BLASTX nr result
ID: Akebia26_contig00013658
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00013658
(2263 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g... 566 0.0
emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera] 569 0.0
ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citr... 529 0.0
ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g... 527 0.0
ref|XP_007033279.1| RNA-binding KH domain-containing protein iso... 520 e-175
ref|XP_007033276.1| RNA-binding KH domain-containing protein iso... 520 e-175
ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g... 483 e-163
ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g... 491 e-157
ref|XP_007033280.1| RNA-binding KH domain-containing protein iso... 520 e-157
ref|XP_007033277.1| RNA-binding KH domain-containing protein iso... 520 e-157
ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g... 485 e-156
ref|XP_007217649.1| hypothetical protein PRUPE_ppa027198mg, part... 509 e-153
ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citr... 529 e-149
ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus ... 514 e-148
ref|XP_006383459.1| hypothetical protein POPTR_0005s15690g [Popu... 498 e-140
gb|AEV43362.1| poly C-binding protein [Citrus sinensis] 464 e-127
ref|XP_007033281.1| RNA-binding KH domain-containing protein iso... 334 e-120
ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g... 385 e-104
gb|AAP54423.2| KH domain containing protein, expressed [Oryza sa... 380 e-102
ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] g... 380 e-102
>ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera] gi|296087281|emb|CBI33655.3| unnamed protein
product [Vitis vinifera]
Length = 676
Score = 567 bits (1460), Expect(2) = 0.0
Identities = 299/496 (60%), Positives = 359/496 (72%), Gaps = 3/496 (0%)
Frame = -1
Query: 2095 KSSSYRKQFRLPFENNVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXXXXXXXX 1916
+ S++K+ F+ NK+ + +N +++Q DTVYRILCP
Sbjct: 5 RRGSFKKRPNFQFKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGKGG 64
Query: 1915 XXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXXXXXDLQ 1736
KALREET AKI V +SVPG+DERV+II+S+ T+ P +++N
Sbjct: 65 GIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHDSN---------------- 108
Query: 1735 NDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTARLLVPSN 1556
+ P +E + M+PHCPAQDAL+KVH+RI E+D L+GGT ED++E+ +VTARLLVP+N
Sbjct: 109 -EDPEMEEEQDHMEPHCPAQDALMKVHERIIEED-LFGGTEFEDDNENTVVTARLLVPNN 166
Query: 1555 QVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKKALYEVS 1376
VGCLLGK G VIQ+LRSETGANIRVLPAEHLP CAMS+DELVQISG ++ KKALYEVS
Sbjct: 167 MVGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVS 226
Query: 1375 TLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTPPMPWFG 1205
TLLHQNPR PP ++P S GGQGFHPPG M +M P NPMWS+RNS +G PPMPW G
Sbjct: 227 TLLHQNPRKDKPPSSFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMG 286
Query: 1204 GYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQIQQETGA 1025
GY S+ S G+AS EF+MKILCPA KIG VIGKGG NV+Q+QQETGA
Sbjct: 287 GYRSQPS-VVPGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGA 345
Query: 1024 NIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTRLLVSSS 845
+IHV+D E++ERVI VS+FEA WNPRS TIEAILQLQN T+E SDKG +TTRLLV SS
Sbjct: 346 SIHVEDALAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSS 405
Query: 844 KVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARGALSEIA 665
KVGCILGQGGH+I EMRRRTQADIRV SK+ KP+CAS+DEELVQISGNF VA+ AL+EIA
Sbjct: 406 KVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIA 465
Query: 664 SRLRVRSLEGVNAAPE 617
SRLRVR L N E
Sbjct: 466 SRLRVRCLRDANGGVE 481
Score = 154 bits (388), Expect(2) = 0.0
Identities = 89/193 (46%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Frame = -3
Query: 599 GMPPS-GMIGAGSSGGYEHVKGGGHKYEAPTYPMQATATRFPNINGSMEVKIPNSAVGSF 423
G+P S G +GAGSSGG+E KGGG +YE +YP+ AT + N+N SME KIPN++V S
Sbjct: 500 GLPSSSGALGAGSSGGFELSKGGGLEYEPQSYPVPPAATGYHNVNSSMESKIPNNSVSSV 559
Query: 422 LGAGGSNISNIGQMSGARVKLNDPQSSGSECVVEIHGSSEQMKAAQNLLQSFIASAVQNF 243
+G GG N++N+ +M+GARVKL DPQS GSECVVEI GSSE + AAQ++LQ+F+ASA
Sbjct: 560 IGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRGSSEHLTAAQSILQAFMASAGA-- 617
Query: 242 NAHQQQSPYSSAVQSFNAHQQHNPYTSAAHNFTQQQQSPYTAASAQNFTXXXXQDPYASA 63
Q +P + Q+ +AH Q PY N Q PY + +A A+A
Sbjct: 618 -GGQNMNPQQGSYQNMSAHPQ-APY----QNMNAPPQVPYQSMNA--------PPQQAAA 663
Query: 62 GQNFNTQQQHDPY 24
N + QQ Y
Sbjct: 664 YPNMSAQQSSYQY 676
Score = 97.1 bits (240), Expect = 3e-17
Identities = 95/380 (25%), Positives = 147/380 (38%), Gaps = 3/380 (0%)
Frame = -1
Query: 1966 RILCPXXXXXXXXXXXXXXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNT 1787
+ILCP K L++ET A I V +++ ++ERV+ + S
Sbjct: 317 KILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSFEAL------- 369
Query: 1786 NXXXXXXXXXXXXXDLQNDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHE 1607
P +A+L++ ++ +E + G
Sbjct: 370 -----------------------------WNPRSQTIEAILQLQNKTSEYSDKGG----- 395
Query: 1606 DNDEDDIVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELV 1427
+T RLLVPS++VGC+LG+GGHVI ++R T A+IRV E P CA +ELV
Sbjct: 396 -------MTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELV 448
Query: 1426 QISGTSSITKKALYEVSTLLHQNPRPPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHR 1247
QISG + K AL E+++ L N GG P GP P + P
Sbjct: 449 QISGNFGVAKDALAEIASRLRVRCLRDAN-----GGVEPAPVGPVPGFGHPGKLPGGLPS 503
Query: 1246 NSGFRGTPPMPWFG---GYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIV 1076
+SG G F G G E+ +S E + P + V
Sbjct: 504 SSGALGAGSSGGFELSKGGGLEYEPQSYPVPPAATGYHNVNSSMESKI----PNNSVSSV 559
Query: 1075 IGKGGSNVRQIQQETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTN 896
IG GG NV + + GA + + D P+S E +++++ S+
Sbjct: 560 IGMGGGNVANMSEMAGARVKLQD--------------------PQSGGSECVVEIRGSSE 599
Query: 895 EISDKGSITTRLLVSSSKVG 836
++ SI + S+ G
Sbjct: 600 HLTAAQSILQAFMASAGAGG 619
>emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 569 bits (1467), Expect(2) = 0.0
Identities = 300/496 (60%), Positives = 359/496 (72%), Gaps = 3/496 (0%)
Frame = -1
Query: 2095 KSSSYRKQFRLPFENNVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXXXXXXXX 1916
+ S++K+ F+ NK+ + +N +++Q DTVYRILCP
Sbjct: 33 RRGSFKKRPNFQFKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGKGG 92
Query: 1915 XXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXXXXXDLQ 1736
KALREET AKI V +SVPG+DERV+II+S+ T+ P +N+N
Sbjct: 93 GIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHNSN---------------- 136
Query: 1735 NDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTARLLVPSN 1556
+ P +E + M+PHCPAQDAL+KVH+RI E+D L+GGT ED++E+ +VTARLLVP+N
Sbjct: 137 -EDPEREEEQDHMEPHCPAQDALMKVHERIIEED-LFGGTEFEDDNENTVVTARLLVPNN 194
Query: 1555 QVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKKALYEVS 1376
VGCLLGK G VIQ+LRSETGANIRVLPAEHLP CAMS+DELVQISG ++ KKALYEVS
Sbjct: 195 MVGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVS 254
Query: 1375 TLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTPPMPWFG 1205
TLLHQNPR PP ++P S GGQGFHPPG M +M P NPMWS+RNS +G PPMPW G
Sbjct: 255 TLLHQNPRKDKPPSSFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMG 314
Query: 1204 GYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQIQQETGA 1025
