BLASTX nr result
ID: Akebia24_contig00047675
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00047675
(299 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 87 2e-15
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 86 5e-15
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 86 5e-15
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 74 2e-11
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 74 2e-11
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 74 2e-11
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 74 2e-11
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 74 2e-11
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 74 3e-11
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 73 4e-11
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 73 4e-11
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal... 73 4e-11
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 73 5e-11
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 72 6e-11
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 72 6e-11
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 72 8e-11
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 72 8e-11
gb|ABA93547.1| retrotransposon protein, putative, Ty1-copia subc... 72 1e-10
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 72 1e-10
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 72 1e-10
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 87.4 bits (215), Expect = 2e-15
Identities = 48/85 (56%), Positives = 60/85 (70%), Gaps = 6/85 (7%)
Frame = +3
Query: 6 AYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMVALSKAMV 185
AYYHV E KL RAKKA+F+G++ GVKGYRLWC+E K IISRDVTFDES+M+ K +
Sbjct: 645 AYYHVIESKLDPRAKKALFMGFSPGVKGYRLWCLEAKKTIISRDVTFDESAML---KKVN 701
Query: 186 PSYEGVETSKSQV------VDIEPK 242
P EG +++ QV V+ EPK
Sbjct: 702 P--EGADSTPQQVECARKQVEFEPK 724
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 85.9 bits (211), Expect = 5e-15
Identities = 43/59 (72%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Frame = +3
Query: 6 AYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVED--SKFIISRDVTFDESSMVALSK 176
AY HV++GKL RA K IFLGYATGVKGYRLWC ED KFIISRDVTFDES+M K
Sbjct: 765 AYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAMFGQRK 823
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 85.9 bits (211), Expect = 5e-15
Identities = 43/59 (72%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Frame = +3
Query: 6 AYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVED--SKFIISRDVTFDESSMVALSK 176
AY HV++GKL RA K IFLGYATGVKGYRLWC ED KFIISRDVTFDES+M K
Sbjct: 978 AYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAMFGQRK 1036
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 74.3 bits (181), Expect = 2e-11
Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMV---ALS 173
TAY HV+ GKL RA K IFLGY++GVKGY+LWC E K +ISR+V F ES M+ +
Sbjct: 493 TAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPST 552
Query: 174 KAMVPSYE--GVETSKSQVVDIEPK--DQPGSSHVQE 272
V S E V+ K + +PK +P +++E
Sbjct: 553 NVPVESQEKASVQFPKRSIAKDKPKRNTKPPQRYIEE 589
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/99 (39%), Positives = 56/99 (56%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMVALSKAM 182
TAYYHV+EGKL RAKK +F+GY GVKG+R+W + + I+SR+V FDES + L +
Sbjct: 643 TAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPL--LRTIV 700
Query: 183 VPSYEGVETSKSQVVDIEPKDQPGSSHVQEEHHRDTQDE 299
P+ S + V+ + EE ++ Q E
Sbjct: 701 KPTTTSETGSLDKQVEFQVIQNESDLKEPEEEDQEPQTE 739
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 74.3 bits (181), Expect = 2e-11
Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMV---ALS 173
TAY HV+ GKL RA K IFLGY++GVKGY+LWC E K +ISR+V F ES M+ +
Sbjct: 493 TAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPST 552
Query: 174 KAMVPSYE--GVETSKSQVVDIEPK--DQPGSSHVQE 272
V S E V+ K + +PK +P +++E
Sbjct: 553 NVPVESQEKASVQFPKRSIAKDKPKRNTKPPQRYIEE 589
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 73.9 bits (180), Expect = 2e-11
Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMV--ALSK 176
TAY HV+ GKL RA K +FLGY +GVKGY+LW E K +SR V F+ES M +L
Sbjct: 657 TAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMFTNSLPS 716
Query: 177 AMVPSYEGVETSKSQV--VDIEPKDQPGSSHVQEEHHRDTQDE 299
VP E ++ QV VD + Q H Q++H+ D D+
Sbjct: 717 EHVPEKE-LQRMHMQVEHVDDDTGVQVEPVHEQDDHNNDVADD 758
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 73.9 bits (180), Expect = 2e-11
Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMV--ALSK 176
TAY HV+ GKL RA K +FLGY +GVKGY+LW E K +SR V F+ES M +L
Sbjct: 657 TAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMFTNSLPS 716
Query: 177 AMVPSYEGVETSKSQV--VDIEPKDQPGSSHVQEEHHRDTQDE 299
VP E ++ QV VD + Q H Q++H+ D D+
Sbjct: 717 EHVPEKE-LQRMHMQVEHVDDDTGVQVEPVHEQDDHNNDVADD 758
