BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00046992
         (288 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007019372.1| Pentatricopeptide repeat superfamily protein...   100   3e-19
gb|EXC27881.1| hypothetical protein L484_009204 [Morus notabilis]     100   4e-19
ref|XP_007014360.1| Pentatricopeptide repeat superfamily protein...    98   1e-18
ref|XP_007014358.1| Pentatricopeptide repeat superfamily protein...    98   1e-18
ref|XP_007014357.1| Pentatricopeptide repeat superfamily protein...    98   1e-18
ref|XP_006489286.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_006419800.1| hypothetical protein CICLE_v10007182mg [Citr...    97   2e-18
ref|XP_006827330.1| hypothetical protein AMTR_s00010p00267800 [A...    97   2e-18
ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containi...    96   4e-18
ref|XP_006377358.1| pentatricopeptide repeat-containing family p...    96   4e-18
emb|CBI19956.3| unnamed protein product [Vitis vinifera]               96   4e-18
ref|XP_006853510.1| hypothetical protein AMTR_s00032p00219990 [A...    96   5e-18
ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containi...    96   7e-18
ref|XP_006655184.1| PREDICTED: pentatricopeptide repeat-containi...    95   9e-18
ref|XP_007139542.1| hypothetical protein PHAVU_008G038800g [Phas...    95   1e-17
ref|XP_004229452.1| PREDICTED: pentatricopeptide repeat-containi...    95   1e-17
ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containi...    95   1e-17
emb|CBI36234.3| unnamed protein product [Vitis vinifera]               95   1e-17
gb|ABR16216.1| unknown [Picea sitchensis]                              95   1e-17
ref|XP_002316102.2| pentatricopeptide repeat-containing family p...    94   1e-17

>ref|XP_007019372.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508724700|gb|EOY16597.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 578

 Score =  100 bits (248), Expect = 3e-19
 Identities = 44/96 (45%), Positives = 71/96 (73%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R++F+++   ++V W ++ISGYAQNG  +KALE+F +MQ  G +P+ +T+ S++SAC+QL
Sbjct: 253 RNIFDRIPVRNLVNWNSLISGYAQNGFCEKALEMFRKMQSEGFEPDEVTITSILSACAQL 312

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           G+ + G++ H  + E G+V+N  VL +LLDMY K G
Sbjct: 313 GELDVGKEIHYLIKEKGIVVNQFVLNALLDMYAKCG 348


>gb|EXC27881.1| hypothetical protein L484_009204 [Morus notabilis]
          Length = 619

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 47/96 (48%), Positives = 64/96 (66%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+ +   D+V W AMISGYAQNG  D+A+ LF  M+E G+ PN IT+  V+SAC+Q+
Sbjct: 229 RRVFDSMTKKDLVTWNAMISGYAQNGLSDEAIRLFGDMKEAGINPNKITLVGVLSACAQV 288

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           G  + G+    F +ESG+  +  V T+LLDMY K G
Sbjct: 289 GALDMGKWVDNFALESGLQHDVYVATALLDMYAKCG 324



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/96 (37%), Positives = 61/96 (63%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+++    +  W +MISGY++ G   +A+ELF +M++ G+ P  +T+ SV+ AC  L
Sbjct: 128 REVFDEITLRGLSSWNSMISGYSKMGYAREAVELFGEMRDDGIAPVEMTLVSVLGACGDL 187

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           GD   GR   EF++E  + +N+ + ++L+ MY K G
Sbjct: 188 GDLSLGRWVEEFVVEKSLEVNSYLGSALIGMYGKCG 223


>ref|XP_007014360.1| Pentatricopeptide repeat superfamily protein isoform 4 [Theobroma
           cacao] gi|590581496|ref|XP_007014363.1|
           Pentatricopeptide repeat superfamily protein isoform 4
           [Theobroma cacao] gi|508784723|gb|EOY31979.1|
           Pentatricopeptide repeat superfamily protein isoform 4
           [Theobroma cacao] gi|508784726|gb|EOY31982.1|
           Pentatricopeptide repeat superfamily protein isoform 4
           [Theobroma cacao]
          Length = 619

