BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00048320
         (345 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA54615.1| 98.8kD polyprotein [Strawberry latent ringspot v...   137   2e-30
gb|AHB30925.1| coat protein, partial [Strawberry latent ringspot...   137   2e-30
gb|ADN88405.1| polyprotein, partial [Strawberry latent ringspot ...   137   2e-30
gb|ADN88403.1| polyprotein, partial [Strawberry latent ringspot ...   137   2e-30
gb|AHB30924.1| coat protein, partial [Strawberry latent ringspot...   136   3e-30
gb|ABC58719.1| coat protein [Strawberry latent ringspot virus] g...   135   8e-30
gb|ABC58721.2| coat protein [Strawberry latent ringspot virus]        134   1e-29
ref|YP_227368.1| 109 kDa polyprotein [Strawberry latent ringspot...   134   1e-29
gb|AEF97401.1| coat protein [Strawberry latent ringspot virus]        134   1e-29
gb|AEF97400.1| coat protein [Strawberry latent ringspot virus]        134   1e-29
gb|AAR99477.1| coat protein [Strawberry latent ringspot virus] g...   134   1e-29
gb|AHB30923.1| coat protein, partial [Strawberry latent ringspot...   133   2e-29
gb|ADN88406.1| polyprotein, partial [Strawberry latent ringspot ...   132   4e-29
gb|ADN88404.1| polyprotein, partial [Strawberry latent ringspot ...   132   6e-29
gb|ADN88402.1| polyprotein, partial [Strawberry latent ringspot ...   131   8e-29
ref|YP_227375.1| large coat protein [Strawberry latent ringspot ...    85   9e-15
ref|YP_227374.1| putative 40 kDa movement protein [Strawberry la...    57   2e-06

>emb|CAA54615.1| 98.8kD polyprotein [Strawberry latent ringspot virus]
          Length = 890

 Score =  137 bits (345), Expect = 2e-30
 Identities = 66/97 (68%), Positives = 73/97 (75%)
 Frame = -2

Query: 344 QDRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVV 165
           QDRAALPS P  KC FHN+V CPC QHTG  EASG H EELVPAS GGTE  FFSP+ + 
Sbjct: 210 QDRAALPSAPSPKCAFHNRVGCPCKQHTGEAEASGLH-EELVPASSGGTEAIFFSPKSIP 268

Query: 164 HPQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
            P  ++FVGSHPFSFPINSNVGT VYTLP+     +D
Sbjct: 269 LPGSAKFVGSHPFSFPINSNVGTTVYTLPLIRTSLKD 305


>gb|AHB30925.1| coat protein, partial [Strawberry latent ringspot virus]
          Length = 152

 Score =  137 bits (345), Expect = 2e-30
 Identities = 64/96 (66%), Positives = 73/96 (76%)
 Frame = -2

Query: 341 DRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVVH 162
           DRAALPS PP+KC FHN+V CPC QHTG  E SG H EELVPAS GGTE  FFSP+ +  
Sbjct: 50  DRAALPSAPPQKCSFHNRVGCPCTQHTGEAEPSGLH-EELVPASSGGTEAIFFSPKSIPV 108

Query: 161 PQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
           P  ++FVGSHPFSFPINSNVGT VY+LP+     +D
Sbjct: 109 PGSAKFVGSHPFSFPINSNVGTTVYSLPLISTSLKD 144


>gb|ADN88405.1| polyprotein, partial [Strawberry latent ringspot virus]
          Length = 712

 Score =  137 bits (345), Expect = 2e-30
 Identities = 64/96 (66%), Positives = 73/96 (76%)
 Frame = -2

Query: 341 DRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVVH 162
           DRAALPS PP+KC FHN+V CPC QHTG  E SG H EELVPAS GGTE  FFSP+ +  
Sbjct: 57  DRAALPSAPPQKCSFHNRVGCPCTQHTGEAEPSGLH-EELVPASSGGTEAIFFSPKSIPV 115

Query: 161 PQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
           P  ++FVGSHPFSFPINSNVGT VY+LP+     +D
Sbjct: 116 PGSAKFVGSHPFSFPINSNVGTTVYSLPLISTSLKD 151


>gb|ADN88403.1| polyprotein, partial [Strawberry latent ringspot virus]
          Length = 712

 Score =  137 bits (345), Expect = 2e-30
 Identities = 64/96 (66%), Positives = 73/96 (76%)
 Frame = -2

Query: 341 DRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVVH 162
           DRAALPS PP+KC FHN+V CPC QHTG  E SG H EELVPAS GGTE  FFSP+ +  
Sbjct: 57  DRAALPSAPPQKCSFHNRVGCPCTQHTGEAEPSGLH-EELVPASSGGTEAIFFSPKSIPV 115

Query: 161 PQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
           P  ++FVGSHPFSFPINSNVGT VY+LP+     +D
Sbjct: 116 PGSAKFVGSHPFSFPINSNVGTTVYSLPLISTSLKD 151


>gb|AHB30924.1| coat protein, partial [Strawberry latent ringspot virus]
           gi|560369183|gb|AHB30926.1| coat protein, partial
           [Strawberry latent ringspot virus]
          Length = 152

