BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00006992
         (1941 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010278441.1 PREDICTED: RNA polymerase sigma factor sigB-like ...   350   e-109
XP_008805674.1 PREDICTED: RNA polymerase sigma factor sigB [Phoe...   348   e-108
XP_010251515.1 PREDICTED: RNA polymerase sigma factor sigB-like ...   348   e-108
JAT59858.1 RNA polymerase sigma factor rpoD [Anthurium amnicola]      346   e-108
XP_010918654.1 PREDICTED: RNA polymerase sigma factor sigB [Elae...   330   e-101
XP_011623893.1 PREDICTED: RNA polymerase sigma factor sigB [Ambo...   328   e-101
OMP03365.1 RNA polymerase sigma-70 [Corchorus capsularis]             324   2e-99
XP_015895073.1 PREDICTED: RNA polymerase sigma factor sigB [Zizi...   324   3e-99
KJB46069.1 hypothetical protein B456_007G347300 [Gossypium raimo...   321   4e-99
XP_017627350.1 PREDICTED: RNA polymerase sigma factor sigB [Goss...   323   9e-99
KJB46073.1 hypothetical protein B456_007G347300 [Gossypium raimo...   321   2e-98
XP_012434812.1 PREDICTED: RNA polymerase sigma factor sigB [Goss...   321   3e-98
XP_017977747.1 PREDICTED: RNA polymerase sigma factor sigB isofo...   321   4e-98
XP_010661180.1 PREDICTED: RNA polymerase sigma factor sigB [Viti...   321   4e-98
XP_010943391.1 PREDICTED: RNA polymerase sigma factor sigB-like ...   320   7e-98
XP_012070322.1 PREDICTED: RNA polymerase sigma factor sigB [Jatr...   319   2e-97
KDO49413.1 hypothetical protein CISIN_1g007404mg [Citrus sinensi...   314   7e-97
ERM94758.1 hypothetical protein AMTR_s00011p00258380 [Amborella ...   317   8e-97
XP_016755384.1 PREDICTED: RNA polymerase sigma factor sigB-like ...   317   2e-96
XP_017977746.1 PREDICTED: RNA polymerase sigma factor sigB isofo...   316   4e-96

>XP_010278441.1 PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
          Length = 572

 Score =  350 bits (897), Expect = e-109
 Identities = 209/420 (49%), Positives = 244/420 (58%), Gaps = 14/420 (3%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVH-----SHLKSRMFLCVRAQCI-------STATV 495
            MACLLPQFKC+PDT L+     H H H     S LK+R  LC R QCI        T TV
Sbjct: 1    MACLLPQFKCSPDT-LSIHFKTHQHQHHYSNNSQLKARDLLCFRTQCILSTTTATMTTTV 59

Query: 496  ADIEKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXX 675
             D EKL +PS E+H  SV A RPLTY GAI PP +  F+ T+ TE L             
Sbjct: 60   VDDEKLRMPSLEAHLISVPADRPLTYIGAIDPPTKAKFEATLATEPLITGDEALIAAAAV 119

Query: 676  XXXXXXXXXXXMAKDAAQMVGSTPFPRPGNHD-DSNHEYDALRLEMSRLSEIESRETPEC 852
                       +AKDAA MV + P  +      D   E D    E ++L+EIE  +    
Sbjct: 120  EAVALAKAAVEIAKDAALMVSTNPSSKSDKWPPDIPSELDTYWHETAQLNEIEQVDMVHH 179

Query: 853  SSTKKVESEDEQVVEFSPSDTEDAVENKLQLLQINDSSEVAVRSGRQTERKXXXXXXXXX 1032
            S   +   +++       SD  D  + +L+LLQ+  S  +AVRSGRQTER+         
Sbjct: 180  SLGAESRPKED-------SDYLDPTDEELKLLQMQLSKSIAVRSGRQTERRARRARAAEK 232

Query: 1033 XXXXXXXXXXXXXXXXXXT-LQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXX 1209
                              + LQ++DYSDP               A+EE+E S+GI     
Sbjct: 233  VAANVVAVKSGSSSRKKRSALQDVDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQDLLK 292

Query: 1210 XXXXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKN 1389
                     +R+G QPTFAQWAAAAGID K+LRK LNYGILCKDKMIKSNIRLVISIAKN
Sbjct: 293  LEKLYEELAERYGGQPTFAQWAAAAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKN 352

Query: 1390 YQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1569
            YQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 353  YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 412


>XP_008805674.1 PREDICTED: RNA polymerase sigma factor sigB [Phoenix dactylifera]
          Length = 566

 Score =  348 bits (892), Expect = e-108
 Identities = 195/410 (47%), Positives = 243/410 (59%), Gaps = 4/410 (0%)
 Frame = +1

Query: 352  MACLLPQFKC---APDTHLASRSPCHYHVHSHLKSRMFLCVRAQCISTATVADIEKLHIP 522
            MACL+PQFKC   +PD H     P  +H   + K+R  +C R+ C+ST T A I+   IP
Sbjct: 1    MACLVPQFKCPSISPDAHFR---PLSHHPSLNSKARDSVCFRSPCVSTLTAAVIDIQRIP 57

Query: 523  SFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXXXXXXXXXX 702
            S E+H+TS+ A RPLTY GA+GPP++ S + T+ TETL                      
Sbjct: 58   SLEAHSTSLDATRPLTYVGAVGPPMKTSIEATLATETLLTGEEAVIAAAAAEAVALARAA 117

Query: 703  XXMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPECSSTKKVESED 882
              +AKDAAQ++G+ P  +    +D + E DA RLE  RL+E+E   T   S+    E  +
Sbjct: 118  VEVAKDAAQIIGNDPSVKLEKSEDFSSEADAFRLERVRLTEMELIRTTNNSTPTDTEPHE 177

