjct: 184 DGKLDDALNLFKEMETKEIKADVITYSTLIGGLCKDGRWNDGAELLRDMITRKIIPNVVT 243
Query: 109 YSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+S +I++ +K G+ +EA EL ++M +GI P + TY
Sbjct: 244 FSALIDSFVKEGKLVEAKELYNEMIARGITPTIFTY 279
Score = 119 bits (298), Expect = 8e-27
Identities = 76/255 (29%), Positives = 127/255 (49%), Gaps = 11/255 (4%)
Frame = -3
Query: 733 SGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQ--- 563
+G P T +N + K AL + M++ +++ + ++ GL K +
Sbjct: 130 NGCQPDAVTYGPVLNIMCKQGKTSHALDLLRQMEERKIKLNVVQYSIIIDGLCKDGKLDD 189
Query: 562 ------HLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLIS 401
+E + +Y+ I GLC +G+ +LLR+M+ N++T+ LI
Sbjct: 190 ALNLFKEMETKEIKADVITYSTLIGGLCKDGRWNDGAELLRDMITRKIIPNVVTFSALID 249
Query: 400 RLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICP 221
K GK+ EA L M + I +I TY+ LI+GLC R++E +L M +G P
Sbjct: 250 SFVKEGKLVEAKELYNEMIARGITPTIFTYNSLIEGLCMEKRLDEANKMLDLMVSKGCDP 309
Query: 220 DRVTYNILINACTRSGNIDEGLKVLNR--THDNSSNAVTYSCVINALLKAGRWIEAIELL 47
D VT+NILIN ++ +D GL++ + ++ VTYS +I+ L++G+ A EL
Sbjct: 310 DIVTFNILINGYCKANLVDRGLELFRKMSLRGMVADTVTYSTLIHGFLQSGKLNVAKELF 369
Query: 46 HDMEVQGIHPDVVTY 2
+M +G+ PD VTY
Sbjct: 370 QEMVSRGVRPDAVTY 384
Score = 91.7 bits (226), Expect = 3e-17
Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 2/183 (1%)
Frame = -3
Query: 544 VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAM 365
+TP +YN I GLC+E +L A +L MV+ G +I+T+ LI+ CK+ V +
Sbjct: 272 ITPTIFTYNSLIEGLCMEKRLDEANKMLDLMVSKGCDPDIVTFNILINGYCKANLVDRGL 331
Query: 364 ILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINAC 185
L + M + + A +TYS LI G + ++ L +M G+ PD VTY IL++
Sbjct: 332 ELFRKMSLRGMVADTVTYSTLIHGFLQSGKLNVAKELFQEMVSRGVRPDAVTYAILLDGL 391
Query: 184 TRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDV 11
+G ++ L++ + + + Y+ +I+ + + +A +L + ++G+ P+V
Sbjct: 392 CDNGELENALEIFEKMEKSKLGFDIAIYNIIIHGMCNGSKVDDAWDLFCSLPLKGVKPNV 451
Query: 10 VTY 2
TY
Sbjct: 452 KTY 454
Score = 88.6 bits (218), Expect = 4e-16
Identities = 60/253 (23%), Positives = 117/253 (46%), Gaps = 11/253 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSR----- 566
G P+ T S + + D A + M G D N L+ G K+
Sbjct: 271 GITPTIFTYNSLIEGLCMEKRLDEANKMLDLMVSKGCDPDIVTFNILINGYCKANLVDRG 330
Query: 565 ----QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
+ + + +Y+ I G GKL A +L +EMV+ G + +TY L+
Sbjct: 331 LELFRKMSLRGMVADTVTYSTLIHGFLQSGKLNVAKELFQEMVSRGVRPDAVTYAILLDG 390
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LC +G+++ A+ + + M++ + I Y+I+I G+C S++++ + L + +G+ P+
Sbjct: 391 LCDNGELENALEIFEKMEKSKLGFDIAIYNIIIHGMCNGSKVDDAWDLFCSLPLKGVKPN 450
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLH 44
TY ++I + G++ E + + ++ + + TY+ +I A L I ++EL+
Sbjct: 451 VKTYTVMIAGLCKKGSLSEADLLFRKMGEDGIAPDDCTYNTLIRAHLGGSGRITSVELIE 510
Query: 43 DMEVQGIHPDVVT 5
+M+ G D T
Sbjct: 511 EMKSCGFSADAST 523
Score = 88.6 bits (218), Expect = 4e-16