 Score =  136 bits (343), Expect = 3e-30
 Identities = 65/97 (67%), Positives = 73/97 (75%)
 Frame = -2

Query: 344 QDRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVV 165
           QDRAALPS P  KC FHN+V CPC QHTG  EASG H EELVPA+ GGTE  FFSP+ + 
Sbjct: 49  QDRAALPSAPSPKCSFHNRVGCPCKQHTGEAEASGLH-EELVPAASGGTEAIFFSPKSIP 107

Query: 164 HPQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
            P  ++FVGSHPFSFPINSNVGT VYTLP+     +D
Sbjct: 108 LPGSAKFVGSHPFSFPINSNVGTTVYTLPLIRTSLKD 144


>gb|ABC58719.1| coat protein [Strawberry latent ringspot virus]
           gi|84380737|gb|ABC58720.1| coat protein [Strawberry
           latent ringspot virus]
          Length = 165

 Score =  135 bits (339), Expect = 8e-30
 Identities = 63/97 (64%), Positives = 73/97 (75%)
 Frame = -2

Query: 344 QDRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVV 165
           QDRA+LPS P  KC FHN+V CPC QHTG  EASG H EEL+PA+ GGTE  FFSP+ + 
Sbjct: 56  QDRASLPSAPSPKCSFHNRVGCPCKQHTGEAEASGLH-EELIPAASGGTEAIFFSPKSIP 114

Query: 164 HPQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
            P  ++FVGSHPFSFPINSNVGT VYTLP+     +D
Sbjct: 115 LPGSAKFVGSHPFSFPINSNVGTTVYTLPLIRTSLKD 151


>gb|ABC58721.2| coat protein [Strawberry latent ringspot virus]
          Length = 165

 Score =  134 bits (338), Expect = 1e-29
 Identities = 63/96 (65%), Positives = 73/96 (76%)
 Frame = -2

Query: 341 DRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVVH 162
           DRAALPS PP KC FHN+V CPC QHTG  E+SG H EELVPAS GGTE  FFSP+ +  
Sbjct: 57  DRAALPSAPPSKCSFHNRVGCPCKQHTGETESSGLH-EELVPASSGGTEAIFFSPKSIPV 115

Query: 161 PQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
           P  ++FVGS+PFSFPINSNVGT VY+LP+     +D
Sbjct: 116 PGSAKFVGSYPFSFPINSNVGTTVYSLPLISTSLKD 151


>ref|YP_227368.1| 109 kDa polyprotein [Strawberry latent ringspot virus]
           gi|58040999|gb|AAW63129.1| 109 kDa polyprotein
           [Strawberry latent ringspot virus]
          Length = 989

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/97 (65%), Positives = 72/97 (74%)
 Frame = -2

Query: 344 QDRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVV 165
           QDRAALP  P  KC FHN+V CPC QHTG  EASG H EELVPA+ GGTE  FFSP+ + 
Sbjct: 333 QDRAALPFAPSPKCSFHNRVGCPCKQHTGEAEASGLH-EELVPAASGGTEAIFFSPRSIP 391

Query: 164 HPQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
            P  ++FVGSHPFSFPINSNVGT VYTLP+     +D
Sbjct: 392 LPGSAKFVGSHPFSFPINSNVGTTVYTLPLIRTSLKD 428


>gb|AEF97401.1| coat protein [Strawberry latent ringspot virus]
          Length = 146

 Score =  134 bits (337), Expect = 1e-29
 Identities = 62/96 (64%), Positives = 72/96 (75%)
 Frame = -2

Query: 341 DRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVVH 162
           DRAALPS PP KC FHN+V CPC QHTG  E SG H EEL+PA+ GGTE  FFSP+ +  
Sbjct: 41  DRAALPSAPPSKCSFHNRVGCPCKQHTGETEPSGLH-EELIPAASGGTEAIFFSPKSIPV 99

Query: 161 PQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
           P  ++FVGSHPFSFPINSNVGT VY+LP+     +D
Sbjct: 100 PGGAKFVGSHPFSFPINSNVGTTVYSLPLISTSLKD 135


>gb|AEF97400.1| coat protein [Strawberry latent ringspot virus]
          Length = 148

 Score =  134 bits (337), Expect = 1e-29
 Identities = 62/96 (64%), Positives = 72/96 (75%)
 Frame = -2

Query: 341 DRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVVH 162
           DRAALPS PP KC FHN+V CPC QHTG  E SG H EEL+PA+ GGTE  FFSP+ +  
Sbjct: 43  DRAALPSAPPSKCSFHNRVGCPCKQHTGETEPSGLH-EELIPAASGGTEAIFFSPKSIPV 101

Query: 161 PQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
           P  ++FVGSHPFSFPINSNVGT VY+LP+     +D
Sbjct: 102 PGGAKFVGSHPFSFPINSNVGTTVYSLPLISTSLKD 137


>gb|AAR99477.1| coat protein [Strawberry latent ringspot virus]
           gi|41745996|gb|AAS10194.1| coat protein [Strawberry
           latent ringspot virus]
          Length = 165