Query: 883  EQVVEFSPSDTEDAVENKLQLLQINDSSEVAVRSGRQTERKXXXXXXXXXXXXXXXXXXX 1062
             +      +D  +    +L+  Q+     +AVRSGRQT+RK                   
Sbjct: 178  AKDPS-QGTDVSNLTHKELESQQMQYPESIAVRSGRQTDRKARRTRAAEKAAVSVIPVKS 236

Query: 1063 XXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXXXXXXXXXXTK 1239
                     T QE+DYSDP               A+EE+ELS+ I              +
Sbjct: 237  GSTSKKKRSTFQEVDYSDPLRYLRGTTSTSKLLTAAEELELSEAIQDMLKLERLQQELAE 296

Query: 1240 RFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQD 1419
            R G QPTFAQWAAAAG+D ++LRK LNYG  CKDKMIKSNIRLVISIAKNYQGAGMNLQD
Sbjct: 297  RHGGQPTFAQWAAAAGVDQRTLRKRLNYGRFCKDKMIKSNIRLVISIAKNYQGAGMNLQD 356

Query: 1420 LVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1569
            LVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVR+SLS+QSRTIRLP
Sbjct: 357  LVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLP 406


>XP_010251515.1 PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
            nucifera]
          Length = 584

 Score =  348 bits (893), Expect = e-108
 Identities = 204/424 (48%), Positives = 248/424 (58%), Gaps = 18/424 (4%)
 Frame = +1

Query: 352  MACLLPQFKCAPDT-------HLASRSPCHYHVHSHLKSRMFLCVRAQCI-------STA 489
            MACLLPQFKC+PDT       H       H+  ++H KSR  L  + QC+        T 
Sbjct: 1    MACLLPQFKCSPDTISIHFRTHQLQHHKHHHCNNNHSKSRDLLSFQTQCVLSTTTTAMTT 60

Query: 490  TVADIEKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXX 669
            T+ D+EKL +PS ESH+ SV + RPL+Y GA GPP + SF+ T+  E+L           
Sbjct: 61   TLVDVEKLRMPSLESHSISVASDRPLSYIGATGPPTKASFEATLAMESLITGDEALIAAA 120

Query: 670  XXXXXXXXXXXXXMAKDAAQMVGSTPFPRPGNH-DDSNHEYDALRLEMSRLSEIESRETP 846
                         +AKDAA MV         N   D + E    RLE ++L+E +     
Sbjct: 121  AAEAVALAKEAVEVAKDAALMVNDKSSSESENGPSDFSSESHIFRLEKAQLTETQEVGRI 180

Query: 847  ECSSTKKVESEDEQVVEFSPSDTE--DAVENKLQLLQINDSSEVAVRSGRQTERKXXXXX 1020
            + S   +   E+EQ V+FS  D++  D+ + + +LLQ+     +AVRSGRQTER+     
Sbjct: 181  DHSVGLESRQEEEQSVQFSNKDSDGLDSSDEEFKLLQMQLLKSIAVRSGRQTERQARRAR 240

Query: 1021 XXXXXXXXXXXXXXXXXXXXXXT-LQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIX 1197
                                    LQ+IDYSDP               A+EE+ELS+GI 
Sbjct: 241  AMEKASTNVLSVKSGHSSRKRRAALQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGIQ 300

Query: 1198 XXXXXXXXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVIS 1377
                         +R G QPTFAQWAAAAG+D K+LRK LNYGILCKDKMIKSNIRLVIS
Sbjct: 301  DLLKLEKLHEELAERCGGQPTFAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 360

Query: 1378 IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRT 1557
            IAKNYQGAGMNLQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 361  IAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 420

Query: 1558 IRLP 1569
            IRLP
Sbjct: 421  IRLP 424


>JAT59858.1 RNA polymerase sigma factor rpoD [Anthurium amnicola]
          Length = 563

 Score =  346 bits (887), Expect = e-108
 Identities = 197/410 (48%), Positives = 239/410 (58%), Gaps = 4/410 (0%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVHSHLKSRMFLCVRAQCI-STATVADIEKLHIPSF 528
            M+CL PQFK  PD H + R        S  K+R  +C R QC+ S+AT+   E+L I + 
Sbjct: 1    MSCLAPQFKRPPDAHFSIRP-------SQAKARDIVCFRGQCVMSSATMVCTERLQISTL 53

Query: 529  ESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXXXXXXXXXXXX 708
            ESH+ SVTA+RPL Y GA+GPP +  F+  + TE L                        
Sbjct: 54   ESHSASVTAVRPLPYVGAVGPPAEMDFEVALATENLLKDEESVIAAAAAEAVALARAAAE 113

Query: 709  MAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPECSSTKKVESEDEQ 888
            +AKDAAQMVG  P  +    DD       LRLE SRL +     T + S+T +   + +Q
Sbjct: 114  VAKDAAQMVGMLPSQKLDKSDDFPSNLSFLRLETSRLIQNGHLATFKSSATTEGWPDGDQ 173

Query: 889  VVEFSPSDTEDAVE--NKLQLLQINDSSEVAVRSGRQTERKXXXXXXXXXXXXXXXXXXX 1062
            + +F   D  ++    N ++ L+   S  +A+RSGRQ ERK                   
Sbjct: 174  ISQFLSKDAHNSSSKGNDVKHLETQHSKNIAIRSGRQNERKARRARVAEKAATGAISVKS 233

Query: 1063 XXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXXXXXXXXXXTK 1239
                      LQEIDYSDP               A+EE+ELS+GI              +
Sbjct: 234  GSSGRKKRGALQEIDYSDPLYYLRATTCTSRLLTATEELELSEGIQDLLKLEKLQEELAE 293

Query: 1240 RFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQD 1419
            R+G QPTFAQWAAAAG+D K+LRK LNYG+ CKDKMIKSNIRLVISIAKNYQGAGMNL D
Sbjct: 294  RYGGQPTFAQWAAAAGVDQKTLRKRLNYGMFCKDKMIKSNIRLVISIAKNYQGAGMNLPD 353

Query: 1420 LVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1569
            LVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSL+DQSRTIRLP
Sbjct: 354  LVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLTDQSRTIRLP 403


