BLASTX nr result
ID: Akebia24_contig00048396
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00048396
(316 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 43 7e-08
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 41 1e-07
ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256... 44 1e-07
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 40 3e-07
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 40 4e-07
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 40 6e-07
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 40 6e-07
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 43 6e-07
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 40 1e-06
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 40 2e-06
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659... 40 2e-06
ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261... 45 2e-06
ref|XP_006584391.1| PREDICTED: uncharacterized protein LOC102663... 41 2e-06
ref|XP_004237698.1| PREDICTED: uncharacterized protein LOC101249... 42 2e-06
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 44 4e-06
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 39 6e-06
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 43.1 bits (100), Expect(2) = 7e-08
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = -2
Query: 105 AFIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
AFIK R + +NLLLA ELV+ YH++ SSR A+KI
Sbjct: 711 AFIKDRLMMENLLLASELVKDYHKESISSRSALKI 745
Score = 38.9 bits (89), Expect(2) = 7e-08
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = -1
Query: 199 SELSDFRSISCGNALYKIISKVLPNRISQV 110
S + D+R ISC N LYKI+SK++ NR+ ++
Sbjct: 671 SGMKDYRPISCCNVLYKIVSKLMANRLKEI 700
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 40.8 bits (94), Expect(2) = 1e-07
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = -1
Query: 196 ELSDFRSISCGNALYKIISKVLPNRISQV 110
E+ D+R ISC N LYK+ISK++ NR+ +V
Sbjct: 43 EIKDYRPISCCNVLYKVISKIIANRLKRV 71
Score = 40.8 bits (94), Expect(2) = 1e-07
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = -2
Query: 105 AFIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
AFIK R + +NLLLA ELV+ YH+ S R A+KI
Sbjct: 82 AFIKDRLLIENLLLATELVKDYHKDSVSERCAIKI 116
>ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum
lycopersicum]
Length = 421
Score = 43.5 bits (101), Expect(2) = 1e-07
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = -2
Query: 102 FIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
FI GR IS+N+LLAHELV +Y RK S R +KI
Sbjct: 218 FILGRKISENILLAHELVNSYTRKNISPRSMLKI 251
Score = 37.7 bits (86), Expect(2) = 1e-07
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -1
Query: 211 IELPSELSDFRSISCGNALYKIISKVLPNRISQV 110
++ P + ++R+I+C LYKIISKV+ NR+ V
Sbjct: 173 VQSPKNVKEYRTITCCTVLYKIISKVITNRMHDV 206
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 40.0 bits (92), Expect(2) = 3e-07
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2
Query: 105 AFIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
AF+K R + +NLLLA ELV+ YH+ S+R A+KI
Sbjct: 564 AFVKDRLLIENLLLATELVKDYHKDTISTRCAIKI 598
Score = 39.7 bits (91), Expect(2) = 3e-07
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -1
Query: 196 ELSDFRSISCGNALYKIISKVLPNRISQV 110
E+ D+R ISC N LYK+ISK++ NR+ V
Sbjct: 525 EMKDYRPISCCNVLYKVISKIIANRLKLV 553
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 39.7 bits (91), Expect(2) = 4e-07
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -1
Query: 196 ELSDFRSISCGNALYKIISKVLPNRISQV 110
E+ D+R ISC N +YK+ISK++ NR+ V
Sbjct: 940 EMKDYRPISCCNVIYKVISKIIANRLKHV 968
Score = 39.7 bits (91), Expect(2) = 4e-07
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -2
Query: 105 AFIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
AF+K R + +NLLLA ELV+ YH+ S R A+KI
Sbjct: 979 AFVKDRLLIENLLLATELVKDYHKDTISGRCAIKI 1013
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 39.7 bits (91), Expect(2) = 6e-07
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -1
Query: 196 ELSDFRSISCGNALYKIISKVLPNRISQV 110
E+ D+R ISC N LYK+ISK++ NR+ V
Sbjct: 413 EMKDYRPISCCNVLYKVISKIIANRLKLV 441
Score = 39.3 bits (90), Expect(2) = 6e-07
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = -2
Query: 105 AFIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
AF+K R + +N+LLA E+V+ YH+ SSR A+KI
Sbjct: 452 AFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKI 486
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 40.4 bits (93), Expect(2) = 6e-07
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2
Query: 105 AFIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
AF+K R + +NLLLA ELV+ YH+ S+R A+KI
Sbjct: 211 AFVKDRLLIENLLLATELVKDYHKDSISARCAIKI 245
Score = 38.5 bits (88), Expect(2) = 6e-07
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -1
Query: 196 ELSDFRSISCGNALYKIISKVLPNRI 119
