BLASTX nr result
ID: Alisma22_contig00008805
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00008805
(264 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAD15534.1 putative retroelement pol polyprotein [Arabidopsis th... 63 1e-09
JAU31149.1 Retrovirus-related Pol polyprotein from transposon TN... 57 2e-08
JAU71494.1 Retrovirus-related Pol polyprotein from transposon TN... 59 3e-08
JAU19233.1 putative mitochondrial protein, partial [Noccaea caer... 56 8e-08
JAU68404.1 Retrovirus-related Pol polyprotein from transposon TN... 57 2e-07
XP_014513532.1 PREDICTED: uncharacterized protein LOC106771965 [... 56 2e-07
JAU47257.1 Retrovirus-related Pol polyprotein from transposon TN... 57 2e-07
JAU23946.1 Retrovirus-related Pol polyprotein from transposon TN... 57 2e-07
JAV00628.1 Retrovirus-related Pol polyprotein from transposon TN... 56 3e-07
XP_016464752.1 PREDICTED: uncharacterized protein LOC107787662 [... 56 3e-07
JAU98984.1 Retrovirus-related Pol polyprotein from transposon TN... 56 3e-07
XP_008372204.1 PREDICTED: uncharacterized protein LOC103435597 [... 55 5e-07
XP_009377992.1 PREDICTED: uncharacterized protein LOC103966547 [... 54 2e-06
KYP62388.1 Retrovirus-related Pol polyprotein from transposon TN... 54 2e-06
XP_013720993.1 PREDICTED: uncharacterized protein LOC106424787 [... 54 2e-06
KYP37955.1 Retrovirus-related Pol polyprotein from transposon TN... 53 2e-06
XP_018453440.1 PREDICTED: uncharacterized protein LOC108824502 [... 54 3e-06
XP_013720608.1 PREDICTED: uncharacterized protein LOC106424399 [... 54 3e-06
KYP74868.1 Retrovirus-related Pol polyprotein from transposon TN... 54 3e-06
ABI34342.1 Polyprotein, putative [Solanum demissum] 54 3e-06
>AAD15534.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1664
Score = 63.2 bits (152), Expect = 1e-09
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Frame = -2
Query: 260 DGLYYLDE----MPKSTEVSALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXX 93
DGLY L++ +P S+ S++ + ++ WH RLGHP S L+ L P
Sbjct: 414 DGLYVLEDTKPSVPLSSHFSSILGNANSESWHARLGHPHSRALKLLLPSTSFKNDECEAC 473
Query: 92 XLGKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
LGK +SV+P+ S++ + FD++HSDVW
Sbjct: 474 ILGKHCKSVFPKSSTIYEK-CFDLIHSDVW 502
>JAU31149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 154
Score = 57.4 bits (137), Expect = 2e-08
Identities = 30/75 (40%), Positives = 42/75 (56%)
Frame = -2
Query: 227 STEVSALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXLGKQTRSVYPRRSS 48
S S+ S+S+ L WH RLGHP S L L P++ LGK +SV+P SS
Sbjct: 15 SCSFSSTSSSIKNLLWHARLGHPHSRALELLLPNVPFKNNECEACILGKHCKSVFP-ISS 73
Query: 47 MSSRHIFDIVHSDVW 3
+ + FD++H+DVW
Sbjct: 74 TTYENCFDLIHTDVW 88
>JAU71494.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 1123
Score = 58.9 bits (141), Expect = 3e-08
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = -2
Query: 260 DGLYYLDEMP----KSTEVSALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXX 93
D LY L++ S S+ S+S+ L WH RLGHP S L L P++
Sbjct: 456 DDLYVLEDTKIVSDLSCSFSSTSSSIKNLLWHARLGHPHSRALELLLPNVSFKNNECEAC 515
