BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00020214
         (3093 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...   829   0.0  
ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prun...   720   0.0  
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp...   718   0.0  
gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitat...   714   0.0  
ref|XP_007033217.1| maize chloroplast splicing factor CRS1, puta...   711   0.0  
ref|XP_007033218.1| maize chloroplast splicing factor CRS1, puta...   707   0.0  
ref|XP_007033220.1| maize chloroplast splicing factor CRS1, puta...   704   0.0  
ref|XP_007033219.1| maize chloroplast splicing factor CRS1, puta...   704   0.0  
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...   695   0.0  
ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citr...   687   0.0  
ref|XP_007033221.1| maize chloroplast splicing factor CRS1, puta...   681   0.0  
ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron sp...   677   0.0  
ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron sp...   674   0.0  
ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron sp...   673   0.0  
ref|XP_006842364.1| hypothetical protein AMTR_s00079p00185530 [A...   672   0.0  
ref|XP_007139175.1| hypothetical protein PHAVU_008G007700g [Phas...   665   0.0  
ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron sp...   662   0.0  
ref|XP_002306656.2| hypothetical protein POPTR_0005s15420g [Popu...   662   0.0  
ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron sp...   659   0.0  
ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron sp...   640   e-180

>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score =  829 bits (2142), Expect = 0.0
 Identities = 450/770 (58%), Positives = 550/770 (71%), Gaps = 27/770 (3%)
 Frame = -3

Query: 2794 TDETLKMPTAPWMKGPLLLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQ 2615
            TD  +KMPTAPWMKGPLLL  +EVLDLS+ +  K +      EK DR+L +KVSGGRG +
Sbjct: 69   TDAAIKMPTAPWMKGPLLLQPNEVLDLSKARP-KKVAGSAGAEKPDRSLTEKVSGGRGAK 127

Query: 2614 AMRKIVESITKLQEFHXXXXXXXXXXXXXFRVPLERVCEDVDSELEARVPWAARVERIVF 2435
            AM+KI++SI KLQE H             F V LE +  D +S +  ++PW  + E++VF
Sbjct: 128  AMKKIMQSIVKLQETHTSDETQENTEEFEFGVSLEGIGGDENSRIGGKMPWL-KTEKVVF 186

Query: 2434 GRMKKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNELA 2255
             R KKEKVVT AEL+L    L RLR +A KM +WVKVKKAGVT+ VVD+I  VW+ +ELA
Sbjct: 187  RRTKKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELA 246

Query: 2254 MLKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRHASS 2075
            M+KFD+PLCRNMDRA+EI+EIKT GLV+WSKK++LVVYRG NY  TSK F K+     + 
Sbjct: 247  MVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAG 306

Query: 2074 VETFLSEVHLVKTEDNIAISNI-------GTKEIIVDGQNRVEDSLPT--FVEENLALQS 1922
             +   S+++    ED++ IS I       G K    DG+   EDS PT  F+EE +  Q 
Sbjct: 307  ADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGE---EDSSPTGIFMEEMVDSQP 363

Query: 1921 VNGTLYEREADRLLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLT 1742
            VNG+LYEREADRLLDGLGPRF+DWW PKPLPVDADLLPEV+ GFR P R  PP  R  LT
Sbjct: 364  VNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLT 423

Query: 1741 NDELTYLRKLARPLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMA 1562
            +DELTYLRKLA  LPTHFVLGRN KLQGLA+AI+KLWEKSLIVKIA+KWGIPNT NEQMA
Sbjct: 424  DDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMA 483

Query: 1561 WELK------------------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIES 1436
             ELK                  RGKDFLP  VANL+V+RE E K CQ+ EE AR KAIE+
Sbjct: 484  NELKCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQIREEDARLKAIET 543

Query: 1435 FFVTDETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKL 1256
             FVTD+ + NTST GT SEFQ+I+T++ GL  +GNT+I+V+  AEKE LEKEL+KQER L
Sbjct: 544  SFVTDKPLANTSTTGTLSEFQNIETEFRGL-KDGNTEIEVELEAEKERLEKELKKQERNL 602

Query: 1255 FLLKLKIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVF 1076
            F+LK KIERSAK L+KLNS WRPA+  AD+EMITEEER+CF KIG KMD +L+LGRRGVF
Sbjct: 603  FILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVF 662

Query: 1075 DGVIESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYR 896
            DGVIE +HQHWKHRE+VKVITMQR +SQV+ T               +KL++GHAI++YR
Sbjct: 663  DGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYR 722

Query: 895  GKNYRRPLKLLPGNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKLRHLLRRNE 716
            GKNYRRP+KL+P NLLTKREAL RSL MQRIGSLKFFAYQRQ+ ISDL+ KL  L + + 
Sbjct: 723  GKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKLADLQKGSR 782

Query: 715  EATRRESENP*RQK*QDLLRQETSF*F*WKRYVHYPMKQISTYLRNSTSY 566
               +RESE   + +  D+   E+ F    +  + + + Q+   L+ +  Y
Sbjct: 783  RIDQRESEKFTKHEPPDVAYHESYFQGVKRYNIPHVLLQLLLRLKKTAEY 832


>ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prunus persica]
            gi|462413463|gb|EMJ18512.1| hypothetical protein
            PRUPE_ppa016241mg [Prunus persica]
          Length = 809

 Score =  720 bits (1858), Expect = 0.0
 Identities = 401/736 (54%), Positives = 497/736 (67%), Gaps = 47/736 (6%)
 Frame = -3

Query: 2794 TDETLKMPTAPWMKGPLLLPSSEVLDLS--RIKKTKNIRKVDYDEKIDRNLNDKVSGGRG 2621
            TD  +K PTAPWMKGPLLL   EV+D S  R KKT N  K    EK D  L  K+ G RG
Sbjct: 81   TDACIKAPTAPWMKGPLLLQPHEVIDFSKPRNKKTHNNAKA---EKPDTVLAGKLVGIRG 137

Query: 2620 KQAMRKIVESITKLQ-------------EFHXXXXXXXXXXXXXFRVP------------ 2516
             +A+++IV+SI +L              EF              +               
Sbjct: 138  DKAIKQIVQSIERLGPNQKTDETQKGFGEFRIWDSLEGLGQNEKWDETHKDFVEFGIGGC 197

Query: 2515 LERVCEDVDSELEARVPWAARVERIVFGRMKKEKVVTKAELSLPETDLRRLRSDAAKMTQ 2336
            LE + +  DS    ++PW  R ERIVF R+KK++V + AELSL +  L RLR++AAKM +
Sbjct: 198  LEGLGKAADSRFGGKMPWE-RDERIVFQRIKKKRVASAAELSLEKELLERLRAEAAKMRK 256

Query: 2335 WVKVKKAGVTQVVVDEIRKVWRKNELAMLKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKE 2156
            WVKVKKAGVTQ +VD+I+ +W+ NELAM+KFD+PLCRNM RAQEI+E KTGG+VVW KK+
Sbjct: 257  WVKVKKAGVTQAIVDDIKFIWKTNELAMVKFDVPLCRNMHRAQEIVETKTGGMVVWGKKD 316

Query: 2155 SLVVYRGCNYDLTSKAFPKLHSRHASSVETFLSEVHLVKTEDNIAISNIGTKEIIVDGQN 1976
            +LV+YRGCNY  +SK FPK+    A   ET  S+      E+N +      +  + +  +
Sbjct: 317  TLVIYRGCNYQSSSKFFPKMRPCSADRQETLSSDHMQPDLEENSSYQYKSFESPVDEKMS 376

Query: 1975 RV---EDSLP--TFVEENLALQSVNGTLYEREADRLLDGLGPRFVDWWYPKPLPVDADLL 1811
            R    ED +   TF E +++ Q  + +LYE+EADRLLDGLGPRF+DWW  KPLPVDADLL
Sbjct: 377  RKDAEEDCIQSGTFQETSMSCQPTSRSLYEKEADRLLDGLGPRFIDWWMHKPLPVDADLL 436

Query: 1810 PEVVRGFRTPLRRCPPHVRPTLTNDELTYLRKLARPLPTHFVLGRNTKLQGLASAIIKLW 1631
            PEVV GF+ P+RRCPPH R  LT+DELT+LRK AR LPTHFVLGRN KLQGLA+AI+KLW
Sbjct: 437  PEVVPGFKAPIRRCPPHTRSKLTDDELTFLRKFARSLPTHFVLGRNRKLQGLAAAILKLW 496

Query: 1630 EKSLIVKIAVKWGIPNTNNEQMAWELK---------------RGKDFLPSTVANLVVDRE 1496
            EKSLI KIAVK+G+PNTNNEQMA+EL+               RGKDFLP  VA+LV  RE
Sbjct: 497  EKSLIAKIAVKFGVPNTNNEQMAYELRARVLILRNKFIILLYRGKDFLPCGVADLVAKRE 556

Query: 1495 KELKRCQLHEERARWKAIESFFVTDETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDV 1316
             EL R QL+EE AR KAIE+F  + E + N  TVGT SEFQDIQT+Y  L    N  +++
Sbjct: 557  VELTRWQLYEEHARQKAIETFCESGEPLVN--TVGTLSEFQDIQTEYGELIKE-NKNVEI 613

Query: 1315 QFLAEKEGLEKELRKQERKLFLLKLKIERSAKELSKLNSEWRPAEESADQEMITEEERQC 1136
            +  AEKE LE+ELR QERK F+L  KIE+S  ELSKLNS+  PAE+  DQEM+TEEE++C
Sbjct: 614  KLEAEKEQLERELRNQERKFFILNKKIEKSTNELSKLNSQRTPAEQDVDQEMMTEEEKEC 673

Query: 1135 FHKIGLKMDKTLVLGRRGVFDGVIESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXX 956
               +GLKM   LVLGRRGVF+GV+E +HQHWKHREVVKVITMQ+++ QV+ T        
Sbjct: 674  LRTVGLKMHSCLVLGRRGVFNGVMEGLHQHWKHREVVKVITMQKLFRQVMHTAKLLEAES 733

Query: 955  XXXXXXXEKLQKGHAIVLYRGKNYRRPLKLLPGNLLTKREALQRSLGMQRIGSLKFFAYQ 776
                   +KL++GHAI++YRGKNYRRPL    GNLL+KR+AL RSL MQRIGSLKFFA Q
Sbjct: 734  GGILVSVDKLKEGHAIIIYRGKNYRRPLMPTGGNLLSKRKALHRSLEMQRIGSLKFFASQ 793

Query: 775  RQRMISDLQRKLRHLL 728
            RQ+   DL+ KL H L
Sbjct: 794  RQQATLDLKLKLSHFL 809


>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857343|ref|XP_006482226.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 771

 Score =  718 bits (1853), Expect = 0.0
 Identities = 398/712 (55%), Positives = 494/712 (69%), Gaps = 29/712 (4%)
 Frame = -3

Query: 2779 KMPTAPWMKGPLLLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAMRKI 2600
            KMPTAPWM+ P++L   E++  S+ K  K+ +K D      + L  K SG RGKQAM+KI
Sbjct: 54   KMPTAPWMRSPIVLQPDEIIKPSKPKTKKSFKKTD------KGLTAKESGVRGKQAMKKI 107

Query: 2599 VESITKLQEFHXXXXXXXXXXXXXFRVPL--ERVC--EDVDSELEARVPWAARVERIVFG 2432
            +E+I KLQ+                      E V   ED+      +VPW  R +R VF 
Sbjct: 108  IENIEKLQKDQILDETQKKVMEKFEFKGCFEENVSHEEDLRGGFGGKVPWL-REDRFVFR 166

Query: 2431 RMKKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNELAM 2252
            RMKKE++VTKAE  L    L RL+ +A KM +WVKVKKAGVT+ VV EIR  WR+NELAM
Sbjct: 167  RMKKERMVTKAETMLDGELLERLKDEARKMRKWVKVKKAGVTESVVFEIRLAWRRNELAM 226

Query: 2251 LKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRHASSV 2072
            +KFD+PLCRNMDRA+EI+E+KTGGLV+W+KK++ VVYRG +    SK+  K+  R A   
Sbjct: 227  VKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRGDS----SKSSVKMCPRSADDQ 282

Query: 2071 ETFLSEVHLVKTEDNIAISNIGTKEIIVDGQNRV-----EDSLPT--FVEENLALQSVNG 1913
            E  LS+   +  E  + +S I +    +D QNR      E+SLPT  F+++NL +     
Sbjct: 283  EAPLSKSTHLHLEKKVNVSWIKSNTATLD-QNRSLKDGEENSLPTSIFMDKNLRIDK--- 338

Query: 1912 TLYEREADRLLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLTNDE 1733
            +LYERE DRLLDGLGPRFVDWW  KPLPVD DLLPEVV GF+ P R  PP  R  LT+DE
Sbjct: 339  SLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPFRLSPPDARSKLTDDE 398

Query: 1732 LTYLRKLARPLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMAWEL 1553
            LTYLRKLA PLPTHFVLGRN  LQGLA+AI+KLWEKSL+ KI VKWGIPNT+NEQMA EL
Sbjct: 399  LTYLRKLAHPLPTHFVLGRNRGLQGLATAILKLWEKSLVAKITVKWGIPNTDNEQMANEL 458

Query: 1552 K------------------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIESFFV 1427
            K                  RG DFLP  V NL+V+RE+EL+ CQ HEE AR KAIE+F +
Sbjct: 459  KHLTGGVLLLRNKFLIILYRGNDFLPCGVENLIVERERELQICQNHEEGARLKAIETFHL 518

Query: 1426 TDETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKLFLL 1247
              E +E TS  GT SEFQ+IQ+  +G    GN + ++Q  AE E LE+ELRKQERKLF+L
Sbjct: 519  PHEPLEKTSKAGTLSEFQNIQSD-FGDLKMGNREFELQLEAEIEDLERELRKQERKLFIL 577

Query: 1246 KLKIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVFDGV 1067
             +KIE+SAKELS+LNS W+P E+  D EMITEEERQC HKIG+KM+  L+LGRRGVFDGV
Sbjct: 578  NIKIEKSAKELSRLNSAWKPREQDPDLEMITEEERQCLHKIGMKMNSNLLLGRRGVFDGV 637

Query: 1066 IESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYRGKN 887
            IE +HQHWK+REV +VIT Q++++QVI T               +KL++GHAI++YRGKN
Sbjct: 638  IEGLHQHWKYREVARVITKQKLFAQVIYTAKSLVAESGGILISVDKLKEGHAIIIYRGKN 697

Query: 886  YRRPLKLLPGNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKLRHL 731
            YRRPLKL+  NLL+KR+AL+RSL MQR+GSLKFFAYQRQR+IS+L+ KL  L
Sbjct: 698  YRRPLKLMTQNLLSKRQALRRSLEMQRLGSLKFFAYQRQRVISNLKIKLAEL 749


>gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 828

 Score =  714 bits (1844), Expect = 0.0
 Identities = 388/712 (54%), Positives = 479/712 (67%), Gaps = 29/712 (4%)
 Frame = -3

Query: 2788 ETLKMPTAPWMKGPLLLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAM 2609
            E +KMPT PWMKGPL+L   EV DLS+ +          ++ ++  L DK+ G RGK  +
Sbjct: 60   EPIKMPTPPWMKGPLVLQPHEVTDLSKPENDNKFSNRKAEKSVN-GLTDKLVGRRGKNVI 118

Query: 2608 RKI---VESITKLQEFHXXXXXXXXXXXXXFRVPLERVCEDVDSELEARVPWAARVERIV 2438
            +KI   +E + +  +                   LE + E        R+PW  + E  V
Sbjct: 119  KKIARRIEELGRKSKVDSEETQKDFVGKNGIGDCLEGLGESRSGG--ERMPWE-KDEGFV 175

Query: 2437 FGRMKKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNEL 2258
            F RMKKEK+V+ AEL L    L RLRS+A KM +WVKVKKAGVT+ VV++++ VW+ NEL
Sbjct: 176  FRRMKKEKIVSSAELRLERELLERLRSEARKMRKWVKVKKAGVTKEVVEDVKFVWKSNEL 235

Query: 2257 AMLKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRHAS 2078
            AM+KFD+PLCRNMDRAQEI+E+KTGGLVVW +K++ V+YRGCNY  TSK FP+ ++  + 
Sbjct: 236  AMVKFDVPLCRNMDRAQEILEMKTGGLVVWRRKDAQVIYRGCNYQPTSKTFPRTYAGFSG 295

Query: 2077 SVETFLSEVHLVKTEDNIAISNI----GTKEIIVDGQNRVEDSLPT-FVEENLALQSVNG 1913
              ET  S +  + +    ++S +     T E  +  +N   +++PT  + +N A    + 
Sbjct: 296  HQETPFSNLVQLDSRKGNSVSEVKSYENTIERKISKKNTEGETIPTAIILKNDANFQPSS 355

Query: 1912 TLYEREADRLLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLTNDE 1733
            +LY READRLLDGLGPRF+DWW  KPLPVDADLLPEVV GFR P RRCPPH R  LT++E
Sbjct: 356  SLYVREADRLLDGLGPRFIDWWMNKPLPVDADLLPEVVPGFRPPFRRCPPHTRSKLTDEE 415

Query: 1732 LTYLRKLARPLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMAWEL 1553
            LTYLRKLA  LPTHFVLGRN KLQGLA+AI+KLWEK  I KIAVK G+PNTNNEQMA+EL
Sbjct: 416  LTYLRKLAHSLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIAVKLGVPNTNNEQMAYEL 475

Query: 1552 K---------------------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIES 1436
            K                     RGKDFLP  +A L+  RE EL+ CQL+EE AR    E 
Sbjct: 476  KARICLTGGDLLLRNKFIIILYRGKDFLPDQIAELITKRETELEYCQLYEEHARLVVAEK 535

Query: 1435 FFVTDETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKL 1256
             FV DE ++ TS  GT SEF DIQ + YG  N GN ++ + F AEKE LE ELRKQERKL
Sbjct: 536  VFVADEPLKKTSPAGTLSEFHDIQIE-YGDSNKGNIEVKLPFEAEKERLESELRKQERKL 594

Query: 1255 FLLKLKIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVF 1076
             +L  KI++S KEL KLN+ W+P+E   DQEM+TEEER+CF KIGLKM   LVLGRRG+F
Sbjct: 595  LILNSKIKKSTKELLKLNTAWKPSERDGDQEMLTEEERECFRKIGLKMRSVLVLGRRGIF 654

Query: 1075 DGVIESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYR 896
            DGVIE + QHWKHREV KVITMQR + QV+ T               EKL++GHAI++YR
Sbjct: 655  DGVIEGLRQHWKHREVAKVITMQRYFWQVMYTATSLEAESGGLLVSVEKLKEGHAIIIYR 714

Query: 895  GKNYRRPLKLLPGNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKL 740
            GKNYRRPLKL+  NLLTKR+AL RSL MQRIGSLKFFAYQR R ISDL+ KL
Sbjct: 715  GKNYRRPLKLISVNLLTKRKALSRSLEMQRIGSLKFFAYQRHRAISDLKLKL 766


>ref|XP_007033217.1| maize chloroplast splicing factor CRS1, putative isoform 1 [Theobroma
            cacao] gi|508712246|gb|EOY04143.1| maize chloroplast
            splicing factor CRS1, putative isoform 1 [Theobroma
            cacao]
          Length = 818

 Score =  711 bits (1835), Expect = 0.0
 Identities = 392/726 (53%), Positives = 504/726 (69%), Gaps = 29/726 (3%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRI--KKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAM 2609
            +KMPTAPWMKGPLLL   EVL+ S+   KK+ N +     +  D+ L  K SG RGK+ M
Sbjct: 88   IKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKA----KAPDKALFGKESGVRGKKVM 143

Query: 2608 RKIVESITKLQEFHXXXXXXXXXXXXXFRVP--LERVCEDVD-SELEARVPWAARVERIV 2438
            +KI+ ++  LQ  +             F V   LE    D +    + ++PW    E++V
Sbjct: 144  KKIIRNVEMLQG-NEVLEDTQIGIREEFEVGNWLEEFGSDGEVKRFDGKMPWLREEEKVV 202

Query: 2437 FGRMKKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNEL 2258
            F RMKKEK++T+AE+SL +  L RLR  A +M +W+KV K GVT+ VVDEI+  WRKNEL
Sbjct: 203  FRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNEL 262

Query: 2257 AMLKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRHAS 2078
             M+KF +PLCRNMDRA+EIIE+KT GLVVW KK++LVVYRGC++ LTSK     + R A 
Sbjct: 263  VMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPRCAD 322

Query: 2077 SVETFLSEVHLVKTEDNIAIS----NIGTKEIIVDGQNRVEDSLPT--FVEENLALQSVN 1916
              E   S    + + +NI +S    N  T +  +  ++R ++S+P   F++E+   Q V 
Sbjct: 323  GQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDENNQPVI 382

Query: 1915 GTLYEREADRLLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLTND 1736
            G+LYERE DRLLDGLGPRF+DWW  KPLP+DADLLPE V GFR PLR  PP+ RP LT+D
Sbjct: 383  GSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDD 442

Query: 1735 ELTYLRKLARPLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMAWE 1556
            EL YLRKL  PLP HF LG+N  LQGLA+AI+KLWEKSLI KIA+KWGI NT+NEQMA+E
Sbjct: 443  ELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYE 502

Query: 1555 LK------------------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIESFF 1430
            LK                  RGKDFLP  VANLVV+RE  L+RCQL+EE AR K  E+  
Sbjct: 503  LKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEEGARVKVAETCQ 562

