BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00047046
         (401 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              99   5e-19
gb|ABD63162.1| RNase H family protein [Asparagus officinalis]          96   7e-18
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...    93   3e-17
ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626...    91   2e-16
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...    90   3e-16
ref|XP_006484870.1| PREDICTED: uncharacterized protein LOC102608...    89   8e-16
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                 89   8e-16
emb|CAN71052.1| hypothetical protein VITISV_003719 [Vitis vinifera]    89   8e-16
emb|CAN65082.1| hypothetical protein VITISV_012370 [Vitis vinifera]    89   8e-16
gb|ABD63192.1| Reverse transcriptase family protein [Asparagus o...    88   1e-15
gb|ABA93856.1| retrotransposon protein, putative, Ty3-gypsy subc...    88   1e-15
emb|CAN77310.1| hypothetical protein VITISV_017493 [Vitis vinifera]    88   1e-15
gb|ABA98294.1| retrotransposon protein, putative, Ty3-gypsy subc...    87   2e-15
ref|XP_003632844.1| PREDICTED: protein NYNRIN-like [Vitis vinifera]    87   2e-15
emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera]    87   2e-15
ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608...    87   2e-15
gb|AAM08503.1|AC068654_5 Putative retroelement [Oryza sativa Jap...    87   2e-15
emb|CAD39384.2| OSJNBb0016B03.14 [Oryza sativa Japonica Group]         87   2e-15
emb|CAE02458.1| OSJNBa0042D13.11 [Oryza sativa Japonica Group]         87   2e-15
emb|CAD40452.2| OSJNBa0041M21.10 [Oryza sativa Japonica Group] g...    86   4e-15

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 47/95 (49%), Positives = 64/95 (67%)
 Frame = -3

Query: 285  IGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEISPKVICHHLNVEPTVMPVKQKLKR 106
            +GVGAE++     ELI  LKRN   FAWSI+++  I P +  H LNV+PT  PVKQK ++
Sbjct: 772  VGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNVDPTFKPVKQKRRK 831

Query: 105  LAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
            L P     VN+EV K ++AG I EV++P+W+AN V
Sbjct: 832  LGPERARAVNEEVEKLLKAGQIIEVKYPEWLANPV 866


>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
 Frame = -3

Query: 348 EPVEPPCLENI*MVDIREDMQ---IGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEI 178
           E  EPP  + +  V++ ++     I +  +L+S E ++LI  ++   + FAW+ +++  +
Sbjct: 102 EQREPPTEDKVIQVNMGDEHDPKPIFIAEDLSSSEKEDLISLIREYIDVFAWNYEDMPGL 161

Query: 177 SPKVICHHLNVEPTVMPVKQKLKRLAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
            PKV  HHLN++P   PVKQ+ +R  P   E +  EV K I +GF+RE Q PDW+ANIV
Sbjct: 162 DPKVAMHHLNIDPDAKPVKQQQRRFRPEIMESIESEVKKLIDSGFVREEQHPDWVANIV 220


>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
 Frame = -3

Query: 348 EPVEPPCLENI*MVDIREDMQ---IGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEI 178
           E  EPP  + +  +++ ++     I +  +L+S E + LI  ++   + FAW+ +++  +
Sbjct: 606 EQREPPTEDKVIQINMGDESNPKPIFIAEDLSSSEKENLISLIREYIDVFAWNYEDMPGL 665

Query: 177 SPKVICHHLNVEPTVMPVKQKLKRLAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
            PKV  H LN++P V PVKQ+ +R  P   E +  EV K I +GF+RE Q PDW+ANIV
Sbjct: 666 DPKVAMHRLNIDPDVKPVKQQQRRFRPEIMESIESEVKKLIDSGFVREEQHPDWVANIV 724


>ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626228 [Citrus sinensis]
          Length = 1189

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 45/119 (37%), Positives = 70/119 (58%)
 Frame = -3

Query: 357  GENEPVEPPCLENI*MVDIREDMQIGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEI 178
            G  EPVE   LE + +        I +G+ L  E+ +EL+ CL+ + + FAW+ +++  I
Sbjct: 720  GRQEPVED--LETVSLGPENPGKTIRIGSRLEGEQKQELVKCLQAHADVFAWTHEDMPGI 777

Query: 177  SPKVICHHLNVEPTVMPVKQKLKRLAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
             P+V CH L ++     V+QK +       E +N EV K +RAGFIREV +P+WI+N+V
Sbjct: 778  DPEVACHRLAIKKGARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVSYPEWISNVV 836