Query: 92 XLGKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
LGK +SV+P SS + + FD++H+DVW
Sbjct: 516 ILGKHCKSVFP-ISSTTYENCFDLIHTDVW 544
>JAU19233.1 putative mitochondrial protein, partial [Noccaea caerulescens]
Length = 168
Score = 56.2 bits (134), Expect = 8e-08
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Frame = -2
Query: 254 LYYLDEMPKSTE-------VSALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXX 96
LY L++ +S+ VS + AS + WH RLGHP + L + P++
Sbjct: 67 LYVLEDTKRSSNLSCSFSFVSPVVASANNAIWHARLGHPHARALSLMLPNISFENEQCEA 126
Query: 95 XXLGKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
LGK R+V+P+ S++ + FD+VHSDVW
Sbjct: 127 CILGKHCRTVFPKSSTVYEK-CFDLVHSDVW 156
>JAU68404.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 326
Score = 56.6 bits (135), Expect = 2e-07
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Frame = -2
Query: 254 LYYLDEMPKSTEVSALSASVSTLQ-------WHYRLGHPSSDKLRHLFPDMXXXXXXXXX 96
LY L++ KS+++S +SV + WH RLGHP L+ + P++
Sbjct: 151 LYVLEDTKKSSQLSCSFSSVIPIVAEAKNAIWHARLGHPHYRALKLMLPNVSFDNDSCEA 210
Query: 95 XXLGKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
LGK ++V+P S++ H FD++HSDVW
Sbjct: 211 CILGKHCKTVFPNSSTIYD-HCFDLIHSDVW 240
>XP_014513532.1 PREDICTED: uncharacterized protein LOC106771965 [Vigna radiata var.
radiata]
Length = 218
Score = 55.8 bits (133), Expect = 2e-07
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -2
Query: 257 GLYYLDEMPKSTEVSALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXL-GK 81
GLY+ P+ + V+AL V H R GHP KL+ L P++ GK
Sbjct: 113 GLYHFGSRPRVSCVAALPPKVL----HDRFGHPHLSKLKKLCPELSGLQTLECESCQLGK 168
Query: 80 QTRSVYPRRSSMSSRHIFDIVHSDVW 3
RSV+P+RS + F I+HSDVW
Sbjct: 169 HVRSVFPKRSQLMCTSSFSIIHSDVW 194
>JAU47257.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Noccaea caerulescens]
Length = 1438
Score = 56.6 bits (135), Expect = 2e-07
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Frame = -2
Query: 254 LYYLDEMPKSTEVSALSASVSTLQ-------WHYRLGHPSSDKLRHLFPDMXXXXXXXXX 96
LY L++ KS+++S +SV + WH RLGHP L+ + P++
Sbjct: 464 LYVLEDTKKSSQLSCSFSSVIPIVAEAKNAIWHARLGHPHYRALKLMLPNVSFDNDSCEA 523
Query: 95 XXLGKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
LGK ++V+P S++ H FD++HSDVW
Sbjct: 524 CILGKHCKTVFPNSSTIYD-HCFDLIHSDVW 553
>JAU23946.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Noccaea caerulescens]
Length = 1438
Score = 56.6 bits (135), Expect = 2e-07
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Frame = -2
Query: 254 LYYLDEMPKSTEVSALSASVSTLQ-------WHYRLGHPSSDKLRHLFPDMXXXXXXXXX 96
LY L++ KS+++S +SV + WH RLGHP L+ + P++
Sbjct: 464 LYVLEDTKKSSQLSCSFSSVIPIVAEAKNAIWHARLGHPHYRALKLMLPNVSFDNDSCEA 523
Query: 95 XXLGKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
LGK ++V+P S++ H FD++HSDVW
Sbjct: 524 CILGKHCKTVFPNSSTIYD-HCFDLIHSDVW 553
>JAV00628.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 529
Score = 56.2 bits (134), Expect = 3e-07
Identities = 29/71 (40%), Positives = 41/71 (57%)
Frame = -2