Query: 1429 VTDETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKLFL 1250
            V DE +  TSTVGT SEF+DIQT+ +G     ++++++Q  A+KE LE+ELR QERKL +
Sbjct: 563  VADEPLAKTSTVGTLSEFEDIQTR-FGDLKKESSELELQLEAQKENLERELRNQERKLSI 621

Query: 1249 LKLKIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVFDG 1070
            L +KIE+SAKEL+KL S  +PAE+  D E+ITEEER+C  KIGLK++  LVLGRRGVF+G
Sbjct: 622  LNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFLVLGRRGVFNG 681

Query: 1069 VIESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYRGK 890
            VIE ++QHWKHREVVKVITMQR++++VI T               EKL++GHA+++YRGK
Sbjct: 682  VIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLKEGHALIIYRGK 741

Query: 889  NYRRPLKLLPGNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKLRHLLRRNEEA 710
            NYRRPLKL+  NLLTKREAL++S+ +QRIGSLKFFAYQR++ I DL+ KL  L  R    
Sbjct: 742  NYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDLKLKLAELKDRRVGT 801

Query: 709  TRRESE 692
            ++RE+E
Sbjct: 802  SQRENE 807


>ref|XP_007033218.1| maize chloroplast splicing factor CRS1, putative isoform 2 [Theobroma
            cacao] gi|508712247|gb|EOY04144.1| maize chloroplast
            splicing factor CRS1, putative isoform 2 [Theobroma
            cacao]
          Length = 804

 Score =  707 bits (1824), Expect = 0.0
 Identities = 390/723 (53%), Positives = 501/723 (69%), Gaps = 29/723 (4%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRI--KKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAM 2609
            +KMPTAPWMKGPLLL   EVL+ S+   KK+ N +     +  D+ L  K SG RGK+ M
Sbjct: 88   IKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKA----KAPDKALFGKESGVRGKKVM 143

Query: 2608 RKIVESITKLQEFHXXXXXXXXXXXXXFRVP--LERVCEDVD-SELEARVPWAARVERIV 2438
            +KI+ ++  LQ  +             F V   LE    D +    + ++PW    E++V
Sbjct: 144  KKIIRNVEMLQG-NEVLEDTQIGIREEFEVGNWLEEFGSDGEVKRFDGKMPWLREEEKVV 202

Query: 2437 FGRMKKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNEL 2258
            F RMKKEK++T+AE+SL +  L RLR  A +M +W+KV K GVT+ VVDEI+  WRKNEL
Sbjct: 203  FRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNEL 262

Query: 2257 AMLKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRHAS 2078
             M+KF +PLCRNMDRA+EIIE+KT GLVVW KK++LVVYRGC++ LTSK     + R A 
Sbjct: 263  VMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPRCAD 322

Query: 2077 SVETFLSEVHLVKTEDNIAIS----NIGTKEIIVDGQNRVEDSLPT--FVEENLALQSVN 1916
              E   S    + + +NI +S    N  T +  +  ++R ++S+P   F++E+   Q V 
Sbjct: 323  GQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDENNQPVI 382

Query: 1915 GTLYEREADRLLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLTND 1736
            G+LYERE DRLLDGLGPRF+DWW  KPLP+DADLLPE V GFR PLR  PP+ RP LT+D
Sbjct: 383  GSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDD 442

Query: 1735 ELTYLRKLARPLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMAWE 1556
            EL YLRKL  PLP HF LG+N  LQGLA+AI+KLWEKSLI KIA+KWGI NT+NEQMA+E
Sbjct: 443  ELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYE 502

Query: 1555 LK------------------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIESFF 1430
            LK                  RGKDFLP  VANLVV+RE  L+RCQL+EE AR K  E+  
Sbjct: 503  LKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEEGARVKVAETCQ 562

Query: 1429 VTDETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKLFL 1250
            V DE +  TSTVGT SEF+DIQT+ +G     ++++++Q  A+KE LE+ELR QERKL +
Sbjct: 563  VADEPLAKTSTVGTLSEFEDIQTR-FGDLKKESSELELQLEAQKENLERELRNQERKLSI 621

Query: 1249 LKLKIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVFDG 1070
            L +KIE+SAKEL+KL S  +PAE+  D E+ITEEER+C  KIGLK++  LVLGRRGVF+G
Sbjct: 622  LNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFLVLGRRGVFNG 681

Query: 1069 VIESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYRGK 890
            VIE ++QHWKHREVVKVITMQR++++VI T               EKL++GHA+++YRGK
Sbjct: 682  VIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLKEGHALIIYRGK 741

Query: 889  NYRRPLKLLPGNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKLRHLLRRNEEA 710
            NYRRPLKL+  NLLTKREAL++S+ +QRIGSLKFFAYQR++ I DL+ KL  L  R    
Sbjct: 742  NYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDLKLKLAELKDRRVGT 801

Query: 709  TRR 701
            ++R
Sbjct: 802  SQR 804


>ref|XP_007033220.1| maize chloroplast splicing factor CRS1, putative isoform 4 [Theobroma
            cacao] gi|508712249|gb|EOY04146.1| maize chloroplast
            splicing factor CRS1, putative isoform 4 [Theobroma
            cacao]
          Length = 767

 Score =  704 bits (1817), Expect = 0.0
 Identities = 387/710 (54%), Positives = 496/710 (69%), Gaps = 29/710 (4%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRI--KKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAM 2609
            +KMPTAPWMKGPLLL   EVL+ S+   KK+ N +     +  D+ L  K SG RGK+ M
Sbjct: 62   IKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKA----KAPDKALFGKESGVRGKKVM 117

Query: 2608 RKIVESITKLQEFHXXXXXXXXXXXXXFRVP--LERVCEDVD-SELEARVPWAARVERIV 2438
            +KI+ ++  LQ  +             F V   LE    D +    + ++PW    E++V
Sbjct: 118  KKIIRNVEMLQG-NEVLEDTQIGIREEFEVGNWLEEFGSDGEVKRFDGKMPWLREEEKVV 176

Query: 2437 FGRMKKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNEL 2258
            F RMKKEK++T+AE+SL +  L RLR  A +M +W+KV K GVT+ VVDEI+  WRKNEL
Sbjct: 177  FRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNEL 236

Query: 2257 AMLKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRHAS 2078
             M+KF +PLCRNMDRA+EIIE+KT GLVVW KK++LVVYRGC++ LTSK     + R A 
Sbjct: 237  VMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPRCAD 296

Query: 2077 SVETFLSEVHLVKTEDNIAIS----NIGTKEIIVDGQNRVEDSLPT--FVEENLALQSVN 1916
              E   S    + + +NI +S    N  T +  +  ++R ++S+P   F++E+   Q V 
Sbjct: 297  GQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDENNQPVI 356

Query: 1915 GTLYEREADRLLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLTND 1736
            G+LYERE DRLLDGLGPRF+DWW  KPLP+DADLLPE V GFR PLR  PP+ RP LT+D
Sbjct: 357  GSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDD 416

Query: 1735 ELTYLRKLARPLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMAWE 1556
            EL YLRKL  PLP HF LG+N  LQGLA+AI+KLWEKSLI KIA+KWGI NT+NEQMA+E
Sbjct: 417  ELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYE 476

Query: 1555 LK------------------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIESFF 1430
            LK                  RGKDFLP  VANLVV+RE  L+RCQL+EE AR K  E+  
Sbjct: 477  LKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEEGARVKVAETCQ 536

Query: 1429 VTDETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKLFL 1250
            V DE +  TSTVGT SEF+DIQT+ +G     ++++++Q  A+KE LE+ELR QERKL +
Sbjct: 537  VADEPLAKTSTVGTLSEFEDIQTR-FGDLKKESSELELQLEAQKENLERELRNQERKLSI 595

Query: 1249 LKLKIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVFDG 1070
            L +KIE+SAKEL+KL S  +PAE+  D E+ITEEER+C  KIGLK++  LVLGRRGVF+G
Sbjct: 596  LNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFLVLGRRGVFNG 655

Query: 1069 VIESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYRGK 890
            VIE ++QHWKHREVVKVITMQR++++VI T               EKL++GHA+++YRGK
Sbjct: 656  VIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLKEGHALIIYRGK 715

Query: 889  NYRRPLKLLPGNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKL 740
            NYRRPLKL+  NLLTKREAL++S+ +QRIGSLKFFAYQR++ I DL+ KL
Sbjct: 716  NYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDLKLKL 765


>ref|XP_007033219.1| maize chloroplast splicing factor CRS1, putative isoform 3 [Theobroma
            cacao] gi|508712248|gb|EOY04145.1| maize chloroplast
            splicing factor CRS1, putative isoform 3 [Theobroma
            cacao]
          Length = 788

 Score =  704 bits (1817), Expect = 0.0
 Identities = 387/710 (54%), Positives = 496/710 (69%), Gaps = 29/710 (4%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRI--KKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAM 2609
            +KMPTAPWMKGPLLL   EVL+ S+   KK+ N +     +  D+ L  K SG RGK+ M
Sbjct: 62   IKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKA----KAPDKALFGKESGVRGKKVM 117

Query: 2608 RKIVESITKLQEFHXXXXXXXXXXXXXFRVP--LERVCEDVD-SELEARVPWAARVERIV 2438
            +KI+ ++  LQ  +             F V   LE    D +    + ++PW    E++V
Sbjct: 118  KKIIRNVEMLQG-NEVLEDTQIGIREEFEVGNWLEEFGSDGEVKRFDGKMPWLREEEKVV 176

Query: 2437 FGRMKKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNEL 2258
            F RMKKEK++T+AE+SL +  L RLR  A +M +W+KV K GVT+ VVDEI+  WRKNEL
Sbjct: 177  FRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNEL 236

Query: 2257 AMLKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRHAS 2078
             M+KF +PLCRNMDRA+EIIE+KT GLVVW KK++LVVYRGC++ LTSK     + R A 
Sbjct: 237  VMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPRCAD 296

Query: 2077 SVETFLSEVHLVKTEDNIAIS----NIGTKEIIVDGQNRVEDSLPT--FVEENLALQSVN 1916
              E   S    + + +NI +S    N  T +  +  ++R ++S+P   F++E+   Q V 
Sbjct: 297  GQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDENNQPVI 356

Query: 1915 GTLYEREADRLLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLTND 1736
            G+LYERE DRLLDGLGPRF+DWW  KPLP+DADLLPE V GFR PLR  PP+ RP LT+D
Sbjct: 357  GSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDD 416

Query: 1735 ELTYLRKLARPLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMAWE 1556
            EL YLRKL  PLP HF LG+N  LQGLA+AI+KLWEKSLI KIA+KWGI NT+NEQMA+E
Sbjct: 417  ELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYE 476

Query: 1555 LK------------------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIESFF 1430
            LK                  RGKDFLP  VANLVV+RE  L+RCQL+EE AR K  E+  
Sbjct: 477  LKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEEGARVKVAETCQ 536

