BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00008752
         (3895 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010928876.1 PREDICTED: DNA topoisomerase 1 alpha [Elaeis guin...  1012   0.0  
XP_010913963.1 PREDICTED: DNA topoisomerase 1 alpha-like isoform...  1006   0.0  
XP_008782916.2 PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase...   998   0.0  
XP_008798752.1 PREDICTED: DNA topoisomerase 1-like [Phoenix dact...   993   0.0  
JAT43915.1 DNA topoisomerase 1, partial [Anthurium amnicola] JAT...   982   0.0  
XP_009411876.1 PREDICTED: DNA topoisomerase 1 [Musa acuminata su...   973   0.0  
XP_009398771.1 PREDICTED: DNA topoisomerase 1 [Musa acuminata su...   970   0.0  
XP_010252639.1 PREDICTED: DNA topoisomerase 1 alpha-like [Nelumb...   968   0.0  
XP_020110486.1 DNA topoisomerase 1 alpha-like isoform X1 [Ananas...   967   0.0  
XP_010266803.1 PREDICTED: DNA topoisomerase 1 alpha-like [Nelumb...   965   0.0  
OAY66604.1 DNA topoisomerase 1 [Ananas comosus]                       959   0.0  
XP_020111558.1 DNA topoisomerase 1 beta-like isoform X1 [Ananas ...   958   0.0  
ONK79065.1 uncharacterized protein A4U43_C01F2540 [Asparagus off...   957   0.0  
XP_009407901.1 PREDICTED: DNA topoisomerase 1-like isoform X2 [M...   955   0.0  
KMZ57043.1 DNA topoisomerase 1 [Zostera marina]                       947   0.0  
NP_001157806.2 topoisomerase I [Zea mays] AQK50787.1 DNA topoiso...   943   0.0  
ACS44671.1 DNA topoisomerase I [Zea mays]                             942   0.0  
AQK50797.1 DNA topoisomerase 1 beta [Zea mays]                        939   0.0  
XP_006659124.1 PREDICTED: DNA topoisomerase 1-like [Oryza brachy...   938   0.0  
EOY12189.1 DNA topoisomerase I alpha isoform 1 [Theobroma cacao]...   937   0.0  

>XP_010928876.1 PREDICTED: DNA topoisomerase 1 alpha [Elaeis guineensis]
          Length = 956

 Score = 1012 bits (2616), Expect = 0.0
 Identities = 553/903 (61%), Positives = 617/903 (68%), Gaps = 49/903 (5%)
 Frame = -3

Query: 3110 DQNSPNCENTYSRGNKEVSISNLLKSDQVDMVLTSKKVEGLPDQPKVSMNKPPFKT---- 2943
            ++++ N  N+  + NK  S           ++  S     LPD+ K    K P       
Sbjct: 58   EKSAMNHGNSNFQKNKITSTVKAPSEKSKSIIAGSNSRIALPDRSKHLPEKKPTSNSRET 117

Query: 2942 -------AEPEDSDVDSDDYKPLSFRRSAAPVGINKDSXXXXXXXXPGD----------- 2817
                   A+ E SD DSDD KPLS R +AA +   K++                      
Sbjct: 118  MHLDNICADAESSD-DSDDDKPLSHRLNAASMVFQKNNSMHPEKVVNHSSEHKLATSSKD 176

Query: 2816 -----------ETXXXXXXDKPLSFKIPTSGSGGPNNRSLPEKKLISSQRPIT------- 2691
                       E       DKPLS K   S S    N SL  KK++ S R  +       
Sbjct: 177  KMDLDKPCRKREDSDDSDDDKPLSSKF--SSSVVEKNSSLHSKKVLESPRHASPSAQKVQ 234

Query: 2690 -SISVSMNDXXXXXXXXXXXXSRGGRIDESSDSDGDHKPLAARFQ-NGSFKKGPLASGKP 2517
             S     +D             +      +  SD D KPLA + + NGS KKG     + 
Sbjct: 235  ESTKEDSDDSEDDKPLLFRFQPKSSGGASTKISDDDEKPLAFKVKPNGSIKKGTSNELRF 294

Query: 2516 VSGLAKRPSTDDDKSALASNKKQKYSAGLTQNKIKQE-------HSDDDYSPISQTIXXX 2358
              G  KRP  D +     S KK K S      K+KQE         D+D  PISQ I   
Sbjct: 295  PKGANKRPLGDTNNPIDYSIKKAKVSGSSYHEKVKQEVVEKKTDTDDNDRIPISQRIKKS 354

Query: 2357 XXXXXXXXXXXKVLKKAISKPFKKEVDXXXXXXXXXXXXXXXKVPPGSGEGQKWTTLEHS 2178
                        V+KK      KK+                 KVPPGSG GQKWTTLEH+
Sbjct: 355  GSSDSKSSTNK-VMKKITGSLLKKDSKKMKKALKNSKFSKSLKVPPGSGGGQKWTTLEHN 413

Query: 2177 GVIFPPSYKPHGVKMLYDGKPVDLTPEQEEVATMFAVMKDTDYAAKKTFITNFWNDWKKV 1998
            G+IFPP+Y PHGVKMLY+G+PVDLTPEQEEVATMFAVMKDTDYA K  FI NFWNDWK++
Sbjct: 414  GLIFPPTYVPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYATKPKFIENFWNDWKRI 473

Query: 1997 LGKNHVIKDFQRCDFTPIYEWHLKEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVK 1818
            LGKNHVIK F+ CDFTPIYEWH +EKEKKKQMS                KYMWA+VDGVK
Sbjct: 474  LGKNHVIKKFELCDFTPIYEWHQREKEKKKQMSAEEKKALKEEKMKKEEKYMWAVVDGVK 533

Query: 1817 EKVGNFRVEPPGLFRGRGEHPKMGKLKKRIYPHDITINIGKGAPIPECPIPGERWKEIKH 1638
            EKVGNFRVEPP LFRGRGEHPKMGKLKKR+ P DITINIGKGAPIPECP+PGERWKE+KH
Sbjct: 534  EKVGNFRVEPPALFRGRGEHPKMGKLKKRVRPSDITINIGKGAPIPECPVPGERWKEVKH 593

Query: 1637 DNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKDYIQTIRANYTKDF 1458
            DNTVTWLAFWNDPINPKE KYVFLAASSSLKGQSDKEKYEK+R LKDYI  IRANYT+DF
Sbjct: 594  DNTVTWLAFWNDPINPKECKYVFLAASSSLKGQSDKEKYEKARLLKDYIDNIRANYTRDF 653

Query: 1457 TSKDESRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKIQFDFLG 1278
            TSKD ++RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV LVPPNK+QFDFLG
Sbjct: 654  TSKDATKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVVLVPPNKLQFDFLG 713

Query: 1277 KDSIRYFNTVDVEPAVYKAIGEFRXXXXXXXXXXKDSEDLFDKLDTSKLNAHLKELMPGL 1098
            KDSIRYFNTV+VEP VYKAIGEFR           D +DLFD LDTSKLNAHLKELMPGL
Sbjct: 714  KDSIRYFNTVEVEPPVYKAIGEFRTARKSDGSKKGDGDDLFDLLDTSKLNAHLKELMPGL 773

Query: 1097 TAKVFRTYNASITLDQMLNKETKDGTVQEKIAVYQTANKEVAIICNHQRSVSKTHDAQMS 918
            TAKVFRTYNASITLD +LNK+TKDGT+ EKIAVYQ ANKEVAIICNHQRSVSK+HDAQMS
Sbjct: 774  TAKVFRTYNASITLDDILNKKTKDGTLPEKIAVYQHANKEVAIICNHQRSVSKSHDAQMS 833

Query: 917  RLNEKIEELKAQREELKEDLNRARKGKPPLKDAEGKPKRNMAPEMLAKKLSQVDAKIEKM 738
            RLNEKI +LKAQREELK DL+RARKGKPPLK+ EGKPKRN++PE L KK++Q+DAKIEKM
Sbjct: 834  RLNEKIADLKAQREELKVDLSRARKGKPPLKNGEGKPKRNLSPEALEKKIAQMDAKIEKM 893

Query: 737  ELDKKIKDDLKTVALGTSKINYLDPRITVAWCKRYEVPIEKIFNKSLLAKFTWAMDADPS 558
            ELDKK+K+DLKTVALGTSKINYLDPRI+VAWCKR+EVPIEKIFNKSLLAKFTWAMD DPS
Sbjct: 894  ELDKKVKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPS 953

Query: 557  FRF 549
            FRF
Sbjct: 954  FRF 956


>XP_010913963.1 PREDICTED: DNA topoisomerase 1 alpha-like isoform X1 [Elaeis
            guineensis] XP_019704056.1 PREDICTED: DNA topoisomerase 1
            alpha-like isoform X1 [Elaeis guineensis]
          Length = 951

 Score = 1006 bits (2600), Expect = 0.0
 Identities = 559/905 (61%), Positives = 626/905 (69%), Gaps = 51/905 (5%)
 Frame = -3

Query: 3110 DQNSPNCENTYSRGNKEVSISNLLKSDQVDMVLTSKKVEGLPDQPK-------VSMNKPP 2952
            D+ +PN  N+  + NK              ++  S      PDQ K        S N   
Sbjct: 59   DEGTPNYGNSNFQKNKMTCTVKAPSEKSKSIIAGSNSRTSFPDQSKHFAEQKLTSNNNET 118

Query: 2951 FKT----AEPEDSDVDSDDYKPLSFRRSAAPVGINKDSXXXXXXXXPGD----------- 2817
                   A+ E+SD DSDD KPLS R +A  + + K++                      
Sbjct: 119  THLDNFGADAENSD-DSDDDKPLSHRLNAVSMAVQKNNSVHMEKVANHSSEHKLATSCKG 177

Query: 2816 -----------ETXXXXXXDKPLSFKIPTSGSGGPNNRSLPEKKLISSQRPITSISVSM- 2673
                       E       DK LS K  +S     N+ S   K+ + S RP +  S  + 
Sbjct: 178  KMNLDKPCGKIEDSDDSDDDKTLSSKFSSSVVAEKNSFS-QAKRALESPRPTSLSSQKLK 236

Query: 2672 ---------NDXXXXXXXXXXXXSRGGRIDESSDSDGDHKPLAARFQ-NGSFKKGPLASG 2523
                     ++            S GG   + SDS G  KPLA++F+ NGS KK      
Sbjct: 237  EIAKEDSDDSEDDKPLLSRFQTKSTGGASTKLSDSVG--KPLASKFKPNGSIKKETSNEL 294

Query: 2522 KPVSGLAKRPSTDDDKSALASNKKQKYSAGLTQNKIKQE------HSDD-DYSPISQTIX 2364
             P  G  KRP  D +K   +S KK K S      KIKQE      ++DD D+ PI+Q I 
Sbjct: 295  SP-KGANKRPLGDTNKFIYSSIKKAKVSDSSRPIKIKQEVVKKETNTDDYDHIPIAQRIK 353

Query: 2363 XXXXXXXXXXXXXKVLKKAISKPFKKEVDXXXXXXXXXXXXXXXKVPPGSGEGQKWTTLE 2184
                          V+KK  S  FKK+                 KVPPGSG GQKWTTLE
Sbjct: 354  KSGSSDNKSSTNK-VMKKITSSSFKKDGKKMKKAMKDSKFSKSLKVPPGSGGGQKWTTLE 412

Query: 2183 HSGVIFPPSYKPHGVKMLYDGKPVDLTPEQEEVATMFAVMKDTDYAAKKTFITNFWNDWK 2004
            H+GVIFPP+Y+PHGVKMLY+G+PVDLTPEQEEVATMFAVMKDTDYA K  FI NFWNDWK
Sbjct: 413  HNGVIFPPAYQPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYATKPKFIENFWNDWK 472

Query: 2003 KVLGKNHVIKDFQRCDFTPIYEWHLKEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDG 1824
            ++LGK+HVIK F  CDFTPIYEWHL+EKEKKKQMS                KYMWAIVDG
Sbjct: 473  QILGKSHVIKKFDLCDFTPIYEWHLREKEKKKQMSAEEKKALKEEKLKQEEKYMWAIVDG 532

Query: 1823 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIYPHDITINIGKGAPIPECPIPGERWKEI 1644
            VKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI P DITINIGKGAPIPECPIPGERWKE+
Sbjct: 533  VKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKGAPIPECPIPGERWKEV 592

Query: 1643 KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKDYIQTIRANYTK 1464
            KH+NTVTWLAFWNDPINPKEFKYVFLAASS+LKGQSDKEKYEK+R LKDYI  IRANYT+
Sbjct: 593  KHENTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHNIRANYTR 652

Query: 1463 DFTSKDESRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKIQFDF 1284
            DFTSKD ++RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV L+PPNK+QFDF
Sbjct: 653  DFTSKDATKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVVLIPPNKLQFDF 712

Query: 1283 LGKDSIRYFNTVDVEPAVYKAIGEFRXXXXXXXXXXKDSEDLFDKLDTSKLNAHLKELMP 1104
            LGKDSIRYFNTV+VE  VYKAIGEFR           D +DLFD LDTSKLNAHLKELMP
Sbjct: 713  LGKDSIRYFNTVEVELPVYKAIGEFR------TARKSDGDDLFDLLDTSKLNAHLKELMP 766

Query: 1103 GLTAKVFRTYNASITLDQMLNKETKDGTVQEKIAVYQTANKEVAIICNHQRSVSKTHDAQ 924
            GLTAKVFRTYNASITLD +LNKETK+GT+ EKIAVYQ ANKEVAIICNHQRSVSK+HDAQ
Sbjct: 767  GLTAKVFRTYNASITLDDILNKETKEGTLPEKIAVYQHANKEVAIICNHQRSVSKSHDAQ 826

Query: 923  MSRLNEKIEELKAQREELKEDLNRARKGKPPLKDAEGKPKRNMAPEMLAKKLSQVDAKIE 744
            MSRLNEKI +LK QREELK DL+RARKGKPPLKD EGK KRN++ E L KK++Q+D+KIE
Sbjct: 827  MSRLNEKIMDLKTQREELKVDLSRARKGKPPLKDREGKTKRNLSSEALEKKIAQIDSKIE 886

Query: 743  KMELDKKIKDDLKTVALGTSKINYLDPRITVAWCKRYEVPIEKIFNKSLLAKFTWAMDAD 564
            KMELDKKIK+DLKTVALGTSKINYLDPRITVAWCKR+EVPIEKIFNKSLLAKFTWAMD D
Sbjct: 887  KMELDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVD 946

Query: 563  PSFRF 549
            PSFRF
Sbjct: 947  PSFRF 951


>XP_008782916.2 PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Phoenix
            dactylifera]
          Length = 950

 Score =  998 bits (2581), Expect = 0.0
 Identities = 541/847 (63%), Positives = 599/847 (70%), Gaps = 49/847 (5%)
 Frame = -3

