BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00008642
         (2147 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_009394449.1 PREDICTED: CRM-domain containing factor CFM3, chl...   753   0.0  
KMZ73878.1 Chloroplastic group IIA intron splicing facilitator C...   743   0.0  
XP_010917579.1 PREDICTED: CRM-domain containing factor CFM3, chl...   736   0.0  
ONK60599.1 uncharacterized protein A4U43_C08F20320 [Asparagus of...   731   0.0  
JAT61837.1 Chloroplastic group IIA intron splicing facilitator C...   735   0.0  
XP_008802838.1 PREDICTED: CRM-domain containing factor CFM3, chl...   733   0.0  
OAY80896.1 Chloroplastic group IIA intron splicing facilitator C...   724   0.0  
XP_010278136.1 PREDICTED: CRM-domain containing factor CFM3A, ch...   724   0.0  
XP_010278134.1 PREDICTED: CRM-domain containing factor CFM3A, ch...   724   0.0  
XP_010278131.1 PREDICTED: CRM-domain containing factor CFM3A, ch...   724   0.0  
XP_020104237.1 CRM-domain containing factor CFM3, chloroplastic/...   723   0.0  
XP_015887836.1 PREDICTED: CRM-domain containing factor CFM3A, ch...   707   0.0  
OAY55643.1 hypothetical protein MANES_03G169200 [Manihot esculenta]   704   0.0  
XP_011091130.1 PREDICTED: chloroplastic group IIA intron splicin...   703   0.0  
XP_012473005.1 PREDICTED: chloroplastic group IIA intron splicin...   701   0.0  
XP_002280226.1 PREDICTED: CRM-domain containing factor CFM3A, ch...   702   0.0  
XP_017621388.1 PREDICTED: CRM-domain containing factor CFM3A, ch...   701   0.0  
GAV69603.1 CRS1_YhbY domain-containing protein [Cephalotus folli...   700   0.0  
XP_016712545.1 PREDICTED: CRM-domain containing factor CFM3A, ch...   700   0.0  
XP_006838849.1 PREDICTED: chloroplastic group IIA intron splicin...   700   0.0  

>XP_009394449.1 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial-like [Musa acuminata subsp.
            malaccensis]
          Length = 918

 Score =  753 bits (1945), Expect = 0.0
 Identities = 396/602 (65%), Positives = 464/602 (77%), Gaps = 11/602 (1%)
 Frame = +3

Query: 3    ATPRKKRSKXXXXXXXXXXXXXXXXXXXAIRTKSRTKIGGAGVTKEIVDKIHEKWQTEEV 182
            A+ RK RSK                   AIRTKS+TKIGGAGVTKEIVD IHEKW+TEEV
Sbjct: 189  ASARKTRSKTSLAELTLPEGELRRLRHLAIRTKSKTKIGGAGVTKEIVDLIHEKWKTEEV 248

Query: 183  VRLKCEGPPALNMKRMHEILERKTGGLVIWRSGSSISLYRGVTYVNSEMERHRWNTERSK 362
            VRLKCEGPPALNMKRMHEILERKTGGLVIWRSG+SISLYRGVTY   ++ +  +   +S 
Sbjct: 249  VRLKCEGPPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVTYEIPQLVKRPY---QSN 305

Query: 363  AGSSNNTHNDKLLQISTAGLETRKGNASHEMTP-----------RAIEPLKEVNYESEVD 509
              +S ++    L   + A +E  +G  SH   P           + +E   ++ YESE+D
Sbjct: 306  QRASLDSFKQPLGYRAEAFVENGRG--SHVAGPIEHLTVKVEEEKDVESPPKIEYESEID 363

Query: 510  KLLDGLGPRYTDWSGFDPLPVDADLLPGVVPGYKPPFRVLPYGVRPHLGVKDQTALRRLA 689
            KLLD LGPRYTDW G  P PVDADLLP VVPGYKPPFR+LPYGVRP LG+K+ TALRRLA
Sbjct: 364  KLLDDLGPRYTDWPGSGPPPVDADLLPSVVPGYKPPFRILPYGVRPSLGLKEGTALRRLA 423

Query: 690  RVLPPHFALGRSRQHQGLAAAIVKLWEKSLIAKVALKRGVQLTSSERMAEEIKRLTGGSL 869
            R LPPHFALGRSRQHQGLAAA+VKLWEKS IAK++LKRGVQLTSSERMAE+IK+LTGG++
Sbjct: 424  RALPPHFALGRSRQHQGLAAAMVKLWEKSSIAKISLKRGVQLTSSERMAEDIKKLTGGAI 483

Query: 870  LCRNKEYIVFYRGKDFLAPEVANXXXXXXXXXXXXXXXXXXXXXXXSSSISLNLGTFEDA 1049
            L RNK+YIVFYRGKDFL+PEV                         SSS++ ++ +F+++
Sbjct: 484  LSRNKDYIVFYRGKDFLSPEVTEALLERERLAKALQDEEEQARLRASSSVASDVDSFDES 543

Query: 1050 GTTGTLKETLEANARWGKQLSENAKDELVKAAELERHGVLVRKLERQLSMAERKMMKAEK 1229
            GT GTL ETLEA ARWG  + ++  D++++AAE+ RH  LV+KLER+L +AERK+ KA K
Sbjct: 544  GTAGTLNETLEAAARWGNNIGDDHMDKMMRAAEMARHAGLVKKLERKLFIAERKLTKAGK 603

Query: 1230 GLAQVEEFLKPSETGSVHESITDEERYMFRKLGLKMKAYLLLGRRGVFDGTVENMHLHWK 1409
             LA+VEE LKP+E     E+ITDEER+MFRKLGL+MKA+LLLGRRGVFDGT+ENMHLHWK
Sbjct: 604  ALAKVEESLKPTEHVKDPEAITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWK 663

Query: 1410 YRELVKIIVKAKTFAQVKNVALALEAESGGILVSVDKISKGFAIIVFRGKDYRRPTSLRP 1589
            YRELVKIIVKAKTFAQV+NVALALEAESGG+LVSVDKISKGFAIIV+RGKDY RP +LRP
Sbjct: 664  YRELVKIIVKAKTFAQVQNVALALEAESGGVLVSVDKISKGFAIIVYRGKDYHRPPTLRP 723

Query: 1590 KNLLTKRKALARSIELQRREALQHHISNLQTKVERLRKELDQMETVKKHGNEELYAKLDV 1769
            KNLLTKRKALARSIELQRREAL  HISN+Q KVE+LR EL  ++ VK HG+EELYA LD 
Sbjct: 724  KNLLTKRKALARSIELQRREALNRHISNVQKKVEQLRSELVHLDNVKDHGDEELYANLDS 783

Query: 1770 AY 1775
            AY
Sbjct: 784  AY 785


>KMZ73878.1 Chloroplastic group IIA intron splicing facilitator CRS1 [Zostera
            marina]
          Length = 847

 Score =  743 bits (1917), Expect = 0.0
 Identities = 400/601 (66%), Positives = 455/601 (75%), Gaps = 11/601 (1%)
 Frame = +3

Query: 12   RKKRSKXXXXXXXXXXXXXXXXXXXAIRTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRL 191
            R+K SK                   AIRTKS+TK+GG+G+TKEIVDKIH KWQT+EVVRL
Sbjct: 177  RRKESKSTVAELTLPEGELKRLRHLAIRTKSKTKVGGSGITKEIVDKIHTKWQTDEVVRL 236

Query: 192  KCEGPPALNMKRMHEILERKTGGLVIWRSGSSISLYRGVTYVNSEMERHRWN------TE 353
            KCEGPPALNMKRMHEILERKTGGLVIWRSGSSISLYRGV+Y   +   H+ +      T 
Sbjct: 237  KCEGPPALNMKRMHEILERKTGGLVIWRSGSSISLYRGVSYDIPQPVEHQSSYFTKNKTI 296

Query: 354  RSKAGSS-NNTHNDK----LLQISTAGLETRKGNASHEMTPRAIEPLKEVNYESEVDKLL 518
                GS   N   DK     L    AG+     N+    T  +  P  EV YE E+D LL
Sbjct: 297  YKPTGSPVQNYRTDKKYVETLHRGDAGVSNVDDNSD---TASSSPP--EVKYEHEMDSLL 351

Query: 519  DGLGPRYTDWSGFDPLPVDADLLPGVVPGYKPPFRVLPYGVRPHLGVKDQTALRRLARVL 698
            D LGPR TDW+G DPLPVDADLLPG VPGYKPPFR+LPYGVR  LG+KDQTALRRLAR L
Sbjct: 352  DNLGPRCTDWTGCDPLPVDADLLPGFVPGYKPPFRILPYGVRRSLGMKDQTALRRLARRL 411

Query: 699  PPHFALGRSRQHQGLAAAIVKLWEKSLIAKVALKRGVQLTSSERMAEEIKRLTGGSLLCR 878
            PPHFAL RSRQHQGLA A+VKLWEKS IAK+ALKRGVQLT+SERMAE+I++LTGG LLCR
Sbjct: 412  PPHFALRRSRQHQGLATAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIRKLTGGVLLCR 471

Query: 879  NKEYIVFYRGKDFLAPEVANXXXXXXXXXXXXXXXXXXXXXXXSSSISLNLGTFEDAGTT 1058
            NK+YIVFYRGKDFLAPE+                         SS I  N  T E  G T
Sbjct: 472  NKDYIVFYRGKDFLAPELTEALLERERLARDLQDKEEEARVNASSLIFDNTPTVE-YGDT 530

Query: 1059 GTLKETLEANARWGKQLSENAKDELVKAAELERHGVLVRKLERQLSMAERKMMKAEKGLA 1238
            GTLKET EANARWGKQL +N KD+++KAA+++RH  LVRKLER+  +A++K+ KAEK L 
Sbjct: 531  GTLKETQEANARWGKQLGDNDKDKMLKAADVKRHADLVRKLERKFVVAKKKLTKAEKALG 590

Query: 1239 QVEEFLKPSETGSVHESITDEERYMFRKLGLKMKAYLLLGRRGVFDGTVENMHLHWKYRE 1418
            +VEEFLKP+E  +  ESI+DEER+MFRKLGLKMKA+LLLGRRGVFDGTVENMHLHWKYRE
Sbjct: 591  KVEEFLKPAENNNDPESISDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRE 650

Query: 1419 LVKIIVKAKTFAQVKNVALALEAESGGILVSVDKISKGFAIIVFRGKDYRRPTSLRPKNL 1598
            LVKIIVKAKTFAQV+NVAL+LEAESGGILVSVDKISKGFAIIV+RG+DY RP  LRPKNL
Sbjct: 651  LVKIIVKAKTFAQVRNVALSLEAESGGILVSVDKISKGFAIIVYRGRDYHRPCLLRPKNL 710

Query: 1599 LTKRKALARSIELQRREALQHHISNLQTKVERLRKELDQMETVKKHGNEELYAKLDVAYP 1778
            LTKRKALARSIELQR+ AL  H+SN+  +VE+L+ EL QME VK+HG+EELY KLD  Y 
Sbjct: 711  LTKRKALARSIELQRQGALNLHLSNMHKRVEKLKSELAQMEEVKEHGDEELYCKLDSTYL 770