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 11/231 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSR----- 566
G P T +N + + N D L M G DT ++L+ G +S
Sbjct: 306 GCDPDIVTFNILINGYCKANLVDRGLELFRKMSLRGMVADTVTYSTLIHGFLQSGKLNVA 365
Query: 565 ----QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
Q + + V P +Y + + GLC G+L A+++ +M + G +I Y +I
Sbjct: 366 KELFQEMVSRGVRPDAVTYAILLDGLCDNGELENALEIFEKMEKSKLGFDIAIYNIIIHG 425
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
+C KV +A L + K + ++ TY+++I GLC+ + E +L KM ++GI PD
Sbjct: 426 MCNGSKVDDAWDLFCSLPLKGVKPNVKTYTVMIAGLCKKGSLSEADLLFRKMGEDGIAPD 485
Query: 217 RVTYNILINACTRSGNIDEGLKVLN--RTHDNSSNAVTYSCVINALLKAGR 71
TYN LI A ++++ ++ S++A T VI+ +L +GR
Sbjct: 486 DCTYNTLIRAHLGGSGRITSVELIEEMKSCGFSADASTIKMVID-MLSSGR 535
Score = 72.0 bits (175), Expect = 1e-10
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 2/138 (1%)
Frame = -3
Query: 409 LISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEG 230
L S + K+ + + L K M+ + I +I + +I+I+ CR+ + F +L K+ K G
Sbjct: 2 LFSAVAKTKRYDLVLDLSKQMEFQGIAHNIYSLNIMINCFCRLRKPSSAFSVLGKILKLG 61
Query: 229 ICPDRVTYNILINACTRSGNIDEGLKVLNR--THDNSSNAVTYSCVINALLKAGRWIEAI 56
PD VT+N LIN G + E + +++R + + N +T + +IN + G+ EA+
Sbjct: 62 YEPDTVTFNTLINGLCLEGRVSEAVNLVDRMVEMELTPNLITLNTLINGVCLKGKVSEAV 121
Query: 55 ELLHDMEVQGIHPDVVTY 2
+L+ M G PD VTY
Sbjct: 122 DLIGRMVDNGCQPDAVTY 139
>NP_001031033.1 Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis
thaliana] Q9LPX2.1 RecName: Full=Pentatricopeptide
repeat-containing protein At1g12775, mitochondrial;
Flags: Precursor AAF78482.1 Contains similarity to an
unknown protein F16M19.7 gi|6598837 from Arabidopsis
thaliana BAC F16M19 gb|AC010795 and contains multiple
PPR PF|01535 repeats. EST gb|AI999079 comes from this
gene [Arabidopsis thaliana] AEE28927.1 Pentatricopeptide
repeat (PPR) superfamily protein [Arabidopsis thaliana]
Length = 644
Score = 150 bits (379), Expect = 1e-37
Identities = 96/290 (33%), Positives = 148/290 (51%), Gaps = 18/290 (6%)
Frame = -3
Query: 817 NKYYSRVSKVTE-------CKDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDA 659
N+ +S ++K + CK +S G S TL +N F R K
Sbjct: 92 NRLFSAIAKTKQYELVLALCKQMESK----------GIAHSIYTLSIMINCFCRCRKLSY 141
Query: 658 ALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLENLSVT---------PHFTSYNLAIL 506
A + + KLG+ DT + N+LL GL + E L + P + N +
Sbjct: 142 AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201
Query: 505 GLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINA 326
GLCL GK+ A+ L+ MV GF N +TYG +++ +CKSG+ AM L++ M+E++I
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 325 SIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVL 146
+ YSI+IDGLC+ ++ F L +M +G D +TYN LI +G D+G K+L
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 145 NR--THDNSSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
S N VT+S +I++ +K G+ EA +LL +M +GI P+ +TY
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Score = 115 bits (288), Expect = 2e-25