GY S+ S G+AS EF+MKILCPA KIG VIGKGG NV+Q+QQETGA
Sbjct: 315 GYRSQPS-VVPGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGA 373
Query: 1024 NIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTRLLVSSS 845
+IHV+D E++ERVI VS+FEA WNPRS TIEAILQLQN T+E SDKG +TTRLLV SS
Sbjct: 374 SIHVEDALAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSS 433
Query: 844 KVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARGALSEIA 665
KVGCILGQGGH+I EMRRRTQADIRV SK+ KP+CAS+DEELVQISGNF VA+ AL+EIA
Sbjct: 434 KVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIA 493
Query: 664 SRLRVRSLEGVNAAPE 617
SRLRVR L N E
Sbjct: 494 SRLRVRCLRDANGGVE 509
Score = 150 bits (378), Expect(2) = 0.0
Identities = 76/141 (53%), Positives = 101/141 (71%), Gaps = 1/141 (0%)
Frame = -3
Query: 599 GMPPS-GMIGAGSSGGYEHVKGGGHKYEAPTYPMQATATRFPNINGSMEVKIPNSAVGSF 423
G+P S G +GAGSSGG+E KGGG +YE +YP+ AT + N+N SME KIPN++V S
Sbjct: 528 GLPSSSGALGAGSSGGFELSKGGGLEYEPQSYPVPPAATGYHNVNSSMESKIPNNSVSSV 587
Query: 422 LGAGGSNISNIGQMSGARVKLNDPQSSGSECVVEIHGSSEQMKAAQNLLQSFIASAVQNF 243
+G GG N++N+ +M+GARVKL DPQS GSECVVEI GSSE + AAQ++LQ+F+ASA
Sbjct: 588 IGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRGSSEHLTAAQSILQAFMASAGA-- 645
Query: 242 NAHQQQSPYSSAVQSFNAHQQ 180
Q +P + Q+ +AH Q
Sbjct: 646 -GGQNMNPQQGSYQNMSAHPQ 665
Score = 97.1 bits (240), Expect = 3e-17
Identities = 95/380 (25%), Positives = 147/380 (38%), Gaps = 3/380 (0%)
Frame = -1
Query: 1966 RILCPXXXXXXXXXXXXXXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNT 1787
+ILCP K L++ET A I V +++ ++ERV+ + S
Sbjct: 345 KILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSFEAL------- 397
Query: 1786 NXXXXXXXXXXXXXDLQNDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHE 1607
P +A+L++ ++ +E + G
Sbjct: 398 -----------------------------WNPRSQTIEAILQLQNKTSEYSDKGG----- 423
Query: 1606 DNDEDDIVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELV 1427
+T RLLVPS++VGC+LG+GGHVI ++R T A+IRV E P CA +ELV
Sbjct: 424 -------MTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELV 476
Query: 1426 QISGTSSITKKALYEVSTLLHQNPRPPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHR 1247
QISG + K AL E+++ L N GG P GP P + P
Sbjct: 477 QISGNFGVAKDALAEIASRLRVRCLRDAN-----GGVEPAPVGPVPGFGHPGKLPGGLPS 531
Query: 1246 NSGFRGTPPMPWFG---GYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIV 1076
+SG G F G G E+ +S E + P + V
Sbjct: 532 SSGALGAGSSGGFELSKGGGLEYEPQSYPVPPAATGYHNVNSSMESKI----PNNSVSSV 587
Query: 1075 IGKGGSNVRQIQQETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTN 896
IG GG NV + + GA + + D P+S E +++++ S+
Sbjct: 588 IGMGGGNVANMSEMAGARVKLQD--------------------PQSGGSECVVEIRGSSE 627
Query: 895 EISDKGSITTRLLVSSSKVG 836
++ SI + S+ G
Sbjct: 628 HLTAAQSILQAFMASAGAGG 647
>ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
gi|557532838|gb|ESR44021.1| hypothetical protein
CICLE_v10011187mg [Citrus clementina]
Length = 710
Score = 529 bits (1362), Expect(2) = 0.0
Identities = 287/502 (57%), Positives = 339/502 (67%), Gaps = 3/502 (0%)
Frame = -1
Query: 2113 MGKNKRKSSSYRKQFRLPFENNVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXX 1934
M +KR R + + VG KK N + +Q DTVYRILCP
Sbjct: 1 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60
Query: 1933 XXXXXXXXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXX 1754
K+LREET AKI V +++PG++ERV+II+SS T+ N
Sbjct: 61 VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN------------ 108
Query: 1753 XXXDLQNDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTAR 1574
++D + E M+PHC AQDALLKVHDRI E+D L+GG +D++E+ VTAR
Sbjct: 109 -----KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED-LFGGMASDDDNENSTVTAR 162
Query: 1573 LLVPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKK 1394
LLVP+N VGCLLGK G VIQ+LRSETGANIRVLPA+ LP CAM+TDELVQISG ++ K+
Sbjct: 163 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKR 222
Query: 1393 ALYEVSTLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTP 1223
ALYEVSTLLHQNPR PP ++P + GGQ FH P PMADM P N W RNS G P
Sbjct: 223 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 282
Query: 1222 PMPWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQI 1043
PW GGYG + SR G+ SAEF+MKILC A KIG VIGKGG NV+Q+
Sbjct: 283 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 342
Query: 1042 QQETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTR 863
QQETGA+IHV+D ++DERVI SAFE WNPRS TI+AILQLQN T+E S+KG+ITTR
Sbjct: 343 QQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTR 402
Query: 862 LLVSSSKVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARG 683
LLV SSKVGCILGQGGH+I EMRRRTQADIRV SKD KP+CASEDEELVQISGNF VA+
Sbjct: 403 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKD 462
Query: 682 ALSEIASRLRVRSLEGVNAAPE 617
AL+EIASRLR R+L N E
Sbjct: 463 ALTEIASRLRARTLRDANVGAE 484
Score = 144 bits (364), Expect(2) = 0.0
Identities = 82/195 (42%), Positives = 114/195 (58%), Gaps = 3/195 (1%)
Frame = -3
Query: 602 RGMPPSGMIGAGSSGGYEHVKGGGHKYEAPTYPMQATATRFPNINGSMEVKIPNSAVGSF 423
RG PSG +GAG SGGYE +GG + YE +YP +A +PN+N + E +IPN AVGS
Sbjct: 503 RGPLPSGPVGAGISGGYEPFRGG-YDYEPQSYPPPPSAMGYPNMNSAFEARIPNKAVGSV 561
Query: 422 LGAGGSNISNIGQMSGARVKLNDPQSSGSECVVEIHGSSEQMKAAQNLLQSFIASAVQ-- 249
+G GGSNI N+G+++GARVKL DP SEC+V+I GSSE + +A QSF+ S
Sbjct: 562 MGTGGSNIPNVGEVAGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMK 621
Query: 248 -NFNAHQQQSPYSSAVQSFNAHQQHNPYTSAAHNFTQQQQSPYTAASAQNFTXXXXQDPY 72
+++Q +P S+ Q+ ++HQ +++ QQSPY + +AQ PY
Sbjct: 622 VQPSSYQNINPQQSSYQTMSSHQ-------SSYQNMNTQQSPYHSVNAQQ-------SPY 667
Query: 71 ASAGQNFNTQQQHDP 27
QN N QQ P
Sbjct: 668 ----QNINPQQSSYP 678
>ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g18375 [Citrus sinensis]
Length = 715
Score = 527 bits (1357), Expect(2) = 0.0
Identities = 287/502 (57%), Positives = 339/502 (67%), Gaps = 3/502 (0%)
Frame = -1
Query: 2113 MGKNKRKSSSYRKQFRLPFENNVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXX 1934
M +KR R + + VG KK N + +Q DTVYRILCP
Sbjct: 1 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60
Query: 1933 XXXXXXXXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXX 1754
K+LREET AKI V +++PG++ERV+II+SS T+ N
Sbjct: 61 VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKKVN------------ 108
Query: 1753 XXXDLQNDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTAR 1574
++D + E M+PHC AQDALLKVHDRI E+D L+GG +D++E+ VTAR
Sbjct: 109 -----KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED-LFGGMASDDDNENSTVTAR 162
Query: 1573 LLVPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKK 1394
LLVP+N VGCLLGK G VIQ+LRSETGANIRVLPA+ LP CAM+TDELVQISG ++ K+
Sbjct: 163 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKR 222
Query: 1393 ALYEVSTLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTP 1223
ALYEVSTLLHQNPR PP ++P + GGQ FH P PMADM P N W RNS G P
Sbjct: 223 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 282
Query: 1222 PMPWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQI 1043
PW GGYG + SR G+ SAEF+MKILC A KIG VIGKGG NV+Q+
Sbjct: 283 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 342
Query: 1042 QQETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTR 863
QQETGA+IHV+D ++DERVI SAFE WNPRS TI+AILQLQN T+E S+KG+ITTR