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 42/95 (44%), Positives = 63/95 (66%)
 Frame = -3

Query: 285  IGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEISPKVICHHLNVEPTVMPVKQKLKR 106
            +G+  +L SE   EL++ L++N   FAWS++++  I   V CH LNV+PT  P+KQK ++
Sbjct: 730  VGIRIDLPSELQNELVNFLRQNAATFAWSVEDMPGIDSAVTCHELNVDPTYKPLKQKRRK 789

Query: 105  LAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
            L P   + VN+EV K + AG I EV++PDW+ N V
Sbjct: 790  LGPDRTKDVNEEVKKLLDAGSIVEVRYPDWLRNPV 824


>ref|XP_006484870.1| PREDICTED: uncharacterized protein LOC102608935, partial [Citrus
           sinensis]
          Length = 301

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/119 (36%), Positives = 70/119 (58%)
 Frame = -3

Query: 357 GENEPVEPPCLENI*MVDIREDMQIGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEI 178
           G  EPVE   LE + +        I +G+ L  ++ +EL+ CL+ + + FAW+ +++  I
Sbjct: 174 GRQEPVED--LETVSLGPENPGKTIRIGSRLKGKQKQELVKCLEAHADVFAWTHEDMPGI 231

Query: 177 SPKVICHHLNVEPTVMPVKQKLKRLAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
            P+V CH L ++     V+QK +       E +N EV K +RAGFIREV +P+WI+N+V
Sbjct: 232 DPEVACHKLAIKKGARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVSYPEWISNVV 290


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
 Frame = -3

Query: 324 ENI*MVDIREDMQ--IGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEISPKVICHHL 151
           E +  + IRED +    VG++L + E +E++  L+ N + FAW+  ++S I P+ ICHHL
Sbjct: 26  EELDKIFIREDKERYFSVGSQLPALEREEVVQFLQDNIDVFAWTTYDVSGIDPEFICHHL 85

Query: 150 NVEPTVMPVKQKLKRLAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
           NV    MP KQ  +  +    E V +EVNK  +AG I+E+ +P+W+AN V
Sbjct: 86  NVSHNAMPRKQPPRHASQEHAEAVKEEVNKLKQAGAIKEIFYPEWLANTV 135


>emb|CAN71052.1| hypothetical protein VITISV_003719 [Vitis vinifera]
          Length = 944

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 36/89 (40%), Positives = 57/89 (64%)
 Frame = -3

Query: 267 LTSEELKELIDCLKRNQNFFAWSIKEISEISPKVICHHLNVEPTVMPVKQKLKRLAPHFR 88
           +T EE + + + L+ N + FAW+  ++  I P +  H LNV P   P++QK++R  P  +
Sbjct: 1   MTQEETQSIQNILRSNHDIFAWTHSDMKGIHPSIASHKLNVFPAARPIRQKIRRFHPDRQ 60

Query: 87  EVVNKEVNKFIRAGFIREVQFPDWIANIV 1
             +  E+NK + AGFIREV +PDW+AN+V
Sbjct: 61  RXIQDEINKLLEAGFIREVSYPDWLANVV 89


>emb|CAN65082.1| hypothetical protein VITISV_012370 [Vitis vinifera]
          Length = 1734

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 41/114 (35%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
 Frame = -3

Query: 333  PCLENI*MVD---IREDMQIGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEISPKVI 163
            P   NI ++D   + +  +I +G+ L+ +E   LID L+   + FAWS +++  + P ++
Sbjct: 782  PISSNIELIDFGALDQPREIRIGSSLSPDERSRLIDLLRSYLDVFAWSYEDMPGLDPTIV 841

Query: 162  CHHLNVEPTVMPVKQKLKRLAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
             HHL + P   PVKQKL+RL P +   V +E+ K +  GF+  V++P+W+AN+V
Sbjct: 842  QHHLPILPHARPVKQKLRRLHPRWSLQVKEEIQKQLSVGFLSVVEYPEWLANVV 895


>gb|ABD63192.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1146

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
 Frame = -3

Query: 369 HLQWGEN-EPVEPPCLENI*MVDIREDMQ---IGVGAELTSEELKELIDCLKRNQNFFAW 202
           ++Q+G+  E  EPP  + I  +++ ++     I +   L S E +ELI  +K   + FAW
Sbjct: 429 NMQYGDRFEQREPPTEDKIVQINMGDEANPKPIFISDSLLSNEKEELIALVKEYIDVFAW 488

