BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00047837
         (489 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     107   6e-47
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   113   2e-46
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   107   1e-43
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           107   1e-43
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   107   1e-43
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   107   1e-43
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     108   1e-43
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                108   2e-43
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               108   2e-43
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   109   2e-43
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     109   2e-43
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   105   3e-43
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic...   105   3e-43
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]         109   3e-43
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   107   3e-43
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   109   3e-43
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   109   6e-43
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   103   2e-42
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     107   2e-42
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]         106   2e-42

>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  107 bits (266), Expect(2) = 6e-47
 Identities = 50/88 (56%), Positives = 61/88 (69%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YMSQP+G+V  GKE  VC+LKKSLYGLKQ+ RQWYK FDT+M++ GY R +YD CV+   
Sbjct: 909  YMSQPEGFVETGKENLVCRLKKSLYGLKQSPRQWYKPFDTYMLKIGYTRCQYDCCVYYHV 968

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
               G       YVDDMLIA + M +I K
Sbjct: 969  FEDGKVILLLLYVDDMLIACRDMLQIQK 996



 Score =  106 bits (265), Expect(2) = 6e-47
 Identities = 52/68 (76%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
 Frame = +2

Query: 35   IRYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGD 214
            I YKARLV KGY+  EGVDY+E+FSPVVKHTSIR+LL++AAQ+D+E+EQ+DVKTAFLHGD
Sbjct: 844  ITYKARLVAKGYSQKEGVDYDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGD 903

Query: 215  L-EDIYVS 235
            L EDIY+S
Sbjct: 904  LEEDIYMS 911


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  113 bits (283), Expect(2) = 2e-46
 Identities = 53/88 (60%), Positives = 63/88 (71%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YM+QPDG+ V GKE  VCKLKKSLYGLKQ+ RQWYKRFD++M++ GY RS YD CV+  +
Sbjct: 918  YMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNR 977

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
            LN         YVDDMLIA K   +I K
Sbjct: 978  LNDDSFIYLVLYVDDMLIAAKKKYDIQK 1005



 Score = 98.2 bits (243), Expect(2) = 2e-46
 Identities = 48/69 (69%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
 Frame = +2

Query: 32   GIRYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHG 211
            G++YKAR+V +G+   EGVDYNE+FSPVV+HTSIRVLLA+ A  +LELEQLDVKTAFLHG
Sbjct: 852  GVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHG 911

Query: 212  DL-EDIYVS 235
            +L E+IY++
Sbjct: 912  ELEEEIYMT 920


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  107 bits (268), Expect(2) = 1e-43
 Identities = 52/88 (59%), Positives = 65/88 (73%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YM QP+G++V GKE+ VCKLK+SLYGLKQ+ RQW KRFD+FM+   + RS+YD CV+I+ 
Sbjct: 944  YMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKH 1003

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
            +N G       YVDDMLIA KS  EI K
Sbjct: 1004 VN-GSPIYLLLYVDDMLIAAKSKIEITK 1030



 Score = 94.7 bits (234), Expect(2) = 1e-43
 Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = +2

Query: 38   RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
            +YKARLV +GY+   GVDYN+VFSPVVKH+SIR  L++ A  DLELEQLDVKTAFLHG+L
Sbjct: 880  KYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGEL 939

Query: 218  -EDIYV 232
             EDIY+
Sbjct: 940  EEDIYM 945


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  107 bits (268), Expect(2) = 1e-43
 Identities = 52/88 (59%), Positives = 65/88 (73%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YM QP+G++V GKE+ VCKLK+SLYGLKQ+ RQW KRFD+FM+   + RS+YD CV+I+ 
Sbjct: 946  YMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKH 1005

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
            +N G       YVDDMLIA KS  EI K
Sbjct: 1006 VN-GSPIYLLLYVDDMLIAAKSKIEITK 1032



 Score = 94.7 bits (234), Expect(2) = 1e-43
 Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = +2

