BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00013535
         (996 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   337   4e-90
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              337   4e-90
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   325   1e-86
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   322   1e-85
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr...   319   1e-84
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr...   318   2e-84
ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1...   318   2e-84
dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         317   6e-84
ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, part...   310   4e-82
ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform ...   309   1e-81
ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform ...   308   2e-81
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]             307   4e-81
ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like iso...   304   4e-80
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso...   303   7e-80
ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso...   297   4e-78
ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cu...   295   2e-77
ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   291   3e-76
gb|EYU32990.1| hypothetical protein MIMGU_mgv1a012190mg [Mimulus...   290   6e-76
ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatul...   288   2e-75
gb|ADE76390.1| unknown [Picea sitchensis]                             280   7e-73

>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  337 bits (864), Expect = 4e-90
 Identities = 170/254 (66%), Positives = 196/254 (77%)
 Frame = +2

Query: 29  RHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQWD 208
           RH+CL+L+I  ++E      IFIKATWF SHF LSIT GL AW+CNASE EVRERA QWD
Sbjct: 6   RHSCLKLQIPNQSEP-----IFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60

Query: 209 QPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNKN 388
           QPVS+YI  AER+LGF+QPGS+Y F DAG+G++RLSWTFEK+GTKLEWRWKC  SP++++
Sbjct: 61  QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120

Query: 389 TTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIYAKFI 568
           TT  +LDFLM+ANIRLSEEVV K+QSFERLKVEAEKCLAQSEKF NEKAEFE AIYAKF+
Sbjct: 121 TTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFL 180

Query: 569 GVLNSKKAKLRELRDQQSKQEATGKLPQXXXXXXXXXXXXXXXXXXXXXXXXPTKNLIGT 748
           GVLNSKKAKLRELRDQ SK+E TGKLPQ                         +KNL GT
Sbjct: 181 GVLNSKKAKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESDNEAIEEESSKNLTGT 240

Query: 749 SKKVPETRPHSQKR 790
           SK V  +RP  +KR
Sbjct: 241 SKHVSTSRPRGRKR 254


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  337 bits (864), Expect = 4e-90
 Identities = 170/254 (66%), Positives = 196/254 (77%)
 Frame = +2

Query: 29  RHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQWD 208
           RH+CL+L+I  ++E      IFIKATWF SHF LSIT GL AW+CNASE EVRERA QWD
Sbjct: 6   RHSCLKLQIPNQSEP-----IFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60

Query: 209 QPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNKN 388
           QPVS+YI  AER+LGF+QPGS+Y F DAG+G++RLSWTFEK+GTKLEWRWKC  SP++++
Sbjct: 61  QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120

Query: 389 TTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIYAKFI 568
           TT  +LDFLM+ANIRLSEEVV K+QSFERLKVEAEKCLAQSEKF NEKAEFE AIYAKF+
Sbjct: 121 TTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFL 180

Query: 569 GVLNSKKAKLRELRDQQSKQEATGKLPQXXXXXXXXXXXXXXXXXXXXXXXXPTKNLIGT 748
           GVLNSKKAKLRELRDQ SK+E TGKLPQ                         +KNL GT
Sbjct: 181 GVLNSKKAKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESDNEAIEEESSKNLTGT 240

Query: 749 SKKVPETRPHSQKR 790
           SK V  +RP  +KR
Sbjct: 241 SKHVSTSRPRGRKR 254


>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
          Length = 256

 Score =  325 bits (834), Expect = 1e-86
 Identities = 160/255 (62%), Positives = 189/255 (74%)
 Frame = +2

Query: 26  TRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQW 205
           TRHTCL+LEI++  +      IF+K TWF++HFDLSIT GL+ W+CNASE +V++RA QW
Sbjct: 3   TRHTCLKLEISDATDP-----IFVKGTWFETHFDLSITDGLNVWLCNASEEQVKDRAAQW 57

Query: 206 DQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNK 385
           DQPV+EYI+ AERYLGF+QPGS+Y F DA +G KRLSWTFEK+GTKLEWRWKC P+PN+K
Sbjct: 58  DQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNSK 117