Query: 2942 AEPEDSDVDSDDYKPLSFRRSAAPV------GINKDSXXXXXXXXPGD-----------E 2814
            A+ E SD DSDD KPLS R +AA +       ++ DS          D           E
Sbjct: 123  ADAESSD-DSDDDKPLSHRLNAASMVFHRNNSMHADSSEHKLATSSKDKMDLDKPCNKSE 181

Query: 2813 TXXXXXXDKPLSFKIPTSGSGGPNNRSLPEKKLISSQRPITSISVSMNDXXXXXXXXXXX 2634
                   DKPLS K  +S     ++ S   KK+  S R  +  S  + +           
Sbjct: 182  DSDDSDDDKPLSSKFSSSVVVEKSSSS-HAKKVFESPRHTSLSSQKLKE----------- 229

Query: 2633 XSRGGRIDESSDSDGDHKPLAARFQ-------------------------NGSFKKGPLA 2529
                 R  E SD   D +PL +RFQ                         NGS KKG   
Sbjct: 230  -----RTKEDSDDSEDDEPLLSRFQPKSAGGASTKISDDDEKPLASKVKPNGSVKKGTSN 284

Query: 2528 SGKPVSGLAKRPSTDDDKSALASNKKQKYSAGLTQNKIKQE-------HSDDDYSPISQT 2370
              +   G  KRP  D +    +S KK K S      K+KQE         D+D+ PI+Q 
Sbjct: 285  ELRFSKGANKRPLGDTNNRIDSSIKKAKVSDSSYHAKVKQEVVEKKPGTDDNDHIPIAQR 344

Query: 2369 IXXXXXXXXXXXXXXKVLKKAISKPFKKEVDXXXXXXXXXXXXXXXKVPPGSGEGQKWTT 2190
            I              KV+KK    PFKK+                 KVPPGSG GQKWTT
Sbjct: 345  I-KKSGSSDNKSSTNKVMKKITCSPFKKDSKKMKKAMKNSKFSKSLKVPPGSGGGQKWTT 403

Query: 2189 LEHSGVIFPPSYKPHGVKMLYDGKPVDLTPEQEEVATMFAVMKDTDYAAKKTFITNFWND 2010
            LEH+GVIFPP YKPHGV+MLY+G+PVDLTPEQEEVATMFAVMKDTDYA K  FI NFWND
Sbjct: 404  LEHNGVIFPPPYKPHGVRMLYNGQPVDLTPEQEEVATMFAVMKDTDYATKPKFIENFWND 463

Query: 2009 WKKVLGKNHVIKDFQRCDFTPIYEWHLKEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIV 1830
            WK++LGKNHVIK F+ CDFTPIYEWH ++KEK KQMS                KYMWA+V
Sbjct: 464  WKQILGKNHVIKKFELCDFTPIYEWHQRQKEKNKQMSAEEKKALKEDKLKQEEKYMWAVV 523

Query: 1829 DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIYPHDITINIGKGAPIPECPIPGERWK 1650
            DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI P DITINIGKGAPIPECPIPGERWK
Sbjct: 524  DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKGAPIPECPIPGERWK 583

Query: 1649 EIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKDYIQTIRANY 1470
            E+KHDNTVTWLAFWNDPIN KEFKYVFLAASSSLKGQSDKEKYEK+R LKDYI  IRANY
Sbjct: 584  EVKHDNTVTWLAFWNDPINLKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHNIRANY 643

Query: 1469 TKDFTSKDESRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKIQF 1290
            T+DFTSKD ++RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV LVPPNK+QF
Sbjct: 644  TRDFTSKDAAKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVVLVPPNKLQF 703

Query: 1289 DFLGKDSIRYFNTVDVEPAVYKAIGEFRXXXXXXXXXXKDSEDLFDKLDTSKLNAHLKEL 1110
            DFLGKDSIRYFNTV+VEP VYKAIGEFR             +DLFD LDTSKLNAHLKEL
Sbjct: 704  DFLGKDSIRYFNTVEVEPPVYKAIGEFRTARKSHGSKKSGGDDLFDLLDTSKLNAHLKEL 763

Query: 1109 MPGLTAKVFRTYNASITLDQMLNKETKDGTVQEKIAVYQTANKEVAIICNHQRSVSKTHD 930
            MPGLTAKVFRTYNASITLD +LN+ETKDGT+ EKIAVYQ ANKEVAIICNHQRSVSK+HD
Sbjct: 764  MPGLTAKVFRTYNASITLDDILNRETKDGTLPEKIAVYQHANKEVAIICNHQRSVSKSHD 823

Query: 929  AQMSRLNEKIEELKAQREELKEDLNRARKGKPPLKDAEGKPKRNMAPEMLAKKLSQVDAK 750
            AQMSRLN KI ++KAQREELK DL+RARKGKPPLKD EGKPKR M+P++L KK++Q+DAK
Sbjct: 824  AQMSRLNGKIADIKAQREELKVDLSRARKGKPPLKDGEGKPKRIMSPQVLEKKVAQIDAK 883

Query: 749  IEKMELDKKIKDDLKTVALGTSKINYLDPRITVAWCKRYEVPIEKIFNKSLLAKFTWAMD 570
            IEKMELD KIK+DLKTVALGTSKINYLDPRI+VAWCKR+EVPIEKIFNKSLLAKF WAMD
Sbjct: 884  IEKMELDXKIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMD 943

Query: 569  ADPSFRF 549
             DP+FRF
Sbjct: 944  VDPTFRF 950


>XP_008798752.1 PREDICTED: DNA topoisomerase 1-like [Phoenix dactylifera]
          Length = 948

 Score =  993 bits (2568), Expect = 0.0
 Identities = 540/857 (63%), Positives = 610/857 (71%), Gaps = 8/857 (0%)
 Frame = -3

Query: 3095 NCENTYSRGNKEVSISNLLKSDQVDMVLTSKKVEGLPDQPKVSMNKPPFKTAEPEDSDVD 2916
            N  +T  + N  + +  ++       + TS K        K++++KP  K    EDSD D
Sbjct: 142  NAVSTVVQKNNSMHMEKVVNHSSEHKLATSCK-------GKMTLDKPCGKN---EDSD-D 190

Query: 2915 SDDYKPLSFRRSAAPVGINKDSXXXXXXXXPGDETXXXXXXDKPLSFKIPTSGSGGPNNR 2736
            SDD KPLS + S++ V     S            T         LS + P   +   ++ 
Sbjct: 191  SDDDKPLSSKFSSSVVAGKNSSLHAKQALESPRHT--------SLSSQKPKESTKEDSDD 242

Query: 2735 SLPEKKLISSQRPITSISVSMNDXXXXXXXXXXXXSRGGRIDESSDSDGDHKPLAARFQ- 2559
            S  +K L+S  +P ++                     GG   ++S S    KPLA++ + 
Sbjct: 243  SEDDKPLLSRFQPKST---------------------GGASTKNSHS--VEKPLASKVKP 279

Query: 2558 NGSFKKGPLASGKPVSGLAKRPSTDDDKSALASNKKQKYSAGLTQNKIKQE-------HS 2400
            NGS KK       P  G  KRP  D +    +S KK K S      KIKQE         
Sbjct: 280  NGSIKKEASNESNP-KGANKRPLGDTNNPIYSSIKKAKVSDSSHPIKIKQEVVKKETDKD 338

Query: 2399 DDDYSPISQTIXXXXXXXXXXXXXXKVLKKAISKPFKKEVDXXXXXXXXXXXXXXXKVPP 2220
            DDD+ P++Q I              KV+KK  S  FKK+                  VPP
Sbjct: 339  DDDHIPVAQRI-KKSGSSDNKSSTNKVMKKITSSSFKKDGKKMKKALKGSKFSKSLNVPP 397

Query: 2219 GSGEGQKWTTLEHSGVIFPPSYKPHGVKMLYDGKPVDLTPEQEEVATMFAVMKDTDYAAK 2040
            GSG GQKWTTLEH+GVIFPP YKPHGVKMLY+G+ VDLTPEQEEVATMFAVMKDTDYA K
Sbjct: 398  GSGGGQKWTTLEHNGVIFPPPYKPHGVKMLYNGQLVDLTPEQEEVATMFAVMKDTDYATK 457

Query: 2039 KTFITNFWNDWKKVLGKNHVIKDFQRCDFTPIYEWHLKEKEKKKQMSTXXXXXXXXXXXX 1860
              FI NFWNDWK++LGK+HVIK F+ CDFTPIYEWHL+EKEKKKQMS             
Sbjct: 458  PKFIENFWNDWKQILGKSHVIKKFELCDFTPIYEWHLREKEKKKQMSAEEKKALKEEKLK 517

Query: 1859 XXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIYPHDITINIGKGAPIP 1680
               KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI P DITINIGKGAPIP
Sbjct: 518  QEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKGAPIP 577

Query: 1679 ECPIPGERWKEIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLK 1500
            ECP+PGERWKE+KH+NTVTWLAFWNDPINPKEFKYVFLAASS+LKGQSDKEKYEK+R LK
Sbjct: 578  ECPVPGERWKEVKHENTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDKEKYEKARLLK 637

Query: 1499 DYIQTIRANYTKDFTSKDESRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV 1320
            DYI  IRANYT+DFTSKD ++RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV
Sbjct: 638  DYIHNIRANYTRDFTSKDATKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV 697

Query: 1319 ALVPPNKIQFDFLGKDSIRYFNTVDVEPAVYKAIGEFRXXXXXXXXXXKDSEDLFDKLDT 1140
             L+PPNK+QFDFLGKDSIRYFNTV+VE  VYKAIGEFR           D EDLFD LDT
Sbjct: 698  VLIPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGEFR------TARKSDGEDLFDLLDT 751

Query: 1139 SKLNAHLKELMPGLTAKVFRTYNASITLDQMLNKETKDGTVQEKIAVYQTANKEVAIICN 960
            SKLNAHLKELMPGLTAKVFRT+NASITLD +LNKETK+GT+ EKIAVYQ A K+VAIICN
Sbjct: 752  SKLNAHLKELMPGLTAKVFRTFNASITLDDILNKETKEGTLPEKIAVYQHATKQVAIICN 811

Query: 959  HQRSVSKTHDAQMSRLNEKIEELKAQREELKEDLNRARKGKPPLKDAEGKPKRNMAPEML 780
            HQRSVSK+HDAQMSRLNEKI +LK QREELK DL+RARKGKPPLKD EGK KRN++PE L
Sbjct: 812  HQRSVSKSHDAQMSRLNEKIMDLKTQREELKVDLSRARKGKPPLKDREGKTKRNLSPEAL 871

Query: 779  AKKLSQVDAKIEKMELDKKIKDDLKTVALGTSKINYLDPRITVAWCKRYEVPIEKIFNKS 600
             KK++Q+DAKIEKMELDKKIK+DLKTVALGTSKINYLDPRI+VAWCKR+EVPIEKIFNKS
Sbjct: 872  EKKIAQIDAKIEKMELDKKIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKS 931

Query: 599  LLAKFTWAMDADPSFRF 549
            LL KF WAMD DP FRF
Sbjct: 932  LLGKFAWAMDVDPGFRF 948


>JAT43915.1 DNA topoisomerase 1, partial [Anthurium amnicola] JAT66129.1 DNA
            topoisomerase 1, partial [Anthurium amnicola]
          Length = 929

 Score =  982 bits (2538), Expect = 0.0
 Identities = 534/841 (63%), Positives = 601/841 (71%), Gaps = 21/841 (2%)
 Frame = -3

Query: 3008 SKKVEGLPDQPKVSMNKPPFKTAEPEDSDVDSDDYKPLSFRRSAAPVGINKDSXXXXXXX 2829
            S     LP Q K S +            + DSDD KPLSFR SA      K S       
Sbjct: 111  SNNRSALPVQLKRSSSNGTNNVNGDTPDNDDSDDDKPLSFRLSATSATPQKSSSLTKSQG 170

Query: 2828 XPGDETXXXXXXDKPLSFKIPTSGSGGPNNRSLPEKKLISSQRPITSISVSMNDXXXXXX 2649
              G E       +KPLSF++  +  GG  + +L  +K+ SS   + + S S         
Sbjct: 171  --GGENSDDSDDNKPLSFRVSGASLGGQKSNTLNSRKVQSSS--VINPSSSQKSKP---- 222

Query: 2648 XXXXXXSRGGRIDESSDSDGDHKPLAARFQN------------GSFKKGPLASGKPVSGL 2505
                       I + SD   D KPL +RFQ+             S  + PLAS    +G 
Sbjct: 223  ----------EIKKYSDDSEDEKPLFSRFQSKPVLGKSSRTPDDSDDEKPLASRFHQNGS 272

Query: 2504 AKRPSTDDDKSALASNKKQKYSAGLTQNKIKQEHS--------DDDYSPISQTIXXXXXX 2349
             KRP    +KS   SNKK K     T  K+K E +        DDD+ PI+Q        
Sbjct: 273  NKRPFNSVNKSGEPSNKKAKL-LDTTAAKVKCEAAVKKEVNADDDDHIPIAQRTKKLASN 331

Query: 2348 XXXXXXXXKVLKKAISKPFKKEVDXXXXXXXXXXXXXXXKVPPGSGEGQKWTTLEHSGVI 2169
                     V+KK  +  FKK+                 KVPPGSGEGQKWTTL HSGVI
Sbjct: 332  EKQSSTKK-VIKKVTTTSFKKK-KMTKKMMKNSKYSKSFKVPPGSGEGQKWTTLAHSGVI 389

Query: 2168 FPPSYKPHGVKMLYDGKPVDLTPEQEEVATMFAVMKDTDYAAKKTFITNFWNDWKKVLGK 1989
            FPP YKPHG+KMLY+ KPV+LTPEQEEVATMFAVMKDT+YA KK FI NF  DW+ +LG 
Sbjct: 390  FPPPYKPHGIKMLYNRKPVNLTPEQEEVATMFAVMKDTEYATKKIFIDNFMKDWRAILGP 449

Query: 1988 NHVIKDFQRCDFTPIYEWHLKEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKV 1809
            NH+IK F+ CDFTPIYEWHL+EKEKKKQMST               KYMWA+VDGVKEKV
Sbjct: 450  NHIIKQFELCDFTPIYEWHLEEKEKKKQMSTEEKKALKEEKLKQEEKYMWAVVDGVKEKV 509

Query: 1808 GNFRVEPPGLFRGRGEHPKMGKLKKRIYPHDITINIGKGAPIPECPIPGERWKEIKHDNT 1629
            GNFRVEPPGLFRGRGEHPKMGKLKKRI P DITINIGK APIPECPI GERWKEI+HDNT
Sbjct: 510  GNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIAGERWKEIRHDNT 569

Query: 1628 VTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKDYIQTIRANYTKDFTSK 1449
            VTWLA+W DPIN +EFKYVFLAASS+LKGQSDKEKYEK+R LKDYIQ IRA YTKDFTSK
Sbjct: 570  VTWLAYWIDPINQREFKYVFLAASSTLKGQSDKEKYEKARMLKDYIQNIRAKYTKDFTSK 629

Query: 1448 DESRRQIAVATYLIDKLALRAGNEKDD-DEADTVGCCTLKVENVALVPPNKIQFDFLGKD 1272
            D+++RQIAVATYLIDKLALRAGNEK++ +EADTVGCCTLKVENVALVPPN +QFDFLGKD
Sbjct: 630  DDTKRQIAVATYLIDKLALRAGNEKEEGEEADTVGCCTLKVENVALVPPNNLQFDFLGKD 689

Query: 1271 SIRYFNTVDVEPAVYKAIGEFRXXXXXXXXXXKDSEDLFDKLDTSKLNAHLKELMPGLTA 1092
            SIRYFNTV+VEPAVYKAIGEFR           D++ LF  LDTSKLNAHLKELMPGLTA
Sbjct: 690  SIRYFNTVEVEPAVYKAIGEFRLKSFNGKKKH-DTDLLFHMLDTSKLNAHLKELMPGLTA 748

Query: 1091 KVFRTYNASITLDQMLNKETKDGTVQEKIAVYQTANKEVAIICNHQRSVSKTHDAQMSRL 912
            KVFRTYNASITLD+MLNKETKDGTV EK+AVYQ ANKEVAIICNHQRSVSK+HDAQM+RL
Sbjct: 749  KVFRTYNASITLDEMLNKETKDGTVPEKLAVYQQANKEVAIICNHQRSVSKSHDAQMTRL 808

Query: 911  NEKIEELKAQREELKEDLNRARKGKPPLKDAEGKPKRNMAPEMLAKKLSQVDAKIEKMEL 732
            N+K+ ELK Q EELK DL+RARKGKPPLKDAEGK K+N++PE L KKL+Q+D KIEK+EL
Sbjct: 809  NDKLAELKTQHEELKVDLSRARKGKPPLKDAEGKMKKNLSPEALEKKLAQLDVKIEKIEL 868

Query: 731  DKKIKDDLKTVALGTSKINYLDPRITVAWCKRYEVPIEKIFNKSLLAKFTWAMDADPSFR 552
            DKK+K+DLKTVALGTSKINYLDPRI+VAWCKR+EVPIEKIFNKSLLAKF WAMDADPSFR
Sbjct: 869  DKKLKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDADPSFR 928

Query: 551  F 549
            F
Sbjct: 929  F 929


>XP_009411876.1 PREDICTED: DNA topoisomerase 1 [Musa acuminata subsp. malaccensis]
          Length = 926

 Score =  973 bits (2515), Expect = 0.0
 Identities = 532/856 (62%), Positives = 599/856 (69%), Gaps = 58/856 (6%)
 Frame = -3

Query: 2942 AEPEDSDVDSDDYKPLSFRRSAAPVGI----------------------NKDSXXXXXXX 2829
            AE ++SD DSDD KPLS R ++A V +                      N  +       
Sbjct: 95   AEVQNSD-DSDDDKPLSHRLNSASVAVQKKFFMDSEKIHKHSSDHYFAKNNTNKMIVDKS 153

Query: 2828 XPGDETXXXXXXDKPLSFKIPT---SGSGGPNNRSLPEKKLISSQRPITSISVSMNDXXX 2658
               +E       +KPLS KI +     +GGP++      KL  S +P +  S+ +N    
Sbjct: 154  IIRNEESNDSDDNKPLSSKISSIAACSTGGPSH----VVKLPQSAKPTSHPSMKVNS--- 206

Query: 2657 XXXXXXXXXSRGGRIDESSDSDGDHKPLAARFQN----GSFKKGPLASGKPVS------- 2511
                          I E SD   D KPL +RFQ+    GS  K P +  K +S       
Sbjct: 207  -------------NIKEDSDDSEDEKPLISRFQSKVFGGSSVKNPDSYQKSLSPKLKFNA 253

Query: 2510 --------------GLAKRPSTDDDKSALASNKKQKYSAGLTQNKIKQE--------HSD 2397
                          G  KR   D   S  +S KK K S      K+K E          D
Sbjct: 254  SSKKEASKEIRSPKGGQKRALGDTKTSDSSSIKKAKVSETSFLVKVKNEVAVKKEVKEDD 313

Query: 2396 DDYSPISQTIXXXXXXXXXXXXXXKVLKKAISKPFKKEVDXXXXXXXXXXXXXXXKVPPG 2217
            +D+ PI+Q +               +LKK  S  FKK+                 KVPPG
Sbjct: 314  NDHIPIAQRMKKSVSSNSTSTTKN-LLKKTSS--FKKDSKQMKKKMKDSKFSKTLKVPPG 370

Query: 2216 SGEGQKWTTLEHSGVIFPPSYKPHGVKMLYDGKPVDLTPEQEEVATMFAVMKDTDYAAKK 2037
            SG GQKWTTLEH+GVIFPP YKPHGVKMLY+G+PVDLTPEQEEVATMFAVMKDT+YA KK
Sbjct: 371  SGGGQKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYATKK 430

Query: 2036 TFITNFWNDWKKVLGKNHVIKDFQRCDFTPIYEWHLKEKEKKKQMSTXXXXXXXXXXXXX 1857
             FI NF  DW+++LGKNH+IK F+ CDFTPIYEWHL+EKEKKKQMS              
Sbjct: 431  QFIENFMYDWRQILGKNHIIKKFELCDFTPIYEWHLREKEKKKQMSGEEKKALKEEKMKQ 490

Query: 1856 XXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIYPHDITINIGKGAPIPE 1677
              KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI P DITINIGK APIPE
Sbjct: 491  EEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKNAPIPE 550

Query: 1676 CPIPGERWKEIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKD 1497
            CPIPGERWKE+KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+R+L D
Sbjct: 551  CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARRLTD 610

Query: 1496 YIQTIRANYTKDFTSKDESRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVA 1317
             IQ IRANYT+DF+SKD ++RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV 
Sbjct: 611  CIQNIRANYTRDFSSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVE 670

Query: 1316 LVPPNKIQFDFLGKDSIRYFNTVDVEPAVYKAIGEFRXXXXXXXXXXKDSEDLFDKLDTS 1137
            LVPPN ++FDFLGKDSIRY NTV+VE  VYKAIGEF+             +DLFD LDTS
Sbjct: 671  LVPPNMLKFDFLGKDSIRYLNTVEVELPVYKAIGEFQTAKKSGGGRKGKGDDLFDLLDTS 730

Query: 1136 KLNAHLKELMPGLTAKVFRTYNASITLDQMLNKETKDGTVQEKIAVYQTANKEVAIICNH 957
            KLNAHLKELMPGLTAKVFRTYNASITLD +LNKETKDGT+ EKIAVYQ ANKEVAIICNH
Sbjct: 731  KLNAHLKELMPGLTAKVFRTYNASITLDDILNKETKDGTLPEKIAVYQHANKEVAIICNH 790

Query: 956  QRSVSKTHDAQMSRLNEKIEELKAQREELKEDLNRARKGKPPLKDAEGKPKRNMAPEMLA 777
            QRSVSK+H++QMSRLNEKI +LKAQR+EL  DLNRARKGKPPLKD EGK K+N++P+++ 
Sbjct: 791  QRSVSKSHESQMSRLNEKINDLKAQRDELNMDLNRARKGKPPLKDKEGKTKKNLSPDVIE 850

Query: 776  KKLSQVDAKIEKMELDKKIKDDLKTVALGTSKINYLDPRITVAWCKRYEVPIEKIFNKSL 597
            KKL QVDAKIEKMELDK+IK+DLKTVALGTSKINYLDPRI+VAWCKR+EVPIEKIFNKSL
Sbjct: 851  KKLVQVDAKIEKMELDKRIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSL 910

Query: 596  LAKFTWAMDADPSFRF 549
            LAKF WAMD DP FRF
Sbjct: 911  LAKFAWAMDVDPDFRF 926


>XP_009398771.1 PREDICTED: DNA topoisomerase 1 [Musa acuminata subsp. malaccensis]
          Length = 948

 Score =  970 bits (2507), Expect = 0.0
 Identities = 524/818 (64%), Positives = 589/818 (72%), Gaps = 9/818 (1%)
 Frame = -3

Query: 2975 KVSMNKPPFKTAEPEDSDVDSDDYKPLSFRRSAAPVGINKDSXXXXXXXXPGDETXXXXX 2796
            K++++KP  K    EDSD DSDD KPLS + S++ V +NK              T     
Sbjct: 169  KMNLDKPIIKR---EDSD-DSDDEKPLSLKFSSSTV-VNKGGPSHAMKTQSAKPTLLP-- 221

Query: 2795 XDKPLSFKIPTSGSGGPNNRSLPEKKLISSQRPITSISVSMNDXXXXXXXXXXXXSRGGR 2616
                 S KI  S   G ++ S  EK L+S  +     S SM                   
Sbjct: 222  -----SLKI-NSDIKGCSDDSEDEKPLLSRFQSKAIGSSSMKS----------------- 258

Query: 2615 IDESSDSDGDHKPLAARFQ-NGSFKKGPLASGKPVSGLAKRPSTDDDKSALASNKKQKYS 2439
                  S  D KPL+++ + NGS KK   +  +   G  KRP  D D +  +S KK K S
Sbjct: 259  ------STSDDKPLSSKLKLNGSSKKEGNSENRSSGGGQKRPLGDPDPTGSSSVKKAKVS 312

Query: 2438 AGLTQNKIKQEHS--------DDDYSPISQTIXXXXXXXXXXXXXXKVLKKAISKPFKKE 2283
                  K+K E +        D ++  ISQ I                 K      FKK+
Sbjct: 313  ETSASVKVKHEVAVKKEIKADDTNHVSISQRIKKSVSSNSASTSKNVSQKN--HSLFKKD 370

Query: 2282 VDXXXXXXXXXXXXXXXKVPPGSGEGQKWTTLEHSGVIFPPSYKPHGVKMLYDGKPVDLT 2103
            +                KVPPGSG GQKWTTLEH+GVIFPP Y PHG+KMLY G+PVDLT
Sbjct: 371  IKKMKKKDKDSKFSKILKVPPGSGGGQKWTTLEHNGVIFPPPYNPHGIKMLYKGQPVDLT 430

Query: 2102 PEQEEVATMFAVMKDTDYAAKKTFITNFWNDWKKVLGKNHVIKDFQRCDFTPIYEWHLKE 1923
            PEQEEVATMFAVMKDT+YA K  FI NF NDW+++LGK+HVIK F+ CDFTPIYEWHL+E
Sbjct: 431  PEQEEVATMFAVMKDTEYATKNQFIENFMNDWRQILGKSHVIKKFELCDFTPIYEWHLRE 490

Query: 1922 KEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGK 1743
            KEKKKQMST               KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGK
Sbjct: 491  KEKKKQMSTEEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGK 550

Query: 1742 LKKRIYPHDITINIGKGAPIPECPIPGERWKEIKHDNTVTWLAFWNDPINPKEFKYVFLA 1563
            LKKRI P DITINIGK APIPECPIPGERWKE+KHDNTVTWLAFWNDPINPKEFKYVFLA
Sbjct: 551  LKKRIRPSDITINIGKEAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLA 610

Query: 1562 ASSSLKGQSDKEKYEKSRKLKDYIQTIRANYTKDFTSKDESRRQIAVATYLIDKLALRAG 1383
            ASSSLKGQSDKEKYEK+R LK+YI  IRANYT+DFTSKD ++RQIAVATYLIDKLALRAG
Sbjct: 611  ASSSLKGQSDKEKYEKARLLKNYIHNIRANYTRDFTSKDPTKRQIAVATYLIDKLALRAG 670

Query: 1382 NEKDDDEADTVGCCTLKVENVALVPPNKIQFDFLGKDSIRYFNTVDVEPAVYKAIGEFRX 1203
            NEKDDDEADTVGCCTLKVENV LVPPN ++FDFLGKDSIRY NTV VE  VYKAIGEF+ 
Sbjct: 671  NEKDDDEADTVGCCTLKVENVELVPPNMLKFDFLGKDSIRYLNTVVVELPVYKAIGEFQT 730

Query: 1202 XXXXXXXXXKDSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDQMLNKETKDG 1023
                        +DLFD LDTSKLNAHLKELMPGLTAKVFRTYNASITLD +LNKETKDG
Sbjct: 731  AKKSDGGRKSKGDDLFDLLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDILNKETKDG 790

Query: 1022 TVQEKIAVYQTANKEVAIICNHQRSVSKTHDAQMSRLNEKIEELKAQREELKEDLNRARK 843
            T+ EKIAVYQ ANKEVAIICNHQRSVSK+H++QMS+LNEKI +LK QREEL+ DL+RARK
Sbjct: 791  TLPEKIAVYQHANKEVAIICNHQRSVSKSHESQMSKLNEKINDLKTQREELEMDLSRARK 850

Query: 842  GKPPLKDAEGKPKRNMAPEMLAKKLSQVDAKIEKMELDKKIKDDLKTVALGTSKINYLDP 663
            GKPPLKD EGK K+N++PE++ KKL+QVDAKIEKMELDKKIK+DLKTVALGTSKINYLDP
Sbjct: 851  GKPPLKDREGKTKKNLSPEVIEKKLAQVDAKIEKMELDKKIKEDLKTVALGTSKINYLDP 910

Query: 662  RITVAWCKRYEVPIEKIFNKSLLAKFTWAMDADPSFRF 549
            RI+VAWCKR+EVPIEKIFNKSLLAKF WAMD +P FRF
Sbjct: 911  RISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVEPDFRF 948


>XP_010252639.1 PREDICTED: DNA topoisomerase 1 alpha-like [Nelumbo nucifera]
          Length = 883

 Score =  968 bits (2502), Expect = 0.0
 Identities = 536/869 (61%), Positives = 609/869 (70%), Gaps = 18/869 (2%)
 Frame = -3

Query: 3101 SPNCENTYSRGNKEVSISNLLK----SDQVDMVLTSK------KVEGLPDQPKVSMNKPP 2952
            SPN +N+  +  K VS ++  K    S      +  K      K   + +  K  +NKP 
Sbjct: 61   SPNGQNSSLQKGKAVSKTSAGKPTAASSNASTSIADKSRCSPQKNLAINNMQKQQLNKP- 119

Query: 2951 FKTAEPEDSDVDSDDYKPLSFRRSAAPVGINKDSXXXXXXXXPGDETXXXXXXDKPLSFK 2772
                 P++   DSDD KPLSFR + +   +   S                          
Sbjct: 120  --CNGPKEDPDDSDDDKPLSFRLATSGSSLKIKSQPG----------------------- 154