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 45/96 (46%), Positives = 66/96 (68%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+ +EG DVV W AMI+GYAQNG  D+A++LFH M++ GV P+ IT+  V+SAC+ +
Sbjct: 283 RGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSACASI 342

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           G  + G++   +  + G+  N  V T+L+DMY K G
Sbjct: 343 GALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCG 378



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/96 (39%), Positives = 61/96 (63%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+++   D+V W +MISGY++ G  ++A+ LF +M+E G  P+ +T+ SV+ AC  L
Sbjct: 182 RRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVSVLGACGDL 241

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           GD   GR    F IE  + +N+ + ++L+ MY K G
Sbjct: 242 GDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCG 277


>ref|XP_007014358.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
           cacao] gi|590581482|ref|XP_007014359.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|590581490|ref|XP_007014361.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|590581493|ref|XP_007014362.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|508784721|gb|EOY31977.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|508784722|gb|EOY31978.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|508784724|gb|EOY31980.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|508784725|gb|EOY31981.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao]
          Length = 565

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 45/96 (46%), Positives = 66/96 (68%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+ +EG DVV W AMI+GYAQNG  D+A++LFH M++ GV P+ IT+  V+SAC+ +
Sbjct: 229 RGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSACASI 288

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           G  + G++   +  + G+  N  V T+L+DMY K G
Sbjct: 289 GALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCG 324



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/96 (39%), Positives = 61/96 (63%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+++   D+V W +MISGY++ G  ++A+ LF +M+E G  P+ +T+ SV+ AC  L
Sbjct: 128 RRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVSVLGACGDL 187

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           GD   GR    F IE  + +N+ + ++L+ MY K G
Sbjct: 188 GDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCG 223


>ref|XP_007014357.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|508784720|gb|EOY31976.1| Pentatricopeptide
           repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 656

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 45/96 (46%), Positives = 66/96 (68%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+ +EG DVV W AMI+GYAQNG  D+A++LFH M++ GV P+ IT+  V+SAC+ +
Sbjct: 320 RGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSACASI 379

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           G  + G++   +  + G+  N  V T+L+DMY K G
Sbjct: 380 GALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCG 415



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/96 (39%), Positives = 61/96 (63%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+++   D+V W +MISGY++ G  ++A+ LF +M+E G  P+ +T+ SV+ AC  L
Sbjct: 219 RRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVSVLGACGDL 278

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           GD   GR    F IE  + +N+ + ++L+ MY K G
Sbjct: 279 GDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCG 314


>ref|XP_006489286.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like [Citrus sinensis]
          Length = 695

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 46/96 (47%), Positives = 64/96 (66%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R +F  ++  DV  W+AMISGYAQN  P+ ALELFH M + GVKPN ITM SV  A + L
Sbjct: 403 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASL 462

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           G  + GR AHE+++ + + +N  +  +++DMY K G
Sbjct: 463 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 498



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/92 (40%), Positives = 54/92 (58%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+K      V +T+MI G+AQN    +ALE+F  M+  GV PN +T+ASV+S+   L
Sbjct: 139 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 198

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMY 13
           G     R  H  +I+  +    I+ T+LL+MY
Sbjct: 199 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 230



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/96 (29%), Positives = 48/96 (50%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R +FE++   DVV W  MI GY Q     +AL ++  M   G+ PN + +  ++SAC + 
Sbjct: 271 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 330

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
             F  G Q H  ++++G      +  +++  Y   G
Sbjct: 331 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 366


>ref|XP_006419800.1| hypothetical protein CICLE_v10007182mg [Citrus clementina]
           gi|557521673|gb|ESR33040.1| hypothetical protein
           CICLE_v10007182mg [Citrus clementina]
          Length = 695

