BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00027769
         (629 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus...   334   1e-89
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   325   9e-87
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     322   6e-86
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   322   7e-86
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   322   7e-86
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   321   1e-85
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     320   2e-85
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    320   2e-85
ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Caps...   320   2e-85
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   319   5e-85
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   318   6e-85
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   318   6e-85
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    318   6e-85
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]       318   8e-85
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   318   1e-84
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   318   1e-84
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   318   1e-84
gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]         317   2e-84
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha...   317   2e-84
gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops...   316   4e-84

>gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus guttatus]
          Length = 1196

 Score =  334 bits (857), Expect = 1e-89
 Identities = 158/207 (76%), Positives = 176/207 (85%)
 Frame = +3

Query: 6    RLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLA 185
            RLN+MLE+TD AFD+LTSSC +QGNTAA+MLSAGF+PQTEPHLRGML+SIR AQLGDL  
Sbjct: 696  RLNQMLEDTDTAFDVLTSSCTDQGNTAAIMLSAGFKPQTEPHLRGMLTSIRVAQLGDLRE 755

Query: 186  KARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXX 365
            +ARIFVPSGRWLMGCLDELGVLEHGQCFIQVS  SLE+CF KHGS FS   K ++     
Sbjct: 756  RARIFVPSGRWLMGCLDELGVLEHGQCFIQVSNPSLEDCFVKHGSEFSGAKKKLEVIKGL 815

Query: 366  XXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 545
                 NPCLHPGD+RILEA+D P LHHL DCLVFPQKG+RPHTNEASGSDLDGDLYFVTW
Sbjct: 816  VAIAKNPCLHPGDVRILEAVDCPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTW 875

Query: 546  DDNLIPPSKRSEPAMDYAPVEAKKLPR 626
            D+NL+PPSKRS   M+YAP E K+LPR
Sbjct: 876  DENLMPPSKRSWTPMEYAPGEVKQLPR 902


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  325 bits (832), Expect = 9e-87
 Identities = 155/206 (75%), Positives = 175/206 (84%)
 Frame = +3

Query: 9    LNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLAK 188
            LN+ML ++DVAFD++T+SCAE GNTAA+MLSAGF+PQ+EPHLRGMLSSIRA+QLGDL  K
Sbjct: 696  LNKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNK 755

Query: 189  ARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXXX 368
            ARIFVPSGRWLMGCLDELG LE GQCFIQVS+ SLENCF KHG  FS+  KN+Q      
Sbjct: 756  ARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLV 815

Query: 369  XXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWD 548
                NPCLHPGD+RILEA+DVP LHHL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWD
Sbjct: 816  VIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWD 875

Query: 549  DNLIPPSKRSEPAMDYAPVEAKKLPR 626
            +NLIPPSK+S   M+Y P E K+L R
Sbjct: 876  ENLIPPSKKSWIPMNYEPAEVKQLGR 901


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  322 bits (825), Expect = 6e-86
 Identities = 153/206 (74%), Positives = 175/206 (84%)
 Frame = +3

Query: 9    LNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLAK 188
            L++ML ++DVAFD++T+SCAE GNTAA+MLSAGF+PQ+EPHLRGMLSSIRA+QLGDL  K
Sbjct: 696  LDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNK 755

Query: 189  ARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXXX 368
            ARIFVPSGRWLMGCLDELG LE GQCFIQVS+ SLENCF KHG  FS+  KN+Q      
Sbjct: 756  ARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLV 815

Query: 369  XXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWD 548
                NPCLHPGD+RILEA+DVP LHHL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWD
Sbjct: 816  VIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWD 875

Query: 549  DNLIPPSKRSEPAMDYAPVEAKKLPR 626
            +NLIPPSK+S   M+Y P E K++ R
Sbjct: 876  ENLIPPSKKSWIPMNYEPAEVKQMGR 901


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  322 bits (824), Expect = 7e-86
 Identities = 153/206 (74%), Positives = 175/206 (84%)
 Frame = +3

Query: 9    LNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLAK 188
            L++ML ++DVAFD++T+SCAE GNTAA+MLSAGF+PQ+EPHLRGMLSSIRA+QLGDL  K
Sbjct: 696  LDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNK 755