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/74 (51%), Positives = 47/74 (63%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMVALSKAM 182
TAY HV+ GKL RA K IFLGYA+GVKGY+LWC E K +ISR+V F ES ++ +
Sbjct: 637 TAYAHVDNGKLEPRAIKCIFLGYASGVKGYKLWCPETKKVVISRNVVFHESVILHDKPST 696
Query: 183 VPSYEGVETSKSQV 224
E E + QV
Sbjct: 697 NVPVESQEKASVQV 710
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 73.2 bits (178), Expect = 4e-11
Identities = 38/74 (51%), Positives = 46/74 (62%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMVALSKAM 182
TAY HV+ GKL RA K IFLGY +GVKGY+LWC E K +ISR+V F ES M+ +
Sbjct: 872 TAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPST 931
Query: 183 VPSYEGVETSKSQV 224
E E + QV
Sbjct: 932 NVPVESQEKASVQV 945
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 73.2 bits (178), Expect = 4e-11
Identities = 38/74 (51%), Positives = 46/74 (62%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMVALSKAM 182
TAY HV+ GKL RA K IFLGY +GVKGY+LWC E K +ISR+V F ES M+ +
Sbjct: 665 TAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPST 724
Query: 183 VPSYEGVETSKSQV 224
E E + QV
Sbjct: 725 NVPVESQEKASVQV 738
>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
Length = 855
Score = 73.2 bits (178), Expect = 4e-11
Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Frame = +3
Query: 6 AYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMV--ALSKA 179
AY HV++GKL RA K IF+GY +G KGY++W +E+ K +ISR+V F E + K
Sbjct: 354 AYVHVDQGKLKPRAIKGIFIGYPSGTKGYKVWLLEEQKCVISRNVIFQEEVVYKDLNDKE 413
Query: 180 MVPSYEGVETSKSQVVDI----EPKDQPGSSHVQEEHHRDTQDE 299
V E + T + I E DQ G +H++E D DE
Sbjct: 414 TVVKKEDIRTQTDNHLVISKTKEVSDQGGVTHIEECEESDENDE 457
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/54 (62%), Positives = 40/54 (74%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMV 164
TAY HV+ GKL RA K IFLGY +GVKGY+LWC E K +ISR+V F ES M+
Sbjct: 534 TAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCSETKKVVISRNVVFHESVML 587
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 72.4 bits (176), Expect = 6e-11
Identities = 45/103 (43%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMV--ALSK 176
TAY HV+ GKL RA K +FLGY +GVKGY+LW E K +SR V F+ES M +L
Sbjct: 657 TAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMFTNSLPS 716
Query: 177 AMVPSYEGVETSKSQV--VDIEPKDQPGSSHVQEEHHRDTQDE 299
VP E ++ QV VD Q H Q++H+ D D+
Sbjct: 717 EHVPEKE-LQRMHMQVEHVDDYTGVQVEPVHEQDDHNNDVADD 758
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 72.4 bits (176), Expect = 6e-11
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +3
Query: 6 AYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMV 164
AY H+N+GKL ARA K +F+GY GVKGY++WC + K I+SRDV F ES ++
Sbjct: 656 AYLHINQGKLEARALKGVFVGYPDGVKGYKIWCKDQGKCIVSRDVVFHESVLL 708
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/74 (50%), Positives = 46/74 (62%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMVALSKAM 182
TAY HV+ GKL RA K IFLGY +GVKGY+LWC E K +I+R+V F ES M+ +
Sbjct: 486 TAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVINRNVVFHESVMLHDKPST 545
Query: 183 VPSYEGVETSKSQV 224
E E + QV
Sbjct: 546 NVPVESQEKASVQV 559
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 72.0 bits (175), Expect = 8e-11
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 10/109 (9%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMV--ALSK 176
TAY HV+ GKL RA K +FLGY +GVKGY+LW E K +SR V F+ES M +L
Sbjct: 659 TAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMFTNSLPS 718
Query: 177 AMVPSYEGVETSKSQV--------VDIEPKDQPGSSHVQEEHHRDTQDE 299
VP E ++ QV V +EP D+ Q++H+ D D+
Sbjct: 719 EHVPEKE-LQRMHMQVEHVDDDTGVQVEPVDE------QDDHNNDVADD 760
>gb|ABA93547.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 546
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/74 (48%), Positives = 45/74 (60%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMVALSKAM 182
TAY HV+ GKL RA K IFLGY + VKGY+LWC E K +ISR++ F ES M+ +
Sbjct: 274 TAYAHVDNGKLEPRANKCIFLGYPSSVKGYKLWCPETKKVVISRNIVFHESVMLHDKPST 333
Query: 183 VPSYEGVETSKSQV 224
E E + QV
Sbjct: 334 NVPVESQEKASVQV 347
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/73 (50%), Positives = 46/73 (63%)
Frame = +3
Query: 6 AYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMVALSKAMV 185
AY HV+ GKL RA K IFLGY +GVKGY+LWC E K +ISR+V F ES M+ + +
Sbjct: 701 AYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLYDNPSTN 760
Query: 186 PSYEGVETSKSQV 224
E E + QV
Sbjct: 761 VPVESQEKASVQV 773
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/74 (50%), Positives = 46/74 (62%)
Frame = +3
Query: 3 TAYYHVNEGKLAARAKKAIFLGYATGVKGYRLWCVEDSKFIISRDVTFDESSMVALSKAM 182
TAY HV+ GKL RA K IFLGY +GVKGY+LWC E K +ISR+V F ES ++ +
Sbjct: 700 TAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPST 759
Query: 183 VPSYEGVETSKSQV 224
E E + QV
Sbjct: 760 NVPVESQEKASVQV 773