Query: 201 SIKEISEISPKVICHHLNVEPTVMPVKQKLKRLAPHFREVVNKEVNKFIRAGFIREVQFP 22
           + +++  + P V  H L+++    PVKQ+ +R  P   E +  EV K I +GFIRE Q P
Sbjct: 489 NYEDMPGLDPNVAMHRLDIKSDAKPVKQQQRRFRPQIMEAIEAEVKKLIESGFIREEQHP 548

Query: 21  DWIANIV 1
           DW+ANI+
Sbjct: 549 DWLANII 555


>gb|ABA93856.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1427

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 36/95 (37%), Positives = 63/95 (66%)
 Frame = -3

Query: 285  IGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEISPKVICHHLNVEPTVMPVKQKLKR 106
            + +G ++  EE++ +++ LK+N + FAWS  E+  +   +I HHL V+P + P KQKL++
Sbjct: 804  VSLGGDMGEEEVESILEVLKKNIDIFAWSPDEVGGVPADLIMHHLAVKPDIKPRKQKLRK 863

Query: 105  LAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
            ++   +E    EV K +RAG I+E+  P+W+AN+V
Sbjct: 864  MSADRQEAAKAEVQKLLRAGVIQEIDHPEWLANLV 898


>emb|CAN77310.1| hypothetical protein VITISV_017493 [Vitis vinifera]
          Length = 1009

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 38/96 (39%), Positives = 62/96 (64%)
 Frame = -3

Query: 288 QIGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEISPKVICHHLNVEPTVMPVKQKLK 109
           ++ +G+ L++ E   LI  L+   + FAWS K++  + P ++ HHL + P   PVKQKL+
Sbjct: 619 ELKIGSSLSTNERDRLIHLLRSYLDVFAWSYKDMPGLDPSIVQHHLPILPHARPVKQKLR 678

Query: 108 RLAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
           RL PH+   V +E+ K +  GFI  V++P+W+AN+V
Sbjct: 679 RLHPHWSLQVKEEIQKQLSVGFISVVEYPEWLANVV 714


>gb|ABA98294.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 978

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 37/95 (38%), Positives = 62/95 (65%)
 Frame = -3

Query: 285 IGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEISPKVICHHLNVEPTVMPVKQKLKR 106
           + +G ++  EE++ +++ LK+N + FAWS  E+  +   +I HHL V+P + P KQKL++
Sbjct: 44  VSLGGDIGEEEVESILEVLKKNIDIFAWSPDEVGGVPADLIMHHLAVKPDIKPRKQKLRK 103

Query: 105 LAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
           ++   +E    EV K +RAG I+E+  PDW+AN V
Sbjct: 104 MSADRQEAAKAEVQKLLRAGVIQEIDHPDWLANPV 138


>ref|XP_003632844.1| PREDICTED: protein NYNRIN-like [Vitis vinifera]
          Length = 1419

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 39/96 (40%), Positives = 63/96 (65%)
 Frame = -3

Query: 288 QIGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEISPKVICHHLNVEPTVMPVKQKLK 109
           ++ +G+ L++EE   LI  LK   + FAWS +++  + P ++ HHL + P V PVKQKL+
Sbjct: 343 ELKIGSPLSTEERDRLIHLLKSYLDVFAWSYEDMPGLDPSIVQHHLPILPHVRPVKQKLR 402

Query: 108 RLAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
           RL P +   V +E+ K +  GFI  V++P+W+AN+V
Sbjct: 403 RLHPRWSLQVKEEIQKQLSVGFISVVEYPEWLANVV 438


>emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera]
          Length = 781

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 38/120 (31%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
 Frame = -3

Query: 354 ENEPVEPPCLENI*MVDIREDMQ--IGVGAELTSEELKELIDCLKRNQNFFAWSIKEISE 181
           E+    PP  + +  + I E+      + + LT EE + + + L++N + FAW+  ++  
Sbjct: 442 ESSHAYPPAADPLQAIQISEEGTHLTNISSLLTPEETRNMQNALRQNHDVFAWAHSDMKG 501

Query: 180 ISPKVICHHLNVEPTVMPVKQKLKRLAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
           I P +  H LNV PT  P++Q+++R     ++++  E++K + AGFI+EV +PDW+ N+V
Sbjct: 502 IHPSITSHRLNVLPTARPIQQRVRRFHLDRQKIIRNEIDKLLEAGFIKEVDYPDWLTNVV 561


>ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608416 [Citrus sinensis]
          Length = 1313