Query: 189  ARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXXX 368
            ARIFVPSGRWLMGCLDELG LE GQCFIQVS+ SLENCF KHGS FS+  KN+Q      
Sbjct: 756  ARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGSKFSDIKKNLQVVKGLV 815

Query: 369  XXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWD 548
                NPCLHPGD+RILEA+DVP L HL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWD
Sbjct: 816  VIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWD 875

Query: 549  DNLIPPSKRSEPAMDYAPVEAKKLPR 626
            +N+IPPSK+S   M+Y P E K+L R
Sbjct: 876  ENIIPPSKKSWIPMNYEPAEVKQLGR 901


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score =  322 bits (824), Expect = 7e-86
 Identities = 156/207 (75%), Positives = 171/207 (82%)
 Frame = +3

Query: 6    RLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLA 185
            +LN+ML ++DVAFD+LT+SCAEQGN AA+MLSAGF+PQ EPHLRGML+ +RAAQL  L  
Sbjct: 695  KLNQMLVDSDVAFDVLTASCAEQGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLRE 754

Query: 186  KARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXX 365
            KARIFVPSGRWLMGCLDELGVLE GQCFIQVS S LENCF KHGS FSET KN+Q     
Sbjct: 755  KARIFVPSGRWLMGCLDELGVLEQGQCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGT 814

Query: 366  XXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 545
                 NPCLHPGDIRILEA+D P LHHL DCLVFPQKG+RPH NEASGSDLDGDLYFVTW
Sbjct: 815  VVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTW 874

Query: 546  DDNLIPPSKRSEPAMDYAPVEAKKLPR 626
            D+NLIPPSKRS   M Y   EAK+L R
Sbjct: 875  DENLIPPSKRSWIPMQYDAAEAKQLTR 901


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score =  321 bits (822), Expect = 1e-85
 Identities = 153/207 (73%), Positives = 175/207 (84%)
 Frame = +3

Query: 6    RLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLA 185
            +L+++L ++DVAFD++T+SCAE GNTAA+MLSAGF+PQ+EPHLRGML+SIRAAQLGDL  
Sbjct: 696  KLDKILVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLASIRAAQLGDLRN 755

Query: 186  KARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXX 365
            K R+FVPSGRWLMGCLDEL  LE GQCFIQVS+ SLE CF KHG  FSE  KN+Q     
Sbjct: 756  KTRMFVPSGRWLMGCLDELRKLEQGQCFIQVSSPSLETCFVKHGPKFSEIKKNLQVIKGL 815

Query: 366  XXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 545
                 NPCLHPGD+RILEA+DVP LHHL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTW
Sbjct: 816  VVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTW 875

Query: 546  DDNLIPPSKRSEPAMDYAPVEAKKLPR 626
            D+NLIPPSK+S   MDYAP EAK+L R
Sbjct: 876  DENLIPPSKKSWMPMDYAPAEAKQLGR 902


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  320 bits (821), Expect = 2e-85
 Identities = 153/206 (74%), Positives = 174/206 (84%)
 Frame = +3

Query: 9    LNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLAK 188
            L++ML ++DVAFD++T+SCAE GNTAA+MLSAGF+PQ+EPHLRGMLSSIRA+QLGDL  K
Sbjct: 696  LDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNK 755

Query: 189  ARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXXX 368
            ARIFVPSGRWLMGCLDELG LE GQCFIQVS+ SLENCF KHG  FS+  KN+Q      
Sbjct: 756  ARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLV 815

Query: 369  XXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWD 548
                NPCLHPGD+RILEA+DVP L HL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWD
Sbjct: 816  VIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWD 875

Query: 549  DNLIPPSKRSEPAMDYAPVEAKKLPR 626
            +NLIPPSK+S   M+Y P E K+L R
Sbjct: 876  ENLIPPSKKSWIPMNYEPAEVKQLGR 901


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  320 bits (821), Expect = 2e-85
 Identities = 153/206 (74%), Positives = 174/206 (84%)
 Frame = +3

Query: 9    LNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLAK 188
            L++ML ++DVAFD++T+SCAE GNTAA+MLSAGF+PQ+EPHLRGMLSSIRA+QLGDL  K
Sbjct: 696  LDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNK 755