Query: 2771 IPTSGSGGPNNRSLP-EKKLISSQRPITSISVSMNDXXXXXXXXXXXXSRGGRIDESSDS 2595
              T G G P   SL  +K  I+ ++     S    D            + G  + +  DS
Sbjct: 155  --TKGHGSPVPSSLQMDKTKITCKKS----SADSEDEIPLSSKFQLKTNVGSSV-KKYDS 207

Query: 2594 DGDHKPLAARFQ-NGSFKKGPLASGKPVSGLAKRPSTDDDKSALASNKKQKYS----AGL 2430
            D + KPL  +FQ NGS KK    S K +  L KRP +D + S  +  KK K S    A +
Sbjct: 208  D-EEKPLIFKFQQNGSSKKDNELS-KSLKSLNKRPMSDVNTSGQSLVKKPKLSESIPAKV 265

Query: 2429 TQNKIKQEHSDDDYS--PISQTIXXXXXXXXXXXXXXKVLKKAISKPFKKEVDXXXXXXX 2256
             Q  IK E  +DD    PISQ +              K   K +S  FKK          
Sbjct: 266  KQAPIKSEPKEDDEDNIPISQRLKKSAPSDNKSSSTKKTTTKVVSSSFKKT----SKKLK 321

Query: 2255 XXXXXXXXKVPPGSGEGQKWTTLEHSGVIFPPSYKPHGVKMLYDGKPVDLTPEQEEVATM 2076
                    KVPP SGEGQKWTTLEH+GVIFPP YKPHGVKMLY+G+PVDLTPEQEEVATM
Sbjct: 322  KDKYSKSTKVPPSSGEGQKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATM 381

Query: 2075 FAVMKDTDYAAKKTFITNFWNDWKKVLGKNHVIKDFQRCDFTPIYEWHLKEKEKKKQMST 1896
            FAVMKDT+YA K+ F+ NF NDWK +LGKNHVIK F+ CDFTPIYEWH +EKEKKKQMS 
Sbjct: 382  FAVMKDTEYATKQKFVENFMNDWKVILGKNHVIKKFELCDFTPIYEWHQREKEKKKQMSA 441

Query: 1895 XXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIYPHD 1716
                           KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI P+D
Sbjct: 442  EEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPND 501

Query: 1715 ITINIGKGAPIPECPIPGERWKEIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 1536
            ITINIGKGAP+PECPIPGERWKE+KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS
Sbjct: 502  ITINIGKGAPVPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 561

Query: 1535 DKEKYEKSRKLKDYIQTIRANYTKDFTSKDESRRQIAVATYLIDKLALRAGNEKDDDEAD 1356
            DKEKYEK+R LKDYI+ IRANYT+DF+SKD ++RQIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 562  DKEKYEKARLLKDYIKDIRANYTRDFSSKDIAKRQIAVATYLIDKLALRAGNEKDDDEAD 621

Query: 1355 TVGCCTLKVENVALVPPNKIQFDFLGKDSIRYFNTVDVEPAVYKAIGEFRXXXXXXXXXX 1176
            TVGCCTLKVENV L+PPNK+QFDFLGKDSIRYFNTV+VE  VYKAIG+F+          
Sbjct: 622  TVGCCTLKVENVELIPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFK-------EGK 674

Query: 1175 KDSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDQMLNKETKDGTVQEKIAVY 996
            K+ EDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLD MLNKETKDG V EKI VY
Sbjct: 675  KEGEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKETKDGDVAEKITVY 734

Query: 995  QTANKEVAIICNHQRSVSKTHDAQMSRLNEKIEELKAQREELKEDLNRARKGKPPLKDAE 816
            Q ANKEVAIICNHQRSVSK+H AQM+RL++KI+ELK   +ELK DL RA+KGKPPLK A+
Sbjct: 735  QHANKEVAIICNHQRSVSKSHSAQMNRLDDKIKELKELLDELKTDLARAKKGKPPLKGAD 794

Query: 815  GKPKRNMAPEMLAKKLSQVDAKIEKMELDKKIKDDLKTVALGTSKINYLDPRITVAWCKR 636
            GKPKRN+ PE L +K++Q +AKIEKME DK+IK+DLKTVALGTSKINYLDPRI+VAWCKR
Sbjct: 795  GKPKRNLTPEALERKIAQANAKIEKMERDKQIKEDLKTVALGTSKINYLDPRISVAWCKR 854

Query: 635  YEVPIEKIFNKSLLAKFTWAMDADPSFRF 549
            +EVPIEKIFNKSLLAKF WAMD DPSFRF
Sbjct: 855  HEVPIEKIFNKSLLAKFAWAMDVDPSFRF 883


>XP_020110486.1 DNA topoisomerase 1 alpha-like isoform X1 [Ananas comosus] OAY76967.1
            DNA topoisomerase 1 [Ananas comosus]
          Length = 885

 Score =  967 bits (2500), Expect = 0.0
 Identities = 522/874 (59%), Positives = 598/874 (68%), Gaps = 20/874 (2%)
 Frame = -3

Query: 3110 DQNSPNCENTYSRGNKEVSISNLLKSDQVDMVLTSKKVEGLPDQPKVSMNKPPFKTAEPE 2931
            +++S N EN+ S+ NK +S   +   +     L S+    + +     + +P    +E E
Sbjct: 58   NKHSSNGENSNSQKNKAISAVKISNQNPRSTSLVSRASVPVSNVKSTHLQRPH---SEAE 114

Query: 2930 DSDVDSDDYKPLSFRRSAAPVGINKDSXXXXXXXXPGDETXXXXXXDKPLSFKIPTSGSG 2751
            ++D DSDD KPL++R ++A     K                                   
Sbjct: 115  NTD-DSDDDKPLTYRLNSASAASQK----------------------------------- 138

Query: 2750 GPNNRSLPEKKLISSQRPITSISVSMNDXXXXXXXXXXXXSRGGRIDESSDSDGDHKPLA 2571
              +N  L E+ ++ S+   +  S   +D            +  G   E SD   D KPL 
Sbjct: 139  --SNSMLVERAILDSK---SEFSYDSDDNRPLSSKSLPAVTEKGSKKEYSDDSEDDKPLL 193

Query: 2570 ARFQ-----------NGSFKKGPLASGKPVSGLAKRPSTDDDKSALASNKKQKYSAGLTQ 2424
            +R             N S KK   +      GL KRP  D + S   S KK K       
Sbjct: 194  SRLPLKSTSASKVAPNASIKKESSSDLGFTKGLNKRPLGDSNSSIGPSIKKPKIFNSSAS 253

Query: 2423 NKIKQEHS---------DDDYSPISQTIXXXXXXXXXXXXXXKVLKKAISKPFKKEVDXX 2271
             K+K E S         DDD  P+SQ +               + K   S  FKK+    
Sbjct: 254  VKVKDEGSVKEELKTEDDDDDIPLSQRLKNSQSSERKPSSNKIIKKPTSS--FKKDWKKM 311

Query: 2270 XXXXXXXXXXXXXKVPPGSGEGQKWTTLEHSGVIFPPSYKPHGVKMLYDGKPVDLTPEQE 2091
                         KVPPGSG G+KWTTLEH+GVIFPP Y PHGVKMLY+G+PVDLTPEQE
Sbjct: 312  KKSFKNSQFSKRLKVPPGSGGGKKWTTLEHNGVIFPPPYAPHGVKMLYNGQPVDLTPEQE 371

Query: 2090 EVATMFAVMKDTDYAAKKTFITNFWNDWKKVLGKNHVIKDFQRCDFTPIYEWHLKEKEKK 1911
            EVATMFAVMKDTDYA K  FI NFWNDW+++LGKNHVIK F+ CDFTPIYEWHL+EKEKK
Sbjct: 372  EVATMFAVMKDTDYATKPKFIENFWNDWRQILGKNHVIKKFELCDFTPIYEWHLREKEKK 431

Query: 1910 KQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKR 1731
            KQMS+               KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+R
Sbjct: 432  KQMSSEEKKALKEEKLKKEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRR 491

Query: 1730 IYPHDITINIGKGAPIPECPIPGERWKEIKHDNTVTWLAFWNDPINPKEFKYVFLAASSS 1551
            I P DITINIGK APIPECPI GERWKEIKHDNTVTWLAFW DPIN +EFKYVFLAASSS
Sbjct: 492  IRPSDITINIGKDAPIPECPILGERWKEIKHDNTVTWLAFWPDPINSREFKYVFLAASSS 551

Query: 1550 LKGQSDKEKYEKSRKLKDYIQTIRANYTKDFTSKDESRRQIAVATYLIDKLALRAGNEKD 1371
            LKGQSDKEKYEK+R LKDYI TIR NYT+DFTS+D ++RQIAVATYLIDKLALRAGNEKD
Sbjct: 552  LKGQSDKEKYEKARLLKDYIHTIRENYTRDFTSRDATKRQIAVATYLIDKLALRAGNEKD 611

Query: 1370 DDEADTVGCCTLKVENVALVPPNKIQFDFLGKDSIRYFNTVDVEPAVYKAIGEFRXXXXX 1191
            DDEADTVGCCTLKVENV  VPPNK+QFDFLGKDSIRYFNTV+VE  VYKAI EFR     
Sbjct: 612  DDEADTVGCCTLKVENVVCVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIEEFRTAKKS 671

Query: 1190 XXXXXKDSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDQMLNKETKDGTVQE 1011
                    +DLFD LDTSKLNAHLKELMPGLTAKVFRTYNASITLD +LNKETK+GT+ E
Sbjct: 672  DGKRKSIGDDLFDLLDTSKLNAHLKELMPGLTAKVFRTYNASITLDNILNKETKEGTLPE 731

Query: 1010 KIAVYQTANKEVAIICNHQRSVSKTHDAQMSRLNEKIEELKAQREELKEDLNRARKGKPP 831
            KIAVYQ ANKEVAIICNHQRSVSK+H++QMS+LNEKI +LKA REELK DL+RARKGKPP
Sbjct: 732  KIAVYQHANKEVAIICNHQRSVSKSHESQMSKLNEKINDLKALREELKVDLSRARKGKPP 791

Query: 830  LKDAEGKPKRNMAPEMLAKKLSQVDAKIEKMELDKKIKDDLKTVALGTSKINYLDPRITV 651
            LKD EG PK+N++P+ + KKLSQ + KIEKME+DKKIK+DLKTVALGTSKINYLDPRI+V
Sbjct: 792  LKDKEGTPKKNLSPDAIEKKLSQTEVKIEKMEIDKKIKEDLKTVALGTSKINYLDPRISV 851

Query: 650  AWCKRYEVPIEKIFNKSLLAKFTWAMDADPSFRF 549
            AWCKR+EVPIEKIFNKSLLAKF WAMD DP +RF
Sbjct: 852  AWCKRHEVPIEKIFNKSLLAKFAWAMDVDPGYRF 885


>XP_010266803.1 PREDICTED: DNA topoisomerase 1 alpha-like [Nelumbo nucifera]
          Length = 890

 Score =  965 bits (2495), Expect = 0.0
 Identities = 510/766 (66%), Positives = 570/766 (74%), Gaps = 19/766 (2%)
 Frame = -3

Query: 2789 KPLSFKIPTSGS-----GGPNNRSLPEKKLISSQRPITSI----SVSMNDXXXXXXXXXX 2637
            KPLS ++PTS S       P ++ L      SSQ   T++    S   ++          
Sbjct: 136  KPLSIRLPTSASLLKCKSSPVSKGLSSPVASSSQSEKTNVTNKKSSEDSEDELPLSLKLK 195

Query: 2636 XXSRGGRIDESSDSDGDHKPLAARFQ-NGSFKKG--PLASGKPVSGLAKRPSTDDDKSAL 2466
                 G   +     G+ KPL ++ Q NGS K+   PL S K    L KRP +  + S  
Sbjct: 196  LKPSVGLSGKKFYDSGEEKPLVSKLQQNGSSKRDNEPLKSPK---NLNKRPLSGANSSGQ 252

Query: 2465 ASNKKQKYSAGLTQNKIKQ-------EHSDDDYSPISQTIXXXXXXXXXXXXXXKVLKKA 2307
            +  KK K S      K+KQ       +  D+D  PISQ +              K  K  
Sbjct: 253  SLVKKLKVSEVSVPTKVKQTSIKSEPKEEDEDDIPISQRLKKSASSDDKSLSLKKTTK-V 311

Query: 2306 ISKPFKKEVDXXXXXXXXXXXXXXXKVPPGSGEGQKWTTLEHSGVIFPPSYKPHGVKMLY 2127
            +S  FKK  +               K+PP SGEGQKWTTLEH+GVIFPP YKPHGVKMLY
Sbjct: 312  VSSSFKKTTNKLKKAAKNSKYSKSTKMPPSSGEGQKWTTLEHNGVIFPPLYKPHGVKMLY 371

Query: 2126 DGKPVDLTPEQEEVATMFAVMKDTDYAAKKTFITNFWNDWKKVLGKNHVIKDFQRCDFTP 1947
            +GKPVDLTPEQEEVATMFAVMKDTDYA K  FI NF NDW+ +LGKNHVIK F+ CDFTP
Sbjct: 372  NGKPVDLTPEQEEVATMFAVMKDTDYATKSRFIENFMNDWRTILGKNHVIKKFELCDFTP 431

Query: 1946 IYEWHLKEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGR 1767
            IYEWH +EKEKKKQMS                KYMWAIVDGVKEKVGNFRVEPPGLFRGR
Sbjct: 432  IYEWHQREKEKKKQMSAEEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGR 491

Query: 1766 GEHPKMGKLKKRIYPHDITINIGKGAPIPECPIPGERWKEIKHDNTVTWLAFWNDPINPK 1587
            GEHPKMGKLKKRI+P DITINIGKGAPIPECPIPGERWKE++HDNTVTWLAFWNDPINPK
Sbjct: 492  GEHPKMGKLKKRIHPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINPK 551

Query: 1586 EFKYVFLAASSSLKGQSDKEKYEKSRKLKDYIQTIRANYTKDFTSKDESRRQIAVATYLI 1407
            EFKYVFLAASSSLKGQSDKEKYEK+R LKDYI+ IRANYT+DF SKD ++RQIAVATYLI
Sbjct: 552  EFKYVFLAASSSLKGQSDKEKYEKARLLKDYIKDIRANYTRDFVSKDITKRQIAVATYLI 611

Query: 1406 DKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKIQFDFLGKDSIRYFNTVDVEPAVY 1227
            DKLALRAGNEKDDDEADTVGCCTLKVENV LVPPNK+QFDFLGKDSIRYFNTV+VE AVY
Sbjct: 612  DKLALRAGNEKDDDEADTVGCCTLKVENVELVPPNKLQFDFLGKDSIRYFNTVEVELAVY 671

