BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00013915
         (1057 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX95950.1| retrotransposon protein, putative, Ty3-gypsy sub-...    59   4e-06

>gb|AAX95950.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77550294|gb|ABA93091.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 901

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
 Frame = -2

Query: 1041 SKLWFHTTFHPQTNGQTLVINRPL**LGSIVRVMNKR--RNSGKVTTYGPFTVMV*RVGL 868
            +KL F TT HPQT+GQT V+NR    LG+++R + K+  + S +   +  F         
Sbjct: 476  TKLLFSTTCHPQTDGQTEVVNRT---LGTMLRAILKKKLKMSEECLPHVEFAYNRATRST 532

Query: 867  QRVTPFEVIYGSSPSDLVDLAPL*TIQLMSADAEVLAENIV 745
             +V+PF+++YG +P   +D+ PL T + +  DA+  AE I+
Sbjct: 533  TKVSPFQIVYGFNPRAPIDILPLPTSERVHNDAKARAEFIL 573