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/97 (65%), Positives = 72/97 (74%)
 Frame = -2

Query: 344 QDRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVV 165
           QDRAALP  P  KC FHN+V CPC QHTG  EASG H EELVPA+ GGTE  FFSP+ + 
Sbjct: 56  QDRAALPFAPSPKCSFHNRVGCPCKQHTGEAEASGLH-EELVPAASGGTEAIFFSPKSIP 114

Query: 164 HPQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
            P  ++FVGSHPFSFPINSNVGT VYTLP+     +D
Sbjct: 115 LPGSAKFVGSHPFSFPINSNVGTTVYTLPLIRTSLKD 151


>gb|AHB30923.1| coat protein, partial [Strawberry latent ringspot virus]
          Length = 152

 Score =  133 bits (335), Expect = 2e-29
 Identities = 64/97 (65%), Positives = 72/97 (74%)
 Frame = -2

Query: 344 QDRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVV 165
           QDRAALPS P  KC FHN+V CPC QHTG  EASG H EELVPA+ GGTE  FFSP+ + 
Sbjct: 49  QDRAALPSAPSPKCSFHNRVGCPCKQHTGEAEASGLH-EELVPAASGGTEAIFFSPKSIP 107

Query: 164 HPQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
            P  ++ VGSHPFSFPINSNVGT VYTLP+     +D
Sbjct: 108 LPGSAKSVGSHPFSFPINSNVGTTVYTLPLIRTSLKD 144


>gb|ADN88406.1| polyprotein, partial [Strawberry latent ringspot virus]
          Length = 712

 Score =  132 bits (333), Expect = 4e-29
 Identities = 63/97 (64%), Positives = 72/97 (74%)
 Frame = -2

Query: 344 QDRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVV 165
           QDRAALPS P  KC FHN+V CPC QHTG  E SG H E+LVPA+ GGTE  FFSP+ V 
Sbjct: 56  QDRAALPSAPSPKCSFHNRVGCPCKQHTGEAEPSGLH-EDLVPAASGGTEAIFFSPKSVP 114

Query: 164 HPQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
            P  ++FVGSHPFSFPINSNVGT VY+LP+     +D
Sbjct: 115 VPGSAKFVGSHPFSFPINSNVGTTVYSLPLISTSLKD 151


>gb|ADN88404.1| polyprotein, partial [Strawberry latent ringspot virus]
          Length = 712

 Score =  132 bits (331), Expect = 6e-29
 Identities = 62/97 (63%), Positives = 72/97 (74%)
 Frame = -2

Query: 344 QDRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVV 165
           QDRAALPS P  KC FHN+V CPC QHTG  E SG H E+LVPA+ GGTE  FFSP+ + 
Sbjct: 56  QDRAALPSAPSPKCPFHNRVGCPCKQHTGEAEPSGLH-EDLVPAASGGTEAIFFSPKSIP 114

Query: 164 HPQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
            P  ++FVGSHPFSFPINSNVGT VY+LP+     +D
Sbjct: 115 VPGSAKFVGSHPFSFPINSNVGTTVYSLPLISTSLKD 151


>gb|ADN88402.1| polyprotein, partial [Strawberry latent ringspot virus]
          Length = 712

 Score =  131 bits (330), Expect = 8e-29
 Identities = 62/97 (63%), Positives = 72/97 (74%)
 Frame = -2

Query: 344 QDRAALPSPPPEKCQFHNKVSCPCAQHTGNMEASGNHHEELVPASEGGTEGQFFSPQPVV 165
           QDRAALPS P  KC FHN+V CPC QHTG  E SG H E+LVPA+ GGTE  FFSP+ + 
Sbjct: 56  QDRAALPSAPSPKCPFHNRVGCPCKQHTGEAEPSGLH-EDLVPAASGGTEAIFFSPKSIP 114

Query: 164 HPQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
            P  ++FVGSHPFSFPINSNVGT VY+LP+     +D
Sbjct: 115 VPGGAKFVGSHPFSFPINSNVGTTVYSLPLISTSLKD 151


>ref|YP_227375.1| large coat protein [Strawberry latent ringspot virus]
          Length = 388

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 39/60 (65%), Positives = 46/60 (76%)
 Frame = -2

Query: 233 HEELVPASEGGTEGQFFSPQPVVHPQDSRFVGSHPFSFPINSNVGTVVYTLPIFFFQAED 54
           HEELVPA+ GGTE  FFSP+ +  P  ++FVGSHPFSFPINSNVGT VYTLP+     +D
Sbjct: 3   HEELVPAASGGTEAIFFSPRSIPLPGSAKFVGSHPFSFPINSNVGTTVYTLPLIRTSLKD 62


>ref|YP_227374.1| putative 40 kDa movement protein [Strawberry latent ringspot virus]
          Length = 366

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/34 (70%), Positives = 25/34 (73%)
 Frame = -2

Query: 344 QDRAALPSPPPEKCQFHNKVSCPCAQHTGNMEAS 243
           QDRAALP  P  KC FHN+V CPC QHTG  EAS
Sbjct: 333 QDRAALPFAPSPKCSFHNRVGCPCKQHTGEAEAS 366