Query: 1429 VTDETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKLFL 1250
            V DE +  TSTVGT SEF+DIQT+ +G     ++++++Q  A+KE LE+ELR QERKL +
Sbjct: 537  VADEPLAKTSTVGTLSEFEDIQTR-FGDLKKESSELELQLEAQKENLERELRNQERKLSI 595

Query: 1249 LKLKIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVFDG 1070
            L +KIE+SAKEL+KL S  +PAE+  D E+ITEEER+C  KIGLK++  LVLGRRGVF+G
Sbjct: 596  LNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFLVLGRRGVFNG 655

Query: 1069 VIESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYRGK 890
            VIE ++QHWKHREVVKVITMQR++++VI T               EKL++GHA+++YRGK
Sbjct: 656  VIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLKEGHALIIYRGK 715

Query: 889  NYRRPLKLLPGNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKL 740
            NYRRPLKL+  NLLTKREAL++S+ +QRIGSLKFFAYQR++ I DL+ KL
Sbjct: 716  NYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDLKLKL 765


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
            gi|223544130|gb|EEF45655.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 742

 Score =  695 bits (1794), Expect = 0.0
 Identities = 398/724 (54%), Positives = 492/724 (67%), Gaps = 32/724 (4%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAMRK 2603
            +K+PTAPWMKGPLLL   E+++LS+  + KN       EK D+ L  K SG RGK+AM K
Sbjct: 58   IKVPTAPWMKGPLLLQPHELINLSK-PRNKNSSNNANIEKSDKVLTGKESGVRGKKAMEK 116

Query: 2602 IVESITKLQEFHXXXXXXXXXXXXXFRVPLERVCEDVDSEL------------EARVPWA 2459
            IV+SI +LQE +              +  L+    ++  +L            +   PW 
Sbjct: 117  IVKSIEQLQE-NQALEKTQCDSQAYEKTQLDSEAFEIGEKLGLIREHGDFGVNKKLKPWE 175

Query: 2458 ARVERIVFGRMKKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRK 2279
             R E+ V+ R+KKEK VTKAEL L +  L  LR++A+KM +WVKV KAGVTQ VVD+IR 
Sbjct: 176  -REEKFVYWRIKKEKAVTKAELILEKELLEILRTEASKMRKWVKVMKAGVTQSVVDQIRY 234

Query: 2278 VWRKNELAMLKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPK 2099
             WR NELAM+KFDLPLCRNMDRA+EI+E+KTGGLVVW++K+SLV+YRGCNY LT      
Sbjct: 235  AWRNNELAMVKFDLPLCRNMDRAREIVELKTGGLVVWTRKDSLVIYRGCNYHLTK----- 289

Query: 2098 LHSRHASSVETFLSEVHLVKTEDNIAISNIGTKEIIVDGQNRVEDSLPT--FVEENLALQ 1925
              S H S+++                   IG+K    DG+   E+ +PT  F+ ++    
Sbjct: 290  --SSHVSTMD-----------------EKIGSK----DGE---EEYIPTSIFIGDDANTP 323

Query: 1924 SVNGTLYEREADRLLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTL 1745
            ++NG+L+ERE DRLLDGLGPRFVDWW  KPLPVDADLLPEVV GF  P R    + R  L
Sbjct: 324  TINGSLFERETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVAGFMPPSRF--HYARAKL 381

Query: 1744 TNDELTYLRKLARPLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQM 1565
             +DELTYLRKLA  LPTHFVLGRN +LQGLA+AI+KLWE+SLI KIAVKWGIPNT+NEQM
Sbjct: 382  KDDELTYLRKLAYALPTHFVLGRNRRLQGLAAAILKLWERSLIAKIAVKWGIPNTDNEQM 441

Query: 1564 AWELK------------------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIE 1439
            A ELK                  RGKDFLP  VA+LVV RE ELK CQL+EE AR KAIE
Sbjct: 442  ANELKHLTGGVLLLRNKFFIILFRGKDFLPCQVADLVVKRENELKICQLNEEGARLKAIE 501

Query: 1438 SFFVTDETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERK 1259
            + F  DE V   + +GT +EFQDIQ ++  L   G     +Q  AEKE LE+ELR QE K
Sbjct: 502  TSFTDDELVVKATKIGTLNEFQDIQVRFKELAK-GYRDSKLQLEAEKEKLERELRIQEHK 560

Query: 1258 LFLLKLKIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGV 1079
            L +LK KIE+SA+ELSKLNS W PA++ AD EM+TEEER+C  KIGLKM  +L+LGRRGV
Sbjct: 561  LLILKSKIEKSARELSKLNSAWAPADQDADLEMMTEEERECLRKIGLKMRSSLLLGRRGV 620

Query: 1078 FDGVIESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLY 899
            FDGVIE +HQHWKHREVVKVI++QRM++QVI+T               +KL++GHAI++Y
Sbjct: 621  FDGVIEGLHQHWKHREVVKVISLQRMFAQVIRTAKFLEAETGGILVSIDKLKEGHAIIIY 680

Query: 898  RGKNYRRPLKLLPGNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKLRHLLRRN 719
            RGKNYRRP +LL  NLLTKR+AL RSL MQRIGSL+FFAYQRQ  I +L+ +L   L+ +
Sbjct: 681  RGKNYRRPQRLL-NNLLTKRKALCRSLEMQRIGSLRFFAYQRQHSIRELKFQLAQ-LQES 738

Query: 718  EEAT 707
            EE T
Sbjct: 739  EERT 742


>ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citrus clementina]
            gi|557532797|gb|ESR43980.1| hypothetical protein
            CICLE_v10013368mg [Citrus clementina]
          Length = 770

 Score =  687 bits (1773), Expect = 0.0
 Identities = 383/707 (54%), Positives = 477/707 (67%), Gaps = 46/707 (6%)
 Frame = -3

Query: 2779 KMPTAPWMKGPLLLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAMRKI 2600
            KMPTAPWM+ P++L   E++  S+ K  K+ +K D      + L  K SG RGKQAM+KI
Sbjct: 60   KMPTAPWMRSPIVLQPDEIIKPSKPKTKKSFKKTD------KGLTAKESGVRGKQAMKKI 113

Query: 2599 VESITKLQEFHXXXXXXXXXXXXXFRVPLERVC--------EDVDSELEARVPWAARVER 2444
            +E+I KLQ+                     R C        ED+      +VPW  R ER
Sbjct: 114  IENIEKLQKDQILDETQKKDMEKFEF----RGCFEENGSDEEDLRGGFGGKVPWL-REER 168

Query: 2443 IVFGRMKKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKN 2264
             VF RMKKE++VTKAE  L    + RL+ +A KM +WVKVKKAGVT+ VV EIR  WR+N
Sbjct: 169  FVFRRMKKERMVTKAETMLDGELIERLKDEARKMRKWVKVKKAGVTESVVFEIRLAWRRN 228

Query: 2263 ELAMLKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRH 2084
            ELAM+KFD+PLCRNMDRA+EI+E+KTGGLV+W+KK++ VVYRG      SK+  K+  R 
Sbjct: 229  ELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRGDG----SKSSVKMCPRS 284

Query: 2083 ASSVETFLSEVHLVKTEDNIAISNIGTKEIIVDGQNRV-----EDSLPT--FVEENLALQ 1925
            A   E  LS+   +  E  + +S I +    +D QNR      E+SLPT  F+++NL + 
Sbjct: 285  ADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLD-QNRSLKDGEENSLPTSIFMDKNLRID 343

Query: 1924 SVNGTLYEREADRLLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTL 1745
                +LYERE DRLLDGLGPRFVDWW  KPLPVD DLLPEVV GF+ P R  PP  R  L
Sbjct: 344  K---SLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPFRLSPPDARSKL 400

Query: 1744 TNDELTYLRKLARPLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQM 1565
            T+DELTYLRKLA PLPTHFVLGRN  LQGLA+AI+KLWEKSL+ KIAVKWGIPNT+NEQM
Sbjct: 401  TDDELTYLRKLAHPLPTHFVLGRNRGLQGLATAILKLWEKSLVAKIAVKWGIPNTDNEQM 460

Query: 1564 AWELK-------------------------------RGKDFLPSTVANLVVDREKELKRC 1478
            A ELK                               RGKDFLP  V NL+V+RE+EL+ C
Sbjct: 461  ANELKNFKFSDDGVLLMQHLTGGVLLLRNKFLIILYRGKDFLPCGVENLIVERERELQIC 520

Query: 1477 QLHEERARWKAIESFFVTDETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEK 1298
            Q HEE AR KAIE+F + DE +E TS  GT SEFQ+IQ+  +G    GN + ++Q  AE 
Sbjct: 521  QNHEEGARLKAIETFHLPDEPLEKTSKAGTLSEFQNIQSD-FGDLKMGNREFELQLEAEI 579

Query: 1297 EGLEKELRKQERKLFLLKLKIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHKIGL 1118
            E LE+ELRKQERKLF+L +KIE+SAKELS+LNS W+P E+  D EMITEEERQC HKIG+
Sbjct: 580  EDLERELRKQERKLFILNIKIEKSAKELSRLNSAWKPREQDPDLEMITEEERQCLHKIGM 639

Query: 1117 KMDKTLVLGRRGVFDGVIESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXX 938
            K++  L+LGRRGVFDGVIE +HQHWK+REV +VIT Q++++QVI T              
Sbjct: 640  KINSNLLLGRRGVFDGVIEGLHQHWKYREVARVITKQKLFAQVIYTAKSLVAESGGILIS 699

Query: 937  XEKLQKGHAIVLYRGKNYRRPLKLLPGNLLTKREALQRSLGMQRIGS 797
             +KL++GHAI++YRGKNYRRPLKL+  NLL+KR+AL+RSL MQR+G+
Sbjct: 700  VDKLKEGHAIIIYRGKNYRRPLKLMTQNLLSKRQALRRSLEMQRLGA 746


>ref|XP_007033221.1| maize chloroplast splicing factor CRS1, putative isoform 5 [Theobroma
            cacao] gi|508712250|gb|EOY04147.1| maize chloroplast
            splicing factor CRS1, putative isoform 5 [Theobroma
            cacao]
          Length = 788

 Score =  681 bits (1757), Expect = 0.0
 Identities = 375/695 (53%), Positives = 481/695 (69%), Gaps = 29/695 (4%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRI--KKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAM 2609
            +KMPTAPWMKGPLLL   EVL+ S+   KK+ N +     +  D+ L  K SG RGK+ M
Sbjct: 88   IKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKA----KAPDKALFGKESGVRGKKVM 143

Query: 2608 RKIVESITKLQEFHXXXXXXXXXXXXXFRVP--LERVCEDVD-SELEARVPWAARVERIV 2438
            +KI+ ++  LQ  +             F V   LE    D +    + ++PW    E++V
Sbjct: 144  KKIIRNVEMLQG-NEVLEDTQIGIREEFEVGNWLEEFGSDGEVKRFDGKMPWLREEEKVV 202

