BLASTX nr result
ID: Akebia27_contig00000352
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00000352
(610 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005847921.1| hypothetical protein CHLNCDRAFT_35273 [Chlor... 151 1e-34
ref|XP_005652306.1| photosystem II protein PsbR, partial [Coccom... 139 5e-31
ref|XP_001696588.1| 10 kDa photosystem II polypeptide [Chlamydom... 129 5e-28
ref|XP_002945815.1| hypothetical protein VOLCADRAFT_109549 [Volv... 128 1e-27
emb|CCC15106.1| 10 kDa photosystem II polypeptide [Lepidodinium ... 126 4e-27
gb|ACF24546.1| photosystem II protein PSII10 [Gymnochlora stellata] 124 2e-26
gb|AAP79212.1| photosystem II protein PSII10 [Bigelowiella natans] 118 2e-24
dbj|BAA78585.1| hypothetical protein [Chlamydomonas sp. HS-5] 117 3e-24
ref|XP_003573520.1| PREDICTED: photosystem II 10 kDa polypeptide... 78 2e-12
ref|XP_002972260.1| hypothetical protein SELMODRAFT_231914 [Sela... 78 2e-12
gb|AHK23268.1| chloroplast photosystem II subunit R [Gossypium h... 77 3e-12
ref|XP_002984174.1| hypothetical protein SELMODRAFT_180828 [Sela... 77 3e-12
sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 10 kDa polyp... 76 7e-12
ref|XP_006344915.1| PREDICTED: photosystem II 10 kDa polypeptide... 76 7e-12
ref|XP_004251952.1| PREDICTED: photosystem II 10 kDa polypeptide... 76 7e-12
ref|XP_002317016.1| polypeptide precursor of photosystem II fami... 76 7e-12
gb|AAO32060.1| photosystem II 10kDa polypeptide, partial [Brassi... 76 9e-12
gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like pr... 76 9e-12
gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza] 76 9e-12
gb|ABL97960.1| photosystem II 10kDa polytpeptide [Brassica rapa] 76 9e-12
>ref|XP_005847921.1| hypothetical protein CHLNCDRAFT_35273 [Chlorella variabilis]
gi|307107577|gb|EFN55819.1| hypothetical protein
CHLNCDRAFT_35273 [Chlorella variabilis]
Length = 144
Score = 151 bits (382), Expect = 1e-34
Identities = 71/113 (62%), Positives = 86/113 (76%)
Frame = +2
Query: 71 SQKAFLGTSLQTQQPKSRQQINTAVQANKGGKKLDIKKQGLSGVKNAVVKANLMGVSEKM 250
+Q A G +L ++R+ +NT V A+ G KK+DI KQGL+ ++N VK NLMG S+ M
Sbjct: 5 TQSACFGKTLPVSGARARKSVNTTVVAS-GAKKIDISKQGLNSIENETVKLNLMGKSKTM 63
Query: 251 NKKGWTDSQGRKGKGFGVYRYANKYGANVDGYSPIYTPDTWSESGSNYTLGTK 409
KGW D QGRKGKG+GVYR+ANKYGANVDGYSPIYTPDTWSESG +Y LGTK
Sbjct: 64 ESKGWVDPQGRKGKGYGVYRFANKYGANVDGYSPIYTPDTWSESGDSYKLGTK 116
>ref|XP_005652306.1| photosystem II protein PsbR, partial [Coccomyxa subellipsoidea
C-169] gi|384254288|gb|EIE27762.1| photosystem II
protein PsbR, partial [Coccomyxa subellipsoidea C-169]
Length = 109
Score = 139 bits (351), Expect = 5e-31
Identities = 62/81 (76%), Positives = 72/81 (88%)
Frame = +2
Query: 167 KLDIKKQGLSGVKNAVVKANLMGVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANVDGY 346
K DIKKQGL +K+ VVKANLMG+S KM+ K WTDSQGRKGKGFGVYR+A+KYGANVDGY
Sbjct: 1 KTDIKKQGLESIKDPVVKANLMGISRKMSDKNWTDSQGRKGKGFGVYRFASKYGANVDGY 60
Query: 347 SPIYTPDTWSESGSNYTLGTK 409
SPIYTPD W+E+G +Y+LGTK
Sbjct: 61 SPIYTPDVWAETGDSYSLGTK 81
>ref|XP_001696588.1| 10 kDa photosystem II polypeptide [Chlamydomonas reinhardtii]
gi|158282813|gb|EDP08565.1| 10 kDa photosystem II
polypeptide [Chlamydomonas reinhardtii]
Length = 121
Score = 129 bits (325), Expect = 5e-28
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +2
Query: 158 GGKKLDIKKQGLSGVKNAVVKANLMGVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANV 337
GG K DI K GL+ +++ VVK NLMG S MNKK W D+ GRKGKG+GVYRY +KYGANV
Sbjct: 10 GGGKTDITKVGLNSIEDPVVKQNLMGKSRFMNKKDWKDASGRKGKGYGVYRYEDKYGANV 69
Query: 338 DGYSPIYTPDTWSESGSNYTLGTK 409
DGYSPIYTPD W+ESG +YTLGTK
Sbjct: 70 DGYSPIYTPDLWTESGDSYTLGTK 93
>ref|XP_002945815.1| hypothetical protein VOLCADRAFT_109549 [Volvox carteri f.
