BLASTX nr result

ID: Akebia24_contig00048466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00048466
         (333 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06
emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]    55   8e-06

>ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera] gi|296084392|emb|CBI24780.3| unnamed
           protein product [Vitis vinifera]
          Length = 890

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = +3

Query: 156 MRRSTVIINPGEFV-IFLNPFKRPXXXXXXIAPLPETLTLETESIDLSSQVLSILARPGW 332
           MR+S  II PGE++ I L P+         IA LP+ L+L++E +DLS+Q+LSIL+RP W
Sbjct: 1   MRKSAAIIKPGEYLLILLKPYSS-------IASLPQILSLDSEPVDLSAQLLSILSRPNW 53


>emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = +3

Query: 156 MRRSTVIINPGEFV-IFLNPFKRPXXXXXXIAPLPETLTLETESIDLSSQVLSILARPGW 332
           MR+S  II PGE++ I L P+         IA LP+ L+L++E +DLS+Q+LSIL+RP W
Sbjct: 1   MRKSAAIIKPGEYLLILLKPYSS-------IASLPQILSLDSEPVDLSAQLLSILSRPNW 53


Top