Query: 215 SALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXLGKQTRSVYPRRSSMSSR 36
S++S ++ L WH RLGHP S L L P++ LGK RSV+P SS +
Sbjct: 3 SSVSYTIKNLLWHARLGHPHSRALELLLPNVSFKNNECEACILGKHCRSVFP-ISSTTYE 61
Query: 35 HIFDIVHSDVW 3
+ FD++H+DVW
Sbjct: 62 NCFDLIHTDVW 72
>XP_016464752.1 PREDICTED: uncharacterized protein LOC107787662 [Nicotiana tabacum]
Length = 766
Score = 56.2 bits (134), Expect = 3e-07
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = -2
Query: 263 ADGLYYLDEMPKSTEVSALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXL- 87
+ GLYYL KS A +++ S H RLGHPS KL+ L P +
Sbjct: 223 SQGLYYLS---KSQPHVAFTSAASADLLHNRLGHPSLAKLQKLIPSLFTLSSIECESCQL 279
Query: 86 GKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
GK TR +P+R + + +FDIVHSD+W
Sbjct: 280 GKHTRISFPKRVNNRAISMFDIVHSDIW 307
>JAU98984.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 1379
Score = 56.2 bits (134), Expect = 3e-07
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Frame = -2
Query: 254 LYYLDEMPKSTE-------VSALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXX 96
LY L++ +S+ VS + AS + WH RLGHP + L + P++
Sbjct: 472 LYVLEDTKRSSNLSCSFSFVSPVVASANNAIWHARLGHPHARALSLMLPNISFENEQCEA 531
Query: 95 XXLGKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
LGK R+V+P+ S++ + FD+VHSDVW
Sbjct: 532 CILGKHCRTVFPKSSTVYEK-CFDLVHSDVW 561
>XP_008372204.1 PREDICTED: uncharacterized protein LOC103435597 [Malus domestica]
Length = 1159
Score = 55.5 bits (132), Expect = 5e-07
Identities = 31/86 (36%), Positives = 43/86 (50%)
Frame = -2
Query: 260 DGLYYLDEMPKSTEVSALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXLGK 81
DGLYY+ + + S + WH RL HPS L LFP++ L K
Sbjct: 496 DGLYYISKSXXRGFQXKSNPSQDSQLWHQRLAHPSQPXLSSLFPNLGNDLIQCETCHLSK 555
Query: 80 QTRSVYPRRSSMSSRHIFDIVHSDVW 3
TR + SS +S+ +F++VHSDVW
Sbjct: 556 XTRLPFHSSSSXTSK-VFELVHSDVW 580
>XP_009377992.1 PREDICTED: uncharacterized protein LOC103966547 [Pyrus x
bretschneideri]
Length = 608
Score = 53.9 bits (128), Expect = 2e-06
Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = -2
Query: 260 DGLYYLDEMPKSTEVSALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXLGK 81
DGLYYL + L ++ T WH RL HPSS L LFP + L K
Sbjct: 448 DGLYYLSKSNPRGFQPKLDSTCDTWLWHQRLAHPSSPILSALFPKLGKDDIICETCHLSK 507
Query: 80 QTRSVYPRRSSMS-SRHIFDIVHSDVW 3
TR +SS+S + F++VHSDVW
Sbjct: 508 DTR--LSSKSSLSRTSKCFELVHSDVW 532
>KYP62388.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1362
Score = 53.9 bits (128), Expect = 2e-06
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Frame = -2
Query: 260 DGLYYLDEMPKSTEVSALSASVSTLQ------WHYRLGHPSSDKLRHLFPDM----XXXX 111
+GLY++ P ++ S + S+ST+ WH RLGHP+ + L+HL+PD+
Sbjct: 411 NGLYFVSNSPSKSD-SPQTISLSTVSDSNVFLWHNRLGHPNFNYLKHLYPDLFINKNISS 469
Query: 110 XXXXXXXLGKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
L KQ+R+ YP S+ F ++HSD+W
Sbjct: 470 FRCEHCILAKQSRTNYPSHPYQPSQP-FHLIHSDIW 504
>XP_013720993.1 PREDICTED: uncharacterized protein LOC106424787 [Brassica napus]
Length = 1619
Score = 53.9 bits (128), Expect = 2e-06
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = -2