>XP_010918654.1 PREDICTED: RNA polymerase sigma factor sigB [Elaeis guineensis]
          Length = 566

 Score =  330 bits (846), Expect = e-101
 Identities = 194/415 (46%), Positives = 241/415 (58%), Gaps = 8/415 (1%)
 Frame = +1

Query: 352  MACLLPQFKC---APDTHLASRSPCHYHVHS-HLKSRMFLCVRAQCISTATVADIEKLHI 519
            MACL+PQFKC   +P+ H  S S    H+ S + K+R  +C R+QC+ST T A I+   I
Sbjct: 1    MACLVPQFKCPSISPEAHFRSVS----HLPSLNSKARDSVCFRSQCVSTQTAAVIDIQRI 56

Query: 520  PSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXXXXXXXXX 699
            PS E+ + S+   RPLTY G++GPP++   + T+ TETL                     
Sbjct: 57   PSLEARSNSLDDTRPLTYVGSVGPPMKTGIEATLATETLLTGEEAVVAAAAAEAVALARA 116

Query: 700  XXXMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPECSSTKKVESE 879
               +AKDAAQ++ + P  +    +D + E DA  LE  R +E+    T   S+    E  
Sbjct: 117  AVEVAKDAAQIIRNDPSVKLEKSEDFSSEADAFWLERVRHNEMGLIRTTHHSTPTDTEPH 176

Query: 880  DEQVVEFSPS---DTEDAVENKLQLLQINDSSEVAVRSGRQTERKXXXXXXXXXXXXXXX 1050
            + +     PS   D  +   N+LQ  Q+     +AVRSGRQTERK               
Sbjct: 177  EAK----DPSQDIDVSNLTNNELQSQQMQYPESIAVRSGRQTERKARRARAEEKAAVSVI 232

Query: 1051 XXXXXXXXXXXXT-LQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXXXXXXXX 1227
                        +  QEIDYSDP               A+EE+ELSKGI           
Sbjct: 233  PIKSGSSSKKKRSAFQEIDYSDPLHYLRGTTSTSKLLTAAEELELSKGIQDLLKLEKLRE 292

Query: 1228 XXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKNYQGAGM 1407
               +R G QPTFAQWAAAAG+D ++LRK LNYG  CKDKMIKSNIRLVISIAKNYQGAGM
Sbjct: 293  ELAERHGGQPTFAQWAAAAGVDQRTLRKRLNYGGFCKDKMIKSNIRLVISIAKNYQGAGM 352

Query: 1408 NLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPL 1572
            NLQDLVQEGCRGLV+GAE+FDA KGFKFSTYAHWWIKQAVR+SLS+QSRTIRLP+
Sbjct: 353  NLQDLVQEGCRGLVKGAERFDALKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPI 407


>XP_011623893.1 PREDICTED: RNA polymerase sigma factor sigB [Amborella trichopoda]
          Length = 563

 Score =  328 bits (842), Expect = e-101
 Identities = 196/413 (47%), Positives = 243/413 (58%), Gaps = 7/413 (1%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVHSHLKSRMFLCVRAQCIS-TATVA-DIEKLHIPS 525
            MAC+LPQF      H+ +        H++L++R   C + QC+S TATV  D++K+ +PS
Sbjct: 1    MACMLPQF-----IHIRTS------YHNNLRTREATCFQTQCVSSTATVVVDVDKVRVPS 49

Query: 526  FESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXXXXXXXXXXX 705
               H+TSV+   PLTY G IG   +  F+  + TE+L                       
Sbjct: 50   LGGHSTSVSTHGPLTYVGTIGSQKKTDFEAALVTESLLKSEEAIIAAAAAEAIALAKAAA 109

Query: 706  XMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPECSSTKKVESEDE 885
             +AKDAA MVGS P  R    DD   E D LRL+ +RL+E+E   + + SS   +   D+
Sbjct: 110  KLAKDAALMVGSVPPSRSDKVDDFPSEADILRLQRARLTEMERIGSMDGSSIAGIGPRDK 169

Query: 886  Q--VVEFSPSDTED--AVENKLQLLQINDSSEVAVRSGRQTERKXXXXXXXXXXXXXXXX 1053
               V + SP++  D  + EN L+ LQ+  S  VAVRS RQTER+                
Sbjct: 170  HKSVNQLSPNEMADKQSRENILEALQLQHSQRVAVRSRRQTERRARRAKGVEKAAANAIT 229

Query: 1054 XXXXXXXXXXXT-LQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXXXXXXXXX 1230
                         LQEIDYSDP               A+EE+ELS+GI            
Sbjct: 230  VKLGTTSRRKRAPLQEIDYSDPLRYLRGTTNSTKLLTATEELELSEGIQDLLKLEKLHKE 289

Query: 1231 XTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKNYQGAGMN 1410
             T+RFG +PTF QWAAAAGID K+LR+ L+YG  CKDKMIKSNIRLVISIAKNYQG G++
Sbjct: 290  LTERFGGEPTFVQWAAAAGIDQKALRRRLSYGTHCKDKMIKSNIRLVISIAKNYQGVGLS 349

Query: 1411 LQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1569
            +QDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 350  IQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 402


>OMP03365.1 RNA polymerase sigma-70 [Corchorus capsularis]
          Length = 576

 Score =  324 bits (831), Expect = 2e-99
 Identities = 196/417 (47%), Positives = 232/417 (55%), Gaps = 11/417 (2%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVHSHLKSRMFLCVRAQCI--------STATVA--D 501
            M+CLLPQFKC PDT        H H   H K +  +C R QC+        STAT A  D
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSH---HSKHKESICFRTQCVLSTSSPSTSTATTAVLD 57

Query: 502  IEKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXXX 681
            +EKL +PSFE+   SV A RP  Y GA GPP + SF  ++TTE L               
Sbjct: 58   LEKLRLPSFEAQPNSVVADRPW-YRGATGPPSEASFGASLTTENLLKSDDAVIASAAAEA 116

