BLASTX nr result

ID: Akebia25_contig00017617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00017617
         (259 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC20557.1| DNA ligase 1 [Morus notabilis]                          58   2e-06
emb|CAN66728.1| hypothetical protein VITISV_041957 [Vitis vinifera]    57   4e-06
ref|XP_004305525.1| PREDICTED: uncharacterized protein LOC101304...    56   5e-06
ref|XP_006482181.1| PREDICTED: DNA ligase 1-like isoform X1 [Cit...    55   8e-06
ref|XP_006430691.1| hypothetical protein CICLE_v10010910mg [Citr...    55   8e-06

>gb|EXC20557.1| DNA ligase 1 [Morus notabilis]
          Length = 1402

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = +2

Query: 2    RFIRVVPDRRVEDCSTAIDIANMFHSQTRKMDVSVE 109
            RFIR V DR+ E CSTA DIA MFHSQTRKMDV+VE
Sbjct: 1366 RFIRSVSDRKPEACSTAADIAEMFHSQTRKMDVAVE 1401


>emb|CAN66728.1| hypothetical protein VITISV_041957 [Vitis vinifera]
          Length = 272

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +2

Query: 2   RFIRVVPDRRVEDCSTAIDIANMFHSQTRKMDVS 103
           RFIR + DRR E+CSTA DIA+MFHSQTRKMDV+
Sbjct: 236 RFIRPIMDRRPEECSTAADIADMFHSQTRKMDVT 269


>ref|XP_004305525.1| PREDICTED: uncharacterized protein LOC101304313 [Fragaria vesca
            subsp. vesca]
          Length = 1389

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = +2

Query: 2    RFIRVVPDRRVEDCSTAIDIANMFHSQTRKMDVSVE 109
            R+IR V DR+ E+CSTA DIA MFHSQTRKMDV+ E
Sbjct: 1351 RYIRTVTDRKPEECSTASDIAEMFHSQTRKMDVASE 1386


>ref|XP_006482181.1| PREDICTED: DNA ligase 1-like isoform X1 [Citrus sinensis]
          Length = 1402

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = +2

Query: 2    RFIRVVPDRRVEDCSTAIDIANMFHSQTRKMDVSVE 109
            RFIR+V DR  ++CSTA DIA MFHSQTRKMDV+ +
Sbjct: 1366 RFIRLVSDRNPDECSTAADIAEMFHSQTRKMDVTAK 1401


>ref|XP_006430691.1| hypothetical protein CICLE_v10010910mg [Citrus clementina]
            gi|557532748|gb|ESR43931.1| hypothetical protein
            CICLE_v10010910mg [Citrus clementina]
          Length = 1402

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = +2

Query: 2    RFIRVVPDRRVEDCSTAIDIANMFHSQTRKMDVSVE 109
            RFIR+V DR  ++CSTA DIA MFHSQTRKMDV+ +
Sbjct: 1366 RFIRLVSDRNPDECSTAADIAEMFHSQTRKMDVTAK 1401


Top