Query: 189  ARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXXX 368
            ARIFVPSGRWLMGCLDELG LE GQCFIQVS+ SLENCF KHG  FS+  KN+Q      
Sbjct: 756  ARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLV 815

Query: 369  XXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWD 548
                NPCLHPGD+RILEA+DVP L HL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWD
Sbjct: 816  VIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWD 875

Query: 549  DNLIPPSKRSEPAMDYAPVEAKKLPR 626
            +NLIPPSK+S   M+Y P E K+L R
Sbjct: 876  ENLIPPSKKSWIPMNYEPAEVKQLGR 901


>ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Capsella rubella]
            gi|482559225|gb|EOA23416.1| hypothetical protein
            CARUB_v10016597mg [Capsella rubella]
          Length = 1197

 Score =  320 bits (820), Expect = 2e-85
 Identities = 148/209 (70%), Positives = 174/209 (83%)
 Frame = +3

Query: 3    CRLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLL 182
            C+LN +L++TDVAF++LT+SCAEQGNTAA+MLSAGF+P+TEPHLRGMLSS+R AQL DL 
Sbjct: 693  CKLNRILDDTDVAFEVLTASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWDLR 752

Query: 183  AKARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXX 362
             K+RIFV SGRWLMGCLDE G+LE G+CFIQVS  S++NCFSKHGS F ET  ++Q    
Sbjct: 753  EKSRIFVTSGRWLMGCLDEAGILEEGKCFIQVSKPSIKNCFSKHGSRFKETKTDLQVVKG 812

Query: 363  XXXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVT 542
                  NPCLHPGD+RILEA+DVP+LHH+ DCL+FPQKGDRPHTNEASGSDLDGDLYFV 
Sbjct: 813  YVAVAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVA 872

Query: 543  WDDNLIPPSKRSEPAMDYAPVEAKKLPRA 629
            WD  L+PPS++S PAM Y   EAK L RA
Sbjct: 873  WDQKLVPPSQKSFPAMHYDAAEAKSLGRA 901


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  319 bits (817), Expect = 5e-85
 Identities = 155/207 (74%), Positives = 170/207 (82%)
 Frame = +3

Query: 6    RLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLA 185
            +LN+M  + DVAFD++T+SCAEQGNTAA+MLSAGF P+TEPHL GML+ IRAAQL  L  
Sbjct: 695  KLNQMFMDADVAFDVVTASCAEQGNTAAIMLSAGFNPKTEPHLCGMLTCIRAAQLWGLRE 754

Query: 186  KARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXX 365
            K RIFVPSGRWLMGCLDELGVLEHGQCFIQVS  SLE+CF KHGS FSE+ K +Q     
Sbjct: 755  KTRIFVPSGRWLMGCLDELGVLEHGQCFIQVSNPSLESCFWKHGSRFSESKKKLQVVKGT 814

Query: 366  XXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 545
                 NPCLHPGDIRILEA+D PELHHL DCLVFPQKGDRPHTNEASGSDLDGDLYFVTW
Sbjct: 815  VVVAKNPCLHPGDIRILEAVDAPELHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 874

Query: 546  DDNLIPPSKRSEPAMDYAPVEAKKLPR 626
            D+NLIPPSKRS   M Y   EAK+L R
Sbjct: 875  DENLIPPSKRSWLPMQYDAAEAKQLNR 901


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
            sinensis]
          Length = 1025

 Score =  318 bits (816), Expect = 6e-85
 Identities = 156/207 (75%), Positives = 173/207 (83%)
 Frame = +3

Query: 6    RLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLA 185
            +LN+ML ++DVAF++LT++CAEQGNTAA+MLSAGF PQTEPHLRGML+ IRAAQL  L  
Sbjct: 696  KLNQMLVDSDVAFEVLTAACAEQGNTAAIMLSAGFNPQTEPHLRGMLTCIRAAQLWGLRE 755

Query: 186  KARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXX 365
            KARIFVP+GRWLMGCLDELGVLE GQCFIQVS   L NCFSKHGS F+E TK +Q     
Sbjct: 756  KARIFVPAGRWLMGCLDELGVLEGGQCFIQVSEPFLGNCFSKHGSRFAE-TKKLQVIKGF 814