Query: 254 LYYLD--EMPKSTEVSALSASVS---TLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXX 90
LY+L E P E LS++ L WH RLGHP + + + P M
Sbjct: 394 LYHLQTTEAPSPVESVCLSSTTDRCDNLTWHARLGHPHAKAIELILPSMAFNHLECEACI 453
Query: 89 LGKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
LGK R+V+P S + FD+VHSDVW
Sbjct: 454 LGKHCRTVFP-TSETRYENCFDLVHSDVW 481
>KYP37955.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 193
Score = 52.8 bits (125), Expect = 2e-06
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = -2
Query: 257 GLYYLDEMPKSTEVSALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXL-GK 81
GLYY + P + V+ LS + H RLGHPS KL+ L P + GK
Sbjct: 91 GLYYFEMQPPVSCVAVLSPKLL----HDRLGHPSLSKLKLLVPSLQKLAELGCESCQLGK 146
Query: 80 QTRSVYPRRSSMSSRHIFDIVHSDVW 3
RS +P+++ IF +HSD+W
Sbjct: 147 HVRSSFPKQTDKRCNSIFTTIHSDIW 172
>XP_018453440.1 PREDICTED: uncharacterized protein LOC108824502 [Raphanus sativus]
Length = 656
Score = 53.5 bits (127), Expect = 3e-06
Identities = 37/93 (39%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Frame = -2
Query: 254 LYYLDEMPKSTEVSAL---SASVSTLQWHYRLGHPSSDKLRHLFPDM------XXXXXXX 102
LY LD S+ S S V WH+RLGHPSS KL+HL P +
Sbjct: 554 LYILDTQLASSSSSVSFCGSLKVDGSLWHHRLGHPSSAKLQHLSPHIHIDKSTHLESFHC 613
Query: 101 XXXXLGKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
L KQ R +P ++MSS FD+VH DVW
Sbjct: 614 PVCPLAKQKRLPFPSHNNMSSAP-FDLVHMDVW 645
>XP_013720608.1 PREDICTED: uncharacterized protein LOC106424399 [Brassica napus]
XP_013720609.1 PREDICTED: uncharacterized protein
LOC106424401 [Brassica napus]
Length = 750
Score = 53.5 bits (127), Expect = 3e-06
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = -2
Query: 254 LYYLD--EMPKSTEVSALSASVS---TLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXX 90
LY+L E P E LS++ L WH RLGHP + + + P M
Sbjct: 311 LYHLQTTEAPSLVESVCLSSTTDRCDNLTWHARLGHPHAKAIELILPSMAFNHLECEACI 370
Query: 89 LGKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
LGK R+V+P S + FD+VHSDVW
Sbjct: 371 LGKHCRTVFP-TSETRYENCFDLVHSDVW 398
>KYP74868.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 793
Score = 53.5 bits (127), Expect = 3e-06
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = -2
Query: 260 DGLYYLDEMPKSTEVSALSASVSTLQWHYRLGHPSSDKLRHLFPDM----XXXXXXXXXX 93
+GLYYL+ + ++ AL+ T QWH RLGHPS ++ LFP +
Sbjct: 331 EGLYYLESGSQHSKGEALAHF--TRQWHKRLGHPSFSYIKRLFPSLFTCCNIFYFKCETC 388
Query: 92 XLGKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
+ K R+++P +S ++ F IVHSDVW
Sbjct: 389 VMAKSHRAIFPINNSRANAP-FSIVHSDVW 417
>ABI34342.1 Polyprotein, putative [Solanum demissum]
Length = 1054
Score = 53.5 bits (127), Expect = 3e-06
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -2
Query: 263 ADGLYYLDEMPKSTEVSALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXL- 87
+ GLYYL S ++A S + S H RLGHPS KL+ + P +
Sbjct: 225 SQGLYYLTS---SNSLTACSITDSPDLIHKRLGHPSLSKLQKMVPSLSSLSTLDCESCQL 281
Query: 86 GKQTRSVYPRRSSMSSRHIFDIVHSDVW 3
GK TR+ + R + S IF +VHSD+W
Sbjct: 282 GKHTRATFSRSTEGRSESIFSLVHSDIW 309