Query: 386 NTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIYAKF 565
             T  ILDFLMDANIRLS+EVV K+QSFERLKVEAEKCLAQSE+F NEK EFE AIYAKF
Sbjct: 118 KVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFNNEKLEFESAIYAKF 177

Query: 566 IGVLNSKKAKLRELRDQQSKQEATGKLPQXXXXXXXXXXXXXXXXXXXXXXXXPTKNLIG 745
           +GVLNSKK+KLRELRD+ SKQ   G L Q                        P K +  
Sbjct: 178 LGVLNSKKSKLRELRDKLSKQAVMGDLQQEEEQSTDKTESFDEGSDDDKSEEEPAKAITS 237

Query: 746 TSKKVPETRPHSQKR 790
           TSK VP +R   +KR
Sbjct: 238 TSKGVPASRARGRKR 252


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  322 bits (826), Expect = 1e-85
 Identities = 162/261 (62%), Positives = 191/261 (73%), Gaps = 2/261 (0%)
 Frame = +2

Query: 20  DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 199
           ++ RHTCL+LEITE         IF+K TWFDSHF LSIT GL+AW+CNA+E +V+ERA 
Sbjct: 11  ETARHTCLKLEITEP--------IFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAA 62

Query: 200 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 379
           QWDQPVSEYI  AE YLGF+QPGSIY F DAG+ +KRLSWTFEK+GTKLEWRWKC+PSP+
Sbjct: 63  QWDQPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPD 122

Query: 380 NKNTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIYA 559
           NK TT  ILDFLMDANIRLSEEVV+K+ SFERLK EA+KCL QSE+F  EK EFE +IYA
Sbjct: 123 NKMTTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSIYA 182

Query: 560 KFIGVLNSKKAKLRELRDQQSKQEATGKLPQ--XXXXXXXXXXXXXXXXXXXXXXXXPTK 733
           KF+ VLNSKK KLR+LRDQ SK+EA+GKLPQ                          P +
Sbjct: 183 KFLAVLNSKKRKLRQLRDQLSKKEASGKLPQEEEEESTDKTESFEEDSSDGDKSEEEPPE 242

Query: 734 NLIGTSKKVPETRPHSQKRGT 796
            + GTS+  P +R   +KR T
Sbjct: 243 KVTGTSEDKPSSRGRGRKRIT 263


>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
           gi|557522035|gb|ESR33402.1| hypothetical protein
           CICLE_v10005690mg [Citrus clementina]
          Length = 256

 Score =  319 bits (817), Expect = 1e-84
 Identities = 159/258 (61%), Positives = 190/258 (73%)
 Frame = +2

Query: 17  MDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERA 196
           M++T HTCL+LEI +  +      IF+K TWF +HFDLSIT GL+AW+CNASE +V++RA
Sbjct: 1   MEATSHTCLKLEIPDATDP-----IFVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRA 55

Query: 197 NQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSP 376
             WDQPV+EY++ AERYLGF+QPGS+Y F DA +G KRLSWTFEK+GTKLEWRWKC  +P
Sbjct: 56  ALWDQPVTEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAP 115

Query: 377 NNKNTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIY 556
           N+K  T  ILDFLMDANIRLS+EVV K+QSFERLKVEAEKCLAQSE+FKNEK EFE AIY
Sbjct: 116 NSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAIY 175

Query: 557 AKFIGVLNSKKAKLRELRDQQSKQEATGKLPQXXXXXXXXXXXXXXXXXXXXXXXXPTKN 736
           AKF+GVLNSKK+KLRELRD+ SKQ   G L Q                        P K+
Sbjct: 176 AKFLGVLNSKKSKLRELRDKLSKQAVMGDL-QQEEQSTDKTESFDEGSDDDKSEEEPAKD 234

Query: 737 LIGTSKKVPETRPHSQKR 790
           +  TSK VP +R   +KR
Sbjct: 235 ITSTSKGVPASRARGRKR 252


>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
           gi|557522040|gb|ESR33407.1| hypothetical protein
           CICLE_v10005689mg [Citrus clementina]
          Length = 256