Identities = 71/255 (27%), Positives = 127/255 (49%), Gaps = 11/255 (4%)
Frame = -3
Query: 733 SGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQ--- 563
+G P+ T +N ++ + A+ + M++ ++D + ++ GL K
Sbjct: 222 TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDN 281
Query: 562 ------HLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLIS 401
+E +YN I G C G+ LLR+M+ N++T+ LI
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Query: 400 RLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICP 221
K GK++EA L+K M ++ I + ITY+ LIDG C+ +R+EE ++ M +G P
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 220 DRVTYNILINACTRSGNIDEGLKVLNRTHDNS--SNAVTYSCVINALLKAGRWIEAIELL 47
D +T+NILIN ++ ID+GL++ +N VTY+ ++ ++G+ A +L
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 46 HDMEVQGIHPDVVTY 2
+M + + PD+V+Y
Sbjct: 462 QEMVSRRVRPDIVSY 476
Score = 92.0 bits (227), Expect = 3e-17
Identities = 64/253 (25%), Positives = 122/253 (48%), Gaps = 11/253 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P+ T S ++ F + N+ + A+ V M G D N L+ G K+ + +
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L V + +YN + G C GKL A L +EMV+ +I++Y L+
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LC +G++++A+ + +++ + I Y I+I G+C S++++ + L + +G+ D
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHD--NSSNAVTYSCVINALLKAGRWIEAIELLH 44
YNI+I+ R ++ + + + + ++ + +TY+ +I A L A EL+
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIE 602
Query: 43 DMEVQGIHPDVVT 5
+M+ G DV T
Sbjct: 603 EMKSSGFPADVST 615
Score = 87.8 bits (216), Expect = 8e-16
Identities = 47/207 (22%), Positives = 104/207 (50%), Gaps = 2/207 (0%)
Frame = -3
Query: 616 VDTTVTNSLLPGLPKSRQHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGF 437
+D+ V L + + + + P+ +YN I G C E +L A+ ++ M++ G
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 436 GANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFM 257
+I+T+ LI+ CK+ ++ + + L + M + + A+ +TY+ L+ G C+ ++E
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 256 LLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDNSS--NAVTYSCVINALL 83
L +M + PD V+Y IL++ +G +++ L++ + + + Y +I+ +
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 82 KAGRWIEAIELLHDMEVQGIHPDVVTY 2
A + +A +L + ++G+ D Y
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAY 546
Score = 78.6 bits (192), Expect = 1e-12
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Frame = -3
Query: 475 AMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILID 296
A+DL R+M+ + ++ + L S + K+ + + + L K M+ K I SI T SI+I+
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 295 GLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHD--NSS 122
CR ++ F + K+ K G PD V +N L+N + E L++++R + +
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 121 NAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+T + ++N L G+ +A+ L+ M G P+ VTY
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231
>4WSL_A Chain A, Crystal Structure Of Designed Cppr-polyc Protein
Length = 303