Query: 1226 KAIGEFRXXXXXXXXXXKDSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDQM 1047
            KAIG+F+          +D EDLFD LDTSKLNAHLKELMPGLTAKVFRTYNASITLD+M
Sbjct: 672  KAIGQFK-------NGKEDGEDLFDSLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEM 724

Query: 1046 LNKETKDGTVQEKIAVYQTANKEVAIICNHQRSVSKTHDAQMSRLNEKIEELKAQREELK 867
            LN+E+K G V EKIAVYQ ANKEVAIICNHQRSVSK+H AQM RL++KI+ELK   +ELK
Sbjct: 725  LNRESKGGDVAEKIAVYQHANKEVAIICNHQRSVSKSHSAQMHRLDDKIKELKDALDELK 784

Query: 866  EDLNRARKGKPPLKDAEGKPKRNMAPEMLAKKLSQVDAKIEKMELDKKIKDDLKTVALGT 687
             DL RA+KGKPPLK A+GKPKRN+ PE L KK++Q +AKIEKME DK+IK+DLKTVALGT
Sbjct: 785  TDLARAKKGKPPLKGADGKPKRNLTPEALEKKIAQANAKIEKMERDKQIKEDLKTVALGT 844

Query: 686  SKINYLDPRITVAWCKRYEVPIEKIFNKSLLAKFTWAMDADPSFRF 549
            SKINYLDPRI+VAWCKR+EVPIEKIFNKSLLAKF WAMD DP FRF
Sbjct: 845  SKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 890


>OAY66604.1 DNA topoisomerase 1 [Ananas comosus]
          Length = 970

 Score =  959 bits (2478), Expect = 0.0
 Identities = 528/916 (57%), Positives = 612/916 (66%), Gaps = 62/916 (6%)
 Frame = -3

Query: 3110 DQNSPNCENTYSRGNKEVSISNL-LKSDQVDMVLTSKKVEGLPDQPKV------SMNKPP 2952
            D +SPN EN+  + +K  S S +  +  ++   ++   V G P+          SM+K  
Sbjct: 57   DHSSPNGENSNLQKSKGTSTSKMPTERPKIPNPVSRSSVPGPPNHSSENKHTTSSMDKTN 116

Query: 2951 FKTAEPEDSDVDSDDYKPLSFRRSAAPVGINKDSXXXXXXXXPGDETXXXXXXDKPLSFK 2772
             K   P ++  DSDD  PLS R + A   +   S          + +      +KPL  K
Sbjct: 117  LK--RPHENSDDSDDNIPLSQRANPASKMVKHFSEQRDTSHGKVEPSSDSDDDNKPLISK 174

Query: 2771 IPTSGSG-----GPNNRSLPEKKLISSQRPITSISVSMNDXXXXXXXXXXXXSR--GGRI 2613
              + G+G        NRS  E    S  +   +  V  N             +R      
Sbjct: 175  YSSVGAGKVPASSSKNRSGKESADDSEDKKPLASKVKANASTAGAEHVASSSARKINSSS 234

Query: 2612 DESSDSDGDHKPLAARFQNGSFKKGP----LASGKPVSGLAKRPSTDDDK---SALASN- 2457
             E++D   D KPLA +F+  +   G      +S K +S  +K   ++D K   S + +N 
Sbjct: 235  KENADDSEDEKPLAFKFKANAATTGAGQVASSSSKKISSSSKANDSEDRKPLASKIKANM 294

Query: 2456 --------------------------------KKQKYSAGLTQNKIKQEH--------SD 2397
                                            KK K S      K+K E          D
Sbjct: 295  SIKKETGNESRSPKDINKRTLGDVNNRNDSLVKKAKVSDNSAFVKVKHESVVKKELKTDD 354

Query: 2396 DDYSPISQTIXXXXXXXXXXXXXXKVLKKAISKPFKKEVDXXXXXXXXXXXXXXXKVPPG 2217
             D  P+++ +               + K   S     +                 KVPPG
Sbjct: 355  GDRKPLAEKMRKLGSSDSKSSTTKVIKKTTPSSKKDGKKLKMKKAMKKSTFSKSLKVPPG 414

Query: 2216 SGEGQKWTTLEHSGVIFPPSYKPHGVKMLYDGKPVDLTPEQEEVATMFAVMKDTDYAAKK 2037
            SG GQKWTTLEH+GVIFPP Y+PHGVKMLY+G+PVDLTPEQEEVATMFAVMKDTDYA K 
Sbjct: 415  SGGGQKWTTLEHNGVIFPPPYQPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYATKP 474

Query: 2036 TFITNFWNDWKKVLGKNHVIKDFQRCDFTPIYEWHLKEKEKKKQMSTXXXXXXXXXXXXX 1857
             FI NF+NDW++VLGKNHVIK F+ CDFTPIYEWHLKEKEKKKQMS              
Sbjct: 475  KFIHNFFNDWRQVLGKNHVIKKFELCDFTPIYEWHLKEKEKKKQMSAAEKKALKEEKLKK 534

Query: 1856 XXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIYPHDITINIGKGAPIPE 1677
              KYMWAIVDGVKEKVGNFRVEPP LFRGRGEHPKMGKLK+RI P DITINIGK APIPE
Sbjct: 535  EDKYMWAIVDGVKEKVGNFRVEPPALFRGRGEHPKMGKLKRRIRPSDITINIGKNAPIPE 594

Query: 1676 CPIPGERWKEIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKD 1497
            CPIPGERW+E+KHDNTVTWLA+W+DPINPK+ KYVFLAASSSLKGQSDKEKYEK+R+LKD
Sbjct: 595  CPIPGERWREVKHDNTVTWLAYWSDPINPKDSKYVFLAASSSLKGQSDKEKYEKARQLKD 654

Query: 1496 YIQTIRANYTKDFTSKDESRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVA 1317
            YI  IR+ YTKDF SKD ++RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV 
Sbjct: 655  YIHNIRSTYTKDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVI 714

Query: 1316 LVPPNKIQFDFLGKDSIRYFNTVDVEPAVYKAIGEFRXXXXXXXXXXKDSEDLFDKLDTS 1137
             VPPN++QFDFLGKDSIRYFNTV+VE  VYKAIGEFR           D +DLFD LDTS
Sbjct: 715  CVPPNQLQFDFLGKDSIRYFNTVEVEAPVYKAIGEFRTARKGDGKRKGDGDDLFDLLDTS 774

Query: 1136 KLNAHLKELMPGLTAKVFRTYNASITLDQMLNKETKDGTVQEKIAVYQTANKEVAIICNH 957
            KLNAHLKELMPGLTAKVFRTYNASITLD +LNKETK+GT+ EKIAVYQ ANKEVAIICNH
Sbjct: 775  KLNAHLKELMPGLTAKVFRTYNASITLDDILNKETKEGTLPEKIAVYQRANKEVAIICNH 834

Query: 956  QRSVSKTHDAQMSRLNEKIEELKAQREELKEDLNRARKGKPPLKDAEGKPKRNMAPEMLA 777
            QRSVSK+H++QMSRLNEKI+ELKA REELK DL+RARKGKPPLKDA+GK KRN++PE + 
Sbjct: 835  QRSVSKSHESQMSRLNEKIDELKALREELKVDLSRARKGKPPLKDADGKTKRNLSPEAIQ 894

Query: 776  KKLSQVDAKIEKMELDKKIKDDLKTVALGTSKINYLDPRITVAWCKRYEVPIEKIFNKSL 597
            KKL+Q +AKIEKMELDKKIK+DLKTVALGTSKINYLDPRI+VAWCKR+EVPIEKIFNKSL
Sbjct: 895  KKLAQTNAKIEKMELDKKIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSL 954

Query: 596  LAKFTWAMDADPSFRF 549
            LAKF WAMD DPS+RF
Sbjct: 955  LAKFAWAMDVDPSYRF 970


>XP_020111558.1 DNA topoisomerase 1 beta-like isoform X1 [Ananas comosus]
          Length = 970

 Score =  958 bits (2476), Expect = 0.0
 Identities = 530/916 (57%), Positives = 610/916 (66%), Gaps = 62/916 (6%)
 Frame = -3

Query: 3110 DQNSPNCENTYSRGNKEVSISNL-LKSDQVDMVLTSKKVEGLPDQPKV------SMNKPP 2952
            D +SPN EN+  + +K  S S +  +  ++   ++   V G P+          SM++  
Sbjct: 57   DHSSPNGENSNLQKSKGTSTSKMPTERPKIPNPVSRSSVPGPPNHSSENKHTTSSMDRTN 116

Query: 2951 FKTAEPEDSDVDSDDYKPLSFRRSAAPVGINKDSXXXXXXXXPGDETXXXXXXDKPLSFK 2772
             K   P ++  DSDD  PLS R + A   +   S          + +      +KPL  K
Sbjct: 117  LK--RPHENSDDSDDNIPLSQRANPASKMVKHFSEQRDTSHGKVEPSSDSDDDNKPLISK 174

Query: 2771 IPTSGSG-----GPNNRSLPEKKLISSQRPITSISVSMNDXXXXXXXXXXXXSR--GGRI 2613
              + G+G        NRS  E    S  +   +  V  N             +R      
Sbjct: 175  YSSVGAGKVPASSSKNRSGKESADDSEDKKPLASKVKANASTAGAEHVASSSARKINSSS 234

Query: 2612 DESSDSDGDHKPLAARFQ-------------------------NGSFKKGPLASG----- 2523
             E++D   D KPLA +F+                         N S  + PLAS      
Sbjct: 235  KENADDSEDEKPLAFKFKANAATTGAGQVASSSSKKINSSSKANDSEDRKPLASKIKANM 294

Query: 2522 --KPVSGLAKRPSTDDDKSALASN--------KKQKYSAGLTQNKIKQEH--------SD 2397
              K  +G   R   D +K  L           KK K S      K+K E          D
Sbjct: 295  SIKKETGSESRSPKDINKRTLGDVNNRNDSLVKKAKVSDNSAFVKVKHESVVKKELKTDD 354

Query: 2396 DDYSPISQTIXXXXXXXXXXXXXXKVLKKAISKPFKKEVDXXXXXXXXXXXXXXXKVPPG 2217
             D  P+++ +               + K   S     +                 KVPPG
Sbjct: 355  GDRKPLAEKMRKLGSSDSKSSTTKVIKKPTPSSKKDGKKLKMKKAMKKSTFSKSLKVPPG 414

Query: 2216 SGEGQKWTTLEHSGVIFPPSYKPHGVKMLYDGKPVDLTPEQEEVATMFAVMKDTDYAAKK 2037
            SG GQKWTTLEH+GVIFPP Y+PHGVKMLY+G+PVDLTPEQEEVATMFAVMKDTDYA K 
Sbjct: 415  SGGGQKWTTLEHNGVIFPPPYQPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYATKP 474

Query: 2036 TFITNFWNDWKKVLGKNHVIKDFQRCDFTPIYEWHLKEKEKKKQMSTXXXXXXXXXXXXX 1857
             FI NF+NDW++VLGKNHVIK F+ CDFTPIYEWHLKEKEKKKQMS              
Sbjct: 475  KFIHNFFNDWRQVLGKNHVIKKFELCDFTPIYEWHLKEKEKKKQMSAAEKKALKEEKLKK 534

Query: 1856 XXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIYPHDITINIGKGAPIPE 1677
              KYMWAIVDGVKEKVGNFRVEPP LFRGRGEHPKMGKLK+RI P DITINIGK APIPE
Sbjct: 535  EDKYMWAIVDGVKEKVGNFRVEPPALFRGRGEHPKMGKLKRRIRPSDITINIGKNAPIPE 594

Query: 1676 CPIPGERWKEIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKD 1497
            CPIPGERW+E+KHDNTVTWLA+W+DPINPK+ KYVFLAASSSLKGQSDKEKYEK+R+LKD
Sbjct: 595  CPIPGERWREVKHDNTVTWLAYWSDPINPKDSKYVFLAASSSLKGQSDKEKYEKARQLKD 654

Query: 1496 YIQTIRANYTKDFTSKDESRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVA 1317
            YI  IR+ YTKDF SKD ++RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV 
Sbjct: 655  YIHNIRSTYTKDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVI 714

Query: 1316 LVPPNKIQFDFLGKDSIRYFNTVDVEPAVYKAIGEFRXXXXXXXXXXKDSEDLFDKLDTS 1137
             VPPN++QFDFLGKDSIRYFNTV+VE  VYKAIGEFR           D +DLFD LDTS
Sbjct: 715  CVPPNQLQFDFLGKDSIRYFNTVEVEAPVYKAIGEFRTAKKGDGKRKGDGDDLFDLLDTS 774

Query: 1136 KLNAHLKELMPGLTAKVFRTYNASITLDQMLNKETKDGTVQEKIAVYQTANKEVAIICNH 957
            KLNAHLKELMPGLTAKVFRTYNASITLD +LNKETK+GT+ EKIAVYQ ANKEVAIICNH
Sbjct: 775  KLNAHLKELMPGLTAKVFRTYNASITLDDILNKETKEGTLPEKIAVYQRANKEVAIICNH 834

Query: 956  QRSVSKTHDAQMSRLNEKIEELKAQREELKEDLNRARKGKPPLKDAEGKPKRNMAPEMLA 777
            QRSVSK+H++QMSRLNEKI+ELKA REELK DL+RARKGKPPLKDA+GK KRN++PE + 
Sbjct: 835  QRSVSKSHESQMSRLNEKIDELKALREELKVDLSRARKGKPPLKDADGKTKRNLSPEAIQ 894

Query: 776  KKLSQVDAKIEKMELDKKIKDDLKTVALGTSKINYLDPRITVAWCKRYEVPIEKIFNKSL 597
            KKL+Q +AKIEKMELDKKIK+DLKTVALGTSKINYLDPRI+VAWCKR+EVPIEKIFNKSL
Sbjct: 895  KKLAQTNAKIEKMELDKKIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSL 954

Query: 596  LAKFTWAMDADPSFRF 549
            LAKF WAMD DPS+RF
Sbjct: 955  LAKFAWAMDVDPSYRF 970


>ONK79065.1 uncharacterized protein A4U43_C01F2540 [Asparagus officinalis]
          Length = 852

 Score =  957 bits (2475), Expect = 0.0
 Identities = 502/753 (66%), Positives = 565/753 (75%), Gaps = 7/753 (0%)
 Frame = -3

Query: 2786 PLSFKIPTSGSGGPNNRSLPEKKLISSQRPITSISVSMNDXXXXXXXXXXXXSRGGRIDE 2607
            PLS K P+S      +   P     +SQ+   S + +  D            S+   I +
Sbjct: 114  PLSAKFPSSSGAVQRSNPSPMPTSTTSQKIKESTAATTGDSEDEKPLSSRLPSKSSVIKK 173