Sbjct: 343 QQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTR 402
Query: 862 LLVSSSKVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARG 683
LLV SSKVGCILGQGGH+I EMRRRTQADIRV SKD KP+CASEDEELVQISGNF VA+
Sbjct: 403 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKD 462
Query: 682 ALSEIASRLRVRSLEGVNAAPE 617
AL+EIASRLR R+L N E
Sbjct: 463 ALTEIASRLRARTLRDANVGAE 484
Score = 139 bits (351), Expect(2) = 0.0
Identities = 83/200 (41%), Positives = 114/200 (57%), Gaps = 8/200 (4%)
Frame = -3
Query: 602 RGMPPSGMIGAGSSGGYEHVKGGGHKYEAPTYPMQATA-----TRFPNINGSMEVKIPNS 438
RG PSG +GAG SGGYE +GG + YE +YP +A T +PN+N + E +IPN
Sbjct: 503 RGPLPSGPVGAGISGGYEPFRGG-YDYEPQSYPPPPSAPPPSATGYPNMNSAFEARIPNK 561
Query: 437 AVGSFLGAGGSNISNIGQMSGARVKLNDPQSSGSECVVEIHGSSEQMKAAQNLLQSFIAS 258
AVGS +G GGSNI N+G++ GARVKL DP SEC+V+I GSSE + +A QSF+ S
Sbjct: 562 AVGSVMGTGGSNIPNVGEVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS 621
Query: 257 AVQ---NFNAHQQQSPYSSAVQSFNAHQQHNPYTSAAHNFTQQQQSPYTAASAQNFTXXX 87
+++Q +P S+ Q+ ++HQ +++ QQSPY + +AQ
Sbjct: 622 GQSMKVQPSSYQNINPQQSSYQTMSSHQ-------SSYQNMNTQQSPYHSVNAQQ----- 669
Query: 86 XQDPYASAGQNFNTQQQHDP 27
PY QN N QQ P
Sbjct: 670 --SPY----QNINPQQSSYP 683
>ref|XP_007033279.1| RNA-binding KH domain-containing protein isoform 4 [Theobroma cacao]
gi|508712308|gb|EOY04205.1| RNA-binding KH
domain-containing protein isoform 4 [Theobroma cacao]
Length = 706
Score = 520 bits (1338), Expect(2) = e-175
Identities = 291/502 (57%), Positives = 341/502 (67%), Gaps = 8/502 (1%)
Frame = -1
Query: 2098 RKSSSYRKQFRLPFENNVGNKKTKRH---NFNYDQGVVTPNNDDTVYRILCPXXXXXXXX 1928
RK + +K PF+ N K N ++Q N+ DTVYR+LCP
Sbjct: 4 RKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIGGVI 63
Query: 1927 XXXXXXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXXXX 1748
KALREET AKI VG+SV G DERV+II+SS + T N+
Sbjct: 64 GKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNS-------------- 109
Query: 1747 XDLQNDVPTEN--DEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTAR 1574
D EN DE M+P C AQDALLKVHD+IAEDD L+GG +D++ + +VTAR
Sbjct: 110 ---DEDSRGENKKDEVVVMEPCCAAQDALLKVHDQIAEDD-LFGGMALDDDNGNTVVTAR 165
Query: 1573 LLVPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKK 1394
LLVP+N VGCLLGK G VIQ+LRSETGA+IR+LPA+HLPACAM+TDELVQISG + K+
Sbjct: 166 LLVPNNMVGCLLGKRGDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKR 225
Query: 1393 ALYEVSTLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTP 1223
ALYEVSTLLHQNPR PP+++P GQ F PP +P NPMWSHRNS P
Sbjct: 226 ALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPPSA-----IPPSNPMWSHRNSSPHDIP 280
Query: 1222 PMPWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQI 1043
MPW +G+ S +ASAEF+MKILCPA KIG VIGKGG NV+Q+
Sbjct: 281 SMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQL 340
Query: 1042 QQETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTR 863
QQETGA IHV+D T E+DERVI VSA E WNPRS TI+AILQLQN T+E S+KG++TTR
Sbjct: 341 QQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTR 400
Query: 862 LLVSSSKVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARG 683
LLV SSKVGCILGQGGH+I EMRRRTQADIRV SKD KP+CASEDEELVQISGNF VA+
Sbjct: 401 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKD 460
Query: 682 ALSEIASRLRVRSLEGVNAAPE 617
AL+EIASRLRVR+L VNA E
Sbjct: 461 ALAEIASRLRVRTLRDVNAGAE 482
Score = 126 bits (317), Expect(2) = e-175
Identities = 75/185 (40%), Positives = 103/185 (55%), Gaps = 20/185 (10%)
Frame = -3
Query: 599 GMPPSGMIGAGSSGGYEHVKGGGHKYEAP--TYPMQATATRFPNINGSMEVKIPNSAVGS 426
G+PP+ IG G SGGYE +GGG + P Y + A R+ N+NG++E KI N+ S
Sbjct: 501 GLPPAAAIGPGRSGGYESFRGGGGREYEPQNNYSVPPAAVRYSNMNGALEAKILNNMSSS 560
Query: 425 FLGAGGSNISNIGQMSGARVKLNDPQSSGSECVVEIHGSSEQMKAAQNLLQSFIASAVQN 246
G GGS I N Q+SGARV+L DPQ+ GSE E GSSE + AAQ++ QSF+ S+ Q+
Sbjct: 561 VTGTGGSTILNT-QVSGARVRLEDPQTGGSE---EFRGSSEHLTAAQSIFQSFMPSSGQS 616
Query: 245 FNAHQ------------------QQSPYSSAVQSFNAHQQHNPYTSAAHNFTQQQQSPYT 120
NA Q Q+SPY + + +Q +P+ S+ + QQSPY+
Sbjct: 617 MNAQQSSYQNLSVQQSSYLNMNAQRSPYPNMNAQQSPYQNRHPHQSSPYQNLSVQQSPYS 676
Query: 119 AASAQ 105
S Q
Sbjct: 677 VTSQQ 681
>ref|XP_007033276.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma cacao]
gi|590652914|ref|XP_007033278.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
gi|508712305|gb|EOY04202.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
gi|508712307|gb|EOY04204.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
Length = 706
Score = 520 bits (1338), Expect(2) = e-175
Identities = 291/502 (57%), Positives = 341/502 (67%), Gaps = 8/502 (1%)
Frame = -1
Query: 2098 RKSSSYRKQFRLPFENNVGNKKTKRH---NFNYDQGVVTPNNDDTVYRILCPXXXXXXXX 1928
RK + +K PF+ N K N ++Q N+ DTVYR+LCP
Sbjct: 4 RKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIGGVI 63
Query: 1927 XXXXXXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXXXX 1748
KALREET AKI VG+SV G DERV+II+SS + T N+
Sbjct: 64 GKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNS-------------- 109
Query: 1747 XDLQNDVPTEN--DEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTAR 1574
D EN DE M+P C AQDALLKVHD+IAEDD L+GG +D++ + +VTAR
Sbjct: 110 ---DEDSRGENKKDEVVVMEPCCAAQDALLKVHDQIAEDD-LFGGMALDDDNGNTVVTAR 165
Query: 1573 LLVPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKK 1394
LLVP+N VGCLLGK G VIQ+LRSETGA+IR+LPA+HLPACAM+TDELVQISG + K+
Sbjct: 166 LLVPNNMVGCLLGKRGDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKR 225
Query: 1393 ALYEVSTLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTP 1223
ALYEVSTLLHQNPR PP+++P GQ F PP +P NPMWSHRNS P
Sbjct: 226 ALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPPSA-----IPPSNPMWSHRNSSPHDIP 280
Query: 1222 PMPWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQI 1043
MPW +G+ S +ASAEF+MKILCPA KIG VIGKGG NV+Q+
Sbjct: 281 SMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQL 340
Query: 1042 QQETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTR 863
QQETGA IHV+D T E+DERVI VSA E WNPRS TI+AILQLQN T+E S+KG++TTR
Sbjct: 341 QQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTR 400
Query: 862 LLVSSSKVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARG 683
LLV SSKVGCILGQGGH+I EMRRRTQADIRV SKD KP+CASEDEELVQISGNF VA+
Sbjct: 401 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKD 460
Query: 682 ALSEIASRLRVRSLEGVNAAPE 617
AL+EIASRLRVR+L VNA E
Sbjct: 461 ALAEIASRLRVRTLRDVNAGAE 482
Score = 125 bits (315), Expect(2) = e-175
Identities = 74/185 (40%), Positives = 103/185 (55%), Gaps = 20/185 (10%)
Frame = -3
Query: 599 GMPPSGMIGAGSSGGYEHVKGGGHKYEAP--TYPMQATATRFPNINGSMEVKIPNSAVGS 426
G+PP+ IG G SGGYE +GGG + P Y + A R+ N+NG++E KI N+ S
Sbjct: 501 GLPPAAAIGPGRSGGYESFRGGGGREYEPQNNYSVPPAAVRYSNMNGALEAKILNNMSSS 560
Query: 425 FLGAGGSNISNIGQMSGARVKLNDPQSSGSECVVEIHGSSEQMKAAQNLLQSFIASAVQN 246
G GGS I N ++SGARV+L DPQ+ GSE E GSSE + AAQ++ QSF+ S+ Q+
Sbjct: 561 VTGTGGSTILN-SEVSGARVRLEDPQTGGSE---EFRGSSEHLTAAQSIFQSFMPSSGQS 616
Query: 245 FNAHQ------------------QQSPYSSAVQSFNAHQQHNPYTSAAHNFTQQQQSPYT 120
NA Q Q+SPY + + +Q +P+ S+ + QQSPY+
Sbjct: 617 MNAQQSSYQNLSVQQSSYLNMNAQRSPYPNMNAQQSPYQNRHPHQSSPYQNLSVQQSPYS 676
Query: 119 AASAQ 105
S Q
Sbjct: 677 VTSQQ 681
>ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
vesca subsp. vesca]
Length = 760
Score = 483 bits (1242), Expect(2) = e-163