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
 Frame = -3

Query: 357 GENEPVEPPCLENI*MVDIREDMQIGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEI 178
           G  EPVE   LE + +        + VG+EL  E   EL+ CL+ + + FAWS +++  I
Sbjct: 630 GRQEPVEK--LEEVVVSRSDPSRVVKVGSELGREIKTELVKCLQSHADIFAWSHEDMPGI 687

Query: 177 SPKVICHHLNVEPTVMPVKQKLKRLAPHFR-EVVNKEVNKFIRAGFIREVQFPDWIANIV 1
             ++ CH L V+    PV+QK +R   H R E +N EV K ++AGFIRE ++P+WI+N+V
Sbjct: 688 DRRIACHKLAVKKGARPVRQK-RRCFNHKRYETINAEVEKLLKAGFIREAKYPEWISNVV 746


>gb|AAM08503.1|AC068654_5 Putative retroelement [Oryza sativa Japonica Group]
           gi|31429806|gb|AAP51808.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 1047

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 37/95 (38%), Positives = 60/95 (63%)
 Frame = -3

Query: 285 IGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEISPKVICHHLNVEPTVMPVKQKLKR 106
           + +G ++  EE K +++ LKRN + FAW   E+ ++S  +I HHL V+P   P K KL +
Sbjct: 519 VSLGGDMGEEEAKNILEVLKRNIDIFAWGPDEVGDVSKDLIMHHLAVKPDAKPRKHKLHK 578

Query: 105 LAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
           ++   +E    EV K ++AGFI+E+  P+W+AN V
Sbjct: 579 MSADRQEAAKAEVQKLLKAGFIQEINHPEWLANPV 613


>emb|CAD39384.2| OSJNBb0016B03.14 [Oryza sativa Japonica Group]
          Length = 1323

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 37/95 (38%), Positives = 62/95 (65%)
 Frame = -3

Query: 285 IGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEISPKVICHHLNVEPTVMPVKQKLKR 106
           + +G ++  EE + +++ LK+N + FAWS  E+  +S  +I HHL V+P   P KQKL++
Sbjct: 388 VSLGGDMGEEEAESILEVLKKNIDIFAWSPDEVGGVSTDLIMHHLVVKPNTKPKKQKLRK 447

Query: 105 LAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
           ++   +E    EV K +RAG I+E+  P+W+AN+V
Sbjct: 448 MSADRQEAAKAEVQKQLRAGVIQEIDHPEWLANLV 482


>emb|CAE02458.1| OSJNBa0042D13.11 [Oryza sativa Japonica Group]
          Length = 992

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
 Frame = -3

Query: 363 QWGENEPVEPPC--LENI*MVDIREDMQIGVGAELTSEELKELIDCLKRNQNFFAWSIKE 190
           +W ++ P   P   +  + + D      + +G ++  EE++ +++ LKRN N FAWS  E
Sbjct: 305 EWPKHTPKPTPHGKITKVQIDDADPTKLVSLGGDMGEEEVESILEVLKRNINIFAWSPDE 364

Query: 189 ISEISPKVICHHLNVEPTVMPVKQKLKRLAPHFREVVNKEVNKFIRAGFIREVQFPDWIA 10
           +  +   +I HHL V+P V P KQKL ++    +E    EV K +RAG I+E+  P+W+A
Sbjct: 365 VGGVPADLIMHHLAVKPDVKPRKQKLCKMFADRQEAAKAEVQKLLRAGVIQEIDHPEWLA 424

Query: 9   NIV 1
           N V
Sbjct: 425 NPV 427


>emb|CAD40452.2| OSJNBa0041M21.10 [Oryza sativa Japonica Group]
            gi|38343994|emb|CAD40359.2| OSJNBa0093P23.5 [Oryza sativa
            Japonica Group]
          Length = 2074

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 36/95 (37%), Positives = 62/95 (65%)
 Frame = -3

Query: 285  IGVGAELTSEELKELIDCLKRNQNFFAWSIKEISEISPKVICHHLNVEPTVMPVKQKLKR 106
            + +G ++  EE++ +++ LK+N + FAWS  E+  +   +I HHL V+P + P KQKL++
Sbjct: 1648 VSLGGDMGEEEVESILEVLKKNIDIFAWSPDEVGGVPADLIMHHLAVKPNIKPRKQKLRK 1707

Query: 105  LAPHFREVVNKEVNKFIRAGFIREVQFPDWIANIV 1
            ++   +E    EV K +RAG I+E+  P+W+AN V
Sbjct: 1708 MSADRQEATKTEVQKLLRAGVIQEIDHPEWLANPV 1742