Query: 2606 SSDSDGDHKPLAARFQNGSFKKGPLASGKPVSGLAKRPSTDDDKSALASNKKQKYSAGLT 2427
            S     + KPLA+   NGS K+   +  KP   L KRP  D + S  +S+KK K S    
Sbjct: 174  SGS---EKKPLAS---NGS-KRTESSDIKPKIVLNKRPPADMNHSIESSSKKAKLSNAPV 226

Query: 2426 QNKIKQE-------HSDDDYSPISQTIXXXXXXXXXXXXXXKVLKKAISKPFKKEVDXXX 2268
              K+K E         D+D+ PISQ I                + K I+  FKK+     
Sbjct: 227  PGKVKTEAVLKKEKEDDNDHIPISQRIKKSVPSSSQLSTK--TVTKKIAYSFKKDKKMMK 284

Query: 2267 XXXXXXXXXXXXKVPPGSGEGQKWTTLEHSGVIFPPSYKPHGVKMLYDGKPVDLTPEQEE 2088
                        KVPPGSG GQKWTTLEH+GVIFPP YKPHGVKMLY+G+PVDLTPEQEE
Sbjct: 285  KTMKNSKYSKNLKVPPGSGGGQKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEE 344

Query: 2087 VATMFAVMKDTDYAAKKTFITNFWNDWKKVLGKNHVIKDFQRCDFTPIYEWHLKEKEKKK 1908
            VATMFAVMKDTDYA K TFI NF  DW ++LGKNH+IK F+ CDFTPIYEWHLKEKEKKK
Sbjct: 345  VATMFAVMKDTDYATKPTFIKNFMEDWGRILGKNHIIKKFELCDFTPIYEWHLKEKEKKK 404

Query: 1907 QMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1728
            QM++               KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI
Sbjct: 405  QMTSEEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRI 464

Query: 1727 YPHDITINIGKGAPIPECPIPGERWKEIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSL 1548
             P DITINIGK AP+PECPIPG+RWKEI+HDNTVTWLAFWNDPINPKEFKYVFLAASSSL
Sbjct: 465  RPKDITINIGKDAPVPECPIPGQRWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSSL 524

Query: 1547 KGQSDKEKYEKSRKLKDYIQTIRANYTKDFTSKDESRRQIAVATYLIDKLALRAGNEKDD 1368
            KGQSDKEKYEK+R LKDYI+ IRA YTKDFTSKD ++RQIAVATYLIDKLALRAGNEKDD
Sbjct: 525  KGQSDKEKYEKARLLKDYIEGIRATYTKDFTSKDPTKRQIAVATYLIDKLALRAGNEKDD 584

Query: 1367 DEADTVGCCTLKVENVALVPPNKIQFDFLGKDSIRYFNTVDVEPAVYKAIGEFRXXXXXX 1188
            DEADTVGCCTLKVENV  VPPNK+QFDFLGKDSIRYFNTV+VE  VYKAIG+F+      
Sbjct: 585  DEADTVGCCTLKVENVTCVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGDFQTVTKSN 644

Query: 1187 XXXXKDSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDQMLNKETKDGTVQEK 1008
                   +DLFD LDTSKLNAHLKELMPGLTAKVFRTYNASITLD ML +ETK+GT+ EK
Sbjct: 645  GKKKAGGDDLFDMLDTSKLNAHLKELMPGLTAKVFRTYNASITLDSMLFEETKEGTLPEK 704

Query: 1007 IAVYQTANKEVAIICNHQRSVSKTHDAQMSRLNEKIEELKAQREELKEDLNRARKGKPPL 828
            IA+YQ ANKEVAIICNHQRSVSK+HDAQMSRLNEKI+ELKAQ+EEL+ DL+RARKGKP L
Sbjct: 705  IAIYQHANKEVAIICNHQRSVSKSHDAQMSRLNEKIDELKAQKEELQVDLSRARKGKPTL 764

Query: 827  KDAEGKPKRNMAPEMLAKKLSQVDAKIEKMELDKKIKDDLKTVALGTSKINYLDPRITVA 648
            K      K+N++PE+L KKL+QV+AKIEKME+DKK+K+DLKTVALGTSKINYLDPRI+VA
Sbjct: 765  KQ-----KKNLSPEVLEKKLNQVEAKIEKMEIDKKVKEDLKTVALGTSKINYLDPRISVA 819

Query: 647  WCKRYEVPIEKIFNKSLLAKFTWAMDADPSFRF 549
            WCKR EVPIEKIFNKSLLAKF+WAMD DP +RF
Sbjct: 820  WCKRNEVPIEKIFNKSLLAKFSWAMDVDPDYRF 852


>XP_009407901.1 PREDICTED: DNA topoisomerase 1-like isoform X2 [Musa acuminata subsp.
            malaccensis] XP_009407902.1 PREDICTED: DNA topoisomerase
            1-like isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 951

 Score =  955 bits (2469), Expect = 0.0
 Identities = 527/854 (61%), Positives = 594/854 (69%), Gaps = 56/854 (6%)
 Frame = -3

Query: 2942 AEPEDSDVD-SDDYKPLSFRRSAAPVGINKDSXXXXXXXXPG------------------ 2820
            + PE  ++D S+D KPLS R ++  V + K +                            
Sbjct: 117  SSPEVQELDDSNDDKPLSHRLNSVSVAVQKKNSTDLEKIDMHSLDHKFVKKSTDKMDLDK 176

Query: 2819 ----DETXXXXXXDKPLSFKIPTSGSGGPNNRSLPEKKLISSQRPITSISVSMNDXXXXX 2652
                +E       DKPLS+K  +S +   +  S   K   SS +P +  S+ MN      
Sbjct: 177  PIIKNEDSDYSDDDKPLSYKFSSSAAVNKSGFSRVMKAPQSS-KPTSPPSMKMNS----- 230

Query: 2651 XXXXXXXSRGGRIDESSDSDGDHKPLAARFQN----GSFKKGPLASGKPVS------GLA 2502
                        I+  SD   D KPL +RFQ+    GS  KG  +  KP S      G +
Sbjct: 231  -----------NIEGFSDDSEDEKPLLSRFQSKATGGSSMKGSNSDEKPFSSKLKVHGSS 279

Query: 2501 KRPSTDDD--------------KSALASN-KKQKYSAGLTQNKIKQEHS--------DDD 2391
            K+    D+              K   +SN KK K S      K+K E +        D D
Sbjct: 280  KKEGNSDNTFPKGGQKRPLGGIKPTESSNIKKVKVSETPASVKVKHEIAVKKEIKADDSD 339

Query: 2390 YSPISQTIXXXXXXXXXXXXXXKVLKKAISKPFKKEVDXXXXXXXXXXXXXXXKVPPGSG 2211
              PI+Q +               VL K  S  FK +                 KVPPGSG
Sbjct: 340  QIPIAQRMKKTVSSNSTSVSKS-VLHKTHSS-FKTDGKKMKTNMKDFKYSKSLKVPPGSG 397

Query: 2210 EGQKWTTLEHSGVIFPPSYKPHGVKMLYDGKPVDLTPEQEEVATMFAVMKDTDYAAKKTF 2031
             GQKWTTLEH+GVIFPP YKPHGVKMLY+G+PVDLTPEQEEVATMFAVMKDTDYA KK F
Sbjct: 398  GGQKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYATKKQF 457

Query: 2030 ITNFWNDWKKVLGKNHVIKDFQRCDFTPIYEWHLKEKEKKKQMSTXXXXXXXXXXXXXXX 1851
            I NF NDW+++LGKNHVIK F+ CDFTPI EWHL+EKEKKKQMS                
Sbjct: 458  IENFMNDWRQILGKNHVIKKFELCDFTPINEWHLREKEKKKQMSAEEKKAVKEEKLKQEE 517

Query: 1850 KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIYPHDITINIGKGAPIPECP 1671
            KYMWAIVD VKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI P DITINIGK APIPECP
Sbjct: 518  KYMWAIVDDVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECP 577

Query: 1670 IPGERWKEIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKDYI 1491
            I GERWKEIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD+EKYEK+R LKDYI
Sbjct: 578  ISGERWKEIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKYEKARLLKDYI 637

Query: 1490 QTIRANYTKDFTSKDESRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALV 1311
              IRANYT+DF SKD +++QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV LV
Sbjct: 638  HNIRANYTRDFASKDPTKQQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELV 697

Query: 1310 PPNKIQFDFLGKDSIRYFNTVDVEPAVYKAIGEFRXXXXXXXXXXKDSEDLFDKLDTSKL 1131
            PPN ++FDFLGKDSIRY NTV+VE  VYKAIGEF+             +DLFD LDTSKL
Sbjct: 698  PPNMLKFDFLGKDSIRYLNTVEVELPVYKAIGEFQTAKKSDGGRKGKGDDLFDLLDTSKL 757

Query: 1130 NAHLKELMPGLTAKVFRTYNASITLDQMLNKETKDGTVQEKIAVYQTANKEVAIICNHQR 951
            NAHLKELMPGLTAKVFRTYNASITLD +LNKETKDG+V EKIAVYQ ANKEVAIICNHQR
Sbjct: 758  NAHLKELMPGLTAKVFRTYNASITLDDILNKETKDGSVPEKIAVYQHANKEVAIICNHQR 817

Query: 950  SVSKTHDAQMSRLNEKIEELKAQREELKEDLNRARKGKPPLKDAEGKPKRNMAPEMLAKK 771
            SVSK+H+ QMSRLNEKI +LKAQR+ELK DL+RARKGKPPLKD EGK K+N++PE++ KK
Sbjct: 818  SVSKSHENQMSRLNEKINDLKAQRDELKMDLSRARKGKPPLKDKEGKTKKNLSPEVIEKK 877

Query: 770  LSQVDAKIEKMELDKKIKDDLKTVALGTSKINYLDPRITVAWCKRYEVPIEKIFNKSLLA 591
            LSQVDAKIEK+ELDK+IK+DLKTVALGTSKINYLDPRI+VAWCKR+EVPIEKIFNKSLLA
Sbjct: 878  LSQVDAKIEKLELDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 937

Query: 590  KFTWAMDADPSFRF 549
            KF WAMD +P+FRF
Sbjct: 938  KFAWAMDVEPNFRF 951


>KMZ57043.1 DNA topoisomerase 1 [Zostera marina]
          Length = 971

 Score =  947 bits (2449), Expect = 0.0
 Identities = 484/691 (70%), Positives = 544/691 (78%), Gaps = 11/691 (1%)
 Frame = -3

Query: 2588 DHKPLAARFQ-NGSFKKGPLASGKPVSGLAKRPSTDDDKSALASNKKQKYSAGLTQNKI- 2415
            + KP A+  Q N SFK+ P  + K +    KRP      S  +SNKK K S     +K  
Sbjct: 295  EKKPSASMIQQNSSFKREPNGASKSIINANKRPLGSILNSVQSSNKKVKLSDSPAPSKTT 354

Query: 2414 ---------KQEHSDDDYSPISQTIXXXXXXXXXXXXXXKVLKKAISKPFKKEVDXXXXX 2262
                     +Q    DDY PIS+ I               V K+ ISKP + E +     
Sbjct: 355  KKLNLKEESRQSSDSDDYVPISRQIKKTISSNNKSPSKP-VSKRVISKPIQSEKNVKRSN 413

Query: 2261 XXXXXXXXXXKVPPGSGEGQKWTTLEHSGVIFPPSYKPHGVKMLYDGKPVDLTPEQEEVA 2082
                       V PGSGEGQKWTTLEH+GVIFPP YKPHG+K+LY+GKPVDLTPEQEEVA
Sbjct: 414  SSK--------VAPGSGEGQKWTTLEHNGVIFPPPYKPHGIKILYNGKPVDLTPEQEEVA 465

Query: 2081 TMFAVMKDTDYAAKKTFITNFWNDWKKVLGKNHVIKDFQRCDFTPIYEWHLKEKEKKKQM 1902
            TMFAVMKDT+YA KKTF+ NF +DWK +LG NHVIK  + CDFTPIY+WH++EKEKKK+M
Sbjct: 466  TMFAVMKDTEYAKKKTFLDNFMSDWKSILGANHVIKKLELCDFTPIYDWHMREKEKKKEM 525

Query: 1901 STXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIYP 1722
            S                K+MWAIVDGVKE+VGNFRVEPPGLFRGRGEHPKMGKLK+RI+P
Sbjct: 526  SAEEKKVLKEEKLQQEEKFMWAIVDGVKERVGNFRVEPPGLFRGRGEHPKMGKLKRRIFP 585

Query: 1721 HDITINIGKGAPIPECPIPGERWKEIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKG 1542
            HDITINIGK APIP+ PIPGERWKEIKHDNTVTWLAFWNDPIN KEFKYVFLAASSSLKG
Sbjct: 586  HDITINIGKSAPIPKSPIPGERWKEIKHDNTVTWLAFWNDPINIKEFKYVFLAASSSLKG 645

Query: 1541 QSDKEKYEKSRKLKDYIQTIRANYTKDFTSKDESRRQIAVATYLIDKLALRAGNEKDDDE 1362
            QSDKEKYEK+R LK+YI  IRANYT+DF +K+E +RQIAVATYLIDKLALRAGNEKDDDE
Sbjct: 646  QSDKEKYEKARMLKEYIHNIRANYTRDFNNKNEMKRQIAVATYLIDKLALRAGNEKDDDE 705

Query: 1361 ADTVGCCTLKVENVALVPPNKIQFDFLGKDSIRYFNTVDVEPAVYKAIGEFRXXXXXXXX 1182
            ADTVGCCTLKVENV LV PNK+QFDFLGKDSIRYFNTV+VE  VYKAIGEFR        
Sbjct: 706  ADTVGCCTLKVENVTLVQPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGEFR-----KVG 760

Query: 1181 XXKDSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDQMLNKETKDGTVQEKIA 1002
              ++ +DLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDQMLNKETKDG V EKIA
Sbjct: 761  EKENGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDQMLNKETKDGIVPEKIA 820

Query: 1001 VYQTANKEVAIICNHQRSVSKTHDAQMSRLNEKIEELKAQREELKEDLNRARKGKPPLKD 822
            VYQ+ANKEVAIICNHQRSVSK+H+AQM+R + KI ELK Q+EELK+DLNR RKGKP  KD
Sbjct: 821  VYQSANKEVAIICNHQRSVSKSHEAQMTRFDTKITELKDQQEELKDDLNRIRKGKPLSKD 880

Query: 821  AEGKPKRNMAPEMLAKKLSQVDAKIEKMELDKKIKDDLKTVALGTSKINYLDPRITVAWC 642
             +GK KRN++ E L KKLSQ+DAKIEK+ELDK++K+DLKTVALGTSKINYLDPRI+VAWC
Sbjct: 881  KDGKAKRNLSSEALEKKLSQIDAKIEKIELDKRLKEDLKTVALGTSKINYLDPRISVAWC 940