Query: 38   RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
            +YKARLV +GY+   GVDYN+VFSPVVKH+SIR  L++ A  DLELEQLDVKTAFLHG+L
Sbjct: 882  KYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGEL 941

Query: 218  -EDIYV 232
             EDIY+
Sbjct: 942  EEDIYM 947


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  107 bits (268), Expect(2) = 1e-43
 Identities = 52/88 (59%), Positives = 65/88 (73%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YM QP+G++V GKE+ VCKLK+SLYGLKQ+ RQW KRFD+FM+   + RS+YD CV+I+ 
Sbjct: 944  YMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKH 1003

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
            +N G       YVDDMLIA KS  EI K
Sbjct: 1004 VN-GSPIYLLLYVDDMLIAAKSKIEITK 1030



 Score = 94.7 bits (234), Expect(2) = 1e-43
 Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = +2

Query: 38   RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
            +YKARLV +GY+   GVDYN+VFSPVVKH+SIR  L++ A  DLELEQLDVKTAFLHG+L
Sbjct: 880  KYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGEL 939

Query: 218  -EDIYV 232
             EDIY+
Sbjct: 940  EEDIYM 945


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  107 bits (268), Expect(2) = 1e-43
 Identities = 52/88 (59%), Positives = 65/88 (73%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YM QP+G++V GKE+ VCKLK+SLYGLKQ+ RQW KRFD+FM+   + RS+YD CV+I+ 
Sbjct: 944  YMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKH 1003

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
            +N G       YVDDMLIA KS  EI K
Sbjct: 1004 VN-GSPIYLLLYVDDMLIAAKSKIEITK 1030



 Score = 94.7 bits (234), Expect(2) = 1e-43
 Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = +2

Query: 38   RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
            +YKARLV +GY+   GVDYN+VFSPVVKH+SIR  L++ A  DLELEQLDVKTAFLHG+L
Sbjct: 880  KYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGEL 939

Query: 218  -EDIYV 232
             EDIY+
Sbjct: 940  EEDIYM 945


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  108 bits (270), Expect(2) = 1e-43
 Identities = 53/88 (60%), Positives = 63/88 (71%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YM QP+G+VV GKE  VC+LKKSLYGLKQ+ RQWYKRFD+FM+ Q + RS YD CV++ K
Sbjct: 852  YMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-K 910

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
            +  G       YVDDMLIA K   EI K
Sbjct: 911  VVDGSAIYLLLYVDDMLIAAKDKSEIAK 938



 Score = 94.0 bits (232), Expect(2) = 1e-43
 Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = +2

Query: 38  RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
           RYKARLV KGY+   G+D+N+VFSPVVKH+SIR LL++ A  D ELEQ+DVKTAFLHG+L
Sbjct: 788 RYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGEL 847

Query: 218 -EDIYV 232
            EDIY+
Sbjct: 848 EEDIYM 853


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  108 bits (270), Expect(2) = 2e-43
 Identities = 53/88 (60%), Positives = 63/88 (71%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YM QP+G+VV GKE  VC+LKKSLYGLKQ+ RQWYKRFD+FM+ Q + RS YD CV++ K
Sbjct: 869  YMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-K 927

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
            +  G       YVDDMLIA K   EI K
Sbjct: 928  VVDGSAIYLLLYVDDMLIAAKDKSEIAK 955



 Score = 93.6 bits (231), Expect(2) = 2e-43
 Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = +2

Query: 38   RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
            RYKARLV KGY+   G+D+N++FSPVVKH+SIR LL++ A  D ELEQ+DVKTAFLHG+L
Sbjct: 805  RYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGEL 864

Query: 218  -EDIYV 232
             EDIY+
Sbjct: 865  EEDIYM 870


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  108 bits (270), Expect(2) = 2e-43
 Identities = 53/88 (60%), Positives = 63/88 (71%)
 Frame = +3

Query: 225 YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
           YM QP+G+VV GKE  VC+LKKSLYGLKQ+ RQWYKRFD+FM+ Q + RS YD CV++ K
Sbjct: 701 YMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-K 759