 Score =  318 bits (815), Expect = 2e-84
 Identities = 158/255 (61%), Positives = 187/255 (73%)
 Frame = +2

Query: 26  TRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQW 205
           TRHTCL+LEI +  +      IF K TWF +HFDLSIT GL+AW+CNASE +V++RA QW
Sbjct: 3   TRHTCLKLEIPDATDP-----IFAKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQW 57

Query: 206 DQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNK 385
           DQPV+EYI+ AERYLGF+QPGS+Y F DA +G KRLSWTFEK+GTKLEWRWK  P+PN+K
Sbjct: 58  DQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKFGPAPNSK 117

Query: 386 NTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIYAKF 565
             T  ILDFLMDANIRLS+EVV K+QSFERLKVE +KCLAQSE+FKNEK EFE AIY+KF
Sbjct: 118 KVTAGILDFLMDANIRLSDEVVTKTQSFERLKVETQKCLAQSERFKNEKVEFESAIYSKF 177

Query: 566 IGVLNSKKAKLRELRDQQSKQEATGKLPQXXXXXXXXXXXXXXXXXXXXXXXXPTKNLIG 745
           +GVLNSKK+KLRELRD+ SKQ   G L Q                        PTK++  
Sbjct: 178 LGVLNSKKSKLRELRDKLSKQAVMGDLQQEEEESTDKTESFDGGSDDDKSEEQPTKDITS 237

Query: 746 TSKKVPETRPHSQKR 790
           TS  VP +R   +KR
Sbjct: 238 TSIGVPASRARGRKR 252


>ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
           gi|508714033|gb|EOY05930.1| DNA repair protein XRCC4,
           putative isoform 1 [Theobroma cacao]
          Length = 263

 Score =  318 bits (815), Expect = 2e-84
 Identities = 163/266 (61%), Positives = 189/266 (71%), Gaps = 2/266 (0%)
 Frame = +2

Query: 5   EVAAMDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEV 184
           E ++  +TRHTCL+LEI       + E IF+K TWFD+HFD+SIT GL AW+CNA+E EV
Sbjct: 2   ETSSSSTTRHTCLKLEIP------STEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEV 55

Query: 185 RERANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKC 364
           +ERA QWDQPV+EYIE AERYLGF+Q GS+Y F DAG+ +KRLSW FEK+GTKLEWRWK 
Sbjct: 56  KERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKF 115

Query: 365 KPSPNNKNTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFE 544
           +PSP+++  T  ILDFLMDANIRLSEEV RK+QSFE+LKVEAEKCL QSE+  NEK EFE
Sbjct: 116 RPSPDSQKITGGILDFLMDANIRLSEEVFRKTQSFEKLKVEAEKCLEQSERSTNEKMEFE 175

Query: 545 LAIYAKFIGVLNSKKAKLRELRDQQSKQEATGKLPQXXXXXXXXXXXXXXXXXXXXXXXX 724
             IYAKF+GVLNSKKAKLRELRDQ SKQE TGK                           
Sbjct: 176 SEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDKTESYHTGSDAEGGEEE 235

Query: 725 PTKNLIGTSKKVPET--RPHSQKRGT 796
           P KNL  T K VP    R   +KR T
Sbjct: 236 PEKNLTSTCKDVPAAAGRGRGRKRAT 261


>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  317 bits (811), Expect = 6e-84
 Identities = 165/263 (62%), Positives = 191/263 (72%), Gaps = 2/263 (0%)
 Frame = +2

Query: 17  MDST--RHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRE 190
           M+ST  RHTCL+LEI        PE IFIK TWF  HF+LSIT GL++W CNA+E EVR 
Sbjct: 1   MESTMARHTCLKLEI--------PEPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRG 52

Query: 191 RANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKP 370
           RA QWDQPVS YI+ AE++LGF+ PGS+Y F DAG G KRLSWTFEK+GTKLEWRWKC+P
Sbjct: 53  RAAQWDQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQP 112