Query: 1779 S 1781
            S
Sbjct: 771  S 771


>XP_010917579.1 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Elaeis guineensis]
          Length = 883

 Score =  736 bits (1901), Expect = 0.0
 Identities = 389/607 (64%), Positives = 459/607 (75%), Gaps = 16/607 (2%)
 Frame = +3

Query: 3    ATPRKKRSKXXXXXXXXXXXXXXXXXXXAIRTKSRTKIGGAGVTKEIVDKIHEKWQTEEV 182
            ++ RK+RSK                   A+R KS+TKI GAGVTKEIVD IHE+W+T EV
Sbjct: 203  SSARKRRSKTSLAELTLPEGELRRLRHMAVRIKSKTKIKGAGVTKEIVDLIHEQWKTTEV 262

Query: 183  VRLKCEGPPALNMKRMHEILERKTGGLVIWRSGSSISLYRGVTYVNSEMERHRW-NTERS 359
            VRLKCEG PALNMKR HEILERKTGGLVIWRSG+SISLYRGV Y     E+ ++ N +RS
Sbjct: 263  VRLKCEGAPALNMKRTHEILERKTGGLVIWRSGTSISLYRGVGYEILLPEKRQYQNVQRS 322

Query: 360  KAGSSN---------NTHNDK------LLQISTAGLETRKGNASHEMTPRAIEPLKEVNY 494
               + N         +T N +      L + STA LE +K            EP  E+ Y
Sbjct: 323  AVDTFNKGTYHPTGVSTANGRGNNVQDLQEDSTASLEKKKDT----------EPDAEIKY 372

Query: 495  ESEVDKLLDGLGPRYTDWSGFDPLPVDADLLPGVVPGYKPPFRVLPYGVRPHLGVKDQTA 674
            E E+DKLLDGLGPRYTDW G DPLPVDADLLP +VPGYKPPFR+LPYGVR  LG+K+ TA
Sbjct: 373  EREIDKLLDGLGPRYTDWPGSDPLPVDADLLPSLVPGYKPPFRILPYGVRRTLGLKEGTA 432

Query: 675  LRRLARVLPPHFALGRSRQHQGLAAAIVKLWEKSLIAKVALKRGVQLTSSERMAEEIKRL 854
            LRRLAR+LPPHFALGRSRQHQGLAAA+VKLWEKS IAK+ALKRGVQLT SERMAEEIK+L
Sbjct: 433  LRRLARLLPPHFALGRSRQHQGLAAAMVKLWEKSSIAKIALKRGVQLTMSERMAEEIKKL 492

Query: 855  TGGSLLCRNKEYIVFYRGKDFLAPEVANXXXXXXXXXXXXXXXXXXXXXXXSSSISLNLG 1034
            TGG +L  NK+Y+VFYRGKDFLAPEV                         SSS+  N  
Sbjct: 493  TGGMILSSNKDYLVFYRGKDFLAPEVTEALLERERLAKTLQDKEEQARLRASSSVVSNFE 552

Query: 1035 TFEDAGTTGTLKETLEANARWGKQLSENAKDELVKAAELERHGVLVRKLERQLSMAERKM 1214
              ++ GT GTL ETLEA+ARWG +L ++  +++++AAE+ RH  LVRKLER+LS+AER++
Sbjct: 553  IADEPGTAGTLGETLEADARWGNRLDQDHMEKMMRAAEMARHADLVRKLERRLSIAERRL 612

Query: 1215 MKAEKGLAQVEEFLKPSETGSVHESITDEERYMFRKLGLKMKAYLLLGRRGVFDGTVENM 1394
            MKAEK L++VEE LKP+E  +  ESITDEER+MFRKLGL+MKA+LLLGRRGVF GTVENM
Sbjct: 613  MKAEKALSKVEESLKPAEHAADPESITDEERFMFRKLGLRMKAFLLLGRRGVFAGTVENM 672

Query: 1395 HLHWKYRELVKIIVKAKTFAQVKNVALALEAESGGILVSVDKISKGFAIIVFRGKDYRRP 1574
            HLHWKYRELVK+IVK KTF Q K++AL+LE+ESGG+LVSVDK+SKGFAIIV+RGKDY+RP
Sbjct: 673  HLHWKYRELVKVIVKTKTFEQAKHIALSLESESGGVLVSVDKVSKGFAIIVYRGKDYQRP 732

Query: 1575 TSLRPKNLLTKRKALARSIELQRREALQHHISNLQTKVERLRKELDQMETVKKHGNEELY 1754
             +LRPKNLLTKRKALARSIELQR EA+ HHISNLQ +VE+LR EL QM+ VK  G+E+LY
Sbjct: 733  PALRPKNLLTKRKALARSIELQRHEAISHHISNLQKRVEQLRSELVQMDNVKDQGDEDLY 792

Query: 1755 AKLDVAY 1775
            AKLD AY
Sbjct: 793  AKLDSAY 799


>ONK60599.1 uncharacterized protein A4U43_C08F20320 [Asparagus officinalis]
          Length = 801

 Score =  731 bits (1887), Expect = 0.0
 Identities = 391/606 (64%), Positives = 460/606 (75%), Gaps = 18/606 (2%)
 Frame = +3

Query: 12   RKKRSKXXXXXXXXXXXXXXXXXXXAIRTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRL 191
            R+KRSK                   AIRTKS+TKI GAGVTKEIVD IHEKW+TEEVVRL
Sbjct: 187  RRKRSKTTVAELTLPEGELRRLRHLAIRTKSKTKIKGAGVTKEIVDLIHEKWRTEEVVRL 246

Query: 192  KCEGPPALNMKRMHEILERKTGGLVIWRSGSSISLYRGVTYVNSEMERHRWNTERSK--A 365
            KCEGPPALNMKRMHEILERKTGGLVIWRSGSSISLYRGV+Y   +  +  +   ++    
Sbjct: 247  KCEGPPALNMKRMHEILERKTGGLVIWRSGSSISLYRGVSYETPQPVKKPYQIIQTTEVV 306

Query: 366  GSSNNTHNDKLLQISTAGLETRKGNAS---HEMTP------RAIEPLKEVNYESEVDKLL 518
              SN T+       S+  L    G+A    H   P      + IE   EV YESE+D LL
Sbjct: 307  PFSNATYGG-----SSRNLTETSGDAMERPHVSLPAPFERKQDIESPSEVKYESEMDSLL 361

Query: 519  DGLGPRYTDWSGFDPLPVDADLLPGVVPGYKPPFRVLPYGVRPHLGVKDQTALRRLARVL 698
            D LGPRY DW G DPLPVDAD+LPG+V GYKPPFR+LPYGVRP LG K+ T LRRLARVL
Sbjct: 362  DSLGPRYDDWPGPDPLPVDADMLPGIVHGYKPPFRILPYGVRPSLGYKEGTGLRRLARVL 421

Query: 699  PPHFALGRSRQHQGLAAAIVKLWEKSLIAKVALKRGVQLTSSERMAEEIKRLTGGSLLCR 878
            PPHFALGRSRQHQGLAAA++KLWE+S IAK+ALKRGVQLT+SERMAE+IK+LTGG++L R
Sbjct: 422  PPHFALGRSRQHQGLAAAMLKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGGTILSR 481

Query: 879  NKEYIVFYRGKDFLAPEVANXXXXXXXXXXXXXXXXXXXXXXXSSSISLN------LGT- 1037
            NK+YIVF+RGKDFL+PE+                         S+ +  +      +GT 
Sbjct: 482  NKDYIVFFRGKDFLSPELTEALLERERMAKTLQDEEEQARLRASALVISSVEKVDEMGTE 541

Query: 1038 FEDAGTTGTLKETLEANARWGKQLSENAKDELVKAAELERHGVLVRKLERQLSMAERKMM 1217
             +++GTTGTL ETLEA+ARWG ++ E+  +++++AAE  RH  LVRKLER+L +AERK+ 
Sbjct: 542  VQESGTTGTLGETLEADARWGSKIDEDHANKMMRAAEAARHADLVRKLERKLFLAERKLS 601

Query: 1218 KAEKGLAQVEEFLKPSETGSVHESITDEERYMFRKLGLKMKAYLLLGRRGVFDGTVENMH 1397
            KAE+ L +VEE LKP+E  +  E+ITDEER+MFRKLGL+MKA+LLLGRRGVF GTVENMH
Sbjct: 602  KAERALVKVEESLKPAERPAEPETITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMH 661

Query: 1398 LHWKYRELVKIIVKAKTFAQVKNVALALEAESGGILVSVDKISKGFAIIVFRGKDYRRPT 1577
            LHWKYRELVK+I+KAKTFAQVKNVALALEAESGGIL+SVDKISKGFAIIV+RGKDY+RP+
Sbjct: 662  LHWKYRELVKVIIKAKTFAQVKNVALALEAESGGILISVDKISKGFAIIVYRGKDYQRPS 721

Query: 1578 SLRPKNLLTKRKALARSIELQRREALQHHISNLQTKVERLRKELDQMETVKKHGNEELYA 1757
            SLRPKNLLTKRKALARSIELQRREAL HHIS L  +VE L+ EL QME VK+ G+EELY+
Sbjct: 722  SLRPKNLLTKRKALARSIELQRREALNHHISTLYRRVEALKSELCQMEDVKEQGDEELYS 781

Query: 1758 KLDVAY 1775
            KLD AY
Sbjct: 782  KLDSAY 787


>JAT61837.1 Chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic, partial [Anthurium amnicola]
          Length = 931

 Score =  735 bits (1897), Expect = 0.0
 Identities = 376/570 (65%), Positives = 457/570 (80%), Gaps = 7/570 (1%)
 Frame = +3

Query: 87   AIRTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRLKCEGPPALNMKRMHEILERKTGGLV 266
            AIRTKS+TKIGGAGVT+EIVD IHEKW+TEEVVRLKCEGPPALNMKRMHEILERKTGGLV
Sbjct: 280  AIRTKSKTKIGGAGVTREIVDMIHEKWKTEEVVRLKCEGPPALNMKRMHEILERKTGGLV 339

Query: 267  IWRSGSSISLYRGVTYVNSEMERHR-WNTERSKAGSSNNTHNDKL---LQISTAGLETR- 431
            IWRSGSSISLYRG+ +  ++ E+ R  +T  ++  S +   ++++   L++       R 
Sbjct: 340  IWRSGSSISLYRGLGFELAQPEKSRNQSTHITRVVSFDKASDERIGSPLEMDEHSSNMRA 399

Query: 432  --KGNASHEMTPRAIEPLKEVNYESEVDKLLDGLGPRYTDWSGFDPLPVDADLLPGVVPG 605
              +G+ S     +  E  KE+NYE EVDKLLDGLGPRY DW G DPLPVDADLL G+VPG
Sbjct: 400  LHEGSVSSIKNKKDSESSKEMNYEHEVDKLLDGLGPRYADWPGADPLPVDADLLSGIVPG 459