Query: 405 LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
           +  G       YVDDMLIA K   EI K
Sbjct: 760 VVDGSAIYLLLYVDDMLIAAKDKSEIAK 787



 Score = 93.6 bits (231), Expect(2) = 2e-43
 Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = +2

Query: 38  RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
           RYKARLV KGY+   G+D+N++FSPVVKH+SIR LL++ A  D ELEQ+DVKTAFLHG+L
Sbjct: 637 RYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGEL 696

Query: 218 -EDIYV 232
            EDIY+
Sbjct: 697 EEDIYM 702


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  109 bits (273), Expect(2) = 2e-43
 Identities = 53/88 (60%), Positives = 64/88 (72%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YM QP+G+VV+GKE  VC+LKKSLYGLKQ+ RQWYKRFD+FM+ Q + RS YD CV++ K
Sbjct: 978  YMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-K 1036

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
            +  G       YVDDMLIA K   EI K
Sbjct: 1037 VVDGSAIYLLLYVDDMLIAAKDKSEIAK 1064



 Score = 92.0 bits (227), Expect(2) = 2e-43
 Identities = 44/66 (66%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
 Frame = +2

Query: 38   RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
            RYKARLV KGY+   G+D+N+VFSP++KH+SIR LL + A  D ELEQ+DVKTAFLHG+L
Sbjct: 914  RYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGEL 973

Query: 218  -EDIYV 232
             EDIY+
Sbjct: 974  EEDIYM 979


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  109 bits (273), Expect(2) = 2e-43
 Identities = 53/88 (60%), Positives = 64/88 (72%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YM QP+G+VV+GKE  VC+LKKSLYGLKQ+ RQWYKRFD+FM+ Q + RS YD CV++ K
Sbjct: 978  YMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-K 1036

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
            +  G       YVDDMLIA K   EI K
Sbjct: 1037 VVDGSAIYLLLYVDDMLIAAKDKSEIAK 1064



 Score = 92.0 bits (227), Expect(2) = 2e-43
 Identities = 44/66 (66%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
 Frame = +2

Query: 38   RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
            RYKARLV KGY+   G+D+N+VFSP++KH+SIR LL + A  D ELEQ+DVKTAFLHG+L
Sbjct: 914  RYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGEL 973

Query: 218  -EDIYV 232
             EDIY+
Sbjct: 974  EEDIYM 979


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  105 bits (262), Expect(2) = 3e-43
 Identities = 50/87 (57%), Positives = 63/87 (72%)
 Frame = +3

Query: 228  MSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRKL 407
            MSQP+GY      EKVC LKKSLYGLKQ+ RQW +RFD+FMI  GY RS+Y+PCV+ ++L
Sbjct: 951  MSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFDSFMINSGYQRSKYNPCVYTQQL 1010

Query: 408  NKGXXXXXXXYVDDMLIATKSMGEIDK 488
            N G       YVDDMLIA+++  +I K
Sbjct: 1011 NDGSYIYLLLYVDDMLIASQNKDQIQK 1037



 Score = 95.9 bits (237), Expect(2) = 3e-43
 Identities = 44/62 (70%), Positives = 54/62 (87%)
 Frame = +2

Query: 38   RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
            RYKARLV KG++  EG+DY E+FSPVVKH SIR LL++  QFD+ELEQLDVKTAFLHG+L
Sbjct: 886  RYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLDVKTAFLHGNL 945

Query: 218  ED 223
            ++
Sbjct: 946  DE 947


>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
          Length = 624

 Score =  105 bits (262), Expect(2) = 3e-43
 Identities = 48/88 (54%), Positives = 59/88 (67%)
 Frame = +3

Query: 225 YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
           YM Q DG++  GKE  VC+LKKSLYGLKQA RQWYKRF +FMI Q Y +S+YD C++ + 
Sbjct: 292 YMEQSDGFIAPGKEHLVCRLKKSLYGLKQAPRQWYKRFHSFMIGQNYCKSQYDDCIYFQN 351