Query: 641  KRYEVPIEKIFNKSLLAKFTWAMDADPSFRF 549
            KR EVPIEKIFNKSLLAKF+WAMDA+P+FRF
Sbjct: 941  KRNEVPIEKIFNKSLLAKFSWAMDAEPTFRF 971


>NP_001157806.2 topoisomerase I [Zea mays] AQK50787.1 DNA topoisomerase 1 beta [Zea
            mays] AQK50788.1 DNA topoisomerase 1 beta [Zea mays]
            AQK50791.1 DNA topoisomerase 1 beta [Zea mays] AQK50793.1
            DNA topoisomerase 1 beta [Zea mays] AQK50804.1 DNA
            topoisomerase 1 beta [Zea mays]
          Length = 904

 Score =  943 bits (2438), Expect = 0.0
 Identities = 505/822 (61%), Positives = 587/822 (71%), Gaps = 14/822 (1%)
 Frame = -3

Query: 2972 VSMNKPPFKTAEPEDSDVDSDDYKPLSFRRSAAPVGINKDSXXXXXXXXPGDETXXXXXX 2793
            + M+K      + E SD DSDD  P+  RR         +            +T      
Sbjct: 104  IDMSKLKRPLVKDERSD-DSDDEVPIGLRRKV-------EEKKLKGVDTRVQKTDDSDDD 155

Query: 2792 DKPLSFKIPTSG-SGGPNNRSLPEKKLISSQRPITSISVSMNDXXXXXXXXXXXXSRGGR 2616
            DKPL  KI +S  S    N+ + ++ +   ++P      S +D             + G 
Sbjct: 156  DKPLGLKINSSRMSSNRVNKPVLQRTVPKVEQPDED---SDDDKPLASRLPSNAGPKSGG 212

Query: 2615 IDESSDSDGDHKPLAARFQN---------GSFKKGPLASGKPVSGLAKRPSTDDDKSALA 2463
             D S DS+ D KPLAARF            S  KG  +       L KRP  D+     +
Sbjct: 213  -DVSEDSE-DEKPLAARFSKVAGSGNPKIASSSKGLTSDTNGQQSLGKRP-LDNSNQTSS 269

Query: 2462 SNKKQKYSAGLTQNKIKQEHSDDDYSPISQTIXXXXXXXXXXXXXXKVLKK--AISKPFK 2289
            + KK K S       +++E   DD +P++Q +                 K   ++ K  K
Sbjct: 270  ALKKAKPSNVSASAIVRREIKTDDNTPLAQRLKMGESSKGKSSAKSVFKKSPASVKKDIK 329

Query: 2288 KEVDXXXXXXXXXXXXXXXK--VPPGSGEGQKWTTLEHSGVIFPPSYKPHGVKMLYDGKP 2115
            K                     VPPGSG G+KWTTLEH+GVIFPP YKPHGVKMLY+GKP
Sbjct: 330  KMKGKGKLKKNMKNSQFSKIMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGKP 389

Query: 2114 VDLTPEQEEVATMFAVMKDTDYAAKKTFITNFWNDWKKVLGKNHVIKDFQRCDFTPIYEW 1935
            +DLTPEQEEVATMFAVMKDTDYAAK TFI NF+ DW+KVLGKNH+IK+F+ CDFTPIYEW
Sbjct: 390  IDLTPEQEEVATMFAVMKDTDYAAKPTFIDNFFTDWRKVLGKNHIIKNFELCDFTPIYEW 449

Query: 1934 HLKEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHP 1755
            HL+EKE+KKQM+T               KYMWA+VDGVKEKVGNFRVEPPGLFRGRGEHP
Sbjct: 450  HLREKERKKQMTTEEKKTLREDKLKQEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHP 509

Query: 1754 KMGKLKKRIYPHDITINIGKGAPIPECPIPGERWKEIKHDNTVTWLAFWNDPINPKEFKY 1575
            KMGKLK+RI P DITINIGKGAP+PECPIPGE WKE+KHDNTVTWLAFWNDPINPK+FKY
Sbjct: 510  KMGKLKRRILPSDITINIGKGAPVPECPIPGESWKEVKHDNTVTWLAFWNDPINPKDFKY 569

Query: 1574 VFLAASSSLKGQSDKEKYEKSRKLKDYIQTIRANYTKDFTSKDESRRQIAVATYLIDKLA 1395
            VFLAASSSLKGQSDKEKYEKSRKLK +IQ IR NYTKDF +KD +RRQIAVATYLIDKLA
Sbjct: 570  VFLAASSSLKGQSDKEKYEKSRKLKGHIQRIRENYTKDFKNKDVTRRQIAVATYLIDKLA 629

Query: 1394 LRAGNEKDDDEADTVGCCTLKVENVALVPPNKIQFDFLGKDSIRYFNTVDVEPAVYKAIG 1215
            LRAGNEKDDDEADTVGCCTLKV+NV  +PPN+IQFDFLGKDSIRYFNTV+VE  VYKAI 
Sbjct: 630  LRAGNEKDDDEADTVGCCTLKVDNVTCMPPNQIQFDFLGKDSIRYFNTVEVEELVYKAIE 689

Query: 1214 EFRXXXXXXXXXXKDSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDQMLNKE 1035
             FR          K  +DLFDK+DTS+LNAHLK+LMPGLTAKVFRTYNASITLD +L++E
Sbjct: 690  GFR-------AGKKPGQDLFDKIDTSRLNAHLKDLMPGLTAKVFRTYNASITLDGILHEE 742

Query: 1034 TKDGTVQEKIAVYQTANKEVAIICNHQRSVSKTHDAQMSRLNEKIEELKAQREELKEDLN 855
            T+DGTV EKIAVYQ ANKEVAIICNHQRSVSK+H++QM+R+NEKI+ELK+Q EELK DLN
Sbjct: 743  TEDGTVLEKIAVYQRANKEVAIICNHQRSVSKSHESQMTRMNEKIDELKSQMEELKADLN 802

Query: 854  RARKGKPPLKDAEGKPKRNMAPEMLAKKLSQVDAKIEKMELDKKIKDDLKTVALGTSKIN 675
            +A+KGKP   D+EGKPKRN+APE + KK++ ++ KIEKME+DK+IK+DLKTVALGTSKIN
Sbjct: 803  KAKKGKPLGYDSEGKPKRNLAPEAIQKKVATLEGKIEKMEMDKRIKEDLKTVALGTSKIN 862

Query: 674  YLDPRITVAWCKRYEVPIEKIFNKSLLAKFTWAMDADPSFRF 549
            YLDPRITVAWCKR+EVPIEKIFNKSLLAKF WAMD DP FRF
Sbjct: 863  YLDPRITVAWCKRHEVPIEKIFNKSLLAKFVWAMDVDPEFRF 904


>ACS44671.1 DNA topoisomerase I [Zea mays]
          Length = 904

 Score =  942 bits (2435), Expect = 0.0
 Identities = 507/826 (61%), Positives = 589/826 (71%), Gaps = 18/826 (2%)
 Frame = -3

Query: 2972 VSMNKPPFKTAEPEDSDVDSDDYKPLSFRRSAAPVGINKDSXXXXXXXXPGDETXXXXXX 2793
            + M+K      + E SD DSDD  P+  RR         +            +T      
Sbjct: 104  IDMSKLKRPLVKDERSD-DSDDEVPIGLRRKV-------EEKKLKGVDTRVQKTDDSDDD 155

Query: 2792 DKPLSFKIPTSG-SGGPNNRSLPEKKLISSQRPITSISVSMNDXXXXXXXXXXXXSRGGR 2616
            DKPL  KI +S  S    N+ + ++ +   ++P      S +D             + G 
Sbjct: 156  DKPLGLKINSSRMSSNRVNKPVLQRTVPKVEQPDED---SDDDKPLASRLPSNAGPKSGG 212

Query: 2615 IDESSDSDGDHKPLAARFQN---------GSFKKGPLASGKPVSGLAKRP--STDDDKSA 2469
             D S DS+ D KPLAARF            S  KG  +       L KRP  S++   SA
Sbjct: 213  -DVSEDSE-DEKPLAARFSKVAGSGNPKIASSSKGLTSDTNGQQSLGKRPLDSSNQTSSA 270

Query: 2468 LASNKKQKYSAGLTQNKIKQEHSDDDYSPISQTIXXXXXXXXXXXXXXKVLKKAISKPFK 2289
            L   K    SA      +++E   DD +P++Q +                 K  +S   K
Sbjct: 271  LKKAKPSNVSASAI---VRREIKTDDNTPLAQRLKMGESSKGKSSAKSVFKKSPVS--VK 325

Query: 2288 KEVDXXXXXXXXXXXXXXXK------VPPGSGEGQKWTTLEHSGVIFPPSYKPHGVKMLY 2127
            K++                +      VPPGSG G+KWTTLEH+GVIFPP YKPHGVKMLY
Sbjct: 326  KDIKKMKGKGKLKKNMKNSQFSKIMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLY 385

Query: 2126 DGKPVDLTPEQEEVATMFAVMKDTDYAAKKTFITNFWNDWKKVLGKNHVIKDFQRCDFTP 1947
            +GKPVDLTPEQEEVATMFAVMKDTDYAAK TFI NF+ DW+KVLGKNH+IK+F+ CDFTP
Sbjct: 386  NGKPVDLTPEQEEVATMFAVMKDTDYAAKPTFIDNFFTDWRKVLGKNHIIKNFELCDFTP 445

Query: 1946 IYEWHLKEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGR 1767
            IYEWHL+EKE+KKQM+T               KYMWA+VDGVKEKVGNFRVEPPGLFRGR
Sbjct: 446  IYEWHLREKERKKQMTTEEKKTLREDNLKQEEKYMWAVVDGVKEKVGNFRVEPPGLFRGR 505

Query: 1766 GEHPKMGKLKKRIYPHDITINIGKGAPIPECPIPGERWKEIKHDNTVTWLAFWNDPINPK 1587
            GEHPKMGKLK+RI P DITINIGKGAP+PECPIPGE WKE+KHDNTVTWLAFWNDPINPK
Sbjct: 506  GEHPKMGKLKRRILPSDITINIGKGAPVPECPIPGESWKEVKHDNTVTWLAFWNDPINPK 565

Query: 1586 EFKYVFLAASSSLKGQSDKEKYEKSRKLKDYIQTIRANYTKDFTSKDESRRQIAVATYLI 1407
            +FKYVFLAASSSLKGQSDKEKYEKSRKLK +IQ IR NYTKDF +KD +RRQIAVATYLI
Sbjct: 566  DFKYVFLAASSSLKGQSDKEKYEKSRKLKGHIQRIRENYTKDFKNKDVTRRQIAVATYLI 625

Query: 1406 DKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKIQFDFLGKDSIRYFNTVDVEPAVY 1227
            DKLALRAGNEKDDDEADTVGCCTLKV+NV  +PPN+IQFDFLGKDSIRYFNTV+VE  VY
Sbjct: 626  DKLALRAGNEKDDDEADTVGCCTLKVDNVTCMPPNQIQFDFLGKDSIRYFNTVEVEELVY 685

Query: 1226 KAIGEFRXXXXXXXXXXKDSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDQM 1047
            KAI  FR          K  +DLFDK+DTS+LNAHLK+LMPGLTAKVFRTYNASITLD +
Sbjct: 686  KAIEGFR-------AGKKPGQDLFDKIDTSRLNAHLKDLMPGLTAKVFRTYNASITLDGI 738

Query: 1046 LNKETKDGTVQEKIAVYQTANKEVAIICNHQRSVSKTHDAQMSRLNEKIEELKAQREELK 867
            L++ET+DGTV EKIAVYQ ANKEVAIICN QRSVSK+H++QM+R+NEKI+ELK+Q EELK
Sbjct: 739  LHEETEDGTVLEKIAVYQRANKEVAIICNQQRSVSKSHESQMTRMNEKIDELKSQMEELK 798

Query: 866  EDLNRARKGKPPLKDAEGKPKRNMAPEMLAKKLSQVDAKIEKMELDKKIKDDLKTVALGT 687
             DLN+A+KGKP   D+EGKPKRN+APE + KK++ ++ KIEKME+DK+IK+DLKTVALGT
Sbjct: 799  ADLNKAKKGKPLGYDSEGKPKRNLAPEAIQKKVATLEGKIEKMEMDKRIKEDLKTVALGT 858

Query: 686  SKINYLDPRITVAWCKRYEVPIEKIFNKSLLAKFTWAMDADPSFRF 549
            SKINYLDPRITVAWCKR+EVPIEKIFNKSLLAKF WAMD DP FRF
Sbjct: 859  SKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFVWAMDVDPEFRF 904


>AQK50797.1 DNA topoisomerase 1 beta [Zea mays]
          Length = 737

 Score =  939 bits (2428), Expect = 0.0
 Identities = 479/705 (67%), Positives = 546/705 (77%), Gaps = 13/705 (1%)
 Frame = -3

Query: 2624 GGRIDESSDSDGDHKPLAARFQN---------GSFKKGPLASGKPVSGLAKRPSTDDDKS 2472
            GG + E S+   D KPLAARF            S  KG  +       L KRP  D+   
Sbjct: 44   GGDVSEDSE---DEKPLAARFSKVAGSGNPKIASSSKGLTSDTNGQQSLGKRP-LDNSNQ 99

Query: 2471 ALASNKKQKYSAGLTQNKIKQEHSDDDYSPISQTIXXXXXXXXXXXXXXKVLKK--AISK 2298
              ++ KK K S       +++E   DD +P++Q +                 K   ++ K
Sbjct: 100  TSSALKKAKPSNVSASAIVRREIKTDDNTPLAQRLKMGESSKGKSSAKSVFKKSPASVKK 159

Query: 2297 PFKKEVDXXXXXXXXXXXXXXXK--VPPGSGEGQKWTTLEHSGVIFPPSYKPHGVKMLYD 2124
              KK                     VPPGSG G+KWTTLEH+GVIFPP YKPHGVKMLY+
Sbjct: 160  DIKKMKGKGKLKKNMKNSQFSKIMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYN 219

Query: 2123 GKPVDLTPEQEEVATMFAVMKDTDYAAKKTFITNFWNDWKKVLGKNHVIKDFQRCDFTPI 1944
            GKP+DLTPEQEEVATMFAVMKDTDYAAK TFI NF+ DW+KVLGKNH+IK+F+ CDFTPI
Sbjct: 220  GKPIDLTPEQEEVATMFAVMKDTDYAAKPTFIDNFFTDWRKVLGKNHIIKNFELCDFTPI 279