Query: 606  YKPPFRVLPYGVRPHLGVKDQTALRRLARVLPPHFALGRSRQHQGLAAAIVKLWEKSLIA 785
            YKPPFR+LPYGVRP LG K+ TALRRLARVLPPHFALGRS+ H GLA A+VKLWE+S IA
Sbjct: 460  YKPPFRLLPYGVRPALGTKEATALRRLARVLPPHFALGRSKHHLGLATAMVKLWERSSIA 519

Query: 786  KVALKRGVQLTSSERMAEEIKRLTGGSLLCRNKEYIVFYRGKDFLAPEVANXXXXXXXXX 965
            K+ALKRGVQLTSSERMA +IK+LTGG+LL RNK+YIVFYRGKDFL+P++A          
Sbjct: 520  KIALKRGVQLTSSERMAVDIKKLTGGTLLSRNKDYIVFYRGKDFLSPDLAEALMERERLA 579

Query: 966  XXXXXXXXXXXXXXSSSISLNLGTFEDAGTTGTLKETLEANARWGKQLSENAKDELVKAA 1145
                          SS +  N+   E++G+ GTL ETLEA+ARWGK+L ++ ++++++AA
Sbjct: 580  KTLQDDEEQARLHASSCVVSNIEAIEESGSAGTLGETLEADARWGKRLDDDHRNKMMRAA 639

Query: 1146 ELERHGVLVRKLERQLSMAERKMMKAEKGLAQVEEFLKPSETGSVHESITDEERYMFRKL 1325
            E+ RH  LV+KLER+L +AE K+MKAEK L +VEEFLKP E  +  ESITDEER+MF+KL
Sbjct: 640  EVARHAQLVKKLERKLFLAEHKLMKAEKALGKVEEFLKPMEPRTDPESITDEERFMFQKL 699

Query: 1326 GLKMKAYLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVKNVALALEAESGGIL 1505
            GL+MKA+LLLGRRG+F GTVENMHLHWKYRELVKIIVKAK  A+VK++AL+LEAESGG+L
Sbjct: 700  GLRMKAFLLLGRRGIFGGTVENMHLHWKYRELVKIIVKAKNVAEVKSMALSLEAESGGVL 759

Query: 1506 VSVDKISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKALARSIELQRREALQHHISNLQTK 1685
            VSVDKISKGFAIIV+RGKDY RP SLRPKNLLTKRKALARSIELQRR+A+  H+S+LQ +
Sbjct: 760  VSVDKISKGFAIIVYRGKDYHRPPSLRPKNLLTKRKALARSIELQRRKAIHRHMSHLQNR 819

Query: 1686 VERLRKELDQMETVKKHGNEELYAKLDVAY 1775
            V++L+ EL QME VK  G+E+LY+KLD +Y
Sbjct: 820  VKQLKSELGQMEVVKDRGDEDLYSKLDASY 849


>XP_008802838.1 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Phoenix dactylifera]
          Length = 895

 Score =  733 bits (1893), Expect = 0.0
 Identities = 383/597 (64%), Positives = 453/597 (75%), Gaps = 9/597 (1%)
 Frame = +3

Query: 12   RKKRSKXXXXXXXXXXXXXXXXXXXAIRTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRL 191
            RK+RSK                   A+R KS+TKI GAGVTK+IVD IHE+W+T EVVRL
Sbjct: 206  RKRRSKTSLAELTLPEGELRRLRHMAVRIKSKTKIKGAGVTKDIVDLIHEQWKTTEVVRL 265

Query: 192  KCEGPPALNMKRMHEILERKTGGLVIWRSGSSISLYRGVTYVNSEMERHRWNTERSKAGS 371
            KCEG PALNMKR HEILERKTGGLVIWRSG+SISLYRGV Y   + E+ ++   +S   S
Sbjct: 266  KCEGAPALNMKRTHEILERKTGGLVIWRSGTSISLYRGVGYEIPQPEKKQY---QSVQRS 322

Query: 372  SNNTHNDKLLQISTAGLETRKGNASHEM---------TPRAIEPLKEVNYESEVDKLLDG 524
            + +T N      +   +E  +GN   ++           +  EP  E+ YE E+DKLLDG
Sbjct: 323  AVDTFNKDTYYPTGVSIENGRGNNIQDLHEDLTASLEKKKDTEPDAEIKYEHEIDKLLDG 382

Query: 525  LGPRYTDWSGFDPLPVDADLLPGVVPGYKPPFRVLPYGVRPHLGVKDQTALRRLARVLPP 704
            LGPRYTDW G  PLPVDADLLPGV+PGYKPPFR+LPYGVR  LG+K+ TALRRLAR+LPP
Sbjct: 383  LGPRYTDWPGSGPLPVDADLLPGVIPGYKPPFRILPYGVRRTLGLKEGTALRRLARLLPP 442

Query: 705  HFALGRSRQHQGLAAAIVKLWEKSLIAKVALKRGVQLTSSERMAEEIKRLTGGSLLCRNK 884
            HFALGRSRQHQGLAAA+VKLWEKS IAK+ALKRGVQLT+SERMAEEIK+LTGG++L  NK
Sbjct: 443  HFALGRSRQHQGLAAAMVKLWEKSSIAKIALKRGVQLTTSERMAEEIKKLTGGTILSSNK 502

Query: 885  EYIVFYRGKDFLAPEVANXXXXXXXXXXXXXXXXXXXXXXXSSSISLNLGTFEDAGTTGT 1064
            +Y+VFYRGKDFLAPEV                         SSS+  N    ++ GT GT
Sbjct: 503  DYLVFYRGKDFLAPEVTEALLERETLAKTLQDEEEQARLRASSSVVSNFEIADEPGTAGT 562

Query: 1065 LKETLEANARWGKQLSENAKDELVKAAELERHGVLVRKLERQLSMAERKMMKAEKGLAQV 1244
            L ETLEA+ARWG +L E+  +++++AAE+ RH  LVRKLER+LS+AER++MKAEK LA+V
Sbjct: 563  LGETLEADARWGNRLDEDHMEKMMRAAEMARHADLVRKLERRLSLAERRLMKAEKALAKV 622

Query: 1245 EEFLKPSETGSVHESITDEERYMFRKLGLKMKAYLLLGRRGVFDGTVENMHLHWKYRELV 1424
            EE LKP+E     ESIT+EER+MFRKLGL+MKA+LLLGRRGVF GTVENMHLHWKYRELV
Sbjct: 623  EESLKPAEHTVDPESITEEERFMFRKLGLRMKAFLLLGRRGVFAGTVENMHLHWKYRELV 682

Query: 1425 KIIVKAKTFAQVKNVALALEAESGGILVSVDKISKGFAIIVFRGKDYRRPTSLRPKNLLT 1604
            K+IVK KTF Q K +AL+LE+ESGG+LVSVDK+SKGFAIIV+RGKDY RP++LRPKNLLT
Sbjct: 683  KVIVKTKTFEQAKYIALSLESESGGVLVSVDKVSKGFAIIVYRGKDYERPSTLRPKNLLT 742

Query: 1605 KRKALARSIELQRREALQHHISNLQTKVERLRKELDQMETVKKHGNEELYAKLDVAY 1775
            KRKALARSIELQR EAL  HISNLQ +VE+LR EL QM+ VK  G+EELY KLD AY
Sbjct: 743  KRKALARSIELQRHEALSRHISNLQKRVEQLRSELVQMDNVKDQGDEELYTKLDSAY 799


>OAY80896.1 Chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Ananas comosus]
          Length = 802

 Score =  724 bits (1868), Expect = 0.0
 Identities = 382/593 (64%), Positives = 450/593 (75%), Gaps = 5/593 (0%)
 Frame = +3

Query: 12   RKKRSKXXXXXXXXXXXXXXXXXXXAIRTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRL 191
            R KRSK                   AIR KS+TKIGGAGVT+EIVD IHEKW T EVVRL
Sbjct: 189  RTKRSKASLAELTLPEGELRRLRHLAIRMKSKTKIGGAGVTQEIVDLIHEKWNTSEVVRL 248

Query: 192  KCEGPPALNMKRMHEILERKTGGLVIWRSGSSISLYRGVTY-VNSEMERHRWNTERSKAG 368
            KCEGPPALNMKRMHEILERKTGGLVIWRSG+SISLYRGV Y V    +    N + + A 
Sbjct: 249  KCEGPPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVAYEVPQPAKTPYHNAQGTGAN 308

Query: 369  SSNNT-HNDKLLQISTAGLETRKGN---ASHEMTPRAIEPLKEVNYESEVDKLLDGLGPR 536
            S N T +   L+        TR  N   ++     R  +   E+ YESE+DKLLD LGPR
Sbjct: 309  SLNRTAYKPSLVPAELDRPSTRDSNRHLSTAIQKERGKQSPPEIKYESEIDKLLDELGPR 368

Query: 537  YTDWSGFDPLPVDADLLPGVVPGYKPPFRVLPYGVRPHLGVKDQTALRRLARVLPPHFAL 716
            YTDW G DPLPVDADLLPG+VPGYKPPFR+LPYGV+P +G KD TALRRLAR LPPHFAL
Sbjct: 369  YTDWPGCDPLPVDADLLPGIVPGYKPPFRILPYGVKPSIGQKDGTALRRLARTLPPHFAL 428

Query: 717  GRSRQHQGLAAAIVKLWEKSLIAKVALKRGVQLTSSERMAEEIKRLTGGSLLCRNKEYIV 896
            GR+RQH+GLA A+VKLWEKS IAK+ALKRGVQLTSSERMA +IK+LTGG++L RNK++IV
Sbjct: 429  GRNRQHEGLATAMVKLWEKSSIAKIALKRGVQLTSSERMAADIKKLTGGTILSRNKDFIV 488

Query: 897  FYRGKDFLAPEVANXXXXXXXXXXXXXXXXXXXXXXXSSSISLNLGTFEDAGTTGTLKET 1076
            FYRGKDFL+ EVA                        +SS+  ++ T  + G  GTLKET
Sbjct: 489  FYRGKDFLSREVAEALLERERLAKALQDEEEQARLRAASSVCSDIETVGEPGAAGTLKET 548

Query: 1077 LEANARWGKQLSENAKDELVKAAELERHGVLVRKLERQLSMAERKMMKAEKGLAQVEEFL 1256
            LEA+A++G +L ++  +++ +AAE+ RH  LVRKLE +LS+A+RK+MKAEK LA+VEE L
Sbjct: 549  LEADAKYGSKLDDDHVNKMRRAAEMARHAELVRKLEWKLSLAQRKIMKAEKALAKVEESL 608

Query: 1257 KPSETGSVHESITDEERYMFRKLGLKMKAYLLLGRRGVFDGTVENMHLHWKYRELVKIIV 1436
            KP       E+ITDEER+MFRKLGL+MKA+LLLGRRGVFDGTVENMHLHWKYRELVK+IV
Sbjct: 609  KPVGPTKDPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIV 668

Query: 1437 KAKTFAQVKNVALALEAESGGILVSVDKISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKA 1616
            KAKTFA VKN+AL+LEAESGGILVSVDKISKGFAIIV+RGK+Y+RP SLRPKNLLTKRKA
Sbjct: 669  KAKTFALVKNIALSLEAESGGILVSVDKISKGFAIIVYRGKEYQRPPSLRPKNLLTKRKA 728