Query: 405 LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
              G       YVDDMLIA++    I K
Sbjct: 352 FQNGSFIYLLLYVDDMLIASRDKSLIKK 379



 Score = 95.9 bits (237), Expect(2) = 3e-43
 Identities = 47/62 (75%), Positives = 54/62 (87%)
 Frame = +2

Query: 38  RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
           R KARLV KG+   EG+D+NE+FSPVV+HTSIRVLLA  A FDLELEQLDVKTAFLHG+L
Sbjct: 228 RCKARLVVKGFNQKEGIDFNEIFSPVVRHTSIRVLLAFVALFDLELEQLDVKTAFLHGEL 287

Query: 218 ED 223
           E+
Sbjct: 288 EE 289


>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
          Length = 621

 Score =  109 bits (272), Expect(2) = 3e-43
 Identities = 53/88 (60%), Positives = 63/88 (71%)
 Frame = +3

Query: 225 YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
           YM QP+G+VV GKE  VC+LKKSLYGLKQ+ RQWYKRFD+FM+ Q + RS YD CV++ K
Sbjct: 329 YMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYV-K 387

Query: 405 LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
           +  G       YVDDMLIA K   EI K
Sbjct: 388 VADGSAIYLLLYVDDMLIAAKDKSEIAK 415



 Score = 92.0 bits (227), Expect(2) = 3e-43
 Identities = 45/65 (69%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
 Frame = +2

Query: 41  YKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL- 217
           YKARLV KGY+   G+D+N+VFSPVVKH+SIR LL++ A  D ELEQ+DVKTAFLHG+L 
Sbjct: 266 YKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELE 325

Query: 218 EDIYV 232
           EDIY+
Sbjct: 326 EDIYM 330


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  107 bits (267), Expect(2) = 3e-43
 Identities = 53/88 (60%), Positives = 62/88 (70%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YM QP G+VV GKE  VC+LKKSLYGLKQ+ RQWYKRFD+FM+ Q + RS YD CV++ K
Sbjct: 1150 YMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-K 1208

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
            +  G       YVDDMLIA K   EI K
Sbjct: 1209 VVDGSAIYLLLYVDDMLIAAKDKSEIAK 1236



 Score = 93.6 bits (231), Expect(2) = 3e-43
 Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = +2

Query: 38   RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
            RYKARL+ KGY+   G+D+N+VFSPVVKH+SIR LL++ A  D ELEQ+DVKTAFLHG+L
Sbjct: 1086 RYKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGEL 1145

Query: 218  -EDIYV 232
             EDIY+
Sbjct: 1146 EEDIYM 1151


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 983

 Score =  109 bits (273), Expect(2) = 3e-43
 Identities = 53/88 (60%), Positives = 64/88 (72%)
 Frame = +3

Query: 225 YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
           YM QP+G+VV GKE  VC+LKKSLYGLKQ+ RQWYKRFD+FM+ Q + RS YD CV++ K
Sbjct: 685 YMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVYL-K 743

Query: 405 LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
           +  G       YVDDMLIA K   EI+K
Sbjct: 744 VVDGSAIYLLLYVDDMLIAAKDKSEIEK 771



 Score = 91.3 bits (225), Expect(2) = 3e-43
 Identities = 44/66 (66%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
 Frame = +2

Query: 38  RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
           RYKARLV KGY+    +D+N+VFSP+VKH+SIR LL++ A  D ELEQ+DVKTAFLHG+L
Sbjct: 621 RYKARLVAKGYSQIPSIDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGEL 680

Query: 218 -EDIYV 232
            EDIY+
Sbjct: 681 EEDIYM 686


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score =  109 bits (273), Expect(2) = 6e-43
 Identities = 51/86 (59%), Positives = 66/86 (76%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YM QP+G++V GKE+ VCKLK+SLYGLKQ+ RQWYKRFD+FM+  G+ RSE+D CV+I+ 
Sbjct: 933  YMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKF 992