Score = 144 bits (363), Expect = 1e-37
Identities = 86/254 (33%), Positives = 139/254 (54%), Gaps = 11/254 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSR----- 566
G +PS T + ++ + + + AL M++ G N+L+ GL K+
Sbjct: 33 GIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEA 92
Query: 565 ----QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
+ ++ + P +YN I GL G+L A++L EM G +++TY LIS
Sbjct: 93 LELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISG 152
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
L K+G+++EA+ L + M EK I S++TY+ LI GL + R+EE L +M ++GI P
Sbjct: 153 LGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPS 212
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDNS--SNAVTYSCVINALLKAGRWIEAIELLH 44
VTYN LI+ ++G ++E L++ + + VTY+ +I+ L KAGR EA+EL
Sbjct: 213 VVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFE 272
Query: 43 DMEVQGIHPDVVTY 2
+M+ +GI P VVTY
Sbjct: 273 EMKEKGIVPSVVTY 286
Score = 135 bits (341), Expect = 2e-34
Identities = 78/210 (37%), Positives = 122/210 (58%), Gaps = 11/210 (5%)
Frame = -3
Query: 598 NSLLPGLPKSR---------QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVN 446
N+L+ GL K+ + ++ + P +YN I GL G+L A++L EM
Sbjct: 7 NTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKE 66
Query: 445 NGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEE 266
G +++TY LIS L K+G+++EA+ L + M EK I S++TY+ LI GL + R+EE
Sbjct: 67 KGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEE 126
Query: 265 GFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDNS--SNAVTYSCVIN 92
L +M ++GI P VTYN LI+ ++G ++E L++ + + VTY+ +I+
Sbjct: 127 ALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLIS 186
Query: 91 ALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
L KAGR EA+EL +M+ +GI P VVTY
Sbjct: 187 GLGKAGRLEEALELFEEMKEKGIVPSVVTY 216
Score = 130 bits (326), Expect = 3e-32
Identities = 72/177 (40%), Positives = 109/177 (61%), Gaps = 2/177 (1%)
Frame = -3
Query: 526 SYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*M 347
+YN I GL G+L A++L EM G +++TY LIS L K+G+++EA+ L + M
Sbjct: 5 TYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEM 64
Query: 346 DEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNI 167
EK I S++TY+ LI GL + R+EE L +M ++GI P VTYN LI+ ++G +
Sbjct: 65 KEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRL 124
Query: 166 DEGLKVLNRTHDNS--SNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+E L++ + + VTY+ +I+ L KAGR EA+EL +M+ +GI P VVTY
Sbjct: 125 EEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTY 181
Score = 111 bits (278), Expect = 3e-25
Identities = 61/145 (42%), Positives = 92/145 (63%), Gaps = 2/145 (1%)
Frame = -3
Query: 430 NILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLL 251
N +TY LIS L K+G+++EA+ L + M EK I S++TY+ LI GL + R+EE L
Sbjct: 2 NSVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELF 61
Query: 250 TKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNRTHDNS--SNAVTYSCVINALLKA 77