Query: 1617 LARSIELQRREALQHHISNLQTKVERLRKELDQMETVKKHGNEELYAKLDVAY 1775
            LARSIELQRREAL  HI NL  +V++L+ EL QME V++ G++ELY +LD AY
Sbjct: 729  LARSIELQRREALNKHIKNLNKRVDQLKSELVQMEDVREQGDDELYDRLDTAY 781


>XP_010278136.1 PREDICTED: CRM-domain containing factor CFM3A,
            chloroplastic/mitochondrial isoform X3 [Nelumbo nucifera]
          Length = 880

 Score =  724 bits (1870), Expect = 0.0
 Identities = 374/579 (64%), Positives = 452/579 (78%), Gaps = 14/579 (2%)
 Frame = +3

Query: 87   AIRTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRLKCEGPPALNMKRMHEILERKTGGLV 266
            A+RTK +TKI GAGVT+ +VD IHEKW+T E+VRLKCEG  ALNMKRMHEILERKTGGLV
Sbjct: 256  AVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEGASALNMKRMHEILERKTGGLV 315

Query: 267  IWRSGSSISLYRGVTYVNSEMERHRWNTERSKAGSSNNTHNDKLLQISTAGLETR-KGNA 443
            IWRSG+SISLYRGV+Y  + ++  R   +      + N+HN    +I TA +    K N+
Sbjct: 316  IWRSGTSISLYRGVSYEVASVKDARKRIQNI----NENSHNS--FEIITAKINRDPKENS 369

Query: 444  SHEMTP-------------RAIEPLKEVNYESEVDKLLDGLGPRYTDWSGFDPLPVDADL 584
            S+                 + +E L E+ YE E+D+LLD LGPRYTDW G  PLPVDADL
Sbjct: 370  SYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRYTDWPGNGPLPVDADL 429

Query: 585  LPGVVPGYKPPFRVLPYGVRPHLGVKDQTALRRLARVLPPHFALGRSRQHQGLAAAIVKL 764
            LPGVV  YKPPFR+LPYGVR  LG+K+ TALRRLAR++PPHFALGRSRQHQGLA A++KL
Sbjct: 430  LPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALGRSRQHQGLAMAMIKL 489

Query: 765  WEKSLIAKVALKRGVQLTSSERMAEEIKRLTGGSLLCRNKEYIVFYRGKDFLAPEVANXX 944
            WE+S IAK+ALKRGVQLT+SERMAE+IK+LTG ++L RNK++IVFYRGK+FL+P+V    
Sbjct: 490  WERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVFYRGKNFLSPDVTEAL 549

Query: 945  XXXXXXXXXXXXXXXXXXXXXSSSISLNLGTFEDAGTTGTLKETLEANARWGKQLSENAK 1124
                                 SS +     T  ++GT GTL+ETLEA+ARWGK+L +  +
Sbjct: 550  LERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETLEADARWGKKLDDEDR 609

Query: 1125 DELVKAAELERHGVLVRKLERQLSMAERKMMKAEKGLAQVEEFLKPSETGSVHESITDEE 1304
             ++++AAE+ RHG LVRKLE++L++AERK+MKAE+ L++VEEFLKP+E  +  ESITDEE
Sbjct: 610  KKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLKPTERPADPESITDEE 669

Query: 1305 RYMFRKLGLKMKAYLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVKNVALALE 1484
            R+MFRKLGL+MKA+LLLGRRGVFDGTVENMHLHWKYRELVKI+VKAKTF QV+N+ALALE
Sbjct: 670  RFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKTFDQVRNIALALE 729

Query: 1485 AESGGILVSVDKISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKALARSIELQRREALQHH 1664
            AESGGILVSVD++SKGFAIIVFRGKDY+RP +LRPKNLLTKRKALARSIELQR EAL  H
Sbjct: 730  AESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKALARSIELQRHEALYKH 789

Query: 1665 ISNLQTKVERLRKELDQMETVKKHGNEELYAKLDVAYPS 1781
            IS L  +VE LR ELDQME VK  G+EELYAKLD AYP+
Sbjct: 790  ISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPT 828


>XP_010278134.1 PREDICTED: CRM-domain containing factor CFM3A,
            chloroplastic/mitochondrial isoform X2 [Nelumbo nucifera]
          Length = 896

 Score =  724 bits (1870), Expect = 0.0
 Identities = 374/579 (64%), Positives = 452/579 (78%), Gaps = 14/579 (2%)
 Frame = +3

Query: 87   AIRTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRLKCEGPPALNMKRMHEILERKTGGLV 266
            A+RTK +TKI GAGVT+ +VD IHEKW+T E+VRLKCEG  ALNMKRMHEILERKTGGLV
Sbjct: 256  AVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEGASALNMKRMHEILERKTGGLV 315

Query: 267  IWRSGSSISLYRGVTYVNSEMERHRWNTERSKAGSSNNTHNDKLLQISTAGLETR-KGNA 443
            IWRSG+SISLYRGV+Y  + ++  R   +      + N+HN    +I TA +    K N+
Sbjct: 316  IWRSGTSISLYRGVSYEVASVKDARKRIQNI----NENSHNS--FEIITAKINRDPKENS 369

Query: 444  SHEMTP-------------RAIEPLKEVNYESEVDKLLDGLGPRYTDWSGFDPLPVDADL 584
            S+                 + +E L E+ YE E+D+LLD LGPRYTDW G  PLPVDADL
Sbjct: 370  SYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRYTDWPGNGPLPVDADL 429

Query: 585  LPGVVPGYKPPFRVLPYGVRPHLGVKDQTALRRLARVLPPHFALGRSRQHQGLAAAIVKL 764
            LPGVV  YKPPFR+LPYGVR  LG+K+ TALRRLAR++PPHFALGRSRQHQGLA A++KL
Sbjct: 430  LPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALGRSRQHQGLAMAMIKL 489

Query: 765  WEKSLIAKVALKRGVQLTSSERMAEEIKRLTGGSLLCRNKEYIVFYRGKDFLAPEVANXX 944
            WE+S IAK+ALKRGVQLT+SERMAE+IK+LTG ++L RNK++IVFYRGK+FL+P+V    
Sbjct: 490  WERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVFYRGKNFLSPDVTEAL 549

Query: 945  XXXXXXXXXXXXXXXXXXXXXSSSISLNLGTFEDAGTTGTLKETLEANARWGKQLSENAK 1124
                                 SS +     T  ++GT GTL+ETLEA+ARWGK+L +  +
Sbjct: 550  LERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETLEADARWGKKLDDEDR 609

Query: 1125 DELVKAAELERHGVLVRKLERQLSMAERKMMKAEKGLAQVEEFLKPSETGSVHESITDEE 1304
             ++++AAE+ RHG LVRKLE++L++AERK+MKAE+ L++VEEFLKP+E  +  ESITDEE
Sbjct: 610  KKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLKPTERPADPESITDEE 669

Query: 1305 RYMFRKLGLKMKAYLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVKNVALALE 1484
            R+MFRKLGL+MKA+LLLGRRGVFDGTVENMHLHWKYRELVKI+VKAKTF QV+N+ALALE
Sbjct: 670  RFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKTFDQVRNIALALE 729

Query: 1485 AESGGILVSVDKISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKALARSIELQRREALQHH 1664
            AESGGILVSVD++SKGFAIIVFRGKDY+RP +LRPKNLLTKRKALARSIELQR EAL  H
Sbjct: 730  AESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKALARSIELQRHEALYKH 789

Query: 1665 ISNLQTKVERLRKELDQMETVKKHGNEELYAKLDVAYPS 1781
            IS L  +VE LR ELDQME VK  G+EELYAKLD AYP+
Sbjct: 790  ISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPT 828


>XP_010278131.1 PREDICTED: CRM-domain containing factor CFM3A,
            chloroplastic/mitochondrial isoform X1 [Nelumbo nucifera]
            XP_010278132.1 PREDICTED: CRM-domain containing factor
            CFM3A, chloroplastic/mitochondrial isoform X1 [Nelumbo
            nucifera] XP_010278133.1 PREDICTED: CRM-domain containing
            factor CFM3A, chloroplastic/mitochondrial isoform X1
            [Nelumbo nucifera] XP_019055829.1 PREDICTED: CRM-domain
            containing factor CFM3A, chloroplastic/mitochondrial
            isoform X1 [Nelumbo nucifera]
          Length = 914

 Score =  724 bits (1870), Expect = 0.0
 Identities = 374/579 (64%), Positives = 452/579 (78%), Gaps = 14/579 (2%)
 Frame = +3

Query: 87   AIRTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRLKCEGPPALNMKRMHEILERKTGGLV 266
            A+RTK +TKI GAGVT+ +VD IHEKW+T E+VRLKCEG  ALNMKRMHEILERKTGGLV
Sbjct: 256  AVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCEGASALNMKRMHEILERKTGGLV 315

Query: 267  IWRSGSSISLYRGVTYVNSEMERHRWNTERSKAGSSNNTHNDKLLQISTAGLETR-KGNA 443
            IWRSG+SISLYRGV+Y  + ++  R   +      + N+HN    +I TA +    K N+
Sbjct: 316  IWRSGTSISLYRGVSYEVASVKDARKRIQNI----NENSHNS--FEIITAKINRDPKENS 369

Query: 444  SHEMTP-------------RAIEPLKEVNYESEVDKLLDGLGPRYTDWSGFDPLPVDADL 584
            S+                 + +E L E+ YE E+D+LLD LGPRYTDW G  PLPVDADL
Sbjct: 370  SYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPRYTDWPGNGPLPVDADL 429

Query: 585  LPGVVPGYKPPFRVLPYGVRPHLGVKDQTALRRLARVLPPHFALGRSRQHQGLAAAIVKL 764
            LPGVV  YKPPFR+LPYGVR  LG+K+ TALRRLAR++PPHFALGRSRQHQGLA A++KL
Sbjct: 430  LPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFALGRSRQHQGLAMAMIKL 489

Query: 765  WEKSLIAKVALKRGVQLTSSERMAEEIKRLTGGSLLCRNKEYIVFYRGKDFLAPEVANXX 944
            WE+S IAK+ALKRGVQLT+SERMAE+IK+LTG ++L RNK++IVFYRGK+FL+P+V    
Sbjct: 490  WERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIVFYRGKNFLSPDVTEAL 549

Query: 945  XXXXXXXXXXXXXXXXXXXXXSSSISLNLGTFEDAGTTGTLKETLEANARWGKQLSENAK 1124
                                 SS +     T  ++GT GTL+ETLEA+ARWGK+L +  +
Sbjct: 550  LERERLAKALQDEEEQARLRASSMVISVSETIVESGTAGTLEETLEADARWGKKLDDEDR 609

Query: 1125 DELVKAAELERHGVLVRKLERQLSMAERKMMKAEKGLAQVEEFLKPSETGSVHESITDEE 1304
             ++++AAE+ RHG LVRKLE++L++AERK+MKAE+ L++VEEFLKP+E  +  ESITDEE
Sbjct: 610  KKMMRAAEVARHGTLVRKLEQKLALAERKLMKAERALSKVEEFLKPTERPADPESITDEE 669