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEI 482
            +N G       YVDD+LIA KS  +I
Sbjct: 993  VN-GSPIYLLLYVDDILIAAKSKEQI 1017



 Score = 90.5 bits (223), Expect(2) = 6e-43
 Identities = 43/62 (69%), Positives = 52/62 (83%)
 Frame = +2

Query: 38   RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
            R+KARLV KG++   GVDYN+VFSPVVKH+SIR   ++ A  DLELEQLDVKTAFLHG+L
Sbjct: 869  RFKARLVAKGFSQIVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGEL 928

Query: 218  ED 223
            E+
Sbjct: 929  EE 930


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  103 bits (256), Expect(2) = 2e-42
 Identities = 48/88 (54%), Positives = 60/88 (68%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YM QP+G+V   K + VC LKKSLYGLKQ+ RQWYKRFD FM+   + R++YD CV+ + 
Sbjct: 1041 YMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFKT 1100

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
            L  G       YVDDMLIA K+  EI+K
Sbjct: 1101 LPDGSFIYLLLYVDDMLIAAKNRAEINK 1128



 Score = 95.5 bits (236), Expect(2) = 2e-42
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +2

Query: 38   RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
            +YK+RLV KG++  EG+DYNEVFSPVVKH SIRVLLA+ + F+LEL+QLDVKTAFLHG+L
Sbjct: 977  KYKSRLVAKGFSQKEGIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNL 1036

Query: 218  ED 223
            E+
Sbjct: 1037 EE 1038


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  107 bits (266), Expect(2) = 2e-42
 Identities = 52/88 (59%), Positives = 63/88 (71%)
 Frame = +3

Query: 225  YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
            YM QP+G+VV GKE  VC+LKKSLYGLKQ+ RQWYKRFD+FM+ Q +  S YD CV++ K
Sbjct: 915  YMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYL-K 973

Query: 405  LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
            +  G       YVDDMLIA K   EI+K
Sbjct: 974  VVDGSVIYLLLYVDDMLIAAKDKSEIEK 1001



 Score = 91.7 bits (226), Expect(2) = 2e-42
 Identities = 45/66 (68%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
 Frame = +2

Query: 38   RYKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL 217
            RYKARLV KGY+   G+D+N+VFSPVVKH+SIR LL + A  D ELEQ++VKTAFLHG+L
Sbjct: 851  RYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGEL 910

Query: 218  -EDIYV 232
             EDIY+
Sbjct: 911  EEDIYM 916


>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score =  106 bits (265), Expect(2) = 2e-42
 Identities = 52/88 (59%), Positives = 62/88 (70%)
 Frame = +3

Query: 225 YMSQPDGYVVVGKEEKVCKLKKSLYGLKQALRQWYKRFDTFMIEQGYARSEYDPCVFIRK 404
           YM Q +G+VV GKE  VC+LKKSLYGLKQ+ RQWYKRFD+FM+ Q + RS YD CV++ K
Sbjct: 725 YMEQSEGFVVPGKENLVCRLKKSLYGLKQSSRQWYKRFDSFMLSQKFRRSNYDSCVYV-K 783

Query: 405 LNKGXXXXXXXYVDDMLIATKSMGEIDK 488
           +  G       YVDDMLIA K   EI K
Sbjct: 784 VADGSAIYLLLYVDDMLIAAKDKSEIAK 811



 Score = 92.0 bits (227), Expect(2) = 2e-42
 Identities = 45/65 (69%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
 Frame = +2

Query: 41  YKARLVPKGYAL*EGVDYNEVFSPVVKHTSIRVLLALAAQFDLELEQLDVKTAFLHGDL- 217
           YKARLV KGY+   G+D+N+VFSPVVKH+SIR LL++ A  D ELEQ+DVKTAFLHG+L 
Sbjct: 662 YKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELE 721

Query: 218 EDIYV 232
           EDIY+
Sbjct: 722 EDIYM 726