BLASTX nr result
ID: Akebia24_contig00047488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00047488
(266 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004139683.1| PREDICTED: probable U6 snRNA-associated Sm-l... 51 2e-12
gb|EMS64714.1| hypothetical protein TRIUR3_16831 [Triticum urartu] 50 5e-12
tpg|DAA53991.1| TPA: hypothetical protein ZEAMMB73_426325 [Zea m... 50 5e-12
ref|XP_006645725.1| PREDICTED: probable U6 snRNA-associated Sm-l... 50 5e-12
ref|NP_001042629.1| Os01g0256900 [Oryza sativa Japonica Group] g... 50 5e-12
gb|EEC70341.1| hypothetical protein OsI_01238 [Oryza sativa Indi... 50 5e-12
ref|XP_004967816.1| PREDICTED: probable U6 snRNA-associated Sm-l... 50 5e-12
ref|NP_001170512.1| uncharacterized LOC100384520 [Zea mays] gi|2... 50 5e-12
gb|ACN31491.1| unknown [Zea mays] 50 5e-12
ref|NP_001152235.1| U6 snRNA-associated Sm-like protein LSm4 [Ze... 50 5e-12
ref|XP_002457589.1| hypothetical protein SORBIDRAFT_03g009890 [S... 50 5e-12
dbj|BAJ92310.1| predicted protein [Hordeum vulgare subsp. vulgar... 50 5e-12
ref|XP_003566534.1| PREDICTED: probable U6 snRNA-associated Sm-l... 50 5e-12
tpg|DAA53989.1| TPA: hypothetical protein ZEAMMB73_426325, parti... 50 5e-12
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera] 49 1e-11
emb|CBI36838.3| unnamed protein product [Vitis vinifera] 49 1e-11
ref|XP_004495969.1| PREDICTED: probable U6 snRNA-associated Sm-l... 49 1e-11
ref|XP_001759241.1| predicted protein [Physcomitrella patens] gi... 49 1e-11
ref|XP_006588394.1| PREDICTED: uncharacterized protein LOC100500... 49 1e-11
gb|EXB36416.1| hypothetical protein L484_001116 [Morus notabilis] 49 1e-11
>ref|XP_004139683.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Cucumis sativus]
Length = 88
Score = 50.8 bits (120), Expect(2) = 2e-12
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV*FKT 30
G +FWRMPECYI GNTIKYL V DEV KT
Sbjct: 50 GDRFWRMPECYIRGNTIKYLRVPDEVFMKT 79
Score = 46.6 bits (109), Expect(2) = 2e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>gb|EMS64714.1| hypothetical protein TRIUR3_16831 [Triticum urartu]
Length = 179
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G KFWRMPECYI GNTIKYL V DEV
Sbjct: 86 GDKFWRMPECYIRGNTIKYLRVPDEV 111
Score = 46.6 bits (109), Expect(2) = 5e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 64 HLVNCDTWMNIHLREVICTSK 84
>tpg|DAA53991.1| TPA: hypothetical protein ZEAMMB73_426325 [Zea mays]
Length = 172
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G KFWRMPECYI GNTIKYL V DEV
Sbjct: 50 GDKFWRMPECYIRGNTIKYLRVPDEV 75
Score = 46.6 bits (109), Expect(2) = 5e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>ref|XP_006645725.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Oryza brachyantha]
Length = 169
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G KFWRMPECYI GNTIKYL V DEV
Sbjct: 72 GDKFWRMPECYIRGNTIKYLRVPDEV 97
Score = 46.6 bits (109), Expect(2) = 5e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 50 HLVNCDTWMNIHLREVICTSK 70
>ref|NP_001042629.1| Os01g0256900 [Oryza sativa Japonica Group]
gi|12230291|sp|Q9LGE6.1|LSM4_ORYSJ RecName:
Full=Probable U6 snRNA-associated Sm-like protein LSm4
gi|9711887|dbj|BAB07978.1| putative glycine-rich protein
2 [Oryza sativa Japonica Group]
gi|108792648|dbj|BAE95809.1| putative glycine-rich
protein 2 [Oryza sativa Japonica Group]
gi|113532160|dbj|BAF04543.1| Os01g0256900 [Oryza sativa
Japonica Group] gi|215704752|dbj|BAG94780.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222618133|gb|EEE54265.1| hypothetical protein
OsJ_01157 [Oryza sativa Japonica Group]
Length = 147
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G KFWRMPECYI GNTIKYL V DEV
Sbjct: 50 GDKFWRMPECYIRGNTIKYLRVPDEV 75
Score = 46.6 bits (109), Expect(2) = 5e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>gb|EEC70341.1| hypothetical protein OsI_01238 [Oryza sativa Indica Group]
Length = 147
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G KFWRMPECYI GNTIKYL V DEV
Sbjct: 50 GDKFWRMPECYIRGNTIKYLRVPDEV 75
Score = 46.6 bits (109), Expect(2) = 5e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>ref|XP_004967816.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Setaria italica]
Length = 146
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G KFWRMPECYI GNTIKYL V DEV
Sbjct: 50 GDKFWRMPECYIRGNTIKYLRVPDEV 75
Score = 46.6 bits (109), Expect(2) = 5e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>ref|NP_001170512.1| uncharacterized LOC100384520 [Zea mays] gi|238005774|gb|ACR33922.1|
unknown [Zea mays] gi|413947013|gb|AFW79662.1| U6
snRNA-associated Sm-like protein LSm4 [Zea mays]
gi|414876859|tpg|DAA53990.1| TPA: U6 snRNA-associated
Sm-like protein LSm4 [Zea mays]
Length = 146