Identities = 276/502 (54%), Positives = 330/502 (65%), Gaps = 3/502 (0%)
Frame = -1
Query: 2113 MGKNKRKSSSYRKQFRLPFENNVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXX 1934
M NKR S R + + + N+K +N N +Q + +TVYRILCP
Sbjct: 1 MDWNKRNVLSQRPTVQFKRKGS-SNQKGNLNNSNREQSSGNAQSLETVYRILCPSKKIGG 59
Query: 1933 XXXXXXXXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXX 1754
K+LREET +KI V +SVPG+DERV+IIFS T+ N++
Sbjct: 60 VIGKGGGIIKSLREETRSKITVSDSVPGSDERVIIIFSPPTKISRKQNSDEDSH------ 113
Query: 1753 XXXDLQNDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTAR 1574
+ DE + ++PHC AQDALLKVHDRI E+D LY G +D++E+ +VT R
Sbjct: 114 -----------KADEQKPLEPHCAAQDALLKVHDRIVEED-LYDGVTFDDDNENIVVT-R 160
Query: 1573 LLVPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKK 1394
LLVP+N VGCLLGK G VIQ+LRSET ANIRVLPA+ LP CAM TDELVQISG + KK
Sbjct: 161 LLVPNNLVGCLLGKRGDVIQRLRSETRANIRVLPADQLPTCAMDTDELVQISGKPDVAKK 220
Query: 1393 ALYEVSTLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTP 1223
ALYEVSTLLHQNPR PP+ GGQGFH G P +M P NP+W +R G P
Sbjct: 221 ALYEVSTLLHQNPRKDKPPLGLAIPFGGQGFHLRGAP--NMFPPGNPIWPNREPS-HGMP 277
Query: 1222 PMPWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQI 1043
PMPW G + S +ASAEF +KILC A KIG VIGKGG NV+Q+
Sbjct: 278 PMPWIGECENHSSGYGRGGFDGDPAGHGVEASAEFFIKILCSAGKIGGVIGKGGFNVKQL 337
Query: 1042 QQETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTR 863
Q+ETGANIHV D + +++ERVI VSAFE PRS TIEAILQLQN +E+SDKG+ITTR
Sbjct: 338 QEETGANIHVQDASTDSEERVIRVSAFEVLRIPRSQTIEAILQLQNKASELSDKGTITTR 397
Query: 862 LLVSSSKVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARG 683
LLV SSKVGCILGQGG +I EMRRRTQADIRV SKD +P+CA EDEELVQISGNF VA+
Sbjct: 398 LLVPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDDRPKCADEDEELVQISGNFAVAKD 457
Query: 682 ALSEIASRLRVRSLEGVNAAPE 617
AL+EI SRLR+R+L NA E
Sbjct: 458 ALAEITSRLRIRTLRDTNAGEE 479
Score = 122 bits (306), Expect(2) = e-163
Identities = 75/197 (38%), Positives = 113/197 (57%), Gaps = 4/197 (2%)
Frame = -3
Query: 602 RGMPPS-GMIGAGSSGGYEHVKGGGHKYEAPTYPMQATATRFPNINGSMEVKIPNSAVGS 426
+GMPP + AGSSG Y+H+K G H+YE YP+ A+ + +N +++ +IPN+AVGS
Sbjct: 498 KGMPPPLSAVRAGSSGRYDHLKVGRHEYEPEGYPVPPAASGYQRVNRALDSRIPNNAVGS 557
Query: 425 FLGAGGSNISNIGQMSGARVKLNDPQSSGSECVVEIHGSSEQMKAAQNLLQSFIASAVQN 246
F G GGS++S+IG++ RVK D QS G E V EI G S+Q+ AAQN+LQ+ +AS QN
Sbjct: 558 FTGIGGSDVSHIGEVPRPRVKYQDSQSGGFEQVAEIRG-SDQLNAAQNILQALMASMGQN 616
Query: 245 FNAHQQQSPYSSAVQSFNAHQQHNPYTSAAHNFTQQQQSPYTAASAQN-FTXXXXQDPYA 69
+A Q S + +A ++ + + S H +SPY + Q+ + + P+
Sbjct: 617 ASA--QPSSHHNANTRQGSYPNISDHQSPYH--INAPRSPYRVNAPQSPYRVNAQRSPFQ 672
Query: 68 SAGQN--FNTQQQHDPY 24
Q + T Q PY
Sbjct: 673 IKAQQIPYQTNAQQSPY 689
>ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 707
Score = 491 bits (1265), Expect(2) = e-157
Identities = 272/501 (54%), Positives = 333/501 (66%), Gaps = 3/501 (0%)
Frame = -1
Query: 2095 KSSSYRKQFRLPFENNVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXXXXXXXX 1916
K +S +++ F+ G+K K + ++++ + DT Y ILC
Sbjct: 5 KRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVIGKGG 64
Query: 1915 XXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXXXXXDLQ 1736
KALREET AKI V +SVPG+D+R+VII S ST+ N +
Sbjct: 65 SIIKALREETQAKITVADSVPGSDDRIVIISSPSTKLARRQNNDK--------------N 110
Query: 1735 NDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTARLLVPSN 1556
ND P +E+ M+PHC AQDALLKVH+RI E+D L G +ED E I+T RLLVP+N
Sbjct: 111 NDNPETKEENYSMEPHCAAQDALLKVHNRIVEEDLL--GVQNEDKSEAVIIT-RLLVPNN 167
Query: 1555 QVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKKALYEVS 1376
VGCLLG+ G VIQKLRSETGA+IRVL AEHLPACAM+TDELVQISG ++ KKALYEVS
Sbjct: 168 LVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVS 227
Query: 1375 TLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTPPMPWFG 1205
TLLHQNPR P ++P G QGFHPPGPPM +M+P PMWS + G PP G
Sbjct: 228 TLLHQNPRKDKPISSFPMVHGAQGFHPPGPPMENMIPPGKPMWSQSKTNLNGMPPALGVG 287
Query: 1204 GYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQIQQETGA 1025
GY ++ + G+A +FTMKILC A KIG VIGKGG NV+Q+QQETGA
Sbjct: 288 GYRNQLTGFGRADFDYGPPPSAGEAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQETGA 347
Query: 1024 NIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTRLLVSSS 845
IHV+D PE+DERVI VS+ E+ W+PRS TI+AILQLQ+ T+E SDKG +TTRLL S+
Sbjct: 348 GIHVEDVAPESDERVIRVSSLESFWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSN 407
Query: 844 KVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARGALSEIA 665
KVGCI+GQGG +I EMRRRTQADIRV+SKD KP CAS DEELVQISG+ VA+ AL EI+
Sbjct: 408 KVGCIIGQGGQVINEMRRRTQADIRVLSKDEKPRCASADEELVQISGSIGVAKDALVEIS 467
Query: 664 SRLRVRSLEGVNAAPEXTSLR 602
SRLR R L N+ E T +R
Sbjct: 468 SRLRERCLRDANSKVESTHVR 488
Score = 94.0 bits (232), Expect(2) = e-157
Identities = 71/213 (33%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Frame = -3
Query: 611 FSERGMPPSGMIGAGSSGGYEHVKGGGHKYEAPTYPMQATATRFPNINGSMEVKIPNSAV 432
F R SG++GAGSS YEH+KG + + P+YP ATRF N E+K P+ +
Sbjct: 499 FRSRDPQRSGVMGAGSSRRYEHLKGAVRECDHPSYPDLPIATRFSNTRSPPEMKFPDHSY 558
Query: 431 GSFLGAGGSNISNIGQMSGARVKLNDPQSSGSECVVEIHGSSEQMKAAQNLLQSFIASAV 252
G+ G GG NI + +G+ + DP+S G V +I G+S++M A N+ +
Sbjct: 559 GTAKGTGGYNID---EFAGSSARYQDPRSIGPGFVDDIRGTSDRMNAGHNVFH----GSS 611
Query: 251 QNFNAHQQ--QSPYSSAVQSFNAHQQHNPYTSAAHNFTQQQQSPYTAASAQ--------N 102
+N NA + Q S A QS N HQ A H QQS Y + A+ +
Sbjct: 612 ENLNAGRPTFQGYGSPAGQSSNIHQ------GAYHQNYAAQQSAYQSYPAKGGYPSGSPS 665
Query: 101 FTXXXXQDPYASAGQNFNTQQ-QHDPYASAVQN 6
+P+ + QN N+QQ QH QN
Sbjct: 666 QLPYQNPNPHQAPYQNINSQQHQHQQAPPPYQN 698
>ref|XP_007033280.1| RNA-binding KH domain-containing protein isoform 5 [Theobroma cacao]
gi|508712309|gb|EOY04206.1| RNA-binding KH
domain-containing protein isoform 5 [Theobroma cacao]
Length = 591
Score = 520 bits (1338), Expect(2) = e-157
Identities = 291/502 (57%), Positives = 341/502 (67%), Gaps = 8/502 (1%)
Frame = -1
Query: 2098 RKSSSYRKQFRLPFENNVGNKKTKRH---NFNYDQGVVTPNNDDTVYRILCPXXXXXXXX 1928
RK + +K PF+ N K N ++Q N+ DTVYR+LCP
Sbjct: 4 RKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIGGVI 63
Query: 1927 XXXXXXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXXXX 1748
KALREET AKI VG+SV G DERV+II+SS + T N+
Sbjct: 64 GKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNS-------------- 109
Query: 1747 XDLQNDVPTEN--DEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTAR 1574
D EN DE M+P C AQDALLKVHD+IAEDD L+GG +D++ + +VTAR
Sbjct: 110 ---DEDSRGENKKDEVVVMEPCCAAQDALLKVHDQIAEDD-LFGGMALDDDNGNTVVTAR 165
Query: 1573 LLVPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKK 1394
LLVP+N VGCLLGK G VIQ+LRSETGA+IR+LPA+HLPACAM+TDELVQISG + K+
Sbjct: 166 LLVPNNMVGCLLGKRGDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKR 225
Query: 1393 ALYEVSTLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTP 1223
ALYEVSTLLHQNPR PP+++P GQ F PP +P NPMWSHRNS P
Sbjct: 226 ALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPPSA-----IPPSNPMWSHRNSSPHDIP 280
Query: 1222 PMPWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQI 1043
MPW +G+ S +ASAEF+MKILCPA KIG VIGKGG NV+Q+
Sbjct: 281 SMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQL 340
Query: 1042 QQETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTR 863
QQETGA IHV+D T E+DERVI VSA E WNPRS TI+AILQLQN T+E S+KG++TTR