+M ++GI P VTYN LI+ ++G ++E L++ + + VTY+ +I+ L KA
Sbjct: 62 EEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKA 121
Query: 76 GRWIEAIELLHDMEVQGIHPDVVTY 2
GR EA+EL +M+ +GI P VVTY
Sbjct: 122 GRLEEALELFEEMKEKGIVPSVVTY 146
Score = 105 bits (263), Expect = 4e-23
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSR----- 566
G +PS T + ++ + + + AL M++ G N+L+ GL K+
Sbjct: 103 GIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEA 162
Query: 565 ----QHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
+ ++ + P +YN I GL G+L A++L EM G +++TY LIS
Sbjct: 163 LELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISG 222
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
L K+G+++EA+ L + M EK I S++TY+ LI GL + R+EE L +M ++GI P
Sbjct: 223 LGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPS 282
Query: 217 RVTYNILINACTRSG 173
VTYN LI+ ++G
Sbjct: 283 VVTYNTLISGLGKAG 297
>XP_006418847.1 hypothetical protein EUTSA_v10002441mg [Eutrema salsugineum]
ESQ37283.1 hypothetical protein EUTSA_v10002441mg
[Eutrema salsugineum]
Length = 621
Score = 149 bits (377), Expect = 2e-37
Identities = 89/283 (31%), Positives = 151/283 (53%), Gaps = 11/283 (3%)
Frame = -3
Query: 817 NKYYSRVSKVTECKDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGAVAA 638
NK +S V++ K D ++ G F TL +N F R +K D+A +
Sbjct: 76 NKLFSAVART---KQYDLVLAFCKQMESKGIAHDFYTLNIMINCFCRKSKLDSAFSVLGK 132
Query: 637 MQKLGFRVDTTVTNSLLPGLPKSRQHLENLSV---------TPHFTSYNLAILGLCLEGK 485
KLG +T ++L+ G + E +S+ +P+ + N I GLCL+GK
Sbjct: 133 ALKLGHEPNTVTFSTLVNGFCLQGRVSEAVSLVDRMVAMKHSPNLITLNTLINGLCLKGK 192
Query: 484 LLAAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSI 305
+ AMDL+ M NG N +TYG +++R+CKS A+ L++ M+++++ A + Y++
Sbjct: 193 VFEAMDLIDRMFENGCEPNEVTYGPILNRMCKSENTGLALDLLEKMEKRNVKAGLFQYNV 252
Query: 304 LIDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVL-NRTHDN 128
+IDGLC+ ++ L +M +GI D +TYN L+ G ++G ++L + T N
Sbjct: 253 VIDGLCKDGNFDDALKLFNEMESKGIKADVITYNSLVGGLCNDGRWNDGAQMLKDMTRKN 312
Query: 127 -SSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+ N +T++ +I+ +K G+ IEA EL +M +GI PD +TY
Sbjct: 313 ITPNIITFTALIDVFVKEGKLIEAKELYDEMITRGIEPDTITY 355
Score = 107 bits (267), Expect = 1e-22
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 11/242 (4%)
Frame = -3
Query: 694 MNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKS------RQHLENLS---V 542
++ + D AL M+ G + D NSL+ GL Q L++++ +
Sbjct: 254 IDGLCKDGNFDDALKLFNEMESKGIKADVITYNSLVGGLCNDGRWNDGAQMLKDMTRKNI 313
Query: 541 TPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMI 362
TP+ ++ I EGKL+ A +L EM+ G + +TY +LI CK ++ EA
Sbjct: 314 TPNIITFTALIDVFVKEGKLIEAKELYDEMITRGIEPDTITYSSLIDGFCKENRLDEANQ 373
Query: 361 LMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACT 182
L+ M K + I+TYSILI+ C+ +R+++G L ++ + G+ D VTYN L+
Sbjct: 374 LLDLMVSKGCDPDIVTYSILINSYCKANRVDDGMKLFREISRRGLVADTVTYNTLVQGFC 433
Query: 181 RSGNIDEGLKVLNR--THDNSSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVV 8