Query: 682  XXXXXXXXXMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPECSST 861
                     +AKDAA M  S    +       +   D L  + +  +E E       S T
Sbjct: 117  VALARAAVKVAKDAALMAKSFNSSKIEMKSTVSSATDTLTSKWALFTEAERAGIVGDSPT 176

Query: 862  KKVESEDEQVVEFSPSDTEDAVENKLQLLQINDSSEVAVRSGRQTERKXXXXXXXXXXXX 1041
             + + +D +    + SD  +    +L+ L+   S  +AVRS RQTERK            
Sbjct: 177  NESDEDDSEEKSTTESDKLEPTNEELEYLEEQLSRSIAVRSRRQTERKAKRTRAAEKASS 236

Query: 1042 XXXXXXXXXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXXXXX 1218
                             LQE+DYSDP               A+EE+ELS+GI        
Sbjct: 237  NAVSLRSGSNSRKKRGALQEVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLER 296

Query: 1219 XXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKNYQG 1398
                  +R G QPTF+QWAAAAG+D K+LR+ LNYGILCKDKMIKSNIRLVISIAKNYQG
Sbjct: 297  LEEELRERCGGQPTFSQWAAAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQG 356

Query: 1399 AGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1569
            AGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 357  AGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 413


>XP_015895073.1 PREDICTED: RNA polymerase sigma factor sigB [Ziziphus jujuba]
          Length = 573

 Score =  324 bits (830), Expect = 3e-99
 Identities = 196/420 (46%), Positives = 241/420 (57%), Gaps = 14/420 (3%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVHSHL-KSRMFLCVRAQCI----------STATVA 498
            M+CLLPQFKC PDT          H  +HL K R  +     CI          +T TV 
Sbjct: 1    MSCLLPQFKCQPDTF-------SIHFRTHLPKPRDSISSWPHCILSTSSPSTSMATTTVL 53

Query: 499  DIEKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXX 678
            ++EKL +PS ++++ SVTA RP TYTGAIGPP + + + T+ TETL              
Sbjct: 54   NLEKLRLPSLDANSDSVTANRPWTYTGAIGPPAKANLEATLATETLLTSEEAVIAAAAAE 113

Query: 679  XXXXXXXXXXMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPECSS 858
                      +AKDA  ++ + P  R  +    + E DAL L+  +  +         S 
Sbjct: 114  AVTLAKAAVKVAKDATLLINNNPCTRAESTSLFSPEDDALHLKWPQHMKTGQPVRLGDSM 173

Query: 859  TKKVESEDEQVVEFSPSDTEDA--VENKLQLLQINDSSEVAVRSGRQTERKXXXXXXXXX 1032
              K    D+  ++ +  + +D      +L+LLQ   S+ +AVRS RQTERK         
Sbjct: 174  GPKTAQLDDYSMQCAIKEADDLEPTHEELELLQSQLSNGIAVRSRRQTERKARRTRAAEK 233

Query: 1033 XXXXXXXXXXXXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXX 1209
                               +LQ+ID+SDP               A+EEIELS+GI     
Sbjct: 234  AAATVVSVKSGSTVRKKRASLQDIDHSDPLRYLRATTSTSRLLTATEEIELSEGIQDLLK 293

Query: 1210 XXXXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKN 1389
                    T+R GSQPTFAQWAAAAG+D K+LR+ +NYGILCKDKMIKSNIRLVISIAKN
Sbjct: 294  LEKLQEELTERCGSQPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNIRLVISIAKN 353

Query: 1390 YQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1569
            YQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 354  YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 413


>KJB46069.1 hypothetical protein B456_007G347300 [Gossypium raimondii]
          Length = 498

 Score =  321 bits (823), Expect = 4e-99
 Identities = 191/418 (45%), Positives = 232/418 (55%), Gaps = 12/418 (2%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVHSHLKSRMFLCVRAQCI---------STATVADI 504
            M+CLLPQFKC PDT        H H   H K +  +C R+QC+         +T  V D+
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRAHHSH---HSKHKESICFRSQCVLSTTSSTSMATTAVLDV 57

Query: 505  EKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXXXX 684
            EKL +PSFE+H+ SV   RP TYTGA GPP + SF  T+ TE L                
Sbjct: 58   EKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAAAAEAV 117

Query: 685  XXXXXXXXMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPECSSTK 864
                    +AKDAA MV +    +       +   D L  +    +E E         + 
Sbjct: 118  ALARAAAKVAKDAAIMVKNHGSAKTEMKSPGSSATDTLTSKWGLFTEAERAGIVGDYVSD 177

Query: 865  KVESEDEQVVEFSP--SDTEDAVENKLQLLQINDSSEVAVRSGRQTERKXXXXXXXXXXX 1038
            ++E E++ + + S   SD  +    +L+LL+   S  +AVRS RQTERK           
Sbjct: 178  ELELEEDHLEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSHRQTERKAKRTRAAEKAA 237

Query: 1039 XXXXXXXXXXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXXXX 1215
                              LQ+IDYSDP               A+EE+ELS+GI       
Sbjct: 238  TNVVSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQDLLKLE 297

Query: 1216 XXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKNYQ 1395
                   +R G  PTFAQWAAAA +D K+LR+ LNYG +C DKMIKSNIRLVISIAKNYQ
Sbjct: 298  GLHEELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICMDKMIKSNIRLVISIAKNYQ 357

Query: 1396 GAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1569
            GAGMNLQDLVQEGCRGL+RGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 358  GAGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 415


>XP_017627350.1 PREDICTED: RNA polymerase sigma factor sigB [Gossypium arboreum]
            KHG18437.1 RNA polymerase sigma factor rpoD [Gossypium
            arboreum]
          Length = 578

 Score =  323 bits (827), Expect = 9e-99
 Identities = 194/418 (46%), Positives = 233/418 (55%), Gaps = 12/418 (2%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVHSHLKSRMFLCVRAQCI-------STATVA--DI 504
            M+CLLPQFKC PDT        H H   H K +  +C R+QC+       STAT A  D+
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRAHHSH---HSKHKESICFRSQCVLSTTSSTSTATTAVLDV 57