Query: 2437 FGRMKKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNEL 2258
            F RMKKEK++T+AE+SL +  L RLR  A +M +W+KV K GVT+ VVDEI+  WRKNEL
Sbjct: 203  FRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNEL 262

Query: 2257 AMLKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRHAS 2078
             M+KF +PLCRNMDRA+EIIE+KT GLVVW KK++LVVYRGC++ LTSK     + R A 
Sbjct: 263  VMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPRCAD 322

Query: 2077 SVETFLSEVHLVKTEDNIAIS----NIGTKEIIVDGQNRVEDSLPT--FVEENLALQSVN 1916
              E   S    + + +NI +S    N  T +  +  ++R ++S+P   F++E+   Q V 
Sbjct: 323  GQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDENNQPVI 382

Query: 1915 GTLYEREADRLLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLTND 1736
            G+LYERE DRLLDGLGPRF+DWW  KPLP+DADLLPE V GFR PLR  PP+ RP LT+D
Sbjct: 383  GSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDD 442

Query: 1735 ELTYLRKLARPLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMAWE 1556
            EL YLRKL  PLP HF LG+N  LQGLA+AI+KLWEKSLI KIA+KWGI NT+NEQMA+E
Sbjct: 443  ELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYE 502

Query: 1555 LK------------------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIESFF 1430
            LK                  RGKDFLP  VANLVV+RE  L+RCQL+EE AR K  E+  
Sbjct: 503  LKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEEGARVKVAETCQ 562

Query: 1429 VTDETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKLFL 1250
            V DE +  TSTVGT SEF+DIQT+ +G     ++++++Q  A+KE LE+ELR QERKL +
Sbjct: 563  VADEPLAKTSTVGTLSEFEDIQTR-FGDLKKESSELELQLEAQKENLERELRNQERKLSI 621

Query: 1249 LKLKIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVFDG 1070
            L +KIE+SAKEL+KL S  +PAE+  D E+ITEEER+C  KIGLK++  LVLGRRGVF+G
Sbjct: 622  LNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFLVLGRRGVFNG 681

Query: 1069 VIESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYRGK 890
            VIE ++QHWKHREVVKVITMQR++++VI T               EKL++GHA+++YRGK
Sbjct: 682  VIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLKEGHALIIYRGK 741

Query: 889  NYRRPLKLLPGNLLTKREALQRSLGMQRIGSLKFF 785
            NYRRPLKL+  NLLTKREAL++S+ +QRIG   FF
Sbjct: 742  NYRRPLKLMTNNLLTKREALRQSIELQRIGVSPFF 776


>ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Glycine max]
            gi|571550194|ref|XP_006603056.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Glycine max]
            gi|571550197|ref|XP_006603057.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Glycine max]
          Length = 747

 Score =  677 bits (1747), Expect = 0.0
 Identities = 374/708 (52%), Positives = 486/708 (68%), Gaps = 19/708 (2%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAMRK 2603
            +K PT PWMK PLLL   E++DLS  K  K   K +  E  D+ L  K    RGK+AM+K
Sbjct: 44   IKSPTPPWMKVPLLLQPHELVDLSNPKSKKF--KPEKHELSDKALMGKEV--RGKRAMKK 99

Query: 2602 IVESITKLQEF-HXXXXXXXXXXXXXFRVPLERVCEDVDSELEARVPWAARVERIVFGRM 2426
            IV+ + KL +  +             F   LE + E+ +   + R+PW  + E+  F ++
Sbjct: 100  IVDRVEKLHKTQNSNETRVDSLNVENFGGYLEILKENEEVRSKGRMPWE-KDEKFGFVKV 158

Query: 2425 KKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNELAMLK 2246
            K+EK VT AEL+L +  LRRLR++AA+M  W+KVKKAGVTQ VVD+I++ WR+NELAM+K
Sbjct: 159  KREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIK 218

Query: 2245 FDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRHASSVET 2066
            FD+PLCRNMDRA+EI+E KTGGLVV SKK+ LVVYRGCN+ LT+K  P L + H      
Sbjct: 219  FDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLTTKGSPSLRTNHYE---- 274

Query: 2065 FLSEVHLVKTEDNIAISNIGTKEIIVDGQNRVEDSLPTFVEENLALQSVNGTLYEREADR 1886
             ++ V L    D   + +  +   +++     +DS+ T +++ +  Q VNG+LYERE +R
Sbjct: 275  -MNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQD-VNCQLVNGSLYERETER 332

Query: 1885 LLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLTNDELTYLRKLAR 1706
            LLDGLGPRF+DWW  KPLPVDADLLPE V GF+ P R CPPH    LT+ ELTY RKLA+
Sbjct: 333  LLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTDYELTYFRKLAQ 392

Query: 1705 PLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMAWELK-------- 1550
             LPTHFVLGRN  L+GLASAI+KLWEKSLI KIA+K+GIPNT+NE MA ELK        
Sbjct: 393  SLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKYGIPNTDNEMMANELKCLTGGVLL 452

Query: 1549 ----------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIESFFVTDETVENTS 1400
                      RG DFLP +VA+LV  RE ELK  QLHEE AR KAI++F   DE   +TS
Sbjct: 453  LRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQLHEEVARMKAIQAFSPIDEVPLDTS 512

Query: 1399 TVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKLFLLKLKIERSAK 1220
            T GT +EF+ IQTK      + N   ++Q  AE   LEKEL++++R+ F+L  KI+RS +
Sbjct: 513  TSGTLTEFRKIQTKLEDT-KSVNVDSNIQLEAEICRLEKELKEEQRRAFILNKKIKRSER 571

Query: 1219 ELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVFDGVIESMHQHWK 1040
            ELSKLN+ W P+E+  D E++T+EER+CF KIGLKM  +L+LGRRG+FDGV+E +HQHWK
Sbjct: 572  ELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQSSLLLGRRGIFDGVLEGLHQHWK 631

Query: 1039 HREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYRGKNYRRPLKLLP 860
            HREVVKVITMQ+++SQVI T               +KL++GHAI++YRGKNY+RP   L 
Sbjct: 632  HREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKLKEGHAIIIYRGKNYKRPSIKLA 691

Query: 859  GNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKLRHLLRRNE 716
             NLLTKREAL+RSL MQRIGS+KFFA+QR++ IS+L+ KL  L ++ E
Sbjct: 692  KNLLTKREALRRSLEMQRIGSMKFFAHQREQAISELEVKLADLQQKKE 739


>ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 750

 Score =  674 bits (1739), Expect = 0.0
 Identities = 372/700 (53%), Positives = 482/700 (68%), Gaps = 19/700 (2%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAMRK 2603
            +K PT PWMK PLLL   E++DLS  K  K   K +  E  D+ L  K    RGK+AM+K
Sbjct: 44   IKSPTPPWMKVPLLLQPHELVDLSNPKSKKF--KPEKHELSDKALMGKEV--RGKRAMKK 99

Query: 2602 IVESITKLQEF-HXXXXXXXXXXXXXFRVPLERVCEDVDSELEARVPWAARVERIVFGRM 2426
            IV+ + KL +  +             F   LE + E+ +   + R+PW  + E+  F ++
Sbjct: 100  IVDRVEKLHKTQNSNETRVDSLNVENFGGYLEILKENEEVRSKGRMPWE-KDEKFGFVKV 158

Query: 2425 KKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNELAMLK 2246
            K+EK VT AEL+L +  LRRLR++AA+M  W+KVKKAGVTQ VVD+I++ WR+NELAM+K
Sbjct: 159  KREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIK 218

Query: 2245 FDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRHASSVET 2066
            FD+PLCRNMDRA+EI+E KTGGLVV SKK+ LVVYRGCN+ LT+K  P L + H      
Sbjct: 219  FDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLTTKGSPSLRTNHYE---- 274

Query: 2065 FLSEVHLVKTEDNIAISNIGTKEIIVDGQNRVEDSLPTFVEENLALQSVNGTLYEREADR 1886
             ++ V L    D   + +  +   +++     +DS+ T +++ +  Q VNG+LYERE +R
Sbjct: 275  -MNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQD-VNCQLVNGSLYERETER 332

Query: 1885 LLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLTNDELTYLRKLAR 1706
            LLDGLGPRF+DWW  KPLPVDADLLPE V GF+ P R CPPH    LT+ ELTY RKLA+
Sbjct: 333  LLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTDYELTYFRKLAQ 392

Query: 1705 PLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMAWELK-------- 1550
             LPTHFVLGRN  L+GLASAI+KLWEKSLI KIA+K+GIPNT+NE MA ELK        
Sbjct: 393  SLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKYGIPNTDNEMMANELKCLTGGVLL 452

Query: 1549 ----------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIESFFVTDETVENTS 1400
                      RG DFLP +VA+LV  RE ELK  QLHEE AR KAI++F   DE   +TS
Sbjct: 453  LRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQLHEEVARMKAIQAFSPIDEVPLDTS 512

Query: 1399 TVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKLFLLKLKIERSAK 1220
            T GT +EF+ IQTK      + N   ++Q  AE   LEKEL++++R+ F+L  KI+RS +
Sbjct: 513  TSGTLTEFRKIQTKLEDT-KSVNVDSNIQLEAEICRLEKELKEEQRRAFILNKKIKRSER 571

Query: 1219 ELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVFDGVIESMHQHWK 1040
            ELSKLN+ W P+E+  D E++T+EER+CF KIGLKM  +L+LGRRG+FDGV+E +HQHWK
Sbjct: 572  ELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQSSLLLGRRGIFDGVLEGLHQHWK 631

Query: 1039 HREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYRGKNYRRPLKLLP 860
            HREVVKVITMQ+++SQVI T               +KL++GHAI++YRGKNY+RP   L 
Sbjct: 632  HREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKLKEGHAIIIYRGKNYKRPSIKLA 691

Query: 859  GNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKL 740
             NLLTKREAL+RSL MQRIGS+KFFA+QR++ IS+L+ KL
Sbjct: 692  KNLLTKREALRRSLEMQRIGSMKFFAHQREQAISELEVKL 731


>ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Glycine max]
          Length = 744

 Score =  673 bits (1737), Expect = 0.0
 Identities = 375/717 (52%), Positives = 488/717 (68%), Gaps = 19/717 (2%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAMRK 2603
            +K PT PWMK PLLL   E++DLS  K  K   K +  E  D+ L  K    RGK+AM+K
Sbjct: 44   IKSPTPPWMKVPLLLQPHELVDLSNPKSKKF--KPEKHELSDKALMGKEV--RGKRAMKK 99

Query: 2602 IVESITKLQEF-HXXXXXXXXXXXXXFRVPLERVCEDVDSELEARVPWAARVERIVFGRM 2426
            IV+ + KL +  +             F   LE + E+ +   + R+PW  + E+  F ++
Sbjct: 100  IVDRVEKLHKTQNSNETRVDSLNVENFGGYLEILKENEEVRSKGRMPWE-KDEKFGFVKV 158