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G KFWRMPECYI GNTIKYL V DEV
Sbjct: 50 GDKFWRMPECYIRGNTIKYLRVPDEV 75
Score = 46.6 bits (109), Expect(2) = 5e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>gb|ACN31491.1| unknown [Zea mays]
Length = 146
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G KFWRMPECYI GNTIKYL V DEV
Sbjct: 50 GDKFWRMPECYIRGNTIKYLRVPDEV 75
Score = 46.6 bits (109), Expect(2) = 5e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>ref|NP_001152235.1| U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
gi|195654155|gb|ACG46545.1| U6 snRNA-associated Sm-like
protein LSm4 [Zea mays]
Length = 146
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G KFWRMPECYI GNTIKYL V DEV
Sbjct: 50 GDKFWRMPECYIRGNTIKYLRVPDEV 75
Score = 46.6 bits (109), Expect(2) = 5e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>ref|XP_002457589.1| hypothetical protein SORBIDRAFT_03g009890 [Sorghum bicolor]
gi|241929564|gb|EES02709.1| hypothetical protein
SORBIDRAFT_03g009890 [Sorghum bicolor]
Length = 145
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G KFWRMPECYI GNTIKYL V DEV
Sbjct: 50 GDKFWRMPECYIRGNTIKYLRVPDEV 75
Score = 46.6 bits (109), Expect(2) = 5e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>dbj|BAJ92310.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521472|dbj|BAK00312.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|475521593|gb|EMT06646.1|
hypothetical protein F775_32761 [Aegilops tauschii]
Length = 143
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G KFWRMPECYI GNTIKYL V DEV
Sbjct: 50 GDKFWRMPECYIRGNTIKYLRVPDEV 75
Score = 46.6 bits (109), Expect(2) = 5e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>ref|XP_003566534.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Brachypodium distachyon] gi|326528247|dbj|BAJ93305.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 142
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G KFWRMPECYI GNTIKYL V DEV
Sbjct: 50 GDKFWRMPECYIRGNTIKYLRVPDEV 75
Score = 46.6 bits (109), Expect(2) = 5e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>tpg|DAA53989.1| TPA: hypothetical protein ZEAMMB73_426325, partial [Zea mays]
Length = 112
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G KFWRMPECYI GNTIKYL V DEV
Sbjct: 50 GDKFWRMPECYIRGNTIKYLRVPDEV 75
Score = 46.6 bits (109), Expect(2) = 5e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
Length = 3804
Score = 48.5 bits (114), Expect(2) = 1e-11
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G +FWRMPECYI GNTIKYL V DEV
Sbjct: 3704 GDRFWRMPECYIRGNTIKYLRVPDEV 3729
Score = 46.6 bits (109), Expect(2) = 1e-11
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 3682 HLVNCDTWMNIHLREVICTSK 3702
>emb|CBI36838.3| unnamed protein product [Vitis vinifera]
Length = 196
Score = 48.5 bits (114), Expect(2) = 1e-11
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G +FWRMPECYI GNTIKYL V DEV
Sbjct: 96 GDRFWRMPECYIRGNTIKYLRVPDEV 121
Score = 46.6 bits (109), Expect(2) = 1e-11
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 74 HLVNCDTWMNIHLREVICTSK 94
>ref|XP_004495969.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
isoform X1 [Cicer arietinum]
Length = 185
Score = 48.5 bits (114), Expect(2) = 1e-11
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G +FWRMPECYI GNTIKYL V DEV
Sbjct: 50 GDRFWRMPECYIRGNTIKYLRVPDEV 75
Score = 46.6 bits (109), Expect(2) = 1e-11
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>ref|XP_001759241.1| predicted protein [Physcomitrella patens]
gi|162689554|gb|EDQ75925.1| predicted protein
[Physcomitrella patens]
Length = 181
Score = 48.5 bits (114), Expect(2) = 1e-11
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G +FWRMPECYI GNTIKYL V DEV
Sbjct: 50 GDRFWRMPECYIRGNTIKYLRVPDEV 75
Score = 46.6 bits (109), Expect(2) = 1e-11
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 28 HLVNCDTWMNIHLREVICTSK 48
>ref|XP_006588394.1| PREDICTED: uncharacterized protein LOC100500134 isoform X1 [Glycine
max]
Length = 173
Score = 48.5 bits (114), Expect(2) = 1e-11
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G +FWRMPECYI GNTIKYL V DEV
Sbjct: 74 GDRFWRMPECYIRGNTIKYLRVPDEV 99
Score = 46.6 bits (109), Expect(2) = 1e-11
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 52 HLVNCDTWMNIHLREVICTSK 72
>gb|EXB36416.1| hypothetical protein L484_001116 [Morus notabilis]
Length = 165
Score = 48.5 bits (114), Expect(2) = 1e-11
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -1
Query: 119 GGKFWRMPECYICGNTIKYL*VSDEV 42
G +FWRMPECYI GNTIKYL V DEV
Sbjct: 65 GDRFWRMPECYIRGNTIKYLRVPDEV 90
Score = 46.6 bits (109), Expect(2) = 1e-11
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3
Query: 264 HLVNCDTWMNVHLREVIYTSK 202
HLVNCDTWMN+HLREVI TSK
Sbjct: 43 HLVNCDTWMNIHLREVICTSK 63