Query: 366  XXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 545
                 NPCLHPGDIRILEA+D PELHHL DCLVFPQKGDRPHTNEASGSDLDGDLYFVTW
Sbjct: 815  VVIAKNPCLHPGDIRILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 874

Query: 546  DDNLIPPSKRSEPAMDYAPVEAKKLPR 626
            D+NLIPPSK+S P M+Y   EAK L R
Sbjct: 875  DENLIPPSKKSWPPMEYNAAEAKTLTR 901


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score =  318 bits (816), Expect = 6e-85
 Identities = 156/207 (75%), Positives = 173/207 (83%)
 Frame = +3

Query: 6    RLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLA 185
            +LN+ML ++DVAF++LT++CAEQGNTAA+MLSAGF PQTEPHLRGML+ IRAAQL  L  
Sbjct: 696  KLNQMLVDSDVAFEVLTAACAEQGNTAAIMLSAGFNPQTEPHLRGMLTCIRAAQLWGLRE 755

Query: 186  KARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXX 365
            KARIFVP+GRWLMGCLDELGVLE GQCFIQVS   L NCFSKHGS F+E TK +Q     
Sbjct: 756  KARIFVPAGRWLMGCLDELGVLEGGQCFIQVSEPFLGNCFSKHGSRFAE-TKKLQVIKGF 814

Query: 366  XXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 545
                 NPCLHPGDIRILEA+D PELHHL DCLVFPQKGDRPHTNEASGSDLDGDLYFVTW
Sbjct: 815  VVIAKNPCLHPGDIRILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 874

Query: 546  DDNLIPPSKRSEPAMDYAPVEAKKLPR 626
            D+NLIPPSK+S P M+Y   EAK L R
Sbjct: 875  DENLIPPSKKSWPPMEYNAAEAKTLTR 901


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  318 bits (816), Expect = 6e-85
 Identities = 152/206 (73%), Positives = 174/206 (84%)
 Frame = +3

Query: 9    LNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLAK 188
            L++ML ++DVAFD++T+SCAE GNTAA+MLSAGF+PQ+EPHLRGMLSSIRA+QLGDL  K
Sbjct: 696  LDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNK 755

Query: 189  ARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXXX 368
            ARIFVPSGRWLMGCLDELG LE GQCFIQVS+ SLENCF KHG  FS+  +N+Q      
Sbjct: 756  ARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGPKFSDIKQNLQVVKGLV 815

Query: 369  XXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWD 548
                NPCLHPGD+RILEA+DVP L HL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWD
Sbjct: 816  VIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWD 875

Query: 549  DNLIPPSKRSEPAMDYAPVEAKKLPR 626
            +NLIPPSK+S   M+Y P E K+L R
Sbjct: 876  ENLIPPSKKSWIPMNYEPAEVKQLGR 901


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score =  318 bits (815), Expect = 8e-85
 Identities = 152/207 (73%), Positives = 170/207 (82%)
 Frame = +3

Query: 6    RLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLA 185
            +LN+ML + DVAF++LT+SC EQGN  A+MLSAGF+PQ+EPHL+GML+ IRAAQL  L  
Sbjct: 691  KLNQMLTDADVAFNVLTASCPEQGNVGAIMLSAGFKPQSEPHLQGMLTCIRAAQLWGLRE 750

Query: 186  KARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXX 365
            KARIFVP GRWLMGCLDELGVLE GQCFIQVST SLENCFSKHGS FSET  N++     
Sbjct: 751  KARIFVPLGRWLMGCLDELGVLEQGQCFIQVSTPSLENCFSKHGSRFSETKNNLEVIKGF 810

Query: 366  XXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 545
                 NPCLHPGDIRILEA+DVP LHHL DCLVFPQKGDRPH NEASGSDLDGDLYFVTW
Sbjct: 811  VVIAKNPCLHPGDIRILEAVDVPGLHHLYDCLVFPQKGDRPHANEASGSDLDGDLYFVTW 870