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 46/96 (47%), Positives = 64/96 (66%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R +F  ++  DV  W+AMISGYAQN  P+ ALELFH M + GVKPN ITM SV  A + L
Sbjct: 403 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASL 462

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           G  + GR AHE+++ + + +N  +  +++DMY K G
Sbjct: 463 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 498



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/92 (40%), Positives = 55/92 (59%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+K      V +T+MI G+AQN    +ALE+F  M+ +GV PN +T+ASV+S+   L
Sbjct: 139 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRISGVIPNEVTLASVISSSVHL 198

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMY 13
           G     R  H  +I+  +    I+ T+LL+MY
Sbjct: 199 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 230



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/96 (29%), Positives = 48/96 (50%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R +FE++   DVV W  MI GY Q     +AL ++  M   G+ PN + +  ++SAC + 
Sbjct: 271 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 330

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
             F  G Q H  ++++G      +  +++  Y   G
Sbjct: 331 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 366


>ref|XP_006827330.1| hypothetical protein AMTR_s00010p00267800 [Amborella trichopoda]
           gi|548831759|gb|ERM94567.1| hypothetical protein
           AMTR_s00010p00267800 [Amborella trichopoda]
          Length = 659

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 47/96 (48%), Positives = 64/96 (66%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           + +F ++   DVV WTA+I+GYAQN  P +ALELF QMQ  GVKP+ +T+ SV+SAC+QL
Sbjct: 199 KELFLEMPERDVVSWTALIAGYAQNKQPKEALELFQQMQVAGVKPDEVTLISVISACAQL 258

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           GD E G   H ++ E G      +  +L+DMY K G
Sbjct: 259 GDLELGSSIHSYINEKGFWWMISLCNALIDMYAKCG 294



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/75 (36%), Positives = 46/75 (61%)
 Frame = -1

Query: 282 VFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGD 103
           +F+++   +VV WT MI+G +Q G   +AL LF QMQ   ++ + + M SV+SAC++LG 
Sbjct: 540 LFDEMPERNVVSWTTMIAGCSQTGHSRQALALFRQMQHAHIEADQVVMVSVLSACAELGA 599

Query: 102 FERGRQAHEFMIESG 58
            + G+    ++   G
Sbjct: 600 LDLGKWIDAYISGKG 614


>ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
           [Vitis vinifera]
          Length = 575

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 45/96 (46%), Positives = 67/96 (69%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           RS+F+++   ++V W ++ISGYAQNG  ++ALE F +MQ  G +P+ +T+ASV+SACSQL
Sbjct: 275 RSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQL 334

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           G  + G++ H  M   G+ +N  VL  L+DMY K G
Sbjct: 335 GLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCG 370


>ref|XP_006377358.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550327646|gb|ERP55155.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 585

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 44/96 (45%), Positives = 67/96 (69%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+K+    +V W +MISGY QNG   +A+ LF +M+ETGV+P+  T  SV+SAC+ L
Sbjct: 166 RKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHL 225

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           G F  G   HE+++ +G+ +N ++ TSL++MYI+ G
Sbjct: 226 GAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCG 261



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/68 (48%), Positives = 46/68 (67%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+ ++  +VV WTAMISGY  NG   +A+ELFH+M+  G+ PN IT  +V+SAC+  
Sbjct: 267 REVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHA 326

Query: 108 GDFERGRQ 85
           G    GR+
Sbjct: 327 GLVNEGRR 334


>emb|CBI19956.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 45/96 (46%), Positives = 67/96 (69%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           RS+F+++   ++V W ++ISGYAQNG  ++ALE F +MQ  G +P+ +T+ASV+SACSQL
Sbjct: 146 RSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQL 205

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           G  + G++ H  M   G+ +N  VL  L+DMY K G
Sbjct: 206 GLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCG 241


>ref|XP_006853510.1| hypothetical protein AMTR_s00032p00219990 [Amborella trichopoda]
           gi|548857163|gb|ERN14977.1| hypothetical protein
           AMTR_s00032p00219990 [Amborella trichopoda]
          Length = 662