Sbjct: 341 QQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTR 400
Query: 862 LLVSSSKVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARG 683
LLV SSKVGCILGQGGH+I EMRRRTQADIRV SKD KP+CASEDEELVQISGNF VA+
Sbjct: 401 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKD 460
Query: 682 ALSEIASRLRVRSLEGVNAAPE 617
AL+EIASRLRVR+L VNA E
Sbjct: 461 ALAEIASRLRVRTLRDVNAGAE 482
Score = 64.7 bits (156), Expect(2) = e-157
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 599 GMPPSGMIGAGSSGGYEHVKGGGHKYEAP--TYPMQATATRFPNINGSMEVKIPNSAVGS 426
G+PP+ IG G SGGYE +GGG + P Y + A R+ N+NG++E KI N+ S
Sbjct: 501 GLPPAAAIGPGRSGGYESFRGGGGREYEPQNNYSVPPAAVRYSNMNGALEAKILNNMSSS 560
Query: 425 FLGAGGSNISN 393
G GGS I N
Sbjct: 561 VTGTGGSTILN 571
>ref|XP_007033277.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma cacao]
gi|508712306|gb|EOY04203.1| RNA-binding KH
domain-containing protein isoform 2 [Theobroma cacao]
Length = 580
Score = 520 bits (1338), Expect(2) = e-157
Identities = 291/502 (57%), Positives = 341/502 (67%), Gaps = 8/502 (1%)
Frame = -1
Query: 2098 RKSSSYRKQFRLPFENNVGNKKTKRH---NFNYDQGVVTPNNDDTVYRILCPXXXXXXXX 1928
RK + +K PF+ N K N ++Q N+ DTVYR+LCP
Sbjct: 4 RKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIGGVI 63
Query: 1927 XXXXXXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXXXX 1748
KALREET AKI VG+SV G DERV+II+SS + T N+
Sbjct: 64 GKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNS-------------- 109
Query: 1747 XDLQNDVPTEN--DEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTAR 1574
D EN DE M+P C AQDALLKVHD+IAEDD L+GG +D++ + +VTAR
Sbjct: 110 ---DEDSRGENKKDEVVVMEPCCAAQDALLKVHDQIAEDD-LFGGMALDDDNGNTVVTAR 165
Query: 1573 LLVPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKK 1394
LLVP+N VGCLLGK G VIQ+LRSETGA+IR+LPA+HLPACAM+TDELVQISG + K+
Sbjct: 166 LLVPNNMVGCLLGKRGDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKR 225
Query: 1393 ALYEVSTLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTP 1223
ALYEVSTLLHQNPR PP+++P GQ F PP +P NPMWSHRNS P
Sbjct: 226 ALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPPSA-----IPPSNPMWSHRNSSPHDIP 280
Query: 1222 PMPWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQI 1043
MPW +G+ S +ASAEF+MKILCPA KIG VIGKGG NV+Q+
Sbjct: 281 SMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQL 340
Query: 1042 QQETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTR 863
QQETGA IHV+D T E+DERVI VSA E WNPRS TI+AILQLQN T+E S+KG++TTR
Sbjct: 341 QQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTR 400
Query: 862 LLVSSSKVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARG 683
LLV SSKVGCILGQGGH+I EMRRRTQADIRV SKD KP+CASEDEELVQISGNF VA+
Sbjct: 401 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKD 460
Query: 682 ALSEIASRLRVRSLEGVNAAPE 617
AL+EIASRLRVR+L VNA E
Sbjct: 461 ALAEIASRLRVRTLRDVNAGAE 482
Score = 64.7 bits (156), Expect(2) = e-157
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 599 GMPPSGMIGAGSSGGYEHVKGGGHKYEAP--TYPMQATATRFPNINGSMEVKIPNSAVGS 426
G+PP+ IG G SGGYE +GGG + P Y + A R+ N+NG++E KI N+ S
Sbjct: 501 GLPPAAAIGPGRSGGYESFRGGGGREYEPQNNYSVPPAAVRYSNMNGALEAKILNNMSSS 560
Query: 425 FLGAGGSNISN 393
G GGS I N
Sbjct: 561 VTGTGGSTILN 571
>ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Solanum tuberosum] gi|565383832|ref|XP_006358054.1|
PREDICTED: KH domain-containing protein At4g18375-like
isoform X2 [Solanum tuberosum]
Length = 705
Score = 485 bits (1249), Expect(2) = e-156
Identities = 268/501 (53%), Positives = 331/501 (66%), Gaps = 3/501 (0%)
Frame = -1
Query: 2095 KSSSYRKQFRLPFENNVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXXXXXXXX 1916
K +S +++ F+ G+K K + ++++ + DT Y ILC
Sbjct: 5 KRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVIGKGG 64
Query: 1915 XXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXXXXXDLQ 1736
KALREET AKI V +SVPG+D+R+VI+ S ST+ N +
Sbjct: 65 SIIKALREETQAKITVADSVPGSDDRIVIVSSPSTKLARRQNNDK--------------N 110
Query: 1735 NDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTARLLVPSN 1556
ND P +E+ M+PHC AQDALLKVH+RI E+D G +ED E I+T RLLVP+N
Sbjct: 111 NDNPETKEENCSMEPHCAAQDALLKVHNRIVEED--LQGVQNEDKSETVIIT-RLLVPNN 167
Query: 1555 QVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKKALYEVS 1376
VGCLLG+ G VIQKLRSETGA+IRVL AEHLPACAM+TDELVQISG ++ KKALYEVS
Sbjct: 168 LVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVS 227
Query: 1375 TLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTPPMPWFG 1205
TLLHQNPR P ++P G QGFHPPGPPM +M+P PMWS + G P G
Sbjct: 228 TLLHQNPRKDKPISSFPMVHGAQGFHPPGPPMENMIPPGKPMWSQSKTNLNGMSPALGVG 287
Query: 1204 GYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQIQQETGA 1025
GY ++ + G+A +FTMKILC A KIG VIGKGG NV+Q+QQ+TGA
Sbjct: 288 GYRNQLTGFGRADFDYGPPPSAGEAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQDTGA 347
Query: 1024 NIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTRLLVSSS 845
IHV+D PE+DERVI VS+ E+ W+PRS TI+AILQLQ+ T+E SDKG +TTRLL S+
Sbjct: 348 GIHVEDVAPESDERVIRVSSLESFWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSN 407
Query: 844 KVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARGALSEIA 665
KVGCI+GQGG +I EMRRRTQADIRV+SKD KP CAS DEELVQISG+ VA+ AL EI+
Sbjct: 408 KVGCIIGQGGQVINEMRRRTQADIRVLSKDDKPRCASADEELVQISGSIGVAKDALVEIS 467
Query: 664 SRLRVRSLEGVNAAPEXTSLR 602
SRLR R L N+ E T +R
Sbjct: 468 SRLRERCLRDANSKVESTPVR 488
Score = 94.7 bits (234), Expect(2) = e-156
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Frame = -3
Query: 587 SGMIGAGSSGGYEHVKGGGHKYEAPTYPMQATATRFPNINGSMEVKIPNSAVGSFLGAGG 408
SG +GAGSS YEH+KG +Y+ P+YP ATRF NI E+K P+ + GS G GG
Sbjct: 507 SGAMGAGSSRRYEHLKGAVREYDHPSYPDLPIATRFSNIRSPPEMKFPDHSYGSAKGTGG 566
Query: 407 SNISNIGQMSGARVKLNDPQSSGSECVVEIHGSSEQMKAAQNLLQSFIASAVQNFNA--- 237
NI + +G + DP+S G + +I G+S+ M A N+ + +NFNA
Sbjct: 567 YNID---EFAGRSARFQDPRSVGPGFIDDIRGTSDHMNAGHNVFH----GSSENFNAGRP 619
Query: 236 ----HQQQSPYSSAVQSFNAHQQHNPYTSAAHNFTQQQQSPYTAASAQNFTXXXXQDPYA 69
+ + SS +Q HQ + SA ++ + P + S + +P+
Sbjct: 620 TFQGYGSPAGQSSNIQQGAYHQNYAAQQSAYQSYPAKGGYPSGSPSQLPY---QNPNPHQ 676
Query: 68 SAGQNFNTQQ 39
+ QN N+QQ
Sbjct: 677 APYQNINSQQ 686
>ref|XP_007217649.1| hypothetical protein PRUPE_ppa027198mg, partial [Prunus persica]
gi|462413799|gb|EMJ18848.1| hypothetical protein
PRUPE_ppa027198mg, partial [Prunus persica]
Length = 576
Score = 509 bits (1310), Expect(2) = e-153
Identities = 288/505 (57%), Positives = 344/505 (68%), Gaps = 6/505 (1%)
Frame = -1
Query: 2113 MGKNKRKSSSYRKQFRLPFENNVGNKKTKRHNFNY---DQGVVTPNNDDTVYRILCPXXX 1943
M NKR + ++K+ + F+ GN K+ N+N +Q + + DTVYRILCP
Sbjct: 1 MDGNKR--NFFKKRPNVQFKRKGGNNNYKKGNWNNSTREQLLENYQSLDTVYRILCPSKR 58
Query: 1942 XXXXXXXXXXXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXX 1763
KALREET AKI V +SV G+DERV+IIFSS T K + TN
Sbjct: 59 IGGVIGKGGGIVKALREETRAKITVADSVLGSDERVIIIFSSPT-KISSKQTNDGDS--- 114
Query: 1762 XXXXXXDLQNDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIV 1583
+E +E E M PHC AQDALLKVH+RI E+D L+GG +D++E+ +V
Sbjct: 115 -------------SEENELEPMDPHCAAQDALLKVHNRIVEED-LFGGVTFDDDNENSVV 160
Query: 1582 TARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSI 1403
TARLLVP+N VGCLLGKGG VIQ+LRSET A+IRVLPA+ LP CAM TDELVQISG +
Sbjct: 161 TARLLVPNNMVGCLLGKGGDVIQRLRSETSASIRVLPADQLPTCAMETDELVQISGKPDV 220