Query: 546  DDNLIPPSKRSEPAMDYAPVEAKKLPR 626
            D+NLIPPSK+S   M Y P + + LPR
Sbjct: 871  DENLIPPSKKSWNPMQYDPAKPRTLPR 897


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
            vesca]
          Length = 1197

 Score =  318 bits (814), Expect = 1e-84
 Identities = 151/203 (74%), Positives = 170/203 (83%)
 Frame = +3

Query: 6    RLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLA 185
            +L +ML +TDVAFD+LT+SCAEQGN+AA+MLSAGF+PQTEPHLRGML+ I+AAQL  L  
Sbjct: 695  KLKQMLVDTDVAFDVLTASCAEQGNSAAIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLRE 754

Query: 186  KARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXX 365
            K RIFVPSGRWLMGCLDELGVLE GQCF+QVST SLENCF+KHGS F +T KN+Q     
Sbjct: 755  KTRIFVPSGRWLMGCLDELGVLEQGQCFVQVSTPSLENCFAKHGSRFDQTDKNLQVIKGF 814

Query: 366  XXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 545
                 NPCLHPGDIRILEA+D P LHHL DCLVFPQKG RPHT+EASGSDLDGDLYFVTW
Sbjct: 815  VVVAKNPCLHPGDIRILEAVDAPGLHHLHDCLVFPQKGHRPHTDEASGSDLDGDLYFVTW 874

Query: 546  DDNLIPPSKRSEPAMDYAPVEAK 614
            D+NLIPP K+S   M+Y P EAK
Sbjct: 875  DENLIPPRKKSWQPMEYEPAEAK 897


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score =  318 bits (814), Expect = 1e-84
 Identities = 152/207 (73%), Positives = 174/207 (84%)
 Frame = +3

Query: 6    RLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLA 185
            +L+++L ++DVAFD++T+SCAE GNTAA+MLSAGF+PQ+EPHLRGML+SIRAAQLGDL  
Sbjct: 695  KLDKILVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLASIRAAQLGDLRN 754

Query: 186  KARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXX 365
            K R+FV SGRWLMGCLDELG LE GQCFIQVS+ SLE CF KHG  FSE  KN+Q     
Sbjct: 755  KTRMFVTSGRWLMGCLDELGELEQGQCFIQVSSPSLETCFVKHGPEFSEIKKNLQVVKGL 814

Query: 366  XXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 545
                 NPCLHPGD+RILEA+DVP LHHL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTW
Sbjct: 815  VVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTW 874

Query: 546  DDNLIPPSKRSEPAMDYAPVEAKKLPR 626
            D+NLIPPSK+S   M YAP EAK+L R
Sbjct: 875  DENLIPPSKKSWMPMAYAPAEAKQLGR 901


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  318 bits (814), Expect = 1e-84
 Identities = 151/207 (72%), Positives = 169/207 (81%)
 Frame = +3

Query: 6    RLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLA 185
            +LN+M  N+DVAFD+LT+SCA+QGN AA+MLSAGF+P  EPHLRGML+ +RAAQL DL  
Sbjct: 698  KLNQMFVNSDVAFDVLTASCADQGNVAAIMLSAGFKPDREPHLRGMLTCVRAAQLWDLRE 757

Query: 186  KARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXX 365
            K RIFVPSGRWLMGCLDELG+LE GQCFIQVS SSLE CF KHG+ FSE  KN+Q     
Sbjct: 758  KTRIFVPSGRWLMGCLDELGMLEQGQCFIQVSNSSLEKCFMKHGAKFSEAEKNLQVIKGT 817

Query: 366  XXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 545
                 NPCLHPGD+R+LEA+DVP LHHL DCLVFPQKG+RPHTNEASGSDLDGDLYFVTW
Sbjct: 818  VVIAKNPCLHPGDVRVLEAVDVPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTW 877

Query: 546  DDNLIPPSKRSEPAMDYAPVEAKKLPR 626
            D+NLIPPSKRS   M Y   EAK L R
Sbjct: 878  DENLIPPSKRSWIPMQYDAAEAKLLAR 904


>gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]
          Length = 1195

 Score =  317 bits (812), Expect = 2e-84
 Identities = 150/205 (73%), Positives = 171/205 (83%)
 Frame = +3