SGN+ ++ + + +TY ++ L G+ +A+E+ M+ I +
Sbjct: 434 HSGNVKAAQELFQEMVSRGVPPSVITYGILLEGLCNYGKLEKALEVFELMQKSKITLGIC 493
Query: 7 TY 2
Y
Sbjct: 494 IY 495
Score = 105 bits (262), Expect = 7e-22
Identities = 63/253 (24%), Positives = 120/253 (47%), Gaps = 11/253 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQ---- 563
G P T S ++ F + N+ D A + M G D + L+ K+ +
Sbjct: 347 GIEPDTITYSSLIDGFCKENRLDEANQLLDLMVSKGCDPDIVTYSILINSYCKANRVDDG 406
Query: 562 -----HLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
+ + +YN + G C G + AA +L +EMV+ G +++TYG L+
Sbjct: 407 MKLFREISRRGLVADTVTYNTLVQGFCHSGNVKAAQELFQEMVSRGVPPSVITYGILLEG 466
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LC GK+++A+ + + M + I I Y+I+I G+C ++++ + L + + + PD
Sbjct: 467 LCNYGKLEKALEVFELMQKSKITLGICIYNIIIHGMCNAGKVDDAWGLFCSLPLKEVKPD 526
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDNS--SNAVTYSCVINALLKAGRWIEAIELLH 44
+TYN++I + G++ E + + D+ + TY+ +I A L+ I ++EL+
Sbjct: 527 GITYNVMIGGLCKKGSLSEAELLFRKMKDDGLPPDHCTYNILIRANLRGSSIITSVELIE 586
Query: 43 DMEVQGIHPDVVT 5
+M+ D T
Sbjct: 587 EMKKLRFSADTST 599
Score = 73.9 bits (180), Expect = 4e-11
Identities = 46/177 (25%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Frame = -3
Query: 526 SYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*M 347
S+ + + ++ K A++L M+ + ++ + L S + ++ + + K M
Sbjct: 39 SFRVRLKSETVDIKANDAVELFGSMIRSRPLPSLAEFNKLFSAVARTKQYDLVLAFCKQM 98
Query: 346 DEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNI 167
+ K I T +I+I+ CR S+++ F +L K K G P+ VT++ L+N G +
Sbjct: 99 ESKGIAHDFYTLNIMINCFCRKSKLDSAFSVLGKALKLGHEPNTVTFSTLVNGFCLQGRV 158
Query: 166 DEGLKVLNR--THDNSSNAVTYSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
E + +++R +S N +T + +IN L G+ EA++L+ M G P+ VTY
Sbjct: 159 SEAVSLVDRMVAMKHSPNLITLNTLINGLCLKGKVFEAMDLIDRMFENGCEPNEVTY 215
>XP_006417216.1 hypothetical protein EUTSA_v10007095mg [Eutrema salsugineum]
ESQ35569.1 hypothetical protein EUTSA_v10007095mg
[Eutrema salsugineum]
Length = 617
Score = 148 bits (374), Expect = 4e-37
Identities = 86/276 (31%), Positives = 147/276 (53%), Gaps = 11/276 (3%)
Frame = -3
Query: 796 SKVTECKDNDSSISEHLSTNMSGTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFR 617
S + + K D ++ ++G T +N F R+ K AA +A + KLG++
Sbjct: 76 SGIAKTKQYDLVLALSKQMELNGITHDIYTFNIMINCFCRSGKISAAFSVLAKVIKLGYK 135
Query: 616 VDTTVTNSLLPGLPKSRQHLENLSVT---------PHFTSYNLAILGLCLEGKLLAAMDL 464
DTT N+LL GL + E + + P+ + + + GLCL+G + A++L
Sbjct: 136 PDTTTFNTLLNGLCLVGRVSEAVELVDRMVETEHMPNLITLSTLVNGLCLKGSVSEAVEL 195
Query: 463 LREMVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCR 284
+ MV NG + TYG +++R+CKSGK AM L+K M+ + IN ++ Y+I+ID LC+
Sbjct: 196 IDRMVENGCQPDAFTYGPILNRICKSGKTALAMDLLKKMEGRKINLGVVHYNIVIDSLCK 255
Query: 283 ISRIEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNR--THDNSSNAVT 110
+ L +M +GI D +TY LI ++ D+G ++L T + + T
Sbjct: 256 DGSFDNALNLFNEMETKGIKADVITYTSLIGGLCKADRWDDGAQLLRDMITRKITPDVFT 315