Query: 371 SPNNKNTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELA 550
           SP+ K TTT ILDFLMDANIRLSEEVVRK+QSFERLK EAEKCLAQSEKF ++K EFE A
Sbjct: 113 SPDTKKTTTLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAA 172

Query: 551 IYAKFIGVLNSKKAKLRELRDQQSKQEATGKLPQXXXXXXXXXXXXXXXXXXXXXXXXPT 730
           +YAKF+GVLNSKK KLRELRDQ SK+E +G+  Q                        P 
Sbjct: 173 VYAKFLGVLNSKKRKLRELRDQLSKKEISGESAQ-EGEDSDKTESFDRGSDDEKSVEKPR 231

Query: 731 KNLIGTSKKVPETRPHSQKRGTH 799
           + L GTSK  P  R + +K+ TH
Sbjct: 232 EKLAGTSKDPPPRRGYVRKKITH 254


>ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina]
           gi|557522045|gb|ESR33412.1| hypothetical protein
           CICLE_v10007171mg, partial [Citrus clementina]
          Length = 243

 Score =  310 bits (795), Expect = 4e-82
 Identities = 149/239 (62%), Positives = 180/239 (75%)
 Frame = +2

Query: 74  ENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQWDQPVSEYIETAERYLG 253
           +N +  ++K TWF +HFDLSIT GL+AW+CNASE +V++RA QWDQPV+EY++ AERYLG
Sbjct: 1   KNGDETYVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWDQPVTEYVKLAERYLG 60

Query: 254 FRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNKNTTTEILDFLMDANIR 433
           F+QPGS+Y+F DA +G KRLSWTFEK+GTKLEWRWKC  +PN+K  T  ILDFLMDANIR
Sbjct: 61  FQQPGSVYAFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAPNSKKVTAGILDFLMDANIR 120

Query: 434 LSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIYAKFIGVLNSKKAKLRELRD 613
           LS+EVV K+QSFERLKVEAEKCLAQSE+FKNEK EFE A+YAKF+GVLNSKK+KLRELRD
Sbjct: 121 LSDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAVYAKFLGVLNSKKSKLRELRD 180

Query: 614 QQSKQEATGKLPQXXXXXXXXXXXXXXXXXXXXXXXXPTKNLIGTSKKVPETRPHSQKR 790
           + SKQ   G L Q                        P K++  TSK VP +R   +KR
Sbjct: 181 KLSKQAVMGDLQQEEEQSTDKTESFDEGSDDDKSEEEPAKDITSTSKGVPASRARGRKR 239


>ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao]
           gi|508714034|gb|EOY05931.1| DNA ligase iv-binding
           protein XRCC4 isoform 2 [Theobroma cacao]
          Length = 276

 Score =  309 bits (791), Expect = 1e-81
 Identities = 163/279 (58%), Positives = 189/279 (67%), Gaps = 15/279 (5%)
 Frame = +2

Query: 5   EVAAMDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEV 184
           E ++  +TRHTCL+LEI       + E IF+K TWFD+HFD+SIT GL AW+CNA+E EV
Sbjct: 2   ETSSSSTTRHTCLKLEIP------STEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEV 55

Query: 185 RERANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKC 364
           +ERA QWDQPV+EYIE AERYLGF+Q GS+Y F DAG+ +KRLSW FEK+GTKLEWRWK 
Sbjct: 56  KERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKF 115

Query: 365 KPSPNNKNTTTEILDFLMDANIRLS-------------EEVVRKSQSFERLKVEAEKCLA 505
           +PSP+++  T  ILDFLMDANIRLS             EEV RK+QSFE+LKVEAEKCL 
Sbjct: 116 RPSPDSQKITGGILDFLMDANIRLSHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKCLE 175

Query: 506 QSEKFKNEKAEFELAIYAKFIGVLNSKKAKLRELRDQQSKQEATGKLPQXXXXXXXXXXX 685
           QSE+  NEK EFE  IYAKF+GVLNSKKAKLRELRDQ SKQE TGK              
Sbjct: 176 QSERSTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDKTES 235