Query: 6    RLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLA 185
            +L++M+E+ DVAF++L +SC+EQGN+AA+MLSAGF P TEPHLRGML+SIRAAQL  L  
Sbjct: 696  KLHKMVEDPDVAFEVLLASCSEQGNSAAIMLSAGFNPLTEPHLRGMLASIRAAQLWGLRE 755

Query: 186  KARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXX 365
            KARIFVPSGRWLMGCLDEL VLE GQCFIQVS  SL+NCFSKHGS FSE  +N++     
Sbjct: 756  KARIFVPSGRWLMGCLDELAVLEQGQCFIQVSGPSLQNCFSKHGSRFSEIQRNLEVVKGF 815

Query: 366  XXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 545
                 NPCLHPGDIRILEA+D P+LHHL DCLVFPQKGDRPHTNEASGSDLDGDLYFVTW
Sbjct: 816  VVIAKNPCLHPGDIRILEAVDAPDLHHLCDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 875

Query: 546  DDNLIPPSKRSEPAMDYAPVEAKKL 620
            D+NL+PPSKRS   MDY P + K L
Sbjct: 876  DENLVPPSKRSWTPMDYEPADTKTL 900


>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
            gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
            Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
            AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
            Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
            Full=RNA-directed RNA polymerase 6
            gi|12324444|gb|AAG52184.1|AC012329_11 putative
            RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
            thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
            polymerase-like protein [Arabidopsis thaliana]
            gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
            gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
            6 [Arabidopsis thaliana]
          Length = 1196

 Score =  317 bits (812), Expect = 2e-84
 Identities = 147/208 (70%), Positives = 172/208 (82%)
 Frame = +3

Query: 6    RLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLA 185
            +LN +L++TDVAF++LT+SCAEQGNTAA+MLSAGF+P+TEPHLRGMLSS+R AQL  L  
Sbjct: 694  KLNRILDDTDVAFEVLTASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLRE 753

Query: 186  KARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXX 365
            K+RIFV SGRWLMGCLDE G+LEHGQCFIQVS  S+ENCFSKHGS F ET  +++     
Sbjct: 754  KSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGY 813

Query: 366  XXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 545
                 NPCLHPGD+RILEA+DVP+LHH+ DCL+FPQKGDRPHTNEASGSDLDGDLYFV W
Sbjct: 814  VAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAW 873

Query: 546  DDNLIPPSKRSEPAMDYAPVEAKKLPRA 629
            D  LIPP+++S PAM Y   E K L RA
Sbjct: 874  DQKLIPPNRKSYPAMHYDAAEEKSLGRA 901


>gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana]
          Length = 1196

 Score =  316 bits (809), Expect = 4e-84
 Identities = 147/208 (70%), Positives = 172/208 (82%)
 Frame = +3

Query: 6    RLNEMLENTDVAFDILTSSCAEQGNTAAMMLSAGFQPQTEPHLRGMLSSIRAAQLGDLLA 185
            +L+ +L +TDVAF++LT+SCAEQGNTAA+MLSAGF+P+TEPHLRGMLSS+R AQL  L  
Sbjct: 694  KLDRILVDTDVAFEVLTASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLRE 753

Query: 186  KARIFVPSGRWLMGCLDELGVLEHGQCFIQVSTSSLENCFSKHGSGFSETTKNVQXXXXX 365
            K+RIFV SGRWLMGCLDE G+LEHGQCFIQVS  S+ENCFSKHGS F ET K+++     
Sbjct: 754  KSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKKDLEVVKGY 813

Query: 366  XXXXXNPCLHPGDIRILEAIDVPELHHLVDCLVFPQKGDRPHTNEASGSDLDGDLYFVTW 545
                 NPCLHPGD+RILEA+DVP+LHH+ DCL+FPQKGDRPHTNEASGSDLDGDLYFV W
Sbjct: 814  VAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAW 873

Query: 546  DDNLIPPSKRSEPAMDYAPVEAKKLPRA 629
            D  LIPP+++S PAM Y   E K L RA
Sbjct: 874  DQKLIPPNRKSYPAMHYDAAEEKSLGRA 901