Query: 2425 KKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNELAMLK 2246
            K+EK VT AEL+L +  LRRLR++AA+M  W+KVKKAGVTQ VVD+I++ WR+NELAM+K
Sbjct: 159  KREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIK 218

Query: 2245 FDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRHASSVET 2066
            FD+PLCRNMDRA+EI+E KTGGLVV SKK+ LVVYRGCN+ LT+K  P L + H      
Sbjct: 219  FDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLTTKGSPSLRTNHYE---- 274

Query: 2065 FLSEVHLVKTEDNIAISNIGTKEIIVDGQNRVEDSLPTFVEENLALQSVNGTLYEREADR 1886
             ++ V L    D   + +  +   +++     +DS+ T +++ +  Q VNG+LYERE +R
Sbjct: 275  -MNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQD-VNCQLVNGSLYERETER 332

Query: 1885 LLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLTNDELTYLRKLAR 1706
            LLDGLGPRF+DWW  KPLPVDADLLPE V GF+ P R CPPH    LT+ ELTY RKLA+
Sbjct: 333  LLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTDYELTYFRKLAQ 392

Query: 1705 PLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMAWELK-------- 1550
             LPTHFVLGRN  L+GLASAI+KLWEKSLI KIA+K+GIPNT+NE MA ELK        
Sbjct: 393  SLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKYGIPNTDNEMMANELKCLTGGVLL 452

Query: 1549 ----------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIESFFVTDETVENTS 1400
                      RG DFLP +VA+LV  RE ELK  QLHEE AR KAI++F   DE   +TS
Sbjct: 453  LRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQLHEEVARMKAIQAFSPIDEVPLDTS 512

Query: 1399 TVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKLFLLKLKIERSAK 1220
            T GT +EF+ IQTK      + N   ++Q  AE   LEKEL++++R+ F+L  KI+RS +
Sbjct: 513  TSGTLTEFRKIQTKLEDT-KSVNVDSNIQLEAEICRLEKELKEEQRRAFILNKKIKRSER 571

Query: 1219 ELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVFDGVIESMHQHWK 1040
            ELSKLN+ W P+E+  D E++T+EER+CF KIGLKM  +L+LGRRG+FDGV+E +HQHWK
Sbjct: 572  ELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQSSLLLGRRGIFDGVLEGLHQHWK 631

Query: 1039 HREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYRGKNYRRPLKLLP 860
            HREVVKVITMQ+++SQVI T               +KL++GHAI++YRGKNY+RP   L 
Sbjct: 632  HREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKLKEGHAIIIYRGKNYKRPSIKLA 691

Query: 859  GNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKLRHLLRRNEEATRRESEN 689
             NLLTKREAL+RSL MQRIGS+KFFA+QR++ IS+L+      L++ +E   RE  N
Sbjct: 692  KNLLTKREALRRSLEMQRIGSMKFFAHQREQAISELEAD----LQQKKEIELREFAN 744


>ref|XP_006842364.1| hypothetical protein AMTR_s00079p00185530 [Amborella trichopoda]
            gi|548844430|gb|ERN04039.1| hypothetical protein
            AMTR_s00079p00185530 [Amborella trichopoda]
          Length = 886

 Score =  672 bits (1735), Expect = 0.0
 Identities = 376/739 (50%), Positives = 477/739 (64%), Gaps = 48/739 (6%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAMRK 2603
            +KMPTAPWM+GPLLLP+ +VLDLS+ +K K+  +++ D+K    L   V GGR K AMR 
Sbjct: 181  VKMPTAPWMRGPLLLPADDVLDLSKSRK-KSSNEMNSDDKA---LTGGVRGGRSKHAMRL 236

Query: 2602 IVESITKLQEFHXXXXXXXXXXXXXF-------------------------RVPLERVCE 2498
            I+E+ITKL+E H                                        +PL+ V  
Sbjct: 237  IMENITKLKEIHEENEQKKETHIVLSDEVDIRSKINSSFSEGATKSIEAGFNLPLKEVSV 296

Query: 2497 DVDSELEARVPWAARVERIVFGRMKKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKK 2318
              D  +E ++PW    E+ VF R+KKEK  TKAELSLP+  L RLR     +T+WVKVKK
Sbjct: 297  SEDQAMETKLPWTM-AEKNVFRRVKKEKTPTKAELSLPKPLLTRLRDRGRTLTKWVKVKK 355

Query: 2317 AGVTQVVVDEIRKVWRKNELAMLKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYR 2138
            AGVTQ V++EI  VW+K ELAMLKFD+PLCRNMDRA EI+E KTGGLVVW KK +LVVYR
Sbjct: 356  AGVTQEVMNEIYAVWKKRELAMLKFDVPLCRNMDRATEIVETKTGGLVVWRKKGTLVVYR 415

Query: 2137 GCNYDLTSKAFPKLHSRHASSVETFLSEVHLVKTEDNIAISNIGTKEIIVDGQNRVEDSL 1958
            G NY          HS              L KT +    +N  + E+  D +    +  
Sbjct: 416  GTNY----------HS--------------LSKTSE----TNPWSLELFDDNKISAPNGF 447

Query: 1957 PTFVEENLALQS-----VNGTLYEREADRLLDGLGPRFVDWWYPKPLPVDADLLPEVVRG 1793
              F ++ +  Q+     +  TL+EREA+RLLD LGPRF+DWW+  PLPVDADLLPEV+  
Sbjct: 448  LNFKDDTMIYQAGSDGLMKETLFEREANRLLDELGPRFIDWWWSTPLPVDADLLPEVIPN 507

Query: 1792 FRTPLRRCPPHVRPTLTNDELTYLRKLARPLPTHFVLGRNTKLQGLASAIIKLWEKSLIV 1613
            FR PLR CPPH++  LT++ELTYLRK A+ LPTHF LG+NTKLQGLA+AI+KLWEKSLI 
Sbjct: 508  FRPPLRLCPPHMQSKLTDEELTYLRKFAKHLPTHFALGKNTKLQGLAAAILKLWEKSLIA 567

Query: 1612 KIAVKWGIPNTNNEQMAWELK------------------RGKDFLPSTVANLVVDREKEL 1487
            KIA+KWGIPN N++QMA+ELK                  RGKDFLP  VAN + +RE  L
Sbjct: 568  KIAIKWGIPNVNHQQMAYELKHLTGGVLLLQNKFFILLYRGKDFLPPGVANSIAERETTL 627

Query: 1486 KRCQLHEERARWKAIESFFVTDETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFL 1307
            K  Q+HEE AR  A   F   DET   TS  GT S+FQ+IQ ++   FN   T+ +++  
Sbjct: 628  KTLQIHEENARSIAATGFLSPDETQPTTSRTGTLSDFQEIQ-EHSHPFNESQTESNIKLE 686

Query: 1306 AEKEGLEKELRKQERKLFLLKLKIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHK 1127
            A KE LE ELRKQE  L +LKLK+ERS KE++KLNS W+PA+  ADQE IT+EE Q F K
Sbjct: 687  AAKEKLEIELRKQEHMLSILKLKVERSEKEMAKLNSAWQPAKGEADQETITKEEFQNFRK 746

Query: 1126 IGLKMDKTLVLGRRGVFDGVIESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXX 947
            +GLKMD+ L+LGRRGVFDGVI S+HQHWKHREVVK+++MQ+   +V +T           
Sbjct: 747  VGLKMDEVLLLGRRGVFDGVIGSIHQHWKHREVVKLVSMQKTLEEVTRTARMLETESGGI 806

Query: 946  XXXXEKLQKGHAIVLYRGKNYRRPLKLLPGNLLTKREALQRSLGMQRIGSLKFFAYQRQR 767
                 KL+KGHAI+LYRGKNYRRP KLLP NLL+K+EA  RS+ +QR GSLK+F  Q+++
Sbjct: 807  LIAVVKLRKGHAIILYRGKNYRRPPKLLPDNLLSKKEAFDRSIEIQRRGSLKYFICQQEQ 866

Query: 766  MISDLQRKLRHLLRRNEEA 710
             I  LQ++L+ L ++ E A
Sbjct: 867  SIWKLQQQLKKLQKQAEVA 885


>ref|XP_007139175.1| hypothetical protein PHAVU_008G007700g [Phaseolus vulgaris]
            gi|561012308|gb|ESW11169.1| hypothetical protein
            PHAVU_008G007700g [Phaseolus vulgaris]
          Length = 744

 Score =  665 bits (1716), Expect = 0.0
 Identities = 368/724 (50%), Positives = 487/724 (67%), Gaps = 26/724 (3%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAMRK 2603
            +K PT PWMKGPLLL  +E+LDLS  K  K   K++  E  D++L  K +  RGK+ M+K
Sbjct: 40   IKGPTPPWMKGPLLLQPNELLDLSNPKSKKF--KLERQELSDKDLMGKEA--RGKKTMKK 95

Query: 2602 IVESITKLQEFHXXXXXXXXXXXXXFRVPLERVCEDVDSELE--------ARVPWAARVE 2447
            IVE + KL   H                 +E +   +DS  E         R+PW     
Sbjct: 96   IVEKVEKLHGTHNSAGALIGSPN------VENIGGVLDSLKENEEVRRTKGRMPWE-NDW 148

Query: 2446 RIVFGRMKKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRK 2267
            + V+ ++K+++ VT AEL+L +   RRLR++AA M  W+KVKKAGVTQ VVD+I+  WR+
Sbjct: 149  KFVYEKIKRKRTVTAAELTLDKVLFRRLRNEAATMRTWIKVKKAGVTQDVVDQIKWTWRR 208

Query: 2266 NELAMLKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSR 2087
            NELAM+KFD+PLCRNM RA+EI+E KTGGLVV SKK+ LVVY G N+ LT+  +P L + 
Sbjct: 209  NELAMVKFDIPLCRNMSRAREIVETKTGGLVVLSKKDFLVVYHGGNHQLTTTGYPSLRTN 268

Query: 2086 HASSVETFLSEVHLVKTEDNIAISNIGTKEIIVDGQNRVEDSLPTFVEENLALQSVNGTL 1907
            H+      +S   L  T D  ++ +  +   +++     +DS+ T  E+N+  Q+ NG+L
Sbjct: 269  HSE-----MSGAELATTGDICSVDSNHSLSEMLNFIAEDKDSIATS-EQNMNFQTANGSL 322

Query: 1906 YEREADRLLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLTNDELT 1727
            YERE DRLLD LGPRF+DWW  KPLPVDADLLPE V GF+ PLR CPPH    L++ ELT
Sbjct: 323  YERETDRLLDDLGPRFIDWWMAKPLPVDADLLPEDVPGFQPPLRICPPHSCAKLSDYELT 382