Query: 505  EKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXXXX 684
            EKL +PSFE+H+ SV   RP TYTGA GPP + SF  T+ TE L                
Sbjct: 58   EKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAAAAEAV 117

Query: 685  XXXXXXXXMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPECSSTK 864
                    +AKDAA MV +    +       +   D L  +    +E E         + 
Sbjct: 118  ALARAAAKVAKDAAIMVKNHSSAKTEMKSPGSSATDTLTSKWGLFTEAERAGIVGDYVSD 177

Query: 865  KVESEDEQVVEFSP--SDTEDAVENKLQLLQINDSSEVAVRSGRQTERKXXXXXXXXXXX 1038
            ++E E++   + S   SD  +    +L+LL+   S  +AVRS RQ ERK           
Sbjct: 178  ELEMEEDDFEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSNRQPERKAKRTRAAEKAA 237

Query: 1039 XXXXXXXXXXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXXXX 1215
                              LQ+IDYSDP               A+EE+ELS+GI       
Sbjct: 238  TNVVSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQDLLKLE 297

Query: 1216 XXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKNYQ 1395
                   +R G  PTFAQWAAAA +D K+LR+ LNYG +CKDKMIKSNIRLVISIAKNYQ
Sbjct: 298  VLHEELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICKDKMIKSNIRLVISIAKNYQ 357

Query: 1396 GAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1569
            GAGMNLQDLVQEGCRGL+RGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 358  GAGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 415


>KJB46073.1 hypothetical protein B456_007G347300 [Gossypium raimondii]
          Length = 560

 Score =  321 bits (823), Expect = 2e-98
 Identities = 191/418 (45%), Positives = 232/418 (55%), Gaps = 12/418 (2%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVHSHLKSRMFLCVRAQCI---------STATVADI 504
            M+CLLPQFKC PDT        H H   H K +  +C R+QC+         +T  V D+
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRAHHSH---HSKHKESICFRSQCVLSTTSSTSMATTAVLDV 57

Query: 505  EKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXXXX 684
            EKL +PSFE+H+ SV   RP TYTGA GPP + SF  T+ TE L                
Sbjct: 58   EKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAAAAEAV 117

Query: 685  XXXXXXXXMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPECSSTK 864
                    +AKDAA MV +    +       +   D L  +    +E E         + 
Sbjct: 118  ALARAAAKVAKDAAIMVKNHGSAKTEMKSPGSSATDTLTSKWGLFTEAERAGIVGDYVSD 177

Query: 865  KVESEDEQVVEFSP--SDTEDAVENKLQLLQINDSSEVAVRSGRQTERKXXXXXXXXXXX 1038
            ++E E++ + + S   SD  +    +L+LL+   S  +AVRS RQTERK           
Sbjct: 178  ELELEEDHLEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSHRQTERKAKRTRAAEKAA 237

Query: 1039 XXXXXXXXXXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXXXX 1215
                              LQ+IDYSDP               A+EE+ELS+GI       
Sbjct: 238  TNVVSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQDLLKLE 297

Query: 1216 XXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKNYQ 1395
                   +R G  PTFAQWAAAA +D K+LR+ LNYG +C DKMIKSNIRLVISIAKNYQ
Sbjct: 298  GLHEELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICMDKMIKSNIRLVISIAKNYQ 357

Query: 1396 GAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1569
            GAGMNLQDLVQEGCRGL+RGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 358  GAGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 415


>XP_012434812.1 PREDICTED: RNA polymerase sigma factor sigB [Gossypium raimondii]
            KJB46070.1 hypothetical protein B456_007G347300
            [Gossypium raimondii]
          Length = 578

 Score =  321 bits (823), Expect = 3e-98
 Identities = 191/418 (45%), Positives = 232/418 (55%), Gaps = 12/418 (2%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVHSHLKSRMFLCVRAQCI---------STATVADI 504
            M+CLLPQFKC PDT        H H   H K +  +C R+QC+         +T  V D+
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRAHHSH---HSKHKESICFRSQCVLSTTSSTSMATTAVLDV 57

Query: 505  EKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXXXX 684
            EKL +PSFE+H+ SV   RP TYTGA GPP + SF  T+ TE L                
Sbjct: 58   EKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAAAAEAV 117

Query: 685  XXXXXXXXMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPECSSTK 864
                    +AKDAA MV +    +       +   D L  +    +E E         + 
Sbjct: 118  ALARAAAKVAKDAAIMVKNHGSAKTEMKSPGSSATDTLTSKWGLFTEAERAGIVGDYVSD 177

Query: 865  KVESEDEQVVEFSP--SDTEDAVENKLQLLQINDSSEVAVRSGRQTERKXXXXXXXXXXX 1038
            ++E E++ + + S   SD  +    +L+LL+   S  +AVRS RQTERK           
Sbjct: 178  ELELEEDHLEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSHRQTERKAKRTRAAEKAA 237

Query: 1039 XXXXXXXXXXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXXXX 1215
                              LQ+IDYSDP               A+EE+ELS+GI       
Sbjct: 238  TNVVSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQDLLKLE 297

Query: 1216 XXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKNYQ 1395
                   +R G  PTFAQWAAAA +D K+LR+ LNYG +C DKMIKSNIRLVISIAKNYQ
Sbjct: 298  GLHEELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICMDKMIKSNIRLVISIAKNYQ 357

Query: 1396 GAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1569
            GAGMNLQDLVQEGCRGL+RGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 358  GAGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 415


>XP_017977747.1 PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Theobroma
            cacao]
          Length = 579

 Score =  321 bits (823), Expect = 4e-98
 Identities = 191/419 (45%), Positives = 231/419 (55%), Gaps = 13/419 (3%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVHSHLKSRMFLCVRAQCI------STATVA----D 501
            M+CLLPQFKC PDT        H H   H K +  +C R QC+      ST+T A    D
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSH---HSKHKEHICFRTQCVLSTTSSSTSTTATAVLD 57

