BLASTX nr result

ID: Akebia26_contig00034574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00034574
         (378 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006476151.1| PREDICTED: DNA polymerase theta-like isoform...    60   4e-07
ref|XP_006450613.1| hypothetical protein CICLE_v100072282mg, par...    59   5e-07

>ref|XP_006476151.1| PREDICTED: DNA polymerase theta-like isoform X1 [Citrus sinensis]
           gi|568844552|ref|XP_006476152.1| PREDICTED: DNA
           polymerase theta-like isoform X2 [Citrus sinensis]
          Length = 2191

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 47/125 (37%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
 Frame = -3

Query: 367 GVGCSSGFTNHKSSQPPSFLSRC---STAETKGHTSEGKLKSSFIISPNMDPNVPCSTGV 197
           GV    G   HKS Q   F  +C   +T+ T+G  S+ + K S +I              
Sbjct: 411 GVVSEKGSVTHKSCQKIKF--KCHHDNTSRTEG-ISDVQEKDSVLI-------------- 453

Query: 196 EEIHQAQEMDPISVAAESNTSSVQEKDVRSPCVSHQKYNEAGTPSSSLFLKDSLQLSSWL 17
             +H+ +++D  S   +S TS      ++ P V ++K +EAGTPSSS  LKD L LSSWL
Sbjct: 454 --VHE-RKLDISSQGIDSITSDSPTNVIKKP-VGNEKSDEAGTPSSSGMLKDCLDLSSWL 509

Query: 16  PSEIC 2
           PSEIC
Sbjct: 510 PSEIC 514


>ref|XP_006450613.1| hypothetical protein CICLE_v100072282mg, partial [Citrus
           clementina] gi|557553839|gb|ESR63853.1| hypothetical
           protein CICLE_v100072282mg, partial [Citrus clementina]
          Length = 1810

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 47/125 (37%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
 Frame = -3

Query: 367 GVGCSSGFTNHKSSQPPSFLSRC---STAETKGHTSEGKLKSSFIISPNMDPNVPCSTGV 197
           GV    G   HKS Q   F  +C   +T+ T+G  S+ + K S +I              
Sbjct: 411 GVVSEKGSVTHKSCQKIKF--KCHHDNTSRTEG-ISDVQEKDSVLI-------------- 453

Query: 196 EEIHQAQEMDPISVAAESNTSSVQEKDVRSPCVSHQKYNEAGTPSSSLFLKDSLQLSSWL 17
             +H+ +++D  S   +S TS      ++ P V ++K +EAGTPSSS  LKD L LSSWL
Sbjct: 454 --VHE-RKLDISSQGIDSITSDSPTNVIKKP-VGNKKSDEAGTPSSSGMLKDCLDLSSWL 509

Query: 16  PSEIC 2
           PSEIC
Sbjct: 510 PSEIC 514


Top