nagariensis] gi|300268630|gb|EFJ52810.1| hypothetical
protein VOLCADRAFT_109549 [Volvox carteri f.
nagariensis]
Length = 141
Score = 128 bits (321), Expect = 1e-27
Identities = 59/84 (70%), Positives = 67/84 (79%)
Frame = +2
Query: 158 GGKKLDIKKQGLSGVKNAVVKANLMGVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANV 337
GG K DI K GL+ +++ VVK NLMG S MN K W DS GRKGKG+GVYRYA+KYGANV
Sbjct: 30 GGGKTDITKVGLNSIEDEVVKMNLMGKSRFMNNKEWKDSSGRKGKGYGVYRYADKYGANV 89
Query: 338 DGYSPIYTPDTWSESGSNYTLGTK 409
DGYSPIYTPD W+ESG +Y LGTK
Sbjct: 90 DGYSPIYTPDLWTESGDSYKLGTK 113
>emb|CCC15106.1| 10 kDa photosystem II polypeptide [Lepidodinium chlorophorum]
Length = 193
Score = 126 bits (317), Expect = 4e-27
Identities = 62/99 (62%), Positives = 73/99 (73%)
Frame = +2
Query: 113 PKSRQQINTAVQANKGGKKLDIKKQGLSGVKNAVVKANLMGVSEKMNKKGWTDSQGRKGK 292
P +RQ + V+ KGGK GLS V++ VVK NL GVS MNKKGW DSQGRKGK
Sbjct: 74 PNTRQLV--IVEGGKGGKV----NTGLSSVEDVVVKNNLEGVSRFMNKKGWVDSQGRKGK 127
Query: 293 GFGVYRYANKYGANVDGYSPIYTPDTWSESGSNYTLGTK 409
GFGVYR+A+KYG N+DGYSPIY PD WSE+G ++LGTK
Sbjct: 128 GFGVYRFASKYGTNIDGYSPIYRPDDWSETGDTFSLGTK 166
>gb|ACF24546.1| photosystem II protein PSII10 [Gymnochlora stellata]
Length = 165
Score = 124 bits (311), Expect = 2e-26
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +2
Query: 164 KKLDIKKQGLSGVKNAVVKANLMGVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANVDG 343
KK+DIK QGL+ + +A ++ANL G S M KGW DSQGRKGKG GVYR+ KYGANVDG
Sbjct: 58 KKVDIKNQGLNSIGDATIQANLQGRSRAMENKGWVDSQGRKGKGLGVYRFEKKYGANVDG 117
Query: 344 YSPIYTPDTWSESGSNYTLGT 406
YSPIYTPD W+ESG++Y LGT
Sbjct: 118 YSPIYTPDIWAESGNSYKLGT 138
>gb|AAP79212.1| photosystem II protein PSII10 [Bigelowiella natans]
Length = 197
Score = 118 bits (295), Expect = 2e-24
Identities = 55/102 (53%), Positives = 71/102 (69%)
Frame = +2
Query: 101 QTQQPKSRQQINTAVQANKGGKKLDIKKQGLSGVKNAVVKANLMGVSEKMNKKGWTDSQG 280
+T+ SR +N V K++DIKK+GL + + ++ NL G S M+ K W D QG
Sbjct: 75 RTRAAPSRTAVNFKV------KQVDIKKKGLESISDETIQQNLQGRSRAMSDKNWVDPQG 128
Query: 281 RKGKGFGVYRYANKYGANVDGYSPIYTPDTWSESGSNYTLGT 406
RKG+G+GVYR+ KYGANVDGYSPIYTPD WSESG++Y LGT
Sbjct: 129 RKGRGYGVYRFQKKYGANVDGYSPIYTPDIWSESGNSYKLGT 170
>dbj|BAA78585.1| hypothetical protein [Chlamydomonas sp. HS-5]
Length = 128
Score = 117 bits (293), Expect = 3e-24
Identities = 53/84 (63%), Positives = 63/84 (75%)
Frame = +2
Query: 158 GGKKLDIKKQGLSGVKNAVVKANLMGVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANV 337
GG K+DI K GL G+ + V+ NL G S M K W D QGRKGKG+GVYR+ +KYGANV
Sbjct: 17 GGGKVDITKAGLEGIDDPTVQQNLKGRSRYMKDKNWVDPQGRKGKGYGVYRFEDKYGANV 76
Query: 338 DGYSPIYTPDTWSESGSNYTLGTK 409
DGYSPIYT D W+ESG++Y LGTK
Sbjct: 77 DGYSPIYTADQWTESGASYKLGTK 100
>ref|XP_003573520.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357145092|ref|XP_003573521.1| PREDICTED: photosystem