Query: 502  IEKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXXX 681
            +EKL +PSFE+H  SV   RP TY GA GPP + S   T+ T+ L               
Sbjct: 58   VEKLRLPSFEAHPNSVAVDRPWTYIGATGPPSEASLGATLATDNLLTSDEAIIAAAAAEA 117

Query: 682  XXXXXXXXXMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPECSST 861
                     +AKDAA M  +  + +       +   D+   + +  +E E       S T
Sbjct: 118  VALARAAVKVAKDAALMAENYNYAKTEMKSGVSFATDSFTSKWALFTEAERAGIIGDSPT 177

Query: 862  --KKVESEDEQVVEFSPSDTEDAVENKLQLLQINDSSEVAVRSGRQTERKXXXXXXXXXX 1035
               ++E +D +    + SD  +    +L+ L+   S  +AVRS RQTERK          
Sbjct: 178  DESEMEEDDSEQNSTTESDELEPTNEELERLEEQLSRSIAVRSRRQTERKAKRTRAAEKA 237

Query: 1036 XXXXXXXXXXXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXXX 1212
                               LQ++DYSDP               A+EE+ELS+GI      
Sbjct: 238  AANVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKL 297

Query: 1213 XXXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKNY 1392
                    +R G QPTFAQWAAAAG+D K+LR  LNYG+ CKDKMIKSNIRLVISIAKNY
Sbjct: 298  ERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNY 357

Query: 1393 QGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1569
            QGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 358  QGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 416


>XP_010661180.1 PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
            CBI40014.3 unnamed protein product, partial [Vitis
            vinifera]
          Length = 575

 Score =  321 bits (822), Expect = 4e-98
 Identities = 192/421 (45%), Positives = 231/421 (54%), Gaps = 15/421 (3%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVHSHLKSRMFLCVRAQCI----------STATVAD 501
            M+CLLPQFKC PDT        H  +H   K+R  +  R QC           ST  V D
Sbjct: 1    MSCLLPQFKCPPDTFST-----HPKLHILSKNREAIYFRVQCALSTTSPPLSTSTTAVLD 55

Query: 502  IEKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXXX 681
            IEKL +PS ESH+ SV A RP TY G +GPP + +F+ T+  ETL               
Sbjct: 56   IEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAAEA 115

Query: 682  XXXXXXXXXMAKDAAQMVGSTPFPR----PGNHDDSNHEYDALRLEMSRLSEIESRETPE 849
                     +AKDAA++VG     +    P +    +      R++ +    I       
Sbjct: 116  VALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGDSV 175

Query: 850  CSSTKKVESEDEQVVEFSPSDTEDAVENKLQLLQINDSSEVAVRSGRQTERKXXXXXXXX 1029
             + T  V+    Q V     D E  +E +L+LL+   S  + VRS RQ ERK        
Sbjct: 176  GAETGMVDYNSLQDVTEDSDDLEPTLE-ELELLEAEFSKSIVVRSNRQVERKARRARAAE 234

Query: 1030 XXXXXXXXXXXXXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXX 1206
                                +LQE+DYSDP               A+EE+ELS+GI    
Sbjct: 235  KASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLL 294

Query: 1207 XXXXXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAK 1386
                      +RFG +PTFAQWAAAAG+D K+LR+  NYGI CKDKMIKSNIRLVISIAK
Sbjct: 295  KLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAK 354

Query: 1387 NYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 1566
            NYQGAGMN+QDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRL
Sbjct: 355  NYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 414

Query: 1567 P 1569
            P
Sbjct: 415  P 415


>XP_010943391.1 PREDICTED: RNA polymerase sigma factor sigB-like [Elaeis guineensis]
          Length = 555

 Score =  320 bits (819), Expect = 7e-98
 Identities = 188/410 (45%), Positives = 236/410 (57%), Gaps = 4/410 (0%)
 Frame = +1

Query: 352  MACLLPQFKC---APDTHLASRSPCHYHVHSHLKSRMFLCVRAQCISTATVADIEKLHIP 522
            MACL+PQFKC   + D H  S S   +H   + K+R  +C R+QC+ST T A I+  HI 
Sbjct: 1    MACLVPQFKCPSMSSDAHFRSLS---HHPSLNSKARDSVCFRSQCVSTPTAAVIDMEHIL 57

Query: 523  SFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXXXXXXXXXX 702
            S E+ +TS+ A RPLTY GAIGPP + + + T+ TE L                      
Sbjct: 58   SLEARSTSLAATRPLTYVGAIGPPTKTNMEATLATEALLTGEEAIIAAAAAEAVALARTA 117

Query: 703  XXMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPECSSTKKVESED 882
               AKDAA  + + P  +     D + E D L+LE S  ++ +  E       + +  + 
Sbjct: 118  VEAAKDAALTIANDPSVKLEKSLDFSSEADILQLERSTATDTKPHE-------EHLAKDP 170

Query: 883  EQVVEFSPSDTEDAVENKLQLLQINDSSEVAVRSGRQTER-KXXXXXXXXXXXXXXXXXX 1059
             Q V+ S     + + N+L+  +++ S  +AVRSGRQTER                    
Sbjct: 171  SQDVDIS-----NLIHNELEPQKMHYSGSIAVRSGRQTERIARRARAAERAASSVIPVKS 225

Query: 1060 XXXXXXXXXTLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXXXXXXXXXXTK 1239
                       QEIDYSDP               A+EE+ELS+GI              +
Sbjct: 226  GSSSKKKRSAFQEIDYSDPLRYLRGTTSTSKLLTAAEELELSEGIQDLLKLERLREELEE 285

Query: 1240 RFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQD 1419
            R G+QPT AQWAAAAG+D ++LRK LNYG  CKDKMI SNIRLVISIAKNYQGAGMNLQD
Sbjct: 286  RNGAQPTLAQWAAAAGVDQRTLRKRLNYGTFCKDKMITSNIRLVISIAKNYQGAGMNLQD 345