Query: 1305 RYMFRKLGLKMKAYLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVKNVALALE 1484
            R+MFRKLGL+MKA+LLLGRRGVFDGTVENMHLHWKYRELVKI+VKAKTF QV+N+ALALE
Sbjct: 670  RFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKTFDQVRNIALALE 729

Query: 1485 AESGGILVSVDKISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKALARSIELQRREALQHH 1664
            AESGGILVSVD++SKGFAIIVFRGKDY+RP +LRPKNLLTKRKALARSIELQR EAL  H
Sbjct: 730  AESGGILVSVDRVSKGFAIIVFRGKDYKRPPTLRPKNLLTKRKALARSIELQRHEALYKH 789

Query: 1665 ISNLQTKVERLRKELDQMETVKKHGNEELYAKLDVAYPS 1781
            IS L  +VE LR ELDQME VK  G+EELYAKLD AYP+
Sbjct: 790  ISTLNKRVEMLRSELDQMEIVKDQGDEELYAKLDAAYPT 828


>XP_020104237.1 CRM-domain containing factor CFM3, chloroplastic/mitochondrial
            [Ananas comosus]
          Length = 903

 Score =  723 bits (1866), Expect = 0.0
 Identities = 382/593 (64%), Positives = 450/593 (75%), Gaps = 5/593 (0%)
 Frame = +3

Query: 12   RKKRSKXXXXXXXXXXXXXXXXXXXAIRTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRL 191
            R KRSK                   AIR KS+TKIGGAGVT+EIVD IHEKW T EVVRL
Sbjct: 189  RTKRSKTSLAELTLPEGELRRLRHLAIRMKSKTKIGGAGVTQEIVDLIHEKWNTSEVVRL 248

Query: 192  KCEGPPALNMKRMHEILERKTGGLVIWRSGSSISLYRGVTY-VNSEMERHRWNTERSKAG 368
            KCEGPPALNMKRMHEILERKTGGLVIWRSG+SISLYRGV Y V    +    N + + A 
Sbjct: 249  KCEGPPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVAYEVPQPAKTPYHNGQGTGAN 308

Query: 369  SSNNT-HNDKLLQISTAGLETRKGN---ASHEMTPRAIEPLKEVNYESEVDKLLDGLGPR 536
            S N T +   L+        TR  N   ++     R  +   E+ YESE+DKLLD LGPR
Sbjct: 309  SLNRTAYKPSLVPAELDRPSTRDSNRHLSTAIQKERGKQSPPEIKYESEIDKLLDELGPR 368

Query: 537  YTDWSGFDPLPVDADLLPGVVPGYKPPFRVLPYGVRPHLGVKDQTALRRLARVLPPHFAL 716
            YTDW G DPLPVDADLLPG+VPGYKPPFR+LPYGV+P +G KD TALRRLAR LPPHFAL
Sbjct: 369  YTDWPGCDPLPVDADLLPGIVPGYKPPFRILPYGVKPSIGQKDGTALRRLARTLPPHFAL 428

Query: 717  GRSRQHQGLAAAIVKLWEKSLIAKVALKRGVQLTSSERMAEEIKRLTGGSLLCRNKEYIV 896
            GR+RQH+GLA A+VKLWEKS IAK+ALKRGVQLTSSERMA +IK+LTGG++L RNK++IV
Sbjct: 429  GRNRQHEGLATAMVKLWEKSSIAKIALKRGVQLTSSERMAADIKKLTGGTILSRNKDFIV 488

Query: 897  FYRGKDFLAPEVANXXXXXXXXXXXXXXXXXXXXXXXSSSISLNLGTFEDAGTTGTLKET 1076
            FYRGKDFL+ EVA                        +SS+  ++ T  + G  GTLKET
Sbjct: 489  FYRGKDFLSREVAEALLERERLAKALQDEEEQARLRAASSVCSDIETVGEPGAAGTLKET 548

Query: 1077 LEANARWGKQLSENAKDELVKAAELERHGVLVRKLERQLSMAERKMMKAEKGLAQVEEFL 1256
            LEA+A++G +L ++  +++ +AAE+ RH  LVRKLE +LS+A+RK+MKAEK LA+VEE L
Sbjct: 549  LEADAKYGSKLDDDHVNKMRRAAEMARHAELVRKLEWKLSLAQRKIMKAEKALAKVEESL 608

Query: 1257 KPSETGSVHESITDEERYMFRKLGLKMKAYLLLGRRGVFDGTVENMHLHWKYRELVKIIV 1436
            KP       E+ITDEER+MFRKLGL+MKA+LLLGRRGVFDGTVENMHLHWKYRELVK+IV
Sbjct: 609  KPVGPTKDPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIV 668

Query: 1437 KAKTFAQVKNVALALEAESGGILVSVDKISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKA 1616
            KAKTFA VKN+AL+LEAESGGILVSVDKISKGFAIIV+RGK+Y+RP SLRPKNLLTKRKA
Sbjct: 669  KAKTFALVKNIALSLEAESGGILVSVDKISKGFAIIVYRGKEYQRPPSLRPKNLLTKRKA 728

Query: 1617 LARSIELQRREALQHHISNLQTKVERLRKELDQMETVKKHGNEELYAKLDVAY 1775
            LARSIELQRREAL  HI NL  +V++L+ EL QME V++ G++ELY +LD AY
Sbjct: 729  LARSIELQRREALNKHIKNLNKRVDQLKSELVQMEDVREQGDDELYDRLDTAY 781


>XP_015887836.1 PREDICTED: CRM-domain containing factor CFM3A,
            chloroplastic/mitochondrial [Ziziphus jujuba]
          Length = 913

 Score =  707 bits (1824), Expect = 0.0
 Identities = 359/567 (63%), Positives = 446/567 (78%), Gaps = 6/567 (1%)
 Frame = +3

Query: 99   KSRTKIGGAGVTKEIVDKIHEKWQTEEVVRLKCEGPPALNMKRMHEILERKTGGLVIWRS 278
            K +T+IGGAGVT+E+V+ IHE+W+T E+VRLK +GPPALNMKRMHEILERKTGGLV+WRS
Sbjct: 261  KHKTRIGGAGVTREVVEMIHERWKTSEIVRLKIDGPPALNMKRMHEILERKTGGLVVWRS 320

Query: 279  GSSISLYRGVTYVNSEMERHRWNTERSKAGSSNNTHNDKLLQISTAGLETR------KGN 440
            G+S+SLYRGV+Y    ++ ++   ++ +  S+  T +DK +   +     R      K +
Sbjct: 321  GTSLSLYRGVSYEVPSVQLNKRTYDKDEVSSTLPTVSDKPMGDPSRYASDRNVDMSLKKS 380

Query: 441  ASHEMTPRAIEPLKEVNYESEVDKLLDGLGPRYTDWSGFDPLPVDADLLPGVVPGYKPPF 620
             S  +  +  E + EV YE EVDKLLDGLGPRY DW G DPLPVDADLLPG+VPGY+PPF
Sbjct: 381  ESTSLEKKDTEYVPEVKYEDEVDKLLDGLGPRYEDWPGCDPLPVDADLLPGIVPGYQPPF 440

Query: 621  RVLPYGVRPHLGVKDQTALRRLARVLPPHFALGRSRQHQGLAAAIVKLWEKSLIAKVALK 800
            RVLPYGVRP LG+++ T+LRRLARVLPPHFALGRSRQ QGLAAA++KLWEKS IAK+ALK
Sbjct: 441  RVLPYGVRPSLGLREATSLRRLARVLPPHFALGRSRQLQGLAAAMIKLWEKSSIAKIALK 500

Query: 801  RGVQLTSSERMAEEIKRLTGGSLLCRNKEYIVFYRGKDFLAPEVANXXXXXXXXXXXXXX 980
            RGVQLT+SERMAE+IKRLTGG LL RNK+++VFYRGK+FL+PEV                
Sbjct: 501  RGVQLTTSERMAEDIKRLTGGVLLSRNKDFLVFYRGKNFLSPEVTEALLERERLAKSLQD 560

Query: 981  XXXXXXXXXSSSISLNLGTFEDAGTTGTLKETLEANARWGKQLSENAKDELVKAAELERH 1160
                     S+ +   +   + +   GTL ETL+ANA+WGK+L +  K  +++ AE+ RH
Sbjct: 561  EEEQARLRASAMVIPQIDEPDRSRIAGTLGETLDANAKWGKKLDDQHKKNVMQEAEIIRH 620

Query: 1161 GVLVRKLERQLSMAERKMMKAEKGLAQVEEFLKPSETGSVHESITDEERYMFRKLGLKMK 1340
              LV KLER+L+ AERK+M+AEK L++VEEFLKP+ T +  ESITDEER+MFRKLGL+MK
Sbjct: 621  ANLVAKLERKLAFAERKLMRAEKALSKVEEFLKPAHTQADPESITDEERFMFRKLGLRMK 680

Query: 1341 AYLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVKNVALALEAESGGILVSVDK 1520
            A+LLLGRRGVFDGTVENMHLHWKYRELVKI+V AKTF QVK  ALALEAESGG+LVSVDK
Sbjct: 681  AFLLLGRRGVFDGTVENMHLHWKYRELVKIMVLAKTFEQVKKTALALEAESGGVLVSVDK 740

Query: 1521 ISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKALARSIELQRREALQHHISNLQTKVERLR 1700
            +SK +AII++RGKDY+RP++LRPKNLLTKRKALARSIE+QR+EAL  HIS +Q+KV++LR
Sbjct: 741  VSKRYAIIMYRGKDYQRPSTLRPKNLLTKRKALARSIEIQRQEALLKHISAVQSKVDKLR 800

Query: 1701 KELDQMETVKKHGNEELYAKLDVAYPS 1781
             EL+QM+TVK  G+E LY KLD +YPS
Sbjct: 801  SELEQMDTVKDRGDEALYDKLDSSYPS 827


>OAY55643.1 hypothetical protein MANES_03G169200 [Manihot esculenta]
          Length = 887

 Score =  704 bits (1816), Expect = 0.0
 Identities = 355/572 (62%), Positives = 451/572 (78%), Gaps = 9/572 (1%)
 Frame = +3

Query: 93   RTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRLKCEGPPALNMKRMHEILERKTGGLVIW 272
            +TKS+ ++ GAGVT+E+VD IHE+W+  E+VR+K EG PALNMKRMHEILERKTGGLVIW
Sbjct: 232  QTKSKVRVKGAGVTQEVVDTIHERWKASEIVRVKVEGAPALNMKRMHEILERKTGGLVIW 291

Query: 273  RSGSSISLYRGVTY------VNSEM-ERHRWNTERSKAGSSNNTHN-DKLLQISTAGLET 428
            RSG+S+SLYRGV+Y      VN  + +R+   T+     +S    +  K+   S   +  
Sbjct: 292  RSGTSVSLYRGVSYEVPSVQVNQRIVKRNEIPTDSLPTTASKIIRSPSKVASSSELDMPQ 351