II 10 kDa polypeptide, chloroplastic-like isoform 2
[Brachypodium distachyon]
gi|357145094|ref|XP_003573522.1| PREDICTED: photosystem
II 10 kDa polypeptide, chloroplastic-like isoform 3
[Brachypodium distachyon]
Length = 127
Score = 78.2 bits (191), Expect = 2e-12
Identities = 50/119 (42%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +2
Query: 53 MTATVTSQKAFLGTSLQTQQPKSRQQINTAVQANKGGKKLDIKKQ-GLSGVKNAVVKANL 229
M A++ + TSL + SR+ N AV + GGKK+ + K G+ G + AN
Sbjct: 1 MAASMITSPLVAPTSLPSL---SRRGSNFAVVCS-GGKKIKVDKPLGIGGGLTVDIDAN- 55
Query: 230 MGVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANVDGYSPIYTPDTWSESGSNYTLGT 406
GRKG G GVY++ +KYGANVDGYSPIYTP+ WSESG Y GT
Sbjct: 56 ----------------GRKGTGKGVYQFVDKYGANVDGYSPIYTPEVWSESGDRYAGGT 98
>ref|XP_002972260.1| hypothetical protein SELMODRAFT_231914 [Selaginella moellendorffii]
gi|300159727|gb|EFJ26346.1| hypothetical protein
SELMODRAFT_231914 [Selaginella moellendorffii]
Length = 135
Score = 78.2 bits (191), Expect = 2e-12
Identities = 48/118 (40%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Frame = +2
Query: 59 ATVTSQKAFLGTSLQTQQPKSR--QQINTAVQAN-KGGKKLDIKKQGLSGVKNAVVKANL 229
A V + AF G+SL +R ++T + +GGKK+ K
Sbjct: 2 AAVLERSAFCGSSLARAPVAARGLPALSTRLTVTARGGKKISTKAP-------------- 47
Query: 230 MGVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANVDGYSPIYTPDTWSESGSNYTLG 403
+G S ++ K D+ GR KG GVY++ KYGANVDGYSPIYTPD WS SG YT G
Sbjct: 48 LGPSGDLSFKSGLDASGRGTKGKGVYQFTKKYGANVDGYSPIYTPDEWSPSGDVYTGG 105
>gb|AHK23268.1| chloroplast photosystem II subunit R [Gossypium hirsutum]
Length = 139
Score = 77.4 bits (189), Expect = 3e-12
Identities = 48/125 (38%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Frame = +2
Query: 53 MTATVTSQKAFLGTSLQTQQPK-------SRQQINTAVQANKGGKKLDIKKQGLSGVKNA 211
M A+V + L S ++P +R + V+A+ GGKK+ K
Sbjct: 1 MAASVMASSVTLKPSFNVEKPGVRGVPSLARSPSSFKVEAS-GGKKIKTDKP-------- 51
Query: 212 VVKANLMGVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANVDGYSPIYTPDTWSESGSN 391
G++ MN + D+ GRKGKG GVY+Y +KYGANVDGYSPIY + WS SG
Sbjct: 52 ------YGINGGMNLRDGLDASGRKGKGKGVYQYVDKYGANVDGYSPIYNTNDWSPSGDV 105
Query: 392 YTLGT 406
Y GT
Sbjct: 106 YVGGT 110
>ref|XP_002984174.1| hypothetical protein SELMODRAFT_180828 [Selaginella moellendorffii]
gi|300148023|gb|EFJ14684.1| hypothetical protein
SELMODRAFT_180828 [Selaginella moellendorffii]
Length = 135
Score = 77.4 bits (189), Expect = 3e-12
Identities = 49/119 (41%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Frame = +2
Query: 59 ATVTSQKAFLGTSLQTQQPKSRQ----QINTAVQANKGGKKLDIKKQGLSGVKNAVVKAN 226
A V + AF G+SL +R I V A+ GGKK+ K
Sbjct: 2 AAVLERSAFCGSSLARAPVAARGLPALSIRLTVTAS-GGKKISTKTP------------- 47
Query: 227 LMGVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANVDGYSPIYTPDTWSESGSNYTLG 403