Query: 686 XXXXXXXXXXXXXPTKNLIGTSKKVPET--RPHSQKRGT 796
                        P KNL  T K VP    R   +KR T
Sbjct: 236 YHTGSDAEGGEEEPEKNLTSTCKDVPAAAGRGRGRKRAT 274


>ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao]
           gi|508714035|gb|EOY05932.1| DNA ligase iv-binding
           protein XRCC4 isoform 3 [Theobroma cacao]
          Length = 277

 Score =  308 bits (790), Expect = 2e-81
 Identities = 163/280 (58%), Positives = 189/280 (67%), Gaps = 16/280 (5%)
 Frame = +2

Query: 5   EVAAMDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEV 184
           E ++  +TRHTCL+LEI       + E IF+K TWFD+HFD+SIT GL AW+CNA+E EV
Sbjct: 2   ETSSSSTTRHTCLKLEIP------STEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEV 55

Query: 185 RERANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKC 364
           +ERA QWDQPV+EYIE AERYLGF+Q GS+Y F DAG+ +KRLSW FEK+GTKLEWRWK 
Sbjct: 56  KERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKF 115

Query: 365 KPSPNNKNTTTEILDFLMDANIRLS--------------EEVVRKSQSFERLKVEAEKCL 502
           +PSP+++  T  ILDFLMDANIRLS              EEV RK+QSFE+LKVEAEKCL
Sbjct: 116 RPSPDSQKITGGILDFLMDANIRLSKHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKCL 175

Query: 503 AQSEKFKNEKAEFELAIYAKFIGVLNSKKAKLRELRDQQSKQEATGKLPQXXXXXXXXXX 682
            QSE+  NEK EFE  IYAKF+GVLNSKKAKLRELRDQ SKQE TGK             
Sbjct: 176 EQSERSTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDKTE 235

Query: 683 XXXXXXXXXXXXXXPTKNLIGTSKKVPET--RPHSQKRGT 796
                         P KNL  T K VP    R   +KR T
Sbjct: 236 SYHTGSDAEGGEEEPEKNLTSTCKDVPAAAGRGRGRKRAT 275


>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
          Length = 257

 Score =  307 bits (787), Expect = 4e-81
 Identities = 157/258 (60%), Positives = 187/258 (72%), Gaps = 1/258 (0%)
 Frame = +2

Query: 20  DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 199
           +S RHTCL+LE       ++ + IF+ ATWF SHF+LS+T G  AWIC+ASE EVR+RA 
Sbjct: 3   ESKRHTCLKLE------PKDSDPIFVNATWFPSHFNLSVTDGHHAWICHASEEEVRDRAA 56

Query: 200 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 379
           QWDQPV EY+  AERYLGF+QP S+Y+F DAG+G+KRLSWTFEK+GTKL+WRWKC+P+P+
Sbjct: 57  QWDQPVPEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEGTKLQWRWKCQPAPD 116

Query: 380 NKNTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIYA 559
           +K TT E LDFLMDANIRLSEEVV KSQSFERLKVEAEKCL QSEK  NEK EFE  +YA
Sbjct: 117 SKKTTAETLDFLMDANIRLSEEVVIKSQSFERLKVEAEKCLEQSEKISNEKMEFESTLYA 176

Query: 560 KFIGVLNSKKAKLRELRDQQSKQE-ATGKLPQXXXXXXXXXXXXXXXXXXXXXXXXPTKN 736
           KF+GVLNSKKAKLRELR Q  K + A GKLPQ                         ++N
Sbjct: 177 KFLGVLNSKKAKLRELRAQLEKNDPAAGKLPQ-EEGSTDKTESFDDGSDDGKGEEESSEN 235

Query: 737 LIGTSKKVPETRPHSQKR 790
           + GTSK    +R   +KR
Sbjct: 236 VTGTSKGAQTSRSRGRKR 253


>ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Fragaria vesca
           subsp. vesca]
          Length = 259