Query: 1402 TKKALYEVSTLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFR 1232
TK+ALYEVSTLLHQNPR PP +P GQGF PPG PM +++P NPMWS+R
Sbjct: 221 TKRALYEVSTLLHQNPRKDKPPSGFPMPFWGQGFRPPGAPMTNVLPPGNPMWSNRAPS-H 279
Query: 1231 GTPPMPWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNV 1052
T PMP GYG+ S G+A AEF+MKILC KIG VIGKGG NV
Sbjct: 280 STAPMPRMEGYGNCSSEFALGGFNGVPPGHGGEALAEFSMKILCSPGKIGGVIGKGGFNV 339
Query: 1051 RQIQQETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSI 872
+Q+Q ETGA+IHV + + +++ERVI VSAFEA WNP S TIEAIL+LQN T+E+SDKG I
Sbjct: 340 KQLQLETGASIHVQEASTDSEERVIHVSAFEAFWNPISQTIEAILELQNKTSELSDKGII 399
Query: 871 TTRLLVSSSKVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNV 692
TTRLLV SSKVGCILGQGG +I EMRRRTQADIRV SKD +P CA+EDEELVQISGNF V
Sbjct: 400 TTRLLVPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDDRPRCAAEDEELVQISGNFGV 459
Query: 691 ARGALSEIASRLRVRSLEGVNAAPE 617
A+ AL+EI SRLRVR+L NA E
Sbjct: 460 AKDALAEITSRLRVRTLRDANAGAE 484
Score = 63.2 bits (152), Expect(2) = e-153
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = -3
Query: 593 PPSGMIGAGSSGGYEHVKGGGHKYEAPTYPMQATATRFPNINGSMEVKIPNSAVGSFLGA 414
PPS +GAGSS Y+ +K G H+YE +Y + +TA+ +P++N ++E KIP + V SF G
Sbjct: 508 PPSA-VGAGSSSRYDPLKVGRHEYELQSYRIPSTASGYPSVNHALEGKIPKNTVDSFPGT 566
Query: 413 GGSNISNI 390
G N S I
Sbjct: 567 RGGNTSTI 574
>ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
gi|557532839|gb|ESR44022.1| hypothetical protein
CICLE_v10011187mg [Citrus clementina]
Length = 528
Score = 529 bits (1362), Expect(2) = e-149
Identities = 287/502 (57%), Positives = 339/502 (67%), Gaps = 3/502 (0%)
Frame = -1
Query: 2113 MGKNKRKSSSYRKQFRLPFENNVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXX 1934
M +KR R + + VG KK N + +Q DTVYRILCP
Sbjct: 1 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60
Query: 1933 XXXXXXXXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXX 1754
K+LREET AKI V +++PG++ERV+II+SS T+ N
Sbjct: 61 VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN------------ 108
Query: 1753 XXXDLQNDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTAR 1574
++D + E M+PHC AQDALLKVHDRI E+D L+GG +D++E+ VTAR
Sbjct: 109 -----KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED-LFGGMASDDDNENSTVTAR 162
Query: 1573 LLVPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKK 1394
LLVP+N VGCLLGK G VIQ+LRSETGANIRVLPA+ LP CAM+TDELVQISG ++ K+
Sbjct: 163 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKR 222
Query: 1393 ALYEVSTLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTP 1223
ALYEVSTLLHQNPR PP ++P + GGQ FH P PMADM P N W RNS G P
Sbjct: 223 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 282
Query: 1222 PMPWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQI 1043
PW GGYG + SR G+ SAEF+MKILC A KIG VIGKGG NV+Q+
Sbjct: 283 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 342
Query: 1042 QQETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTR 863
QQETGA+IHV+D ++DERVI SAFE WNPRS TI+AILQLQN T+E S+KG+ITTR
Sbjct: 343 QQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTR 402
Query: 862 LLVSSSKVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARG 683
LLV SSKVGCILGQGGH+I EMRRRTQADIRV SKD KP+CASEDEELVQISGNF VA+
Sbjct: 403 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKD 462
Query: 682 ALSEIASRLRVRSLEGVNAAPE 617
AL+EIASRLR R+L N E
Sbjct: 463 ALTEIASRLRARTLRDANVGAE 484
Score = 30.0 bits (66), Expect(2) = e-149
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 602 RGMPPSGMIGAGSSGGYE 549
RG PSG +GAG SGGYE
Sbjct: 503 RGPLPSGPVGAGISGGYE 520
>ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 537
Score = 514 bits (1323), Expect(2) = e-148
Identities = 288/501 (57%), Positives = 341/501 (68%), Gaps = 2/501 (0%)
Frame = -1
Query: 2113 MGKNKRKSSSYRKQFRLPFENNVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXX 1934
M NKR + ++K F+ +K K +N ++ P DTVYRILCP
Sbjct: 1 MDGNKR--NVFKKYQNNQFKRKGVTRKGKWNNSGREESSGNPLPVDTVYRILCPSRKIGG 58
Query: 1933 XXXXXXXXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXX 1754
K LREET AKI V + VPG+DERV+II+SS + +N +
Sbjct: 59 VIGKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKISRNHNDH---------- 108
Query: 1753 XXXDLQNDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTAR 1574
D+ EN E + M+P+C AQDALLKVHDRI E+D L+GG +D++E+ VTAR
Sbjct: 109 ------EDLTMEN-EQDIMEPYCAAQDALLKVHDRIVEED-LFGGMTSDDDNENGFVTAR 160
Query: 1573 LLVPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKK 1394
LLVP+N VGCLLGK G VIQ+LRSETGANIRVLPA+HLP CAMSTDELVQIS + KK
Sbjct: 161 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKK 220
Query: 1393 ALYEVSTLLHQNPRP--PMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTPP 1220
ALYEVSTLLHQNPR P + P GQ FHPPG PM ++ P +PMW H NS PP
Sbjct: 221 ALYEVSTLLHQNPRKDKPPSVPMPYSGQSFHPPGGPMKNLPPLGSPMWPHHNSS-HSIPP 279
Query: 1219 MPWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQIQ 1040
MP G YGS+ S + SAEF+MKILC A KIG VIGKGGSNV+ +Q
Sbjct: 280 MPIMGRYGSQSSGFGPGGFDDVPRGHVAEPSAEFSMKILCSAGKIGGVIGKGGSNVKVVQ 339
Query: 1039 QETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTRL 860
Q+TGA+IHV+D + E+DERVI VSA EA WNPRS TI+AILQLQN T++ S+KG+ITTRL
Sbjct: 340 QDTGASIHVEDASAESDERVIRVSASEALWNPRSQTIDAILQLQNKTSDFSEKGTITTRL 399
Query: 859 LVSSSKVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARGA 680
LV SSKVGCILGQGG +I EMRRRTQADIRV SKD KP+CASEDEELVQISG F VA+ A
Sbjct: 400 LVPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDEKPKCASEDEELVQISGKFGVAKDA 459
Query: 679 LSEIASRLRVRSLEGVNAAPE 617
L+EIASRLRVR+L VNA E
Sbjct: 460 LAEIASRLRVRTLRDVNAGAE 480
Score = 41.2 bits (95), Expect(2) = e-148
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = -3
Query: 599 GMPPSGMIGAGSSGGYEHVKGGGHKYEAPTYPMQATATRF 480
G SGM+GA SSGGYE ++ H+YE+ +YP+ A +
Sbjct: 498 GRGSSGMMGASSSGGYEPLRDTEHEYESHSYPVPPAAVGY 537
>ref|XP_006383459.1| hypothetical protein POPTR_0005s15690g [Populus trichocarpa]
gi|550339070|gb|ERP61256.1| hypothetical protein
POPTR_0005s15690g [Populus trichocarpa]
Length = 563
Score = 498 bits (1283), Expect(2) = e-140
Identities = 271/494 (54%), Positives = 334/494 (67%), Gaps = 6/494 (1%)
Frame = -1
Query: 2080 RKQFRLPFEN---NVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXXXXXXXXXX 1910
RK F+ P N G +++ ++ G + DTVYRILCP
Sbjct: 6 RKYFKKPGNNLFKRKGVSSSRKGKWSDSHGEECSGDGDTVYRILCPSRKIGGVIGKGGNI 65
Query: 1909 XKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXXXXXDLQND 1730
KALREET +KI V +SV G+DERV+II+SSS + P + +
Sbjct: 66 VKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKMDGD----------------EG 109
Query: 1729 VPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTARLLVPSNQV 1550
+P N + E +PHC AQDALLKVHDRI E+D L+GG +D++++++VTARLLVP+N V
Sbjct: 110 LPAGNGQQEAFEPHCAAQDALLKVHDRIVEED-LFGGMASDDDNDNNVVTARLLVPNNMV 168
Query: 1549 GCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKKALYEVSTL 1370
GC+LGK G VIQ+LRSETGANIRVLPA+HLP+CAM TDELVQISG ++ K+ALYE+S L
Sbjct: 169 GCVLGKRGDVIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRALYEISIL 228
Query: 1369 LHQNPRPPM--NYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTP-PMPWFGGY 1199
LHQNPR + P GG+ FHPP MA+M+P NPMW HRNS TP MPW G Y
Sbjct: 229 LHQNPRKDKLPSVPMPYGGRTFHPPSDSMANMLPPGNPMWPHRNS----TPHSMPWMGEY 284