Query: 429  RKGNASHEMTPRAIEPLKE-VNYESEVDKLLDGLGPRYTDWSGFDPLPVDADLLPGVVPG 605
             + +A+ E   +    ++E V YE EV+ LL+GLGPRYTDW+G DPLPVDADLLPG VPG
Sbjct: 352  SRSDATAEGGEKKETRMQEEVKYEDEVNNLLEGLGPRYTDWAGLDPLPVDADLLPGTVPG 411

Query: 606  YKPPFRVLPYGVRPHLGVKDQTALRRLARVLPPHFALGRSRQHQGLAAAIVKLWEKSLIA 785
            Y+PPFR+LPYGVR  LG K+ T+LRR+ARVLPPHFALGRSRQ QGLA A++KLWEKS IA
Sbjct: 412  YQPPFRILPYGVRSTLGQKEATSLRRIARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIA 471

Query: 786  KVALKRGVQLTSSERMAEEIKRLTGGSLLCRNKEYIVFYRGKDFLAPEVANXXXXXXXXX 965
            K+ALKRGVQLT+SERMAE+IK+LTGG LL RNK+++VFYRGKDFL+P+V+          
Sbjct: 472  KIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPDVSEALLERERLA 531

Query: 966  XXXXXXXXXXXXXXSSSISLNLGTFEDAGTTGTLKETLEANARWGKQLSENAKDELVKAA 1145
                          S+ +  + GT E +GT GTL+ETL+A+A+WGK L +N ++++++  
Sbjct: 532  KSLQDKEEQARLRASALVIQSAGTIEQSGTAGTLEETLDADAKWGKSLDDNHREKIMREI 591

Query: 1146 ELERHGVLVRKLERQLSMAERKMMKAEKGLAQVEEFLKPSETGSVHESITDEERYMFRKL 1325
            E+ERH  LVRKLE +L+ AERK+MKAE+ L++VEEFLKP+E  +  +SITDEER+MFRKL
Sbjct: 592  EIERHAKLVRKLESKLAFAERKLMKAERALSKVEEFLKPAERQASPDSITDEERFMFRKL 651

Query: 1326 GLKMKAYLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVKNVALALEAESGGIL 1505
            GL+MKA+LLLGRRGVFDGTVENMHLHWKYRELVKII+KAK   QVK +ALALEAESGG+L
Sbjct: 652  GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKNIEQVKKIALALEAESGGVL 711

Query: 1506 VSVDKISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKALARSIELQRREALQHHISNLQTK 1685
            VSVDKISKG+AIIVFRGK+Y+RP++LRPKNLLTKRKALARS+E+QRREAL +HIS LQ K
Sbjct: 712  VSVDKISKGYAIIVFRGKNYQRPSTLRPKNLLTKRKALARSVEMQRREALMNHISALQMK 771

Query: 1686 VERLRKELDQMETVKKHGNEELYAKLDVAYPS 1781
            V+++R E++QM +VK  G+EELY +LD +YP+
Sbjct: 772  VDKIRSEIEQMASVKDQGDEELYERLDASYPT 803


>XP_011091130.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Sesamum indicum]
          Length = 886

 Score =  703 bits (1815), Expect = 0.0
 Identities = 360/569 (63%), Positives = 448/569 (78%), Gaps = 6/569 (1%)
 Frame = +3

Query: 87   AIRTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRLKCEGPPALNMKRMHEILERKTGGLV 266
            A+R K++T+IGGAGVT+++V+ I EKW+T EVVRLK EGPPALNM+RMHEILERKTGGLV
Sbjct: 260  ALRIKNKTRIGGAGVTQQVVETIREKWKTSEVVRLKIEGPPALNMRRMHEILERKTGGLV 319

Query: 267  IWRSGSSISLYRGVTYVNSEMERHRWNTERSKAGSSNNTHNDKLLQISTAG--LETRKGN 440
            IWRSG+S++LYRGVTY +S  +  +    R++    +++  DK  Q S+    L  R+  
Sbjct: 320  IWRSGTSLALYRGVTYEDSATKLKKRIFRRNELPHKSHSATDKTGQDSSESGVLPDREVP 379

Query: 441  ASHEMT----PRAIEPLKEVNYESEVDKLLDGLGPRYTDWSGFDPLPVDADLLPGVVPGY 608
            +   ++     R  E   EV YE EVDKLLD LGPRYTDW G DPLPVDADLLPG VPGY
Sbjct: 380  SPESVSLNPDDRDPETSSEVRYEDEVDKLLDSLGPRYTDWPGDDPLPVDADLLPGTVPGY 439

Query: 609  KPPFRVLPYGVRPHLGVKDQTALRRLARVLPPHFALGRSRQHQGLAAAIVKLWEKSLIAK 788
            +PPFR+LPYGVR  LG+K+ TALRRLARVLPPHFALGRSRQHQGLAAA++KLWE+S IAK
Sbjct: 440  RPPFRLLPYGVRSTLGMKEATALRRLARVLPPHFALGRSRQHQGLAAAMIKLWERSSIAK 499

Query: 789  VALKRGVQLTSSERMAEEIKRLTGGSLLCRNKEYIVFYRGKDFLAPEVANXXXXXXXXXX 968
            +ALKRGVQLT+SERMAE++KRLTGG LL RNK+++V+YRGKDFL+P+VA           
Sbjct: 500  IALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVYYRGKDFLSPDVAEALLEKERLAK 559

Query: 969  XXXXXXXXXXXXXSSSISLNLGTFEDAGTTGTLKETLEANARWGKQLSENAKDELVKAAE 1148
                          + I+  +   +++GT GTLKETL+A+ RWGK+L +  K+++++ AE
Sbjct: 560  ALQDEEEQARLRALALIAPAVEETDESGTAGTLKETLDADTRWGKRLDDVHKEKVMREAE 619

Query: 1149 LERHGVLVRKLERQLSMAERKMMKAEKGLAQVEEFLKPSETGSVHESITDEERYMFRKLG 1328
            + RH  LVRKLE +L+ AERK+ KAE+ L++VEE L P++     ES+TDEER+MFRKLG
Sbjct: 620  VLRHANLVRKLENKLAFAERKLSKAERALSKVEESLYPADRAQDPESLTDEERFMFRKLG 679

Query: 1329 LKMKAYLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVKNVALALEAESGGILV 1508
            L+MKA+LLLGRRGVF GTVENMHLHWKYRELVKIIVKA+   +VKN+ALALEAESGG+LV
Sbjct: 680  LRMKAFLLLGRRGVFGGTVENMHLHWKYRELVKIIVKAQNIEEVKNIALALEAESGGVLV 739

Query: 1509 SVDKISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKALARSIELQRREALQHHISNLQTKV 1688
            SVDK+SKG+AIIVFRG+DY+RP+ LRPKNLLTKRKALARSIELQRREAL +H+S LQT+V
Sbjct: 740  SVDKVSKGYAIIVFRGRDYKRPSLLRPKNLLTKRKALARSIELQRREALLNHMSTLQTRV 799

Query: 1689 ERLRKELDQMETVKKHGNEELYAKLDVAY 1775
             +LR E++QM  VK+ G+EELY KLD AY
Sbjct: 800  NQLRSEIEQMAAVKEQGDEELYNKLDSAY 828


>XP_012473005.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Gossypium raimondii] KJB21904.1
            hypothetical protein B456_004G020400 [Gossypium
            raimondii]
          Length = 853

 Score =  701 bits (1809), Expect = 0.0
 Identities = 360/573 (62%), Positives = 445/573 (77%), Gaps = 10/573 (1%)
 Frame = +3

Query: 93   RTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRLKCEGPPALNMKRMHEILERKTGGLVIW 272
            RTKS+ +I GAGVT+E+VD IHEKW+T E+VRLK EG PALNMKRMHEILERKTGGLVIW
Sbjct: 239  RTKSKMRIKGAGVTQEVVDTIHEKWKTMEIVRLKVEGAPALNMKRMHEILERKTGGLVIW 298

Query: 273  RSGSSISLYRGVTYVNSEMERHRWNTERSKAGSSNNTHNDKLLQIST---AGLETRKGNA 443
            RSG+SISLYRGV+Y    +  ++   +R++     +T++  L+   T   +GL   K  A
Sbjct: 299  RSGTSISLYRGVSYEVPSVHLNKQIYKRNEM----STYSSPLVSDKTEDPSGLVPHKDVA 354

Query: 444  SHEMTPRAI-------EPLKEVNYESEVDKLLDGLGPRYTDWSGFDPLPVDADLLPGVVP 602
              +             EPL E+ YE EVDKLL+GLGPRY DW G DPLPVDADLLPG+VP
Sbjct: 355  PPQSNSETATEEHKNTEPLPEIKYEDEVDKLLEGLGPRYADWPGCDPLPVDADLLPGIVP 414

Query: 603  GYKPPFRVLPYGVRPHLGVKDQTALRRLARVLPPHFALGRSRQHQGLAAAIVKLWEKSLI 782
            GY+PPFRVLPYGVR  LGVK+ T+LRRLARVLPPHFA+GRSRQ QGLA A+ KLWEKS I
Sbjct: 415  GYQPPFRVLPYGVRSSLGVKEATSLRRLARVLPPHFAIGRSRQLQGLAVAMTKLWEKSSI 474

Query: 783  AKVALKRGVQLTSSERMAEEIKRLTGGSLLCRNKEYIVFYRGKDFLAPEVANXXXXXXXX 962
            AK+ALKRGVQLT+SERMAE++K+LTGG LL RNK+++VFYRGK+FL+ +VA         
Sbjct: 475  AKIALKRGVQLTTSERMAEDLKKLTGGILLSRNKDFLVFYRGKNFLSADVAEALLERERL 534

Query: 963  XXXXXXXXXXXXXXXSSSISLNLGTFEDAGTTGTLKETLEANARWGKQLSENAKDELVKA 1142
                           S+  + +    E +G  GTL ETL+A+ARWGK+L ++ K++++K 
Sbjct: 535  AKSLQDVEEQARLRASALFAQSTEVAEQSGAAGTLGETLDADARWGKRLDDHHKEKVLKE 594

Query: 1143 AELERHGVLVRKLERQLSMAERKMMKAEKGLAQVEEFLKPSETGSVHESITDEERYMFRK 1322
            AE+ RH  LVRKLE+ L+ AERK++KAE+ L++VE++LKP++  +  ESITDEER+MFRK
Sbjct: 595  AEILRHANLVRKLEKNLAFAERKLLKAERALSKVEDYLKPADRQADPESITDEERFMFRK 654

Query: 1323 LGLKMKAYLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVKNVALALEAESGGI 1502
            LGL+MKA+LLLGRRGVFDGT+ENMHLHWKYRELVKII+KAK F QVK VA+ALEAESGG+
Sbjct: 655  LGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIMKAKNFDQVKKVAIALEAESGGV 714

Query: 1503 LVSVDKISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKALARSIELQRREALQHHISNLQT 1682
            LVSVDKISKG+AIIV+RGKDY RP+++RPKNLLTKR+ALARSIELQRREAL  HIS LQ 
Sbjct: 715  LVSVDKISKGYAIIVYRGKDYERPSTIRPKNLLTKRRALARSIELQRREALVKHISALQA 774