Query: 1726 YLRKLARPLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMAWELK- 1550
            Y RKLA+ LPTHFVLGRN +L+GLA+AI+KLWEKSLI KI++K+GIPNT+NE MA ELK 
Sbjct: 383  YFRKLAQLLPTHFVLGRNKRLKGLAAAILKLWEKSLIAKISIKYGIPNTDNEMMANELKY 442

Query: 1549 -----------------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIESFFVTD 1421
                             RG DFLP  VA LV +RE ELK  +LHEE AR KA+E+    D
Sbjct: 443  LTGGVLLLRNKFYIILYRGNDFLPKRVATLVENRELELKSFELHEEVARMKALEALSPID 502

Query: 1420 ETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKLFLLKL 1241
            E  ++TST GT +EF++IQTK+      G+ ++++Q  AE   LEKEL++++ +  +L  
Sbjct: 503  EVPQDTSTSGTLTEFKEIQTKFEDA-KKGDIELNLQLEAEICRLEKELKEEQHRALILNK 561

Query: 1240 KIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVFDGVIE 1061
            K+E+S KELSKLN+ W P+E+  D EM+T+EER+CF KIGLKM   L+LGRRG+FDGV+E
Sbjct: 562  KMEKSGKELSKLNAAWTPSEQDTDLEMMTDEERECFRKIGLKMQSFLLLGRRGIFDGVLE 621

Query: 1060 SMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYRGKNYR 881
             +HQHWKHREVVKVITMQ+++SQVI T               + L++GHAI++YRGKNY 
Sbjct: 622  GLHQHWKHREVVKVITMQKLFSQVINTAKLLETESGGILVSVDNLKRGHAIIIYRGKNYT 681

Query: 880  RPLKLLPGNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKLRHLLRRNEEATRR 701
            RP   L  NLLTKR+AL+RSL +QR GSLKFFA QR++ +S+L++KL  L +R +E   R
Sbjct: 682  RPSVKLAKNLLTKRKALRRSLELQRFGSLKFFARQREQSVSELEQKLADLHQR-KEIELR 740

Query: 700  ESEN 689
            ESEN
Sbjct: 741  ESEN 744


>ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 802

 Score =  662 bits (1707), Expect = 0.0
 Identities = 378/738 (51%), Positives = 483/738 (65%), Gaps = 57/738 (7%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAMRK 2603
            +K PTAPWM+GPLLL  ++ LDLS+ +K K+          D  L+ KVSGGRGK+AM+ 
Sbjct: 74   IKGPTAPWMRGPLLLEPNQFLDLSKSRKKKDANFAKTQNPNDA-LSGKVSGGRGKKAMKM 132

Query: 2602 IVESITKLQEFH-XXXXXXXXXXXXXFRVPLERVCE--DVDSELE--------------- 2477
            I + I KLQE                F+ P   + E  DV  E+E               
Sbjct: 133  IYQGIDKLQETQIGEGTQVETDAKVEFQFPPGSLSEWGDVSYEIEEKNPYGEEDNVESLE 192

Query: 2476 --------------------ARVPWAARVERIVFGRMKKEKVVTKAELSLPETDLRRLRS 2357
                                 ++PW + V RIV+ RMKKEKVV  AE +L    L RLR 
Sbjct: 193  GVEFGVLSREGEGRGSRKIGVKMPWESEV-RIVYRRMKKEKVVMTAESNLDAMLLERLRG 251

Query: 2356 DAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNELAMLKFDLPLCRNMDRAQEIIEIKTGGL 2177
            +AA++ +WVKVKKAGVT+ VVD+I  +W+ NELAMLKFDLPLCRNMDRA+EI+E+KTGG 
Sbjct: 252  EAARIQKWVKVKKAGVTRTVVDQIHFIWKNNELAMLKFDLPLCRNMDRAREIVEMKTGGF 311

Query: 2176 VVWSKKESLVVYRGCNYDLTSKAFPKLHSRHASSVETFLSEVHLVKTEDNIAISNIGTKE 1997
            VVW K+ +LVVYRGC+Y L  K     H    S   +  +E ++ +T     +++ G+ E
Sbjct: 312  VVWMKQNALVVYRGCSYTLQQKELQ--HDFLCSHQNSSFTE-NIKQTSIFSPLNSSGSSE 368

Query: 1996 -IIVDGQNRVEDSLPTFVEENLALQSVNGTLYEREADRLLDGLGPRFVDWWYPKPLPVDA 1820
              ++   N  EDSL           ++N +LY REA+RLLD LGPR+VDWW+PKPLPV+A
Sbjct: 369  DEMISVGNSEEDSL-----------AMNESLYVREANRLLDDLGPRYVDWWWPKPLPVNA 417

Query: 1819 DLLPEVVRGFRTPLRRCPPHVRPTLTNDELTYLRKLARPLPTHFVLGRNTKLQGLASAII 1640
            DLLPEVV GF+ P R CPP  R  LT+DELT LRKLAR LPTHFVLGRN KLQGLA+A++
Sbjct: 418  DLLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQGLAAAVV 477

Query: 1639 KLWEKSLIVKIAVKWGIPNTNNEQMAWELK------------------RGKDFLPSTVAN 1514
            KLWEK  I KIA+KWGIPNT+NE MA ELK                  RGKDFLPS VAN
Sbjct: 478  KLWEKCHIAKIALKWGIPNTSNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVAN 537

Query: 1513 LVVDREKELKRCQLHEERARWKAIESFFVTDETVENTSTVGTFSEFQDIQTKYYGLFNNG 1334
            LV +RE EL RCQL EE AR+KAIE+  +T E   ++S+VGT SEFQ I           
Sbjct: 538  LVAEREVELTRCQLEEEVARFKAIETLPITMEVSMSSSSVGTLSEFQTIAEP-----GKE 592

Query: 1333 NTKIDVQFLAEKEGLEKELRKQERKLFLLKLKIERSAKELSKLNSEWRPAEESADQEMIT 1154
             ++++VQ ++EKE LEKELR Q+  L +LK KIE+S+  L KLN+ WRPA+E  D+E++T
Sbjct: 593  KSEVEVQLMSEKERLEKELRNQQNNLHILKKKIEKSSIALGKLNAAWRPAKEDDDKEILT 652

Query: 1153 EEERQCFHKIGLKMDKTLVLGRRGVFDGVIESMHQHWKHREVVKVITMQRMYSQVIQTXX 974
            +EER+   +IGLKMD++LVLGRRGVFDGV+  +HQHWKHREV+KVITMQ+++SQVI T  
Sbjct: 653  QEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQVIHTAK 712

Query: 973  XXXXXXXXXXXXXEKLQKGHAIVLYRGKNYRRPLKLLPGNLLTKREALQRSLGMQRIGSL 794
                         +K+++GHAI++YRGKNYRRP +L+P NLL KR+AL RSL MQR+GSL
Sbjct: 713  LLETESGGILISVDKIKEGHAIIIYRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRLGSL 771

Query: 793  KFFAYQRQRMISDLQRKL 740
            KF+A Q ++ ISDL+ KL
Sbjct: 772  KFYANQTEQAISDLKLKL 789


>ref|XP_002306656.2| hypothetical protein POPTR_0005s15420g [Populus trichocarpa]
            gi|550339039|gb|EEE93652.2| hypothetical protein
            POPTR_0005s15420g [Populus trichocarpa]
          Length = 729

 Score =  662 bits (1707), Expect = 0.0
 Identities = 375/712 (52%), Positives = 465/712 (65%), Gaps = 31/712 (4%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAMRK 2603
            +K+PT PW+KGPL+L   E+L+L+  K  K I+  D  EK D+ L  K SG RG +AM +
Sbjct: 68   VKVPTPPWIKGPLILQPHELLNLTNPKNKKPIKN-DKIEKDDKALTAKESGVRGNKAMIQ 126

Query: 2602 IVESITKLQEFHXXXXXXXXXXXXXFRVPLERVCED-VDSELEARVPWAARVERIVFGRM 2426
            IV+S+ +LQ                     + + E+ V    E ++PW  R ER+   RM
Sbjct: 127  IVKSVERLQRDENLKDT-------------QEISENGVLGFREKKLPWV-REERVGNWRM 172

Query: 2425 KKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNELAMLK 2246
            KKEKVV+KAELSL +  L RLR +AAKM  WVKVKKAGVTQ VVDEIR  WR +ELAM+K
Sbjct: 173  KKEKVVSKAELSLDKELLERLRGEAAKMRTWVKVKKAGVTQSVVDEIRLTWRTSELAMIK 232

Query: 2245 FDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRHASSVET 2066
            F +PLCRNM+RA++I+E  TGGLVVW++K+  VVYRGCNY                    
Sbjct: 233  FYMPLCRNMNRARDIVE--TGGLVVWTRKDIHVVYRGCNYQWKK---------------- 274

Query: 2065 FLSEVHLVKTEDNIAISNIGTKEIIVDGQNRVEDSLPTFVEENLALQSVNGTLYEREADR 1886
                             N  T  I                EENL  Q +NG+L+ERE DR
Sbjct: 275  -----------------NFNTATI----------------EENLNTQPINGSLFERETDR 301

Query: 1885 LLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLTNDELTYLRKLAR 1706
            LLDGLGPRFVDWW  KPLPVDADLLPEVV+GFR+P R CPP +R  L +DELTYLRKLA+
Sbjct: 302  LLDGLGPRFVDWWMRKPLPVDADLLPEVVKGFRSPSRLCPPRMRSKLKDDELTYLRKLAQ 361

Query: 1705 PLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMAWELK-------- 1550
             LPTHFVLGRN +LQGLA+AI+KLWEK++I KIAVKWG+PNTNNEQMA ELK        
Sbjct: 362  SLPTHFVLGRNRRLQGLAAAILKLWEKTIIAKIAVKWGVPNTNNEQMADELKAKIFLMLM 421

Query: 1549 ----------------------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIES 1436
                                  RGKDFLP  VAN++VDRE  L++CQ +EE AR KAIE+
Sbjct: 422  LYTQSLTGGVLLLRNKFFIILYRGKDFLPGQVANVIVDREIALRKCQTNEEGARMKAIET 481

Query: 1435 FFVTDETVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKL 1256
             ++      NTS  GT  EFQ+ Q K+           ++Q  A KE LE+ELR QE +L
Sbjct: 482  SYMPGGPT-NTSRCGTLYEFQEFQIKFQ---KTAKGDSEIQLEAYKEKLERELRNQEYRL 537

Query: 1255 FLLKLKIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVF 1076
             +LK KIE+ A++LSKLNS W P+   ADQ ++TEEER+CF KIGLK+  +LVLGRRGVF
Sbjct: 538  RILKSKIEKPARDLSKLNSAWVPSPRDADQGIMTEEERECFRKIGLKLRGSLVLGRRGVF 597