Query: 1198 GSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQIQQETGANI 1019
G+ S + SAEF+MKILC KIG VIGKGGSNV+ +QQETGA+I
Sbjct: 285 GNHPSEFGPGGFNGVPPGHGREPSAEFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASI 344
Query: 1018 HVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTRLLVSSSKV 839
HV+D + E++ER I VSAFE WNPRS TI+AILQLQ+ T++ S+KG I TRLLV SSKV
Sbjct: 345 HVEDASAESEERAIRVSAFEGLWNPRSQTIDAILQLQDKTSDFSEKGMIITRLLVPSSKV 404
Query: 838 GCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARGALSEIASR 659
GCILGQGG +I EMRRR QADIRV K+ KP+CAS+DEELVQISGN+ VA+ AL+EIASR
Sbjct: 405 GCILGQGGQVINEMRRRLQADIRVYPKNDKPKCASDDEELVQISGNYGVAKDALAEIASR 464
Query: 658 LRVRSLEGVNAAPE 617
LR R+L NA E
Sbjct: 465 LRARTLRDANAGTE 478
Score = 30.8 bits (68), Expect(2) = e-140
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -3
Query: 602 RGMPPSGMIGAGSSGGYEHVK 540
RG PSGM+ A SSGGYE ++
Sbjct: 497 RGPQPSGMMAASSSGGYEPLR 517
Score = 84.3 bits (207), Expect = 2e-13
Identities = 54/155 (34%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Frame = -1
Query: 1693 PHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTARLLVPSNQVGCLLGKGGHVIQ 1514
P DA+L++ D+ + D E ++ RLLVPS++VGC+LG+GG VI
Sbjct: 369 PRSQTIDAILQLQDKTS------------DFSEKGMIITRLLVPSSKVGCILGQGGQVIN 416
Query: 1513 KLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKKALYEVSTLLHQNPRPPMNYP 1334
++R A+IRV P P CA +ELVQISG + K AL E+++ L N
Sbjct: 417 EMRRRLQADIRVYPKNDKPKCASDDEELVQISGNYGVAKDALAEIASRLRARTLRDANAG 476
Query: 1333 TSIGGQGFHP---PGPPMADMMPQENPMWSHRNSG 1238
T G G P P + PQ + M + +SG
Sbjct: 477 TEPGPAGPVPGFGPARNLPGRGPQPSGMMAASSSG 511
>gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 464 bits (1193), Expect = e-127
Identities = 261/524 (49%), Positives = 321/524 (61%), Gaps = 15/524 (2%)
Frame = -1
Query: 2113 MGKNKRKSSSYRKQFRLPFENNVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXX 1934
M +KR R + + VG KK N + +Q DTVYRILCP
Sbjct: 1 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60
Query: 1933 XXXXXXXXXKALREETHAKIKVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXX 1754
K+LREET AKI V +++PG++ERV+II+SS T+ N
Sbjct: 61 VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN------------ 108
Query: 1753 XXXDLQNDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTAR 1574
++D + E M+PHC AQDALLKVHDRI E+D L+GG +D++E+ +TAR
Sbjct: 109 -----KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED-LFGGMASDDDNENSTITAR 162
Query: 1573 LLVPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKK 1394
LLVP+N VGCLLGK G VIQ+LRSETGANIRVLPA+ LP CAM+TDE+VQISG ++ K+
Sbjct: 163 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 222
Query: 1393 ALYEVSTLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTP 1223
ALYEVSTLLHQNPR PP ++P + GGQ FH P PMADM P N W RNS G P
Sbjct: 223 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 282
Query: 1222 PMPWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQI 1043
PW GGYG + SR G+ SAEF+MKILC A KIG VIGKGG NV+Q+
Sbjct: 283 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 342
Query: 1042 QQETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTR 863
QQETGA+IHV+D ++DERVI SAFE WNPRS TI+AILQLQN T+E S+KG+ITTR
Sbjct: 343 QQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTR 402
Query: 862 LLVSSSKVGCILGQGGHIITEMRRRTQADIRVIS--------KDGKPEC----ASEDEEL 719
LLV SSKVGCILGQGGH+I EMRRRTQADIRV+ G EC E L
Sbjct: 403 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 462
Query: 718 VQISGNFNVARGALSEIASRLRVRSLEGVNAAPEXTSLREECPH 587
+ G + + ++V+ N P+ +S + H
Sbjct: 463 ISAHGTYQ----SFMTSGQSMKVQPSSYQNINPQQSSCQTMSSH 502
Score = 75.1 bits (183), Expect = 1e-10
Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Frame = -3
Query: 449 IPNSAVGSFLGAGGSNISNIGQMS-------GARVKLNDPQSSGSECVVEIHGSSEQMKA 291
+P+S VG LG GG I+ + + + GARVKL DP SEC+V+I GSSE + +
Sbjct: 405 VPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLIS 464
Query: 290 AQNLLQSFIASAVQ---NFNAHQQQSPYSSAVQSFNAHQQHNPYTSAAHNFTQQQQSPYT 120
A QSF+ S +++Q +P S+ Q+ ++HQ +++ QQSPY
Sbjct: 465 AHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQTMSSHQ-------SSYQNMNTQQSPYH 517
Query: 119 AASAQNFTXXXXQDPYASAGQNFNTQQQHDP 27
+AQ PY QN N QQ P
Sbjct: 518 RVNAQQ-------SPY----QNINPQQSSYP 537
>ref|XP_007033281.1| RNA-binding KH domain-containing protein isoform 6, partial
[Theobroma cacao] gi|508712310|gb|EOY04207.1| RNA-binding
KH domain-containing protein isoform 6, partial
[Theobroma cacao]
Length = 530
Score = 334 bits (857), Expect(2) = e-120
Identities = 176/273 (64%), Positives = 201/273 (73%), Gaps = 3/273 (1%)
Frame = -1
Query: 1426 QISGTSSITKKALYEVSTLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMW 1256
+ISG + K+ALYEVSTLLHQNPR PP+++P GQ F PP +P NPMW
Sbjct: 39 KISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPPSA-----IPPSNPMW 93
Query: 1255 SHRNSGFRGTPPMPWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIV 1076
SHRNS P MPW +G+ S +ASAEF+MKILCPA KIG V
Sbjct: 94 SHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGV 153
Query: 1075 IGKGGSNVRQIQQETGANIHVDDRTPEADERVIIVSAFEAPWNPRSPTIEAILQLQNSTN 896
IGKGG NV+Q+QQETGA IHV+D T E+DERVI VSA E WNPRS TI+AILQLQN T+
Sbjct: 154 IGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTS 213
Query: 895 EISDKGSITTRLLVSSSKVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELV 716
E S+KG++TTRLLV SSKVGCILGQGGH+I EMRRRTQADIRV SKD KP+CASEDEELV
Sbjct: 214 EFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELV 273
Query: 715 QISGNFNVARGALSEIASRLRVRSLEGVNAAPE 617
QISGNF VA+ AL+EIASRLRVR+L VNA E
Sbjct: 274 QISGNFGVAKDALAEIASRLRVRTLRDVNAGAE 306
Score = 125 bits (315), Expect(2) = e-120
Identities = 74/185 (40%), Positives = 103/185 (55%), Gaps = 20/185 (10%)
Frame = -3
Query: 599 GMPPSGMIGAGSSGGYEHVKGGGHKYEAP--TYPMQATATRFPNINGSMEVKIPNSAVGS 426
G+PP+ IG G SGGYE +GGG + P Y + A R+ N+NG++E KI N+ S
Sbjct: 325 GLPPAAAIGPGRSGGYESFRGGGGREYEPQNNYSVPPAAVRYSNMNGALEAKILNNMSSS 384
Query: 425 FLGAGGSNISNIGQMSGARVKLNDPQSSGSECVVEIHGSSEQMKAAQNLLQSFIASAVQN 246
G GGS I N ++SGARV+L DPQ+ GSE E GSSE + AAQ++ QSF+ S+ Q+
Sbjct: 385 VTGTGGSTILN-SEVSGARVRLEDPQTGGSE---EFRGSSEHLTAAQSIFQSFMPSSGQS 440
Query: 245 FNAHQ------------------QQSPYSSAVQSFNAHQQHNPYTSAAHNFTQQQQSPYT 120
NA Q Q+SPY + + +Q +P+ S+ + QQSPY+
Sbjct: 441 MNAQQSSYQNLSVQQSSYLNMNAQRSPYPNMNAQQSPYQNRHPHQSSPYQNLSVQQSPYS 500
Query: 119 AASAQ 105
S Q
Sbjct: 501 VTSQQ 505
Score = 88.2 bits (217), Expect = 1e-14
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 3/172 (1%)
Frame = -1
Query: 1693 PHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTARLLVPSNQVGCLLGKGGHVIQ 1514
P DA+L++ ++ +E E GT VT RLLVPS++VGC+LG+GGHVI
Sbjct: 197 PRSQTIDAILQLQNKTSEFSEK--GT----------VTTRLLVPSSKVGCILGQGGHVIN 244
Query: 1513 KLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKKALYEVSTLLHQNPRPPMN-- 1340
++R T A+IRV + P CA +ELVQISG + K AL E+++ L +N
Sbjct: 245 EMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVNAG 304
Query: 1339 -YPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTPPMPWFGGYGSEF 1187
+G P MAD +P + R+ G+ + GG G E+
Sbjct: 305 AETAPVGPVNGFGPARSMADGLPPAAAIGPGRSGGYES-----FRGGGGREY 351
>ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g18375-like [Oryza
brachyantha]
Length = 773
Score = 385 bits (990), Expect = e-104