Query: 1683 KVERLRKELDQMETVKKHGNEELYAKLDVAYPS 1781
            KVE+LR E+DQM ++   G+EE Y +LD +YPS
Sbjct: 775  KVEKLRSEIDQMHSMDARGDEEFYDRLDSSYPS 807


>XP_002280226.1 PREDICTED: CRM-domain containing factor CFM3A,
            chloroplastic/mitochondrial [Vitis vinifera] CBI26364.3
            unnamed protein product, partial [Vitis vinifera]
          Length = 902

 Score =  702 bits (1813), Expect = 0.0
 Identities = 362/574 (63%), Positives = 442/574 (77%), Gaps = 12/574 (2%)
 Frame = +3

Query: 90   IRTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRLKCEGPPALNMKRMHEILERKTGGLVI 269
            +RTK++TKIGG GVT+ +VD I EKW+T E+V+LKCEG  ALNM+R+HEILERKTGGLVI
Sbjct: 233  MRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRRIHEILERKTGGLVI 292

Query: 270  WRSGSSISLYRGVTY---VNSEMERHRWNTERSKAGSSNNTHNDKLLQISTAGLETRKGN 440
            WRSG+S+SLYRGV+Y   V      ++ N     + SS   ++  +    T+G     G+
Sbjct: 293  WRSGTSVSLYRGVSYEVPVQLNKRVYKKNETSHSSFSSITPNSFAISSNKTSGNAPAVGS 352

Query: 441  ASHEMTPRAI---------EPLKEVNYESEVDKLLDGLGPRYTDWSGFDPLPVDADLLPG 593
              +    +A          +   EV YE E+DKLLDGLGPRYTDW G DPLP+DADLLPG
Sbjct: 353  NQNVHASQATLNITDGENKDTESEVKYEDEIDKLLDGLGPRYTDWPGCDPLPIDADLLPG 412

Query: 594  VVPGYKPPFRVLPYGVRPHLGVKDQTALRRLARVLPPHFALGRSRQHQGLAAAIVKLWEK 773
             + GY+PPFR+LPYGVR  LG+K+ TALRRLARVLPPHFALGRSRQ +GLA A++KLWE+
Sbjct: 413  KIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLPPHFALGRSRQLEGLAMAMIKLWER 472

Query: 774  SLIAKVALKRGVQLTSSERMAEEIKRLTGGSLLCRNKEYIVFYRGKDFLAPEVANXXXXX 953
            S IAKVALKRGVQLT+SERMAE+IK+LTGG LL RNK+++VFYRGK+FL+ +V       
Sbjct: 473  SSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSSDVTEALLER 532

Query: 954  XXXXXXXXXXXXXXXXXXSSSISLNLGTFEDAGTTGTLKETLEANARWGKQLSENAKDEL 1133
                              S+ I+  +G  E  G+ GTL ETLEA+ARWGK+L ++ K ++
Sbjct: 533  ERLAKALQDEEEQARLRASTLITPTVGITEQVGSAGTLGETLEADARWGKRLDDHDKQKM 592

Query: 1134 VKAAELERHGVLVRKLERQLSMAERKMMKAEKGLAQVEEFLKPSETGSVHESITDEERYM 1313
            +K AE+ RH  LVRKLER+L++AERK+MKAE  L++VEEFLKP+   +  ESITDEER+M
Sbjct: 593  LKKAEVARHANLVRKLERRLALAERKLMKAENALSKVEEFLKPANRPADPESITDEERFM 652

Query: 1314 FRKLGLKMKAYLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVKNVALALEAES 1493
            FRKLGL+MKA+LLLGRRGVF GTVENMHLHWKYRELVKIIVKAKTF QVK  ALALE+ES
Sbjct: 653  FRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVKKTALALESES 712

Query: 1494 GGILVSVDKISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKALARSIELQRREALQHHISN 1673
            GG+LVSVDK+SKGFAI+VFRGKDY+RP++LRPKNLLTKRKALARSIELQRREAL +HIS 
Sbjct: 713  GGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLLTKRKALARSIELQRREALYNHISA 772

Query: 1674 LQTKVERLRKELDQMETVKKHGNEELYAKLDVAY 1775
            LQ  VE+LR E++QM+ VK HG+EELY KLD AY
Sbjct: 773  LQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSAY 806


>XP_017621388.1 PREDICTED: CRM-domain containing factor CFM3A,
            chloroplastic/mitochondrial-like [Gossypium arboreum]
            KHG05234.1 Chloroplastic group IIA intron splicing
            facilitator CRS1, chloroplastic [Gossypium arboreum]
          Length = 853

 Score =  701 bits (1808), Expect = 0.0
 Identities = 360/571 (63%), Positives = 444/571 (77%), Gaps = 8/571 (1%)
 Frame = +3

Query: 93   RTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRLKCEGPPALNMKRMHEILERKTGGLVIW 272
            RTKS+ +I GAGVT+E+VD IHEKW+T E+VRLK EG PALNMKRMHEILERKTGGLVIW
Sbjct: 239  RTKSKMRIKGAGVTQEVVDTIHEKWKTMEIVRLKVEGAPALNMKRMHEILERKTGGLVIW 298

Query: 273  RSGSSISLYRGVTY------VNSEMERHRWNTERSKAGSSNNTHN--DKLLQISTAGLET 428
            RSG+SISLYRGV+Y      +N ++ +    +  S    S+ T +  D +     A  +T
Sbjct: 299  RSGTSISLYRGVSYEVPSVHLNKQIYKRNEMSTYSSPLVSDKTEDPSDLVPHKDVAPPQT 358

Query: 429  RKGNASHEMTPRAIEPLKEVNYESEVDKLLDGLGPRYTDWSGFDPLPVDADLLPGVVPGY 608
                A+ E   +  EPL E+ YE EVDKLL+GLGPRY DW G DPLPVDADLLPG+VPGY
Sbjct: 359  NSETATEEH--KNTEPLPEIKYEDEVDKLLEGLGPRYADWPGCDPLPVDADLLPGIVPGY 416

Query: 609  KPPFRVLPYGVRPHLGVKDQTALRRLARVLPPHFALGRSRQHQGLAAAIVKLWEKSLIAK 788
            +PPFRVLPYGVR  LGVK+ T+LRRLARVLPPHFALGRSRQ QGLA A+ KLWEKS IAK
Sbjct: 417  QPPFRVLPYGVRSSLGVKEATSLRRLARVLPPHFALGRSRQLQGLAVAMTKLWEKSSIAK 476

Query: 789  VALKRGVQLTSSERMAEEIKRLTGGSLLCRNKEYIVFYRGKDFLAPEVANXXXXXXXXXX 968
            +ALKRGVQLT+SERMAE++K+LTGG LL RNK+++VFYRGK+FL+ +VA           
Sbjct: 477  IALKRGVQLTTSERMAEDLKKLTGGILLSRNKDFLVFYRGKNFLSADVAEALLERERLAK 536

Query: 969  XXXXXXXXXXXXXSSSISLNLGTFEDAGTTGTLKETLEANARWGKQLSENAKDELVKAAE 1148
                         S+  + +    E +G  GTL ETL+A+ARWGK+L ++ K++++K AE
Sbjct: 537  SLQDVEEQARLRASALFAQSTEVAEQSGAAGTLGETLDADARWGKRLDDHHKEKVLKEAE 596

Query: 1149 LERHGVLVRKLERQLSMAERKMMKAEKGLAQVEEFLKPSETGSVHESITDEERYMFRKLG 1328
            + RH  LVRKLE+ L+ AERK++KAE+ L++VE++LKP++  +  ESITDEER+MFRKLG
Sbjct: 597  ILRHANLVRKLEKNLAFAERKLLKAEQALSKVEDYLKPADRQADPESITDEERFMFRKLG 656

Query: 1329 LKMKAYLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVKNVALALEAESGGILV 1508
            L+MKA+LLLGRRGVFDGT+ENMHLHWKYRELVKII+KAK F QVK VA+ALEAESGG+LV
Sbjct: 657  LRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIMKAKNFDQVKKVAIALEAESGGVLV 716

Query: 1509 SVDKISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKALARSIELQRREALQHHISNLQTKV 1688
            SVDKISKG+AIIV+RG DY RP+++RPKNLLTKR+ALARSIELQRREAL  HIS LQ KV
Sbjct: 717  SVDKISKGYAIIVYRGNDYERPSTIRPKNLLTKRRALARSIELQRREALVKHISALQAKV 776

Query: 1689 ERLRKELDQMETVKKHGNEELYAKLDVAYPS 1781
            E++R E+DQM ++   G+EE Y +LD +YPS
Sbjct: 777  EKIRSEIDQMHSMDARGDEEFYDRLDSSYPS 807


>GAV69603.1 CRS1_YhbY domain-containing protein [Cephalotus follicularis]
          Length = 851

 Score =  700 bits (1807), Expect = 0.0
 Identities = 365/576 (63%), Positives = 438/576 (76%), Gaps = 13/576 (2%)
 Frame = +3

Query: 93   RTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRLKCEGPPALNMKRMHEILERKTGGLVIW 272
            +TKS+TKIGG GVTK +VD I EKW+T E+VR+K EG PALNMKRMHEILERKTGGLVIW
Sbjct: 225  QTKSKTKIGGGGVTKAVVDAIREKWKTSEIVRVKVEGAPALNMKRMHEILERKTGGLVIW 284

Query: 273  RSGSSISLYRGVTY------VNSEMERHRWNTERSKAGSSNNTHNDKL-------LQIST 413
            RSG+++SLYRGV+Y      +N  + +    +  S   + + T+ D+        + +  
Sbjct: 285  RSGTAVSLYRGVSYEVPSVQLNKRIFKRSERSPYSLPAAPDKTNKDRFELRSHSNVDVPL 344

Query: 414  AGLETRKGNASHEMTPRAIEPLKEVNYESEVDKLLDGLGPRYTDWSGFDPLPVDADLLPG 593
            A  ET   +  H    R  E + EV YE EVD+LLDGLGPRYTDWSG DPLPVDAD+L G
Sbjct: 345  ANPETPPQSEEH----RDRELIPEVKYEEEVDQLLDGLGPRYTDWSGCDPLPVDADMLLG 400

Query: 594  VVPGYKPPFRVLPYGVRPHLGVKDQTALRRLARVLPPHFALGRSRQHQGLAAAIVKLWEK 773
            +VP Y+PPFRVLPYGVR  LG  + TALRRLAR LPPHFALGRSRQ QGLA AI+KLWEK
Sbjct: 401  IVPDYQPPFRVLPYGVRSTLGHTEGTALRRLARSLPPHFALGRSRQLQGLALAIIKLWEK 460

Query: 774  SLIAKVALKRGVQLTSSERMAEEIKRLTGGSLLCRNKEYIVFYRGKDFLAPEVANXXXXX 953
            S IAKVALKRGV LT+SERMAEE+K+LTGG LL RNK+++VFYRGKDFL+ +V       
Sbjct: 461  SSIAKVALKRGVMLTTSERMAEELKKLTGGMLLSRNKDFLVFYRGKDFLSIDVTEVLVER 520