E+ D+R ISC N LYK+ISK++ NR+
Sbjct: 172 EMRDYRPISCCNVLYKVISKIIANRL 197
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 42.7 bits (99), Expect(2) = 6e-07
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = -2
Query: 105 AFIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
AF+K R + +NLLLA ELV+ YH++ SSR A+KI
Sbjct: 91 AFVKDRLLIENLLLATELVKDYHKESVSSRCAIKI 125
Score = 36.2 bits (82), Expect(2) = 6e-07
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = -1
Query: 193 LSDFRSISCGNALYKIISKVLPNRISQV 110
+S +R +SC N +YKIISK++ NR+ V
Sbjct: 53 ISHYRPLSCCNVIYKIISKIIANRLKMV 80
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 39.7 bits (91), Expect(2) = 1e-06
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -1
Query: 196 ELSDFRSISCGNALYKIISKVLPNRISQV 110
E+ D+R ISC N LYK ISK+L NR+ ++
Sbjct: 246 EIKDYRPISCCNVLYKAISKILANRLKRI 274
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = -2
Query: 105 AFIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
AF+K R + +N+LLA ELV+ YH+ S+R A+KI
Sbjct: 285 AFVKDRLLIENVLLATELVKDYHKDSISTRCAMKI 319
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 39.7 bits (91), Expect(2) = 2e-06
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -1
Query: 196 ELSDFRSISCGNALYKIISKVLPNRI 119
E+ D+R ISC N LYK+ISK+L NR+
Sbjct: 822 EMKDYRPISCCNVLYKVISKILANRL 847
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = -2
Query: 105 AFIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
AF+K R + +N+LLA ELV+ YH++ + R A+KI
Sbjct: 861 AFVKERLLMENVLLATELVKDYHKESVTPRCAMKI 895
>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
Length = 964
Score = 40.4 bits (93), Expect(2) = 2e-06
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -1
Query: 199 SELSDFRSISCGNALYKIISKVLPNRISQV 110
S+++ FR ISC N LYKI+SK+L NRI+ V
Sbjct: 880 SQVNHFRPISCCNLLYKIVSKILANRIAPV 909
Score = 37.0 bits (84), Expect(2) = 2e-06
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -2
Query: 105 AFIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
AFIK R + DN+ L E++R Y RK+ S R +KI
Sbjct: 920 AFIKNRKMMDNIFLVQEILRKYARKRPSPRCLLKI 954
>ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261795 [Solanum
lycopersicum]
Length = 413
Score = 45.1 bits (105), Expect(2) = 2e-06
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = -2
Query: 102 FIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
FI GR I+DN++LAHELV+TY RK S R +KI
Sbjct: 351 FIPGRKIADNIILAHELVKTYTRKNISPRIILKI 384
Score = 32.3 bits (72), Expect(2) = 2e-06
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 211 IELPSELSDFRSISCGNALYKIISKVLPNRISQV 110
++ P + ++ I+C LYKIISKV+ R+ V
Sbjct: 306 VQCPKTVKEYTPIACCTVLYKIISKVITRRMHDV 339
>ref|XP_006584391.1| PREDICTED: uncharacterized protein LOC102663359 [Glycine max]
Length = 272
Score = 40.8 bits (94), Expect(2) = 2e-06
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -1
Query: 199 SELSDFRSISCGNALYKIISKVLPNRISQV 110
S+++ FR ISC N LYKI+SK+L NRI+ V
Sbjct: 188 SQVNHFRPISCYNLLYKIVSKILANRIASV 217
Score = 36.6 bits (83), Expect(2) = 2e-06
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -2
Query: 105 AFIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
AFIK R + DN+ L E++ Y RK++SSR +KI
Sbjct: 228 AFIKNRKMMDNIFLVQEILCKYARKRSSSRCLLKI 262
>ref|XP_004237698.1| PREDICTED: uncharacterized protein LOC101249454 [Solanum
lycopersicum]
Length = 225
Score = 41.6 bits (96), Expect(2) = 2e-06
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = -2
Query: 102 FIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
FI GR I+DN++L HELV+ Y RK S R +KI
Sbjct: 190 FIPGRKIADNIVLTHELVKAYTRKHISPRSMLKI 223
Score = 35.4 bits (80), Expect(2) = 2e-06
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 202 PSELSDFRSISCGNALYKIISKVLPNRISQV 110
P + ++R+I+C LY IISKVL NR+ V
Sbjct: 148 PETVKEYRTIACCTVLYNIISKVLTNRLHSV 178
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 44.3 bits (103), Expect(2) = 4e-06
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = -2
Query: 105 AFIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
AF+KGR I DN++L+HELV++Y RK S R VKI
Sbjct: 232 AFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKI 266
Score = 32.0 bits (71), Expect(2) = 4e-06
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -1
Query: 199 SELSDFRSISCGNALYKIISKVLPNRISQV 110
+ + +FR I+C + +YKIISK+L +R+ V
Sbjct: 192 TSVKNFRPIACCSVIYKIISKILTSRMQGV 221
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 38.9 bits (89), Expect(2) = 6e-06
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -1
Query: 196 ELSDFRSISCGNALYKIISKVLPNRI 119
E+ D+R ISC N +YK+ISK+L NR+
Sbjct: 78 EMKDYRPISCCNVMYKVISKILANRL 103
Score = 36.6 bits (83), Expect(2) = 6e-06
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -2
Query: 105 AFIKGRNISDNLLLAHELVRTYHRKKTSSRRAVKI 1
+F+K R + +N+LLA +LV+ YH+ S R A+KI
Sbjct: 117 SFVKDRLLIENVLLATDLVKDYHKDSISERCAIKI 151