Query: 1075 DGVIESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYR 896
            +GV+E +HQHWKHREVVKVITMQR++SQVI T               +KL++GHAI++YR
Sbjct: 598  EGVMEGLHQHWKHREVVKVITMQRVFSQVIHTATLLEAESDGILVSVDKLKEGHAIIIYR 657

Query: 895  GKNYRRPLKLLPGNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKL 740
            GKNY+RPL+LL  NLLTKREAL+RSL +QR+GSLK+FA QR+R+ISDL+ KL
Sbjct: 658  GKNYKRPLRLLKKNLLTKREALKRSLLIQRVGSLKYFANQRERVISDLKLKL 709


>ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 764

 Score =  659 bits (1700), Expect = 0.0
 Identities = 370/723 (51%), Positives = 471/723 (65%), Gaps = 29/723 (4%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPL-LLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAMR 2606
            +K PT PW+K PL L P   +L+        N+ K D  +K    LN K   G  K+ +R
Sbjct: 54   IKSPTPPWIKSPLHLQPQQHLLN-------SNVEKSDLSDKA---LNSKEISG--KKVLR 101

Query: 2605 KIVESITKLQEFHXXXXXXXXXXXXXFRVPLERVCEDVDSELE-----ARVPWAARVERI 2441
            KI   + KL +                +V     C D+  E E      R+PW  + E+I
Sbjct: 102  KIAHKVEKLHKALDSEKNETLTQMGSEKVENFGDCLDILMENEEVVNKGRMPWE-KDEKI 160

Query: 2440 VFGRMKKEKVVTKAELSLPETDLRRLRSDAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNE 2261
             F ++K+EK  + A+L++ +  L RLR +AA+M +WVKVKK GVTQ VVDEI++ WR NE
Sbjct: 161  GFFKVKREKTFSAADLNVDKVVLHRLRGEAARMRKWVKVKKIGVTQDVVDEIKRSWRMNE 220

Query: 2260 LAMLKFDLPLCRNMDRAQEIIEIKTGGLVVWSKKESLVVYRGCNYDLTSKAFPKLHSRHA 2081
            LAM+KFD+PLC+NM RA+EI+E KTGGLV+W KK++LVVYRGCNY LTSK+ PK+H+ + 
Sbjct: 221  LAMVKFDIPLCQNMGRAREIVETKTGGLVIWCKKDTLVVYRGCNYQLTSKSSPKIHTGYI 280

Query: 2080 SSVETFLSEVHLVKTEDNIAISNIGTKEI---IVDGQNRVEDSLPTFVEENLALQSVNGT 1910
             S +T   E + VK+     +S + + +    I+      +DSL T    N+  Q  +G+
Sbjct: 281  RSQKTNSYETNEVKSATKGDLSRVESTQSSSEILSSNAEHKDSLSTD-NYNMNYQPRSGS 339

Query: 1909 LYEREADRLLDGLGPRFVDWWYPKPLPVDADLLPEVVRGFRTPLRRCPPHVRPTLTNDEL 1730
            LYE+E DRLLDGLGPRFVDWW  KPLPVDADLLPEVV GF  P R CPPH R  LT+DEL
Sbjct: 340  LYEKECDRLLDGLGPRFVDWWMDKPLPVDADLLPEVVPGFEPPFRLCPPHARSKLTDDEL 399

Query: 1729 TYLRKLARPLPTHFVLGRNTKLQGLASAIIKLWEKSLIVKIAVKWGIPNTNNEQMAWELK 1550
            TY RK++ PLPTHFVLGRN  LQGLA+AI+KLW+KS   KIA+K+G+PNT+NE MA ELK
Sbjct: 400  TYFRKISHPLPTHFVLGRNRGLQGLAAAILKLWQKSHTAKIAIKYGVPNTDNEVMANELK 459

Query: 1549 ------------------RGKDFLPSTVANLVVDREKELKRCQLHEERARWKAIESFFVT 1424
                              RGKDFLP  VA LV  RE ELK CQLHEE AR KAI++F   
Sbjct: 460  RLTGGVLLLRNKFYILLYRGKDFLPRRVAALVERRELELKSCQLHEEVARAKAIQAFSSF 519

Query: 1423 DE--TVENTSTVGTFSEFQDIQTKYYGLFNNGNTKIDVQFLAEKEGLEKELRKQERKLFL 1250
            DE    +  ST GT +EF  IQ K+  +    N   ++   AE   LEKEL++Q+ K F+
Sbjct: 520  DELQLPQEASTSGTLTEFMKIQMKFEDI-KEVNVDSNIALEAEIYRLEKELKEQQHKAFI 578

Query: 1249 LKLKIERSAKELSKLNSEWRPAEESADQEMITEEERQCFHKIGLKMDKTLVLGRRGVFDG 1070
            L  KIERSA ELSKLN+ W PA E  D E++T+EER+CF K+GLKM   LVLGRRG+FDG
Sbjct: 579  LNKKIERSAMELSKLNAVWTPAGEDIDLEIMTDEERECFRKMGLKMRSCLVLGRRGIFDG 638

Query: 1069 VIESMHQHWKHREVVKVITMQRMYSQVIQTXXXXXXXXXXXXXXXEKLQKGHAIVLYRGK 890
            V+E +HQ+WKHRE+ KVITMQR+ SQVI T               +KL++GHAI++YRGK
Sbjct: 639  VLEGLHQYWKHREIAKVITMQRLLSQVIYTSQFLERESGGILVSVDKLKEGHAIIIYRGK 698

Query: 889  NYRRPLKLLPGNLLTKREALQRSLGMQRIGSLKFFAYQRQRMISDLQRKLRHLLRRNEEA 710
            NY RP + +  NLLTKR+AL+RSL MQRIGSLKFFAYQR++ IS+L+ KL  L  R E  
Sbjct: 699  NYSRPSQKIAKNLLTKRKALRRSLEMQRIGSLKFFAYQREKTISNLKLKLETLQHRKEIE 758

Query: 709  TRR 701
             R+
Sbjct: 759  ARK 761


>ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 766

 Score =  640 bits (1650), Expect = e-180
 Identities = 369/737 (50%), Positives = 467/737 (63%), Gaps = 56/737 (7%)
 Frame = -3

Query: 2782 LKMPTAPWMKGPLLLPSSEVLDLSRIKKTKNIRKVDYDEKIDRNLNDKVSGGRGKQAMRK 2603
            +K PTAPWM+GPLLL  ++VLDLS+ +K K+          D  L+ KVSGGRGK+AM+ 
Sbjct: 74   IKGPTAPWMRGPLLLEPNQVLDLSKSRKKKDTNFAKTQNPNDA-LSGKVSGGRGKKAMKM 132

Query: 2602 IVESITKLQ----------------EFHXXXXXXXXXXXXXFRVPLERVCEDVDS--ELE 2477
            I + I KLQ                EF              + +  +    + D+   LE
Sbjct: 133  IYQGIDKLQETQIGECTQVETDVKVEFQFPPGSLSGWGDVSYEIEEKNPYGEEDNVESLE 192

Query: 2476 --------------------ARVPWAARVERIVFGRMKKEKVVTKAELSLPETDLRRLRS 2357
                                AR+PW +  ERIV+ RMKKEKVV  AE +L    L RLR 
Sbjct: 193  GVEFGVLSREGEGRGSRKSGARMPWESE-ERIVYRRMKKEKVVRTAESNLDAMLLERLRG 251

Query: 2356 DAAKMTQWVKVKKAGVTQVVVDEIRKVWRKNELAMLKFDLPLCRNMDRAQEIIEIKTGGL 2177
            +AA++ +WVKVKKAGVT+ VVD+I+ +W+ NELAMLKFDLPLCRNMDRA++I+E+KTGG 
Sbjct: 252  EAARIQKWVKVKKAGVTRTVVDQIQFIWKNNELAMLKFDLPLCRNMDRARDIVEMKTGGF 311

Query: 2176 VVWSKKESLVVYRGCNYDLTSKAFPKLHSRHASSVETFLSEVHLVKTEDNIAISNIGTKE 1997
            VVW K+ +LVVYRG  Y++ S                                  +G  E
Sbjct: 312  VVWMKQNALVVYRG--YEMIS----------------------------------VGNSE 335

Query: 1996 IIVDGQNRVEDSLPTFVEENLALQSVNGTLYEREADRLLDGLGPRFVDWWYPKPLPVDAD 1817
                     EDSL            +N +LYEREA+RLLD LGPR+VDWW+PKPLPVDAD
Sbjct: 336  ---------EDSLV-----------MNESLYEREANRLLDDLGPRYVDWWWPKPLPVDAD 375

Query: 1816 LLPEVVRGFRTPLRRCPPHVRPTLTNDELTYLRKLARPLPTHFVLGRNTKLQGLASAIIK 1637
            LLPEVV GF+ P R CPP  R  LT+DELT LRKLAR LPTHFVLGRN KLQGLA+A++K
Sbjct: 376  LLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQGLAAALVK 435

Query: 1636 LWEKSLIVKIAVKWGIPNTNNEQMAWELK------------------RGKDFLPSTVANL 1511
            LWEK  I KIA+KWGIPN +NE MA ELK                  RGKDFLPS VA L
Sbjct: 436  LWEKCHIAKIALKWGIPNASNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVAKL 495

Query: 1510 VVDREKELKRCQLHEERARWKAIESFFVTDETVENTSTVGTFSEFQDIQTKYYGLFNNGN 1331
            V +RE EL RCQL EE AR+KAIE+  +T E   ++S VGT SEFQ I            
Sbjct: 496  VAEREVELTRCQLEEEVARFKAIETLPITMEASMSSSIVGTLSEFQTIAEP-----GKEK 550

Query: 1330 TKIDVQFLAEKEGLEKELRKQERKLFLLKLKIERSAKELSKLNSEWRPAEESADQEMITE 1151
            ++++VQ ++EKE LEKE+R Q+  L++LK KIE+S+  L KLN+ WRPA+E  D+E++T+
Sbjct: 551  SEVEVQLMSEKERLEKEVRNQQDSLYILKKKIEKSSIALGKLNAAWRPAKEDDDKEILTQ 610

Query: 1150 EERQCFHKIGLKMDKTLVLGRRGVFDGVIESMHQHWKHREVVKVITMQRMYSQVIQTXXX 971
            EER+   +IGLKMD++LVLGRRGVFDGV+  +HQHWKHREV+KVITMQ+++SQVI T   
Sbjct: 611  EERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQVIHTAKL 670

Query: 970  XXXXXXXXXXXXEKLQKGHAIVLYRGKNYRRPLKLLPGNLLTKREALQRSLGMQRIGSLK 791
                        +K+++GHAI++YRGKNYRRP +L+P NLL KR+AL RSL MQR+GSLK
Sbjct: 671  LETESGGILISVDKIKEGHAIIIYRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRLGSLK 729

Query: 790  FFAYQRQRMISDLQRKL 740
            F+A Q ++ ISDL+ KL
Sbjct: 730  FYANQTEQAISDLKLKL 746