Query: 109 YSCVINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
++ +I++ +K G+ +EA EL +M+ +GI PD +TY
Sbjct: 316 FNALIDSFVKEGKLVEANELYKEMDQRGISPDTITY 351
Score = 106 bits (265), Expect = 3e-22
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 13/273 (4%)
Frame = -3
Query: 781 CKDNDSSISEHLSTNMSGTLPSFSTLLSSM--NSFTRTNKHDAALGAVAAMQKLGFRVDT 608
CK ++++ L M G + + ++ +S + D AL M+ G + D
Sbjct: 219 CKSGKTALAMDLLKKMEGRKINLGVVHYNIVIDSLCKDGSFDNALNLFNEMETKGIKADV 278
Query: 607 TVTNSLLPGLPKS------RQHLENL---SVTPHFTSYNLAILGLCLEGKLLAAMDLLRE 455
SL+ GL K+ Q L ++ +TP ++N I EGKL+ A +L +E
Sbjct: 279 ITYTSLIGGLCKADRWDDGAQLLRDMITRKITPDVFTFNALIDSFVKEGKLVEANELYKE 338
Query: 454 MVNNGFGANILTYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISR 275
M G + +TY +LI+ C ++ EA ++ M K + +++TY+ LI+ C+ +R
Sbjct: 339 MDQRGISPDTITYTSLINGFCMKNRLDEANQMLDLMVSKGCDPNVVTYNSLINAYCKANR 398
Query: 274 IEEGFMLLTKMHKEGICPDRVTYNILINACTRSGNIDEGLKVLNR--THDNSSNAVTYSC 101
+++G L KM G+ D VTYN LI ++SG I+ ++ + + +TY
Sbjct: 399 VDDGLELFRKMSLRGVVADTVTYNTLIKGFSQSGKINVAKELFQEMVSRGVPPSILTYGI 458
Query: 100 VINALLKAGRWIEAIELLHDMEVQGIHPDVVTY 2
+++ L G +A+E+L M+ + + Y
Sbjct: 459 LLDGLCNNGEVEKALEILGKMQKSKMDLGIAIY 491
Score = 102 bits (255), Expect = 6e-21
Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 11/253 (4%)
Frame = -3
Query: 730 GTLPSFSTLLSSMNSFTRTNKHDAALGAVAAMQKLGFRVDTTVTNSLLPGLPKSRQHLEN 551
G P T S +N F N+ D A + M G + NSL+ K+ + +
Sbjct: 343 GISPDTITYTSLINGFCMKNRLDEANQMLDLMVSKGCDPNVVTYNSLINAYCKANRVDDG 402
Query: 550 LS---------VTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANILTYGNLISR 398
L V +YN I G GK+ A +L +EMV+ G +ILTYG L+
Sbjct: 403 LELFRKMSLRGVVADTVTYNTLIKGFSQSGKINVAKELFQEMVSRGVPPSILTYGILLDG 462
Query: 397 LCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKMHKEGICPD 218
LC +G+V++A+ ++ M + ++ I Y+I++ G+C S++++ + L + +G+ PD
Sbjct: 463 LCNNGEVEKALEILGKMQKSKMDLGIAIYNIILHGMCNASKVDDAWDLFCNLPIKGLKPD 522
Query: 217 RVTYNILINACTRSGNIDEGLKVLNRTHDN--SSNAVTYSCVINALLKAGRWIEAIELLH 44
TY I+I + G++ E + + ++ + + TY+ +I A L+ G + L+
Sbjct: 523 VRTYTIMIGGLCKKGSVSEADLLFKKMKEDEYAPDGCTYNILIRAHLEDGDATISANLIE 582
Query: 43 DMEVQGIHPDVVT 5
+M+ G D T
Sbjct: 583 EMKGCGFCADAST 595
Score = 92.4 bits (228), Expect = 2e-17
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 2/202 (0%)
Frame = -3
Query: 601 TNSLLPGLPKSRQHLENLSVTPHFTSYNLAILGLCLEGKLLAAMDLLREMVNNGFGANIL 422
T +L LP S + +LS SY + ++ K A+DL + MV + N++
Sbjct: 12 TRTLRNALPLSERAFYSLSKEK--VSYRERLRSGTVDIKKDEAVDLFQSMVRSRPLPNVI 69
Query: 421 TYGNLISRLCKSGKVKEAMILMK*MDEKDINASIITYSILIDGLCRISRIEEGFMLLTKM 242
+ NL S + K+ + + L K M+ I I T++I+I+ CR +I F +L K+
Sbjct: 70 DFNNLFSGIAKTKQYDLVLALSKQMELNGITHDIYTFNIMINCFCRSGKISAAFSVLAKV 129
Query: 241 HKEGICPDRVTYNILINACTRSGNIDEGLKVLNR--THDNSSNAVTYSCVINALLKAGRW 68
K G PD T+N L+N G + E +++++R ++ N +T S ++N L G
Sbjct: 130 IKLGYKPDTTTFNTLLNGLCLVGRVSEAVELVDRMVETEHMPNLITLSTLVNGLCLKGSV 189
Query: 67 IEAIELLHDMEVQGIHPDVVTY 2
EA+EL+ M G PD TY
Sbjct: 190 SEAVELIDRMVENGCQPDAFTY 211