 Score =  304 bits (778), Expect = 4e-80
 Identities = 144/208 (69%), Positives = 170/208 (81%)
 Frame = +2

Query: 29  RHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQWD 208
           R +CL+LE  E       + IF+K TWF S FDLSIT GL+AW+C+ASE  VR+RA QWD
Sbjct: 10  RQSCLKLEPKES------QPIFVKGTWFHSRFDLSITDGLNAWVCHASEDAVRDRAAQWD 63

Query: 209 QPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNKN 388
           QPV +Y+  AERYLGF+ P S+Y F DAG+G+KRLSWTF+K+GTKLEWRWKC+PSPN+K 
Sbjct: 64  QPVPDYVSLAERYLGFQHPDSVYKFTDAGDGHKRLSWTFDKEGTKLEWRWKCEPSPNSKE 123

Query: 389 TTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIYAKFI 568
           TT  +LDFLMDAN+ LSEEVVRK+QSFERLKVEAE CL QSE+  NEK EFE A+YAKF+
Sbjct: 124 TTAAVLDFLMDANVGLSEEVVRKTQSFERLKVEAEMCLIQSERIANEKIEFESAVYAKFL 183

Query: 569 GVLNSKKAKLRELRDQQSKQEATGKLPQ 652
           GVLNSKK KLRELRD+ SKQEA GKLP+
Sbjct: 184 GVLNSKKTKLRELRDKLSKQEAAGKLPE 211


>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
           tuberosum]
          Length = 267

 Score =  303 bits (776), Expect = 7e-80
 Identities = 146/202 (72%), Positives = 167/202 (82%)
 Frame = +2

Query: 23  STRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQ 202
           S +HTCL+L I+      N E IF+K TWF SHFDL IT GL +W C+ASE EV ERA+Q
Sbjct: 5   SPKHTCLKLVIS------NKEQIFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEERASQ 58

Query: 203 WDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNN 382
           WDQPVSEYI+ AE+YLGF+QPGS Y F DAG G+KRLSWTFEK+GTKLEWRWKC+PS N+
Sbjct: 59  WDQPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQPSSNS 118

Query: 383 KNTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIYAK 562
           K TT +ILDFLMDANIRLS+EVV K++SFER+KVEAEKCL QSEK   EK EFE AIYAK
Sbjct: 119 KKTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSREKEEFESAIYAK 178

Query: 563 FIGVLNSKKAKLRELRDQQSKQ 628
           F+GVLNSKK KLRELRD+ SKQ
Sbjct: 179 FLGVLNSKKKKLRELRDKLSKQ 200


>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
           lycopersicum]
          Length = 254

 Score =  297 bits (761), Expect = 4e-78
 Identities = 152/256 (59%), Positives = 181/256 (70%)
 Frame = +2

Query: 23  STRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQ 202
           S +HTCL+L I+      N E IF+K TWF S+FDL IT GL +W C+ASE EV ERA+Q
Sbjct: 5   SPKHTCLKLVIS------NKEQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERASQ 58

Query: 203 WDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNN 382
           WDQPVSEYI+  E+YLGF+QPGS+Y F DAG G+KRLSWTFEK+GTKLEWRWKC+ S N+
Sbjct: 59  WDQPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQSSSNS 118

Query: 383 KNTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIYAK 562
           K TT +ILDFLMDANIRLS+EVV K++SFER+KVEAEKCL QSEK   EK EFE AIYAK
Sbjct: 119 KKTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSKEKEEFESAIYAK 178

Query: 563 FIGVLNSKKAKLRELRDQQSKQEATGKLPQXXXXXXXXXXXXXXXXXXXXXXXXPTKNLI 742
           F+GVLN+KK KLRELRD+ SKQ  + + P                           K+ +
Sbjct: 179 FLGVLNAKKKKLRELRDKLSKQATSVEEP---VEEDAQSTDRTETFDEEISGEEVEKDDV 235