Query: 1943 YEWHLKEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRG 1764
            YEWHL+EKE+KKQM+T               KYMWA+VDGVKEKVGNFRVEPPGLFRGRG
Sbjct: 280  YEWHLREKERKKQMTTEEKKTLREDKLKQEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRG 339

Query: 1763 EHPKMGKLKKRIYPHDITINIGKGAPIPECPIPGERWKEIKHDNTVTWLAFWNDPINPKE 1584
            EHPKMGKLK+RI P DITINIGKGAP+PECPIPGE WKE+KHDNTVTWLAFWNDPINPK+
Sbjct: 340  EHPKMGKLKRRILPSDITINIGKGAPVPECPIPGESWKEVKHDNTVTWLAFWNDPINPKD 399

Query: 1583 FKYVFLAASSSLKGQSDKEKYEKSRKLKDYIQTIRANYTKDFTSKDESRRQIAVATYLID 1404
            FKYVFLAASSSLKGQSDKEKYEKSRKLK +IQ IR NYTKDF +KD +RRQIAVATYLID
Sbjct: 400  FKYVFLAASSSLKGQSDKEKYEKSRKLKGHIQRIRENYTKDFKNKDVTRRQIAVATYLID 459

Query: 1403 KLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKIQFDFLGKDSIRYFNTVDVEPAVYK 1224
            KLALRAGNEKDDDEADTVGCCTLKV+NV  +PPN+IQFDFLGKDSIRYFNTV+VE  VYK
Sbjct: 460  KLALRAGNEKDDDEADTVGCCTLKVDNVTCMPPNQIQFDFLGKDSIRYFNTVEVEELVYK 519

Query: 1223 AIGEFRXXXXXXXXXXKDSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDQML 1044
            AI  FR          K  +DLFDK+DTS+LNAHLK+LMPGLTAKVFRTYNASITLD +L
Sbjct: 520  AIEGFR-------AGKKPGQDLFDKIDTSRLNAHLKDLMPGLTAKVFRTYNASITLDGIL 572

Query: 1043 NKETKDGTVQEKIAVYQTANKEVAIICNHQRSVSKTHDAQMSRLNEKIEELKAQREELKE 864
            ++ET+DGTV EKIAVYQ ANKEVAIICNHQRSVSK+H++QM+R+NEKI+ELK+Q EELK 
Sbjct: 573  HEETEDGTVLEKIAVYQRANKEVAIICNHQRSVSKSHESQMTRMNEKIDELKSQMEELKA 632

Query: 863  DLNRARKGKPPLKDAEGKPKRNMAPEMLAKKLSQVDAKIEKMELDKKIKDDLKTVALGTS 684
            DLN+A+KGKP   D+EGKPKRN+APE + KK++ ++ KIEKME+DK+IK+DLKTVALGTS
Sbjct: 633  DLNKAKKGKPLGYDSEGKPKRNLAPEAIQKKVATLEGKIEKMEMDKRIKEDLKTVALGTS 692

Query: 683  KINYLDPRITVAWCKRYEVPIEKIFNKSLLAKFTWAMDADPSFRF 549
            KINYLDPRITVAWCKR+EVPIEKIFNKSLLAKF WAMD DP FRF
Sbjct: 693  KINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFVWAMDVDPEFRF 737


>XP_006659124.1 PREDICTED: DNA topoisomerase 1-like [Oryza brachyantha]
          Length = 911

 Score =  938 bits (2424), Expect = 0.0
 Identities = 501/834 (60%), Positives = 589/834 (70%), Gaps = 27/834 (3%)
 Frame = -3

Query: 2969 SMNKPPFKTAEPEDSDVDS-DDYKPLSFRRSAAPVGINKDSXXXXXXXXPGDETXXXXXX 2793
            +M+K   K    ED   DS DD+KP+  RR        K +         G ET      
Sbjct: 99   AMDKSKLKRPFVEDKSDDSEDDHKPIGLRRKVEDKNFKKAAV--------GSETADDSDD 150

Query: 2792 DKPLSFKIPTSGSGGPNNRSLPEKKLISSQRPITSISVSMNDXXXXXXXXXXXXSRGGRI 2613
            +KPLS KI ++ +  P+N +     L  + + +     S ++             + G  
Sbjct: 151  NKPLSLKINSTKT--PSNSTNKASVLKVTPKIVQPADDSEDEKPLARRLPAKTTLKSGA- 207

Query: 2612 DESSDSDGDHKPLAARFQN--GSFKKGPLASGKPVSGLAKRPST---------------- 2487
              +SD   D KPLAARF    GS      +S   V     +PS+                
Sbjct: 208  -NASDDSEDEKPLAARFSKVTGSASASISSSKDKVQSANLKPSSSSKVSNNDTNTSRNSI 266

Query: 2486 ----DDDKSALASNKKQKYSAGLTQNKIKQEHS--DDDYSPISQTIXXXXXXXXXXXXXX 2325
                D++  ++++ KK + S       +K+E    D+D  P+SQ +              
Sbjct: 267  KRPIDNNNQSISALKKARPSDVSVSASVKRESKADDNDNIPLSQRLKMGESSKSKPPAKN 326

Query: 2324 KVLKKAISKPFKKEVDXXXXXXXXXXXXXXXK--VPPGSGEGQKWTTLEHSGVIFPPSYK 2151
             V K   S  FKK+                    VPPGSG GQKWTTL H+GVIFPP YK
Sbjct: 327  IVKKNPSS--FKKDSKKMKTKKTMKNSQFSKTMKVPPGSGGGQKWTTLVHNGVIFPPPYK 384

Query: 2150 PHGVKMLYDGKPVDLTPEQEEVATMFAVMKDTDYAAKKTFITNFWNDWKKVLGKNHVIKD 1971
            PHGVKMLY+G+PVDLTPEQEEVATMF+VMKDTDYA+K+TFI NF+ DW+K+LGKNH+IK 
Sbjct: 385  PHGVKMLYNGQPVDLTPEQEEVATMFSVMKDTDYASKQTFIDNFFTDWRKILGKNHIIKK 444

Query: 1970 FQRCDFTPIYEWHLKEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVE 1791
            F+ CDFTPIYEWHL+EKEKKKQM++               KYMWA+VDGVKEKVGNFRVE
Sbjct: 445  FELCDFTPIYEWHLREKEKKKQMTSEEKKAVKEEKLKQEEKYMWAVVDGVKEKVGNFRVE 504

Query: 1790 PPGLFRGRGEHPKMGKLKKRIYPHDITINIGKGAPIPECPIPGERWKEIKHDNTVTWLAF 1611
            PPGLFRGRGEHPKMGKLK+RI P DITINIGKGAPIPECPIPGE WKE+KHDNTVTWLAF
Sbjct: 505  PPGLFRGRGEHPKMGKLKRRIQPSDITINIGKGAPIPECPIPGESWKEVKHDNTVTWLAF 564

Query: 1610 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKDYIQTIRANYTKDFTSKDESRRQ 1431
            WNDPI+ K+FKYVFLAASS+LKGQSDKEKYEKSRKLK +I  IR  YTKDF SKD++++Q
Sbjct: 565  WNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRKLKHHIHKIRDTYTKDFRSKDKTKKQ 624

Query: 1430 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKIQFDFLGKDSIRYFNT 1251
            IAVATYLIDKLALRAGNEKDDDEA+TVGCCTLKV+NV  VPPN +QFDFLGKDSIRYFNT
Sbjct: 625  IAVATYLIDKLALRAGNEKDDDEAETVGCCTLKVDNVTCVPPNNLQFDFLGKDSIRYFNT 684

Query: 1250 VDVEPAVYKAIGEFRXXXXXXXXXXKDSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYN 1071
            V+VE  VYKAI EFR          K  +DLFDKLDT++LNAHLK+LMPGLTAKVFRTYN
Sbjct: 685  VEVELPVYKAIEEFR-------AGKKPGDDLFDKLDTTRLNAHLKDLMPGLTAKVFRTYN 737

Query: 1070 ASITLDQMLNKETKDGTVQEKIAVYQTANKEVAIICNHQRSVSKTHDAQMSRLNEKIEEL 891
            ASITLD +L+KET+DGT+ EKIAVYQ ANKEVAIICNHQRSVSK+HD+QM+RLNEKI+EL
Sbjct: 738  ASITLDDILHKETEDGTLLEKIAVYQRANKEVAIICNHQRSVSKSHDSQMTRLNEKIDEL 797

Query: 890  KAQREELKEDLNRARKGKPPLKDAEGKPKRNMAPEMLAKKLSQVDAKIEKMELDKKIKDD 711
            KAQR+ELK DL++ +KGK    D +GKPKRN+APE   KK+SQV+ KIEKME+DKKIK+D
Sbjct: 798  KAQRDELKADLSKVKKGKSLGYDKDGKPKRNLAPEAFEKKISQVETKIEKMEMDKKIKED 857

Query: 710  LKTVALGTSKINYLDPRITVAWCKRYEVPIEKIFNKSLLAKFTWAMDADPSFRF 549
            LKTVALGTSKINYLDPRITVAWCKR+EVPIEKIFNKSL+AKF+WAMD DP FRF
Sbjct: 858  LKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLIAKFSWAMDVDPDFRF 911


>EOY12189.1 DNA topoisomerase I alpha isoform 1 [Theobroma cacao] EOY12190.1 DNA
            topoisomerase I alpha isoform 1 [Theobroma cacao]
          Length = 904

 Score =  937 bits (2422), Expect = 0.0
 Identities = 521/894 (58%), Positives = 589/894 (65%), Gaps = 40/894 (4%)
 Frame = -3

Query: 3110 DQNSPNCENTYSRGNKEVSISNL--LKSDQVDMVLTSKKVEGLP---------------D 2982
            D  SPN +++ +  NK +S S    +KS  +    ++   + LP               D
Sbjct: 59   DVRSPNGQSSNAPKNKSISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLND 118

Query: 2981 QPK----------VSMNKPPFK-TAEPEDSDVDSDDYKPLSFRRSAAPVGINKDSXXXXX 2835
            Q K          V   + P K T EP   D D DD  PLS R        NK       
Sbjct: 119  QSKQALKQNMTTAVKEGRSPIKGTTEPNSDDDDDDDSLPLSARLKGISNQGNK------- 171

Query: 2834 XXXPGDETXXXXXXDKPLSFKIPTSGSGGPNNRSLPEKKLISSQRPITSISVSMNDXXXX 2655
                                       G   +     ++L+    P T + VS  D    
Sbjct: 172  ---------------------------GASTSAPAQSRRLV----PKTEVKVSAEDPDDE 200

Query: 2654 XXXXXXXXSRGGRIDESS---DSDGDHKPLAARFQ-NGSFKKGPLASGKPVSGLAKRPST 2487
                     +      SS   D D + KPLA++ Q NGS  KG   +   +SG  KRP  
Sbjct: 201  APLSARFNVKSNTGTSSSRLHDCD-EKKPLASKIQQNGSIMKGKQQNSSTLSG--KRPLD 257

Query: 2486 DDDKSALASNKKQKYSAGLTQNKIKQ-------EHSDDDYSPISQTIXXXXXXXXXXXXX 2328
              + S  +S KK K S   T  K KQ          DDD+ PI+Q +             
Sbjct: 258  KGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAEKADEDDDHMPIAQRMKKSTASNSKLSSM 317

Query: 2327 XKVLKKAISKPFKKEVDXXXXXXXXXXXXXXXKVPPGSGEGQK-WTTLEHSGVIFPPSYK 2151
             +   K +S  FKK                  KVPP SG+GQK W+TL H+GVIFP  Y 
Sbjct: 318  KQKTTKVVSSSFKKINKKSKKEMKSSKYIKSTKVPPSSGDGQKKWSTLVHNGVIFPSPYT 377

Query: 2150 PHGVKMLYDGKPVDLTPEQEEVATMFAVMKDTDYAAKKTFITNFWNDWKKVLGKNHVIKD 1971
            PHGVKMLYDG+PVDLTPEQEEVATMFAVMKDTDY +K  F  NFW DW K+LGKNH IKD
Sbjct: 378  PHGVKMLYDGRPVDLTPEQEEVATMFAVMKDTDYMSKTQFKKNFWEDWSKLLGKNHTIKD 437

Query: 1970 FQRCDFTPIYEWHLKEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVE 1791
              RCDFTPIYEWHL+EKEKKKQMS+               K+MWAIVDGVKEKVGNFRVE
Sbjct: 438  LDRCDFTPIYEWHLQEKEKKKQMSSEEKKALKEEKLKQEEKFMWAIVDGVKEKVGNFRVE 497

Query: 1790 PPGLFRGRGEHPKMGKLKKRIYPHDITINIGKGAPIPECPIPGERWKEIKHDNTVTWLAF 1611
            PPGLFRGRGEHPKMGKLK+RI P DITINIGK APIPECPIPGERWK+IKHDNTVTWLAF
Sbjct: 498  PPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPIPGERWKDIKHDNTVTWLAF 557

Query: 1610 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRKLKDYIQTIRANYTKDFTSKDESRRQ 1431
            WNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+R LKDYI+ IRA YTKDFT+KD  +RQ
Sbjct: 558  WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRAAYTKDFTTKDVMKRQ 617

Query: 1430 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKIQFDFLGKDSIRYFNT 1251
            IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV  +PPNK++FDFLGKDSI+Y NT
Sbjct: 618  IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNT 677

Query: 1250 VDVEPAVYKAIGEFRXXXXXXXXXXKDSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYN 1071
            V+VE  VYKAIG+F+            S+DLFDKLDTSKLNAHLKELMPGLTAKVFRTYN
Sbjct: 678  VEVELPVYKAIGQFQ-------TGKSKSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYN 730

Query: 1070 ASITLDQMLNKETKDGTVQEKIAVYQTANKEVAIICNHQRSVSKTHDAQMSRLNEKIEEL 891
            ASITLD+MLNKETKDG V EK+ VYQ ANKEVAIICNHQRS+SK+H AQMSRL EKI EL
Sbjct: 731  ASITLDEMLNKETKDGDVAEKVVVYQRANKEVAIICNHQRSISKSHSAQMSRLTEKITEL 790

Query: 890  KAQREELKEDLNRARKGKPPLKDAEGKPKRNMAPEMLAKKLSQVDAKIEKMELDKKIKDD 711
            K   +ELK DL+RA+KGKPPLKDA+GK KRN+ P+ + KK+ Q +AKIEKME D + K+D
Sbjct: 791  KGVLKELKIDLDRAKKGKPPLKDADGKQKRNLTPQAIQKKIDQTNAKIEKMERDMQTKED 850

Query: 710  LKTVALGTSKINYLDPRITVAWCKRYEVPIEKIFNKSLLAKFTWAMDADPSFRF 549
            LKTVALGTSKINYLDPRITVAWCKR+EVPIEKIFNKSLLAKF WAMD DP FRF
Sbjct: 851  LKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 904