Identities = 223/478 (46%), Positives = 300/478 (62%), Gaps = 7/478 (1%)
Frame = -1
Query: 2053 NNVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXXXXXXXXXXXKALREETHAKI 1874
+N ++K KR N +D G ++ +T+YRILCP KALR+ET AKI
Sbjct: 20 SNSDDRKRKRLNTKHDDGSMSSQPTETIYRILCPVKKIGSVLGRGGDVVKALRDETKAKI 79
Query: 1873 KVGESVPGTDERVVIIFSSSTRKPTINNTNXXXXXXXXXXXXXDLQNDVPTEN---DEHE 1703
+V +S+PG DERV+IIF+ ++ ++D +N D +
Sbjct: 80 RVADSIPGADERVIIIFNYPSQS----------------------EDDEAAQNISTDGFQ 117
Query: 1702 QMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTARLLVPSNQVGCLLGKGGH 1523
M+PHC AQDALLK+HD+IAED++L+GG HE ++ D VTAR+LVP NQVGCLLGKGG
Sbjct: 118 NMKPHCFAQDALLKIHDKIAEDEDLHGGIDHEKSETVDGVTARILVPGNQVGCLLGKGGS 177
Query: 1522 VIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKKALYEVSTLLHQNPR--- 1352
+IQ+LR+ETGA IRVLP+E+LP CA+ +DELVQISG S+ +KALYE+ST LHQ+PR
Sbjct: 178 IIQQLRNETGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKDN 237
Query: 1351 PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTPPMPWFGGYGSEFSRXXX 1172
PP+ Q H P +P NPM H + +P +P Y + R
Sbjct: 238 PPLEEIIDASTQRKHQSPP----QLPHANPMLPHLHVDH--SPQIPLLDPYRNGPLRYHA 291
Query: 1171 XXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQIQQETGANIHVDDRTPEA 992
+ EF++KILC ++ IG VIGK G NVRQ++Q+TGA I V + A
Sbjct: 292 G------------EAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGARIQVKEVGKNA 339
Query: 991 D-ERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTRLLVSSSKVGCILGQGG 815
ER+I+VS+ E P +P SPTIEA++ L + + ++ +TTRL+V S+KVGCILG+GG
Sbjct: 340 SGERLIVVSSQEIPDDPVSPTIEALILLHSKVSAPAENRHLTTRLVVPSNKVGCILGEGG 399
Query: 814 HIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARGALSEIASRLRVRSL 641
+ITEMRRRT A+IRV SK KP+ S DEELVQ++G +ARGAL+EIASRLR R+L
Sbjct: 400 KVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTL 457
Score = 85.9 bits (211), Expect = 7e-14
Identities = 48/125 (38%), Positives = 76/125 (60%)
Frame = -3
Query: 584 GMIGAGSSGGYEHVKGGGHKYEAPTYPMQATATRFPNINGSMEVKIPNSAVGSFLGAGGS 405
G+ AG+S Y++ + + Y T +P GS+E++IPNS + + +G GG+
Sbjct: 650 GITRAGNSNAYDYTEAAEQIHGREDYRRLTGFTGYPG--GSVELRIPNSYLETVIGVGGA 707
Query: 404 NISNIGQMSGARVKLNDPQSSGSECVVEIHGSSEQMKAAQNLLQSFIASAVQNFNAHQQQ 225
N++ I Q+SGARVKL + + SE +VEI G +Q+KAAQ+LLQ FI + + + +Q
Sbjct: 708 NLAEIRQISGARVKLLETHPASSESIVEIQGVPDQVKAAQSLLQGFIGA-----SGNSRQ 762
Query: 224 SPYSS 210
+P SS
Sbjct: 763 APQSS 767
>gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica Group]
Length = 677
Score = 380 bits (976), Expect = e-102
Identities = 226/503 (44%), Positives = 308/503 (61%), Gaps = 6/503 (1%)
Frame = -1
Query: 2101 KRKSSSYRKQFRLPFENNVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXXXXXX 1922
+ KS++ RK R F ++ G K KR N +D G ++ +T+YRILCP
Sbjct: 8 RHKSNTSRK--RPHFNSDDG--KRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGR 63
Query: 1921 XXXXXKALREETHAKIKVGESVPGTDERVVIIF--SSSTRKPTINNTNXXXXXXXXXXXX 1748
KALR+ T AKI+V +S+PG DERV+IIF SS T + N
Sbjct: 64 GGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQN--------------- 108
Query: 1747 XDLQNDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTARLL 1568
D E M+PHC AQDALLK+HD+IA D++L+ G HE ++ D V AR+L
Sbjct: 109 --------ISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARIL 160
Query: 1567 VPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKKAL 1388
VP NQVGCLLGKGG +IQ+LR++TGA IRVLP+E+LP CA+ +DELVQISG+SS+ +KAL
Sbjct: 161 VPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKAL 220
Query: 1387 YEVSTLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTPPM 1217
YE+ST LHQ+PR PP+ Q H P +P NPM H + +P +
Sbjct: 221 YEISTRLHQHPRKDNPPLEEIIDASTQRKHQAPP----QLPHANPMLPHLHVDH--SPQI 274
Query: 1216 PWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQIQQ 1037
P Y + + EF++KILC ++ IG VIGK G NVRQ++Q
Sbjct: 275 PLLDPYRNR------------PLQYHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQ 322
Query: 1036 ETGANIHVDDRTPEA-DERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTRL 860
+TGA + V + A +ER+I+VS+ E P +P SPTIEA++ L + + +++ +TTRL
Sbjct: 323 QTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRL 382
Query: 859 LVSSSKVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARGA 680
+V S+KVGCI+G+GG +ITEMRRRT A+IRV SK KP+ S DEELVQ++G +ARGA
Sbjct: 383 VVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGA 442
Query: 679 LSEIASRLRVRSLEGVNAAPEXT 611
L+EIASRLR R+L +++ T
Sbjct: 443 LTEIASRLRTRTLRDGSSSNNPT 465
>ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] gi|22128716|gb|AAM92828.1|
putative RNA-binding protein [Oryza sativa Japonica
Group] gi|110289325|gb|ABB47821.2| KH domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa
Japonica Group] gi|215694845|dbj|BAG90036.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 762
Score = 380 bits (976), Expect = e-102
Identities = 226/503 (44%), Positives = 308/503 (61%), Gaps = 6/503 (1%)
Frame = -1
Query: 2101 KRKSSSYRKQFRLPFENNVGNKKTKRHNFNYDQGVVTPNNDDTVYRILCPXXXXXXXXXX 1922
+ KS++ RK R F ++ G K KR N +D G ++ +T+YRILCP
Sbjct: 8 RHKSNTSRK--RPHFNSDDG--KRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGR 63
Query: 1921 XXXXXKALREETHAKIKVGESVPGTDERVVIIF--SSSTRKPTINNTNXXXXXXXXXXXX 1748
KALR+ T AKI+V +S+PG DERV+IIF SS T + N
Sbjct: 64 GGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQN--------------- 108
Query: 1747 XDLQNDVPTENDEHEQMQPHCPAQDALLKVHDRIAEDDELYGGTGHEDNDEDDIVTARLL 1568
D E M+PHC AQDALLK+HD+IA D++L+ G HE ++ D V AR+L
Sbjct: 109 --------ISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARIL 160
Query: 1567 VPSNQVGCLLGKGGHVIQKLRSETGANIRVLPAEHLPACAMSTDELVQISGTSSITKKAL 1388
VP NQVGCLLGKGG +IQ+LR++TGA IRVLP+E+LP CA+ +DELVQISG+SS+ +KAL
Sbjct: 161 VPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKAL 220
Query: 1387 YEVSTLLHQNPR---PPMNYPTSIGGQGFHPPGPPMADMMPQENPMWSHRNSGFRGTPPM 1217
YE+ST LHQ+PR PP+ Q H P +P NPM H + +P +
Sbjct: 221 YEISTRLHQHPRKDNPPLEEIIDASTQRKHQAPP----QLPHANPMLPHLHVDH--SPQI 274
Query: 1216 PWFGGYGSEFSRXXXXXXXXXXXXXXGKASAEFTMKILCPAQKIGIVIGKGGSNVRQIQQ 1037
P Y + + EF++KILC ++ IG VIGK G NVRQ++Q
Sbjct: 275 PLLDPYRNR------------PLQYHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQ 322
Query: 1036 ETGANIHVDDRTPEA-DERVIIVSAFEAPWNPRSPTIEAILQLQNSTNEISDKGSITTRL 860
+TGA + V + A +ER+I+VS+ E P +P SPTIEA++ L + + +++ +TTRL
Sbjct: 323 QTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRL 382
Query: 859 LVSSSKVGCILGQGGHIITEMRRRTQADIRVISKDGKPECASEDEELVQISGNFNVARGA 680
+V S+KVGCI+G+GG +ITEMRRRT A+IRV SK KP+ S DEELVQ++G +ARGA
Sbjct: 383 VVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGA 442
Query: 679 LSEIASRLRVRSLEGVNAAPEXT 611
L+EIASRLR R+L +++ T
Sbjct: 443 LTEIASRLRTRTLRDGSSSNNPT 465
Score = 89.4 bits (220), Expect = 7e-15
Identities = 50/130 (38%), Positives = 79/130 (60%)
Frame = -3
Query: 584 GMIGAGSSGGYEHVKGGGHKYEAPTYPMQATATRFPNINGSMEVKIPNSAVGSFLGAGGS 405
G+ AG+S Y++ + + Y + T +P GS+E +IPNS + S +GAGG
Sbjct: 639 GITRAGNSNAYDYTEAAEQIHGREDYRRLSGLTGYPG--GSVEFRIPNSYLESVIGAGGV 696
Query: 404 NISNIGQMSGARVKLNDPQSSGSECVVEIHGSSEQMKAAQNLLQSFIASAVQNFNAHQQQ 225
N++ I Q+SGARVKL++ SE +VEI G +Q+KAAQ+LLQ FI + +++ +Q
Sbjct: 697 NLAEIRQISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQSLLQGFIGA-----SSNSRQ 751
Query: 224 SPYSSAVQSF 195
+P SS + +
Sbjct: 752 APQSSRMAHY 761