Query: 743 GTSKKVPETRPHSQKR 790
           GTSK VP  R   + R
Sbjct: 236 GTSKDVPARRGRGRGR 251


>ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus]
           gi|449478860|ref|XP_004155437.1| PREDICTED: DNA repair
           protein XRCC4-like [Cucumis sativus]
          Length = 233

 Score =  295 bits (755), Expect = 2e-77
 Identities = 145/213 (68%), Positives = 167/213 (78%), Gaps = 1/213 (0%)
 Frame = +2

Query: 17  MDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERA 196
           MD+ RHTCL+LE+   A+      IF+K TW    FDLSIT G  AW C+A+E EVR RA
Sbjct: 1   MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRA 60

Query: 197 NQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSP 376
            QWDQ  S+Y+  AERYLGF+QPGSIY F DAGNGYKRLSWTF+K+G KLEWRWKC+P+ 
Sbjct: 61  AQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFDKEGMKLEWRWKCQPAS 120

Query: 377 NNKNTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIY 556
           +NK TT  IL+FLMDANIRLSEEVVRK+QS ERLK E+EKCLAQSEK  +EK EFE AIY
Sbjct: 121 DNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIY 180

Query: 557 AKFIGVLNSKKAKLRELRDQQSKQEATG-KLPQ 652
           AKF+ VLN+KKAKLRE RDQ S+Q  TG KL Q
Sbjct: 181 AKFLNVLNAKKAKLREYRDQLSRQTITGSKLKQ 213


>ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Cicer arietinum]
          Length = 255

 Score =  291 bits (745), Expect = 3e-76
 Identities = 150/261 (57%), Positives = 179/261 (68%)
 Frame = +2

Query: 20  DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 199
           +  RHTCL+L+I         E IF+K TWFD+HF+LSIT G  AW C ASE E+++RA 
Sbjct: 3   EKKRHTCLKLQIN------GEEAIFVKGTWFDTHFNLSITDGFTAWYCYASEEELKQRAA 56

Query: 200 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 379
           QWDQPVSEY++ +E YLGF+Q GSIY+F DAG+G+KRLSWTFEK G  L WRWKC  SP+
Sbjct: 57  QWDQPVSEYVQLSESYLGFQQHGSIYAFADAGDGHKRLSWTFEKGGMTLHWRWKCMQSPD 116

Query: 380 NKNTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIYA 559
            K TT +ILDFLMDANIRLSEEVVRK+  FE+ KVEAEKCLAQSE+  NE+ +FE  IY 
Sbjct: 117 CKKTTAQILDFLMDANIRLSEEVVRKTDLFEKTKVEAEKCLAQSERIANERVDFESQIYT 176

Query: 560 KFIGVLNSKKAKLRELRDQQSKQEATGKLPQXXXXXXXXXXXXXXXXXXXXXXXXPTKNL 739
           KF+GVLNSKKAKLRELRDQ SKQ+   K PQ                        P K +
Sbjct: 177 KFLGVLNSKKAKLRELRDQLSKQDNADKSPQ--EEDTDKTESFDEESDNDLSNEDPQKCI 234

Query: 740 IGTSKKVPETRPHSQKRGTHN 802
             +SKKV   +P S+ R T N
Sbjct: 235 TSSSKKVGANKP-SRSRRTKN 254


>gb|EYU32990.1| hypothetical protein MIMGU_mgv1a012190mg [Mimulus guttatus]
          Length = 259

 Score =  290 bits (742), Expect = 6e-76
 Identities = 141/212 (66%), Positives = 169/212 (79%)
 Frame = +2

Query: 17  MDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERA 196
           MD+ RHTCL+L+I   A     E +F+K TW  + FDLSIT GL AW C+A+E EV+ERA
Sbjct: 1   MDTPRHTCLKLDIRV-AGGGVAEPVFVKGTWHPTRFDLSITDGLHAWNCHATEEEVKERA 59