+G S + K D+ GR KG GVY++ KYGANVDGYSPIYTPD WS SG Y+ G
Sbjct: 48 -LGPSGDLTFKSGVDASGRGAKGKGVYQFTKKYGANVDGYSPIYTPDEWSPSGDVYSGG 105
>sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor gi|967968|gb|AAA74957.1| photosystem II
10kDa polypeptide [Brassica rapa subsp. oleifera]
Length = 141
Score = 76.3 bits (186), Expect = 7e-12
Identities = 37/70 (52%), Positives = 46/70 (65%)
Frame = +2
Query: 194 SGVKNAVVKANLMGVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANVDGYSPIYTPDTW 373
SGVK + GV+ M+ + D+ GRKGKG+GVY++ +KYGANVDGYSPIY D W
Sbjct: 43 SGVKK-IKTDKPFGVNGSMDLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEW 101
Query: 374 SESGSNYTLG 403
S SG Y G
Sbjct: 102 SASGDVYKGG 111
>ref|XP_006344915.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform X1 [Solanum tuberosum]
Length = 137
Score = 76.3 bits (186), Expect = 7e-12
Identities = 42/93 (45%), Positives = 52/93 (55%)
Frame = +2
Query: 128 QINTAVQANKGGKKLDIKKQGLSGVKNAVVKANLMGVSEKMNKKGWTDSQGRKGKGFGVY 307
++ A A KL +K G G K K G++ +N + D+ GRK KG GVY
Sbjct: 20 RVEKASIARPSNSKLIVKASG--GKKITTNKP--YGINGGLNLQDGVDASGRKAKGKGVY 75
Query: 308 RYANKYGANVDGYSPIYTPDTWSESGSNYTLGT 406
++ KYGANVDGYSPIY PD WS SG Y GT
Sbjct: 76 QFVKKYGANVDGYSPIYNPDEWSPSGDVYVGGT 108
>ref|XP_004251952.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 2 [Solanum lycopersicum]
Length = 137
Score = 76.3 bits (186), Expect = 7e-12
Identities = 44/124 (35%), Positives = 63/124 (50%)
Frame = +2
Query: 35 STTGNMMTATVTSQKAFLGTSLQTQQPKSRQQINTAVQANKGGKKLDIKKQGLSGVKNAV 214
S++G MM ++ + + + L + S ++ + GGKK+ K
Sbjct: 2 SSSGVMMMSSFSLKPSLLSVEKASIARPSNSKL---IVKASGGKKITTDKP--------- 49
Query: 215 VKANLMGVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANVDGYSPIYTPDTWSESGSNY 394
G++ +N + D+ GRK KG GVY++ KYGANVDGYSPIY PD WS SG Y
Sbjct: 50 -----YGINGGLNLQDGVDASGRKAKGKGVYQFVKKYGANVDGYSPIYNPDEWSPSGDVY 104
Query: 395 TLGT 406
GT
Sbjct: 105 VGGT 108
>ref|XP_002317016.1| polypeptide precursor of photosystem II family protein [Populus
trichocarpa] gi|566195486|ref|XP_006377856.1|
hypothetical protein POPTR_0011s14550g [Populus
trichocarpa] gi|118483083|gb|ABK93451.1| unknown
[Populus trichocarpa] gi|222860081|gb|EEE97628.1|
polypeptide precursor of photosystem II family protein
[Populus trichocarpa] gi|550328392|gb|ERP55653.1|
hypothetical protein POPTR_0011s14550g [Populus
trichocarpa]
Length = 137
Score = 76.3 bits (186), Expect = 7e-12
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = +2
Query: 233 GVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANVDGYSPIYTPDTWSESGSNYTLGT 406
G++ M+ +G D+ GRKGKG GVY++ +KYGANVDGYSPIY P WS SG Y GT
Sbjct: 51 GINGGMDLRGGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDPKDWSPSGEVYVGGT 108
>gb|AAO32060.1| photosystem II 10kDa polypeptide, partial [Brassica rapa subsp.