Query: 1420 LVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1569
            LVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVR+SLS+QSRTIRLP
Sbjct: 346  LVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLP 395


>XP_012070322.1 PREDICTED: RNA polymerase sigma factor sigB [Jatropha curcas]
            XP_012070323.1 PREDICTED: RNA polymerase sigma factor
            sigB [Jatropha curcas] KDP39610.1 hypothetical protein
            JCGZ_02630 [Jatropha curcas]
          Length = 577

 Score =  319 bits (818), Expect = 2e-97
 Identities = 201/430 (46%), Positives = 243/430 (56%), Gaps = 24/430 (5%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVHSHL----KSRMFLCVRAQCISTAT-------VA 498
            M+CLLPQFKC PDT  +     HY  +S+     KSR  +C RAQCI + T       V 
Sbjct: 1    MSCLLPQFKCQPDT-FSIHFRTHYLQNSNFCQSAKSREPVCFRAQCILSTTSPSTSTAVL 59

Query: 499  DIEKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXX 678
            D+EKL +PSFE+H  S+ A  P TY G+IGPP +++F +T+ TETL              
Sbjct: 60   DLEKLRLPSFEAHPDSLVANSPWTYVGSIGPP-KETFGSTLATETLITGDDAVIAAAAAE 118

Query: 679  XXXXXXXXXXMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESR-----ET 843
                      +AKDAA +V S P     +           +LE+  ++++ SR     ET
Sbjct: 119  AVALARAAAKVAKDAAILVKSFPSSEAES-----------KLEIPSIADVSSRWPQFTET 167

Query: 844  PEC-----SSTKKVESEDEQVVEF--SPSDTEDAVENKLQLLQINDSSEVAVRSGRQTER 1002
                    S T +  S +E  ++     SD  +    +L+LLQ   S  +AVRS RQTER
Sbjct: 168  DRARIIGDSVTAETGSREEHPMQHPTKESDHLEPTHEELELLQKQLSEGIAVRSRRQTER 227

Query: 1003 KXXXXXXXXXXXXXXXXXXXXXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIE 1179
            K                             LQE+DYSDP               A+EE+E
Sbjct: 228  KERRTRAAEKAAANVMSWKSGSTSKKKRGPLQEVDYSDPLRYLRGTTSTSKLLTATEELE 287

Query: 1180 LSKGIXXXXXXXXXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSN 1359
            LS+GI              +R G QPTF QWAAAAG+D K+LR  LNYGI CKD+MIKSN
Sbjct: 288  LSEGIQDLLKLERLHEELAERCGGQPTFQQWAAAAGVDQKTLRTRLNYGISCKDRMIKSN 347

Query: 1360 IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSL 1539
            IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSL
Sbjct: 348  IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSL 407

Query: 1540 SDQSRTIRLP 1569
            SDQSRTIRLP
Sbjct: 408  SDQSRTIRLP 417


>KDO49413.1 hypothetical protein CISIN_1g007404mg [Citrus sinensis] KDO49414.1
            hypothetical protein CISIN_1g007404mg [Citrus sinensis]
          Length = 458

 Score =  314 bits (804), Expect = 7e-97
 Identities = 195/430 (45%), Positives = 240/430 (55%), Gaps = 16/430 (3%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVH--SH-LKSRMFLCVRAQCI--------STA--T 492
            M+CLLPQFKC PDT        H H H  SH  KS+  +C R  C+        STA  T
Sbjct: 24   MSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTAMTT 83

Query: 493  VADIEKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXX 672
            V D+EKL +PS E+H+ +V A R  TY GA+GP  +++  T++ TETL            
Sbjct: 84   VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 142

Query: 673  XXXXXXXXXXXXMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPEC 852
                        +AKDAA MV      +P +    +   D      ++L+E E       
Sbjct: 143  AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISSSADTNTSMWAQLTERERASIIGD 202

Query: 853  SSTKKVESEDEQVVE--FSPSDTEDAVENKLQLLQINDSSEVAVRSGRQTERKXXXXXXX 1026
            S   +   E+E   +   + S   +    +L+LL+   S  +AVRS RQTERK       
Sbjct: 203  SVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRAA 262

Query: 1027 XXXXXXXXXXXXXXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXX 1203
                                 ++QE+DYSDP               A+EE++LS GI   
Sbjct: 263  EKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDL 322

Query: 1204 XXXXXXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIA 1383
                      ++R G  PTFAQWAAAAG+D + LR+ LNYGILCKDKMI SNIRLVISIA
Sbjct: 323  LKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISIA 382

Query: 1384 KNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 1563
            KNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIR
Sbjct: 383  KNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 442

Query: 1564 LPLASFRRGH 1593
            LP+ S  RG+
Sbjct: 443  LPVISHGRGN 452


>ERM94758.1 hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  317 bits (813), Expect = 8e-97
 Identities = 186/384 (48%), Positives = 229/384 (59%), Gaps = 7/384 (1%)
 Frame = +1

Query: 439  LKSRMFLCVRAQCIS-TATVA-DIEKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFD 612
            +++R   C + QC+S TATV  D++K+ +PS   H+TSV+   PLTY G IG   +  F+
Sbjct: 26   VRTREATCFQTQCVSSTATVVVDVDKVRVPSLGGHSTSVSTHGPLTYVGTIGSQKKTDFE 85

Query: 613  TTMTTETLFXXXXXXXXXXXXXXXXXXXXXXXMAKDAAQMVGSTPFPRPGNHDDSNHEYD 792
              + TE+L                        +AKDAA MVGS P  R    DD   E D
Sbjct: 86   AALVTESLLKSEEAIIAAAAAEAIALAKAAAKLAKDAALMVGSVPPSRSDKVDDFPSEAD 145

Query: 793  ALRLEMSRLSEIESRETPECSSTKKVESEDEQ--VVEFSPSDTED--AVENKLQLLQIND 960
             LRL+ +RL+E+E   + + SS   +   D+   V + SP++  D  + EN L+ LQ+  
Sbjct: 146  ILRLQRARLTEMERIGSMDGSSIAGIGPRDKHKSVNQLSPNEMADKQSRENILEALQLQH 205