Query: 197 NQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSP 376
           + WDQ VS+Y++ AERYLGF+Q GS+Y F DAGNG KRLSWTFEK+GTKLEWRWKC+PS 
Sbjct: 60  SSWDQTVSDYLDLAERYLGFQQSGSVYGFSDAGNGSKRLSWTFEKEGTKLEWRWKCQPSS 119

Query: 377 NNKNTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIY 556
           + K TT ++LDFLMDANIRLSEEVV K QSF+ LK+EAEKCLAQSEK  +EK+EFE  IY
Sbjct: 120 DCKKTTAQVLDFLMDANIRLSEEVVWKMQSFDTLKLEAEKCLAQSEKLSSEKSEFESEIY 179

Query: 557 AKFIGVLNSKKAKLRELRDQQSKQEATGKLPQ 652
            KF+ VLN+KKAKLRELRD+ SKQ  T  LP+
Sbjct: 180 GKFVNVLNTKKAKLRELRDRLSKQGTTHHLPE 211


>ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatula]
           gi|355479842|gb|AES61045.1| DNA repair protein XRCC4
           [Medicago truncatula]
          Length = 256

 Score =  288 bits (738), Expect = 2e-75
 Identities = 140/211 (66%), Positives = 165/211 (78%)
 Frame = +2

Query: 20  DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 199
           +  RHTCL+L++TE       E IF+K TWF++HF+LSIT G  +W CNASE EV++RA 
Sbjct: 3   EKKRHTCLKLQLTEE------ESIFVKGTWFNTHFNLSITDGSTSWHCNASEDEVKQRAA 56

Query: 200 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 379
           QWDQPV EY+E +ERYLGF+QP S+Y+F DAG+ +KRLSWTFEK G  L WRWKC  SP+
Sbjct: 57  QWDQPVEEYVELSERYLGFQQPESVYAFADAGDAHKRLSWTFEKGGMTLHWRWKCMKSPD 116

Query: 380 NKNTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIYA 559
            K TT EILDFLMDANIRLSEEVV K++ FE+ KVEAEKCLAQSE+  NE+ EFE  IY 
Sbjct: 117 CKKTTAEILDFLMDANIRLSEEVVIKTELFEKTKVEAEKCLAQSERIANERVEFESQIYT 176

Query: 560 KFIGVLNSKKAKLRELRDQQSKQEATGKLPQ 652
           KF+GVLNSKKAKLRELRDQ SKQ    K PQ
Sbjct: 177 KFLGVLNSKKAKLRELRDQLSKQGNGDKSPQ 207


>gb|ADE76390.1| unknown [Picea sitchensis]
          Length = 334

 Score =  280 bits (716), Expect = 7e-73
 Identities = 135/209 (64%), Positives = 164/209 (78%)
 Frame = +2

Query: 17  MDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERA 196
           M ++  TC+R+E    A   N +VI++K+TWF +HF LSIT GL AWIC+ SE  V +RA
Sbjct: 1   MAASADTCVRIE----ANGANRDVIYVKSTWFPTHFSLSITDGLHAWICDGSEKNVADRA 56

Query: 197 NQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSP 376
           +QWDQ VSEY+E A+RYL ++QPGS Y+  DAGNG  RLSWT EKQGTKLEWRWKC  +P
Sbjct: 57  SQWDQSVSEYLEDAQRYLSYQQPGSAYTIKDAGNGSIRLSWTLEKQGTKLEWRWKCDKAP 116

Query: 377 NNKNTTTEILDFLMDANIRLSEEVVRKSQSFERLKVEAEKCLAQSEKFKNEKAEFELAIY 556
           N +   ++ILDFLMDAN RLSEEVVRK++SF+R+KVEAEKCLAQSEKFKNEKAEFE  I+
Sbjct: 117 NEQKVISDILDFLMDANTRLSEEVVRKTRSFDRMKVEAEKCLAQSEKFKNEKAEFETTIF 176

Query: 557 AKFIGVLNSKKAKLRELRDQQSKQEATGK 643
           AKF+ VLNSKKAKLRELR++    E   K
Sbjct: 177 AKFVAVLNSKKAKLRELREKCLHSEPAKK 205