Query: 954  XXXXXXXXXXXXXXXXXXSSSISLNLGTFEDAGTTGTLKETLEANARWGKQLSENAKDEL 1133
                              S+ +  N+ T E A T GTL ETL+AN+RWGK L E  K+ +
Sbjct: 521  ERLAKSLQDEEEHARVRASAFVLPNIETHEQARTAGTLGETLDANSRWGKTLDECLKENV 580

Query: 1134 VKAAELERHGVLVRKLERQLSMAERKMMKAEKGLAQVEEFLKPSETGSVHESITDEERYM 1313
            +K A + RH  LVRKLER L+ AERK+MKAE+ L++VEEFLKP+E  +  ESIT+EER+M
Sbjct: 581  MKEAAIVRHANLVRKLERNLAFAERKLMKAERALSKVEEFLKPTERQAEPESITEEERFM 640

Query: 1314 FRKLGLKMKAYLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVKNVALALEAES 1493
            FRKLGL+MKA+LLLGRRGVFDGTVENMHLHWKYREL+KI+V AK+F  VK VALALEAES
Sbjct: 641  FRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVNAKSFDHVKKVALALEAES 700

Query: 1494 GGILVSVDKISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKALARSIELQRREALQHHISN 1673
            GG+LVSVDK+SKG+A+IVFRGKDY+RP+ +RPKNLLTKRKALARSIELQRREAL  HIS 
Sbjct: 701  GGVLVSVDKVSKGYAVIVFRGKDYQRPSKIRPKNLLTKRKALARSIELQRREALLSHISA 760

Query: 1674 LQTKVERLRKELDQMETVKKHGNEELYAKLDVAYPS 1781
            +QTKV++LR E++QM+TVK  G EE Y KLD AYP+
Sbjct: 761  VQTKVDKLRAEIEQMDTVKDQGAEEFYDKLDSAYPT 796


>XP_016712545.1 PREDICTED: CRM-domain containing factor CFM3A,
            chloroplastic/mitochondrial-like [Gossypium hirsutum]
          Length = 853

 Score =  700 bits (1806), Expect = 0.0
 Identities = 359/571 (62%), Positives = 446/571 (78%), Gaps = 8/571 (1%)
 Frame = +3

Query: 93   RTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRLKCEGPPALNMKRMHEILERKTGGLVIW 272
            RTKS+ +I GAGVT+E+VD IHEKW+T E+VRLK EG PALNMKRMHEILERKTGGLVIW
Sbjct: 239  RTKSKMRIKGAGVTQEVVDTIHEKWKTMEIVRLKVEGAPALNMKRMHEILERKTGGLVIW 298

Query: 273  RSGSSISLYRGVTYVNSEMERHRWNTERSKAGS------SNNTHN--DKLLQISTAGLET 428
            RSG+SISLYRGV+Y  + +  ++   +R++  +      S+ T +  D +     A  +T
Sbjct: 299  RSGTSISLYRGVSYEVASVHLNKQIYKRNEMSTFSSPLVSDKTEDPSDLVPHKDVAPPQT 358

Query: 429  RKGNASHEMTPRAIEPLKEVNYESEVDKLLDGLGPRYTDWSGFDPLPVDADLLPGVVPGY 608
                A+ E   +  EPL E+ YE EVDKLL+GLGPRY DW G DPLPVDADLLPG+VPGY
Sbjct: 359  NSETATEEH--KNTEPLPEIKYEDEVDKLLEGLGPRYADWPGCDPLPVDADLLPGIVPGY 416

Query: 609  KPPFRVLPYGVRPHLGVKDQTALRRLARVLPPHFALGRSRQHQGLAAAIVKLWEKSLIAK 788
            +PPFRVLPYGVR  LGVK+ T+LRRLARVLPPHFALGRSRQ QGLA A+ KLWEKS IAK
Sbjct: 417  QPPFRVLPYGVRSSLGVKEATSLRRLARVLPPHFALGRSRQLQGLAVAMTKLWEKSSIAK 476

Query: 789  VALKRGVQLTSSERMAEEIKRLTGGSLLCRNKEYIVFYRGKDFLAPEVANXXXXXXXXXX 968
            +ALKRGVQLT+SERMAE++K+LTGG LL RNK+++VFYRGK+FL+ +VA           
Sbjct: 477  IALKRGVQLTTSERMAEDLKKLTGGILLSRNKDFLVFYRGKNFLSADVAEALLERERLAK 536

Query: 969  XXXXXXXXXXXXXSSSISLNLGTFEDAGTTGTLKETLEANARWGKQLSENAKDELVKAAE 1148
                         S+  + +    E +G  GTL ETL+A+ARWGK+L ++ K++++K AE
Sbjct: 537  SLQDVEEQARLRASALFAQSTEVAEQSGAAGTLGETLDADARWGKRLDDHHKEKVLKEAE 596

Query: 1149 LERHGVLVRKLERQLSMAERKMMKAEKGLAQVEEFLKPSETGSVHESITDEERYMFRKLG 1328
            + RH  LVRKLE+ L+ AERK++KAE+ L++VE++LKP++  +  ESITDEER+MFRKLG
Sbjct: 597  ILRHANLVRKLEKNLAFAERKLLKAERTLSKVEDYLKPADRQADPESITDEERFMFRKLG 656

Query: 1329 LKMKAYLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVKNVALALEAESGGILV 1508
            L+MKA+LLLGRRGVFDGT+ENMHLHWKYRELVKII+KAK F QVK VA+ALEAESGG+LV
Sbjct: 657  LRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIMKAKNFDQVKKVAIALEAESGGVLV 716

Query: 1509 SVDKISKGFAIIVFRGKDYRRPTSLRPKNLLTKRKALARSIELQRREALQHHISNLQTKV 1688
            SVDKISKG+AIIV+RG DY RP+++RPKNLLTKR+ALARSIELQRREAL  HIS LQ KV
Sbjct: 717  SVDKISKGYAIIVYRGNDYERPSTIRPKNLLTKRRALARSIELQRREALVKHISALQAKV 776

Query: 1689 ERLRKELDQMETVKKHGNEELYAKLDVAYPS 1781
            E++R E+DQM ++   G+EE Y +LD +YPS
Sbjct: 777  EKIRSEIDQMHSMDARGDEEFYDRLDSSYPS 807


>XP_006838849.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Amborella trichopoda] ERN01418.1
            hypothetical protein AMTR_s00002p00265220 [Amborella
            trichopoda]
          Length = 882

 Score =  700 bits (1807), Expect = 0.0
 Identities = 368/601 (61%), Positives = 445/601 (74%), Gaps = 11/601 (1%)
 Frame = +3

Query: 12   RKKRSKXXXXXXXXXXXXXXXXXXXAIRTKSRTKIGGAGVTKEIVDKIHEKWQTEEVVRL 191
            RK RS+                   A+R K RTKI GAGVT+ IVD IH+KW++EE+VR+
Sbjct: 209  RKTRSRTSLAELTLPASEIRRLTNLALRMKGRTKIKGAGVTQAIVDSIHKKWKSEEIVRI 268

Query: 192  KCEGPPALNMKRMHEILERKTGGLVIWRSGSSISLYRGVTYVNSEMERHRWNTERSKAGS 371
            KCEG P LNMKR HEILERKTGGLVIWRSGSSI LYRG+ Y  S+ +  +  T+ ++  +
Sbjct: 269  KCEGAPTLNMKRSHEILERKTGGLVIWRSGSSIVLYRGINYDVSDEKPAKKQTQVNRNFN 328

Query: 372  SNNTHNDKLLQISTAGLETR--------KGNASHEMTPRAIEPLKEVNYESEVDKLLDGL 527
             N +  D++    +  + +R        KG      T    EP  +VNYE EVD+LL+GL
Sbjct: 329  RNGSAIDEVNGSFSESVSSRDLQRFPEEKGVNIENKTET--EPPNKVNYEKEVDQLLEGL 386

Query: 528  GPRYTDWSGFDPLPVDADLLPGVVPGYKPPFRVLPYGVRPHLGVKDQTALRRLARVLPPH 707
            GPRY DW+G DPLPVDADLLPGVVPGYKPPFR+LPYG+R  LG  + T LRRLARVLPPH
Sbjct: 387  GPRYNDWAGCDPLPVDADLLPGVVPGYKPPFRLLPYGMRFSLGRTEMTTLRRLARVLPPH 446

Query: 708  FALGRSRQHQGLAAAIVKLWEKSLIAKVALKRGVQLTSSERMAEEIKRLTGGSLLCRNKE 887
            FALGRSRQHQGLA A+VK+WEKS I K+ALKRGVQ T  ERMAE+IK LTGG+LL RNK+
Sbjct: 447  FALGRSRQHQGLAVAMVKVWEKSSIVKIALKRGVQNTCGERMAEQIKSLTGGTLLSRNKD 506

Query: 888  YIVFYRGKDFLAPEVANXXXXXXXXXXXXXXXXXXXXXXXSSSISLNLGTF---EDAGTT 1058
            ++VFYRGKDFL+PEV                         ++SI  ++ T    E+   +
Sbjct: 507  FMVFYRGKDFLSPEVTEALLERERLAKALQDEEENARLYATASIISDVSTTTAKEEPRFS 566

Query: 1059 GTLKETLEANARWGKQLSENAKDELVKAAELERHGVLVRKLERQLSMAERKMMKAEKGLA 1238
            GTL ETLEA+ARWGK L    K++++KAAE  RH  LVRKLER+L +A++K M+AEK LA
Sbjct: 567  GTLSETLEASARWGKNLDSEEKEKMIKAAEATRHAGLVRKLERKLDLAQQKAMRAEKALA 626

Query: 1239 QVEEFLKPSETGSVHESITDEERYMFRKLGLKMKAYLLLGRRGVFDGTVENMHLHWKYRE 1418
            +VEEFLKP++     ESITDEER+MFRKLGL+MKAYLLLG+RGVFDGTVENMHLHWKYRE
Sbjct: 627  KVEEFLKPTDQSRDQESITDEERFMFRKLGLRMKAYLLLGKRGVFDGTVENMHLHWKYRE 686

Query: 1419 LVKIIVKAKTFAQVKNVALALEAESGGILVSVDKISKGFAIIVFRGKDYRRPTSLRPKNL 1598
            L+KII+KAK F  VKN+AL+LEAESGGILVSVDKISKG+AIIV+RGK Y+RP  LRP+NL
Sbjct: 687  LIKIILKAKNFGHVKNIALSLEAESGGILVSVDKISKGYAIIVYRGKGYKRPRLLRPQNL 746

Query: 1599 LTKRKALARSIELQRREALQHHISNLQTKVERLRKELDQMETVKKHGNEELYAKLDVAYP 1778
            LTKRKALARSIELQRREAL +HISNLQ +V+ L+ EL QME++K+ G+E+LYAKLD  Y 
Sbjct: 747  LTKRKALARSIELQRREALNNHISNLQKRVQTLKSELAQMESIKEKGDEDLYAKLDSVYC 806

Query: 1779 S 1781
            S
Sbjct: 807  S 807