Query: 961  SSEVAVRSGRQTERKXXXXXXXXXXXXXXXXXXXXXXXXXXXT-LQEIDYSDPXXXXXXX 1137
            S  VAVRS RQTER+                             LQEIDYSDP       
Sbjct: 206  SQRVAVRSRRQTERRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYSDPLRYLRGT 265

Query: 1138 XXXXXXXXASEEIELSKGIXXXXXXXXXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHL 1317
                    A+EE+ELS+GI             T+RFG +PTF QWAAAAGID K+LR+ L
Sbjct: 266  TNSTKLLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALRRRL 325

Query: 1318 NYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFST 1497
            +YG  CKDKMIKSNIRLVISIAKNYQG G+++QDLVQEGCRGLVRGAEKFDA+KGFKFST
Sbjct: 326  SYGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFKFST 385

Query: 1498 YAHWWIKQAVRKSLSDQSRTIRLP 1569
            YAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 386  YAHWWIKQAVRKSLSDQSRTIRLP 409


>XP_016755384.1 PREDICTED: RNA polymerase sigma factor sigB-like [Gossypium hirsutum]
          Length = 579

 Score =  317 bits (811), Expect = 2e-96
 Identities = 191/419 (45%), Positives = 231/419 (55%), Gaps = 13/419 (3%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVHSHLKSRMFLCVRAQCI---------STATVADI 504
            M CLLPQFKC PDT        H H   H K +  +C R+QC+         +T  V D+
Sbjct: 1    MPCLLPQFKCQPDTFSIQFRAHHSH---HSKHKESICFRSQCVLSTTSSTSMATTAVLDV 57

Query: 505  EKLHIPSFESHATSVTAIRPLTYTGAIGPPLQKSFDTTMTTETLFXXXXXXXXXXXXXXX 684
            EKL +PSFE+H+ SV   RP TYTGA GPP + SF  T+ TE L                
Sbjct: 58   EKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAAAAAEA 117

Query: 685  XXXXXXXX-MAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRETPECSST 861
                     +AKDAA MV +    +       +   D L  +    +E E         +
Sbjct: 118  VALARAAAKVAKDAAIMVKNHGSAKTEMKSPGSSATDTLTSKWGLFTEAERAGIVGDYVS 177

Query: 862  KKVESEDEQVVEFSP--SDTEDAVENKLQLLQINDSSEVAVRSGRQTERKXXXXXXXXXX 1035
             ++E E++ + + S   SD  +    +L+LL+   S  +AVRS RQTERK          
Sbjct: 178  DELELEEDHLEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSNRQTERKAKRTRAAEKA 237

Query: 1036 XXXXXXXXXXXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKGIXXXXXX 1212
                               LQ+IDYSDP               A+EE+ELS+GI      
Sbjct: 238  ATNVVSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQDLLKL 297

Query: 1213 XXXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLVISIAKNY 1392
                    +R G  PTFAQWAAAA +D K+LR+ LNYG +C DKMIKSNIRLVISIAKNY
Sbjct: 298  EGLHEELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICMDKMIKSNIRLVISIAKNY 357

Query: 1393 QGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1569
            QGAGMNLQDLVQEGCRGL+RGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 358  QGAGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 416


>XP_017977746.1 PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Theobroma
            cacao]
          Length = 586

 Score =  316 bits (810), Expect = 4e-96
 Identities = 192/426 (45%), Positives = 232/426 (54%), Gaps = 20/426 (4%)
 Frame = +1

Query: 352  MACLLPQFKCAPDTHLASRSPCHYHVHSHLKSRMFLCVRAQCI------STATVA----D 501
            M+CLLPQFKC PDT        H H   H K +  +C R QC+      ST+T A    D
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSH---HSKHKEHICFRTQCVLSTTSSSTSTTATAVLD 57

Query: 502  IEKLHIPSFESHATSVTAIRPLTYTGAIGPP-------LQKSFDTTMTTETLFXXXXXXX 660
            +EKL +PSFE+H  SV   RP TY GA GPP       L+ S   T+ T+ L        
Sbjct: 58   VEKLRLPSFEAHPNSVAVDRPWTYIGATGPPSEVSLLRLRASLGATLATDNLLTSDEAII 117

Query: 661  XXXXXXXXXXXXXXXXMAKDAAQMVGSTPFPRPGNHDDSNHEYDALRLEMSRLSEIESRE 840
                            +AKDAA M  +  + +       +   D+   + +  +E E   
Sbjct: 118  AAAAAEAVALARAAVKVAKDAALMAENYNYAKTEMKSGVSFATDSFTSKWALFTEAERAG 177

Query: 841  TPECSST--KKVESEDEQVVEFSPSDTEDAVENKLQLLQINDSSEVAVRSGRQTERKXXX 1014
                S T   ++E +D +    + SD  +    +L+ L+   S  +AVRS RQTERK   
Sbjct: 178  IIGDSPTDESEMEEDDSEQNSTTESDELEPTNEELERLEEQLSRSIAVRSRRQTERKAKR 237

Query: 1015 XXXXXXXXXXXXXXXXXXXXXXXX-TLQEIDYSDPXXXXXXXXXXXXXXXASEEIELSKG 1191
                                      LQ++DYSDP               A+EE+ELS+G
Sbjct: 238  TRAAEKAAANVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEG 297

Query: 1192 IXXXXXXXXXXXXXTKRFGSQPTFAQWAAAAGIDPKSLRKHLNYGILCKDKMIKSNIRLV 1371
            I              +R G QPTFAQWAAAAG+D K+LR  LNYG+ CKDKMIKSNIRLV
Sbjct: 298  IQDLLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLV 357

Query: 1372 ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQS 1551
            ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 358  ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 417

Query: 1552 RTIRLP 1569
            RTIRLP
Sbjct: 418  RTIRLP 423