pekinensis]
Length = 137
Score = 75.9 bits (185), Expect = 9e-12
Identities = 37/70 (52%), Positives = 46/70 (65%)
Frame = +2
Query: 194 SGVKNAVVKANLMGVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANVDGYSPIYTPDTW 373
SGVK + GV+ M+ + D+ GRKGKG+GVY++ +KYGANVDGYSPIY D W
Sbjct: 39 SGVKK-IKTDKPFGVNGSMDLRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEW 97
Query: 374 SESGSNYTLG 403
S SG Y G
Sbjct: 98 SASGDVYKGG 107
>gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
arrhiza] gi|339716046|gb|AEJ88270.1| putative
chloroplast photosystem II 10 kDa protein [Wolffia
arrhiza]
Length = 138
Score = 75.9 bits (185), Expect = 9e-12
Identities = 45/117 (38%), Positives = 58/117 (49%)
Frame = +2
Query: 53 MTATVTSQKAFLGTSLQTQQPKSRQQINTAVQANKGGKKLDIKKQGLSGVKNAVVKANLM 232
MT++V S SL+ +R + + L +K G +K
Sbjct: 1 MTSSVISS-----LSLKPSPISARSPVKGLPSLARPASALTVKASGGKKIKTDTP----F 51
Query: 233 GVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANVDGYSPIYTPDTWSESGSNYTLG 403
G M K D+ GRKGKG GVY++ +KYGANVDGYSPIY+PD WS SG Y G
Sbjct: 52 GTGGGMKLKDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGG 108
>gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]
Length = 138
Score = 75.9 bits (185), Expect = 9e-12
Identities = 41/103 (39%), Positives = 53/103 (51%)
Frame = +2
Query: 95 SLQTQQPKSRQQINTAVQANKGGKKLDIKKQGLSGVKNAVVKANLMGVSEKMNKKGWTDS 274
SL+ +R + + L +K G +K G+ M K D+
Sbjct: 10 SLKPSPISARSPVKGLPSLARPASGLTVKASGGKKIKTDTP----FGIGGGMKLKDGLDA 65
Query: 275 QGRKGKGFGVYRYANKYGANVDGYSPIYTPDTWSESGSNYTLG 403
GRKGKG GVY++ +KYGANVDGYSPIY+PD WS SG Y G
Sbjct: 66 SGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGG 108
>gb|ABL97960.1| photosystem II 10kDa polytpeptide [Brassica rapa]
Length = 140
Score = 75.9 bits (185), Expect = 9e-12
Identities = 37/70 (52%), Positives = 46/70 (65%)
Frame = +2
Query: 194 SGVKNAVVKANLMGVSEKMNKKGWTDSQGRKGKGFGVYRYANKYGANVDGYSPIYTPDTW 373
SGVK + GV+ M+ + D+ GRKGKG+GVY++ +KYGANVDGYSPIY D W
Sbjct: 42 SGVKK-IKTDKPFGVNGSMDLRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEW 100
Query: 374 SESGSNYTLG 403
S SG Y G
Sbjct: 101 SASGDVYKGG 110