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 43/94 (45%), Positives = 65/94 (69%)
 Frame = -1

Query: 282 VFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGD 103
           VFE V    + LW A+I+GYAQNG   +AL+LF +M+ +G+KPNP TM SV+ AC++ G+
Sbjct: 402 VFEMVSDWSIALWNAVITGYAQNGFDIEALQLFVRMEPSGLKPNPTTMVSVLPACARSGE 461

Query: 102 FERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           F +G+  H ++++ G   +  V  +LLDMY +GG
Sbjct: 462 FHQGKDMHSYIVKRGWQGDKFVQNALLDMYARGG 495



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VFE+V    +V W  M++ YAQNG  + AL +   M   GVKP+ +T+ASV+ AC+Q 
Sbjct: 300 RMVFERVVNHGLVSWNTMVAAYAQNGRFEDALAMLRSM--AGVKPDGVTLASVLPACAQT 357

Query: 108 GDFERGRQAHEF-MIESGMVMNTIVLTSLLDMYIKGG 1
           G    G + H + M    + +N  V ++L+DMY   G
Sbjct: 358 GALNHGIEIHAYAMRNDDLFLNAYVGSALVDMYCNCG 394



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/78 (33%), Positives = 43/78 (55%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R++F  +   D V W  MI+G+      D+AL L  +M   G + N IT+ +V+ AC+ L
Sbjct: 501 RTIFSGMASKDSVSWNTMITGFVLAELHDEALGLLREMHHMGYRSNSITLMTVLPACAAL 560

Query: 108 GDFERGRQAHEFMIESGM 55
               +GR+ H + I +G+
Sbjct: 561 SALHKGREIHAYAIRNGL 578


>ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 43/96 (44%), Positives = 68/96 (70%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R +F+++   ++V W+ MISGYAQN   DKA+ELF  +Q  GV+ N   M SV+S+C+ L
Sbjct: 205 RKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHL 264

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           G  E G +AH++++++GM +N I+ T+L+DMY + G
Sbjct: 265 GALELGERAHDYVVKNGMTLNLILGTALVDMYARCG 300



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/71 (43%), Positives = 43/71 (60%)
 Frame = -1

Query: 282 VFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGD 103
           VFE +   D + WTA+I+G A +G  +++L+ F  M E G+ P  IT  +V+SACS  G 
Sbjct: 308 VFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGL 367

Query: 102 FERGRQAHEFM 70
            ERG Q  E M
Sbjct: 368 VERGFQIFESM 378



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/94 (29%), Positives = 52/94 (55%)
 Frame = -1

Query: 282 VFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGD 103
           +F +++  ++ ++ AMI G++ +  PD+A   + Q Q  G+ P+ +T   +V +C++L  
Sbjct: 75  IFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHC 134

Query: 102 FERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
              G QAH  +I+ G   +  V  SL+ MY   G
Sbjct: 135 ISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFG 168


>ref|XP_006655184.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Oryza brachyantha]
          Length = 617

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 45/96 (46%), Positives = 63/96 (65%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+ +   DVV W AMI+GYAQNG  ++A+ LFH M++ GV+P+ IT+A V+SACS +
Sbjct: 282 RRVFDSITDKDVVAWNAMITGYAQNGMSNEAIALFHSMRKAGVRPDKITLAGVLSACSAV 341

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           G  E G +   +    G+  N  V T+L+DMY K G
Sbjct: 342 GALELGSELDNYASHRGLYSNVYVGTALVDMYAKCG 377



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETG-VKPNPITMASVVSACSQ 112
           R VF+ +   DVV W AM+  Y + G P +   +F  M + G V PN +T+A V++AC  
Sbjct: 180 RKVFDGIPFRDVVSWNAMMKAYGRVGMPGEVGRMFQAMVKEGAVAPNAVTVAVVLAACRD 239

Query: 111 LGDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
            G+   GR   E+   +GM   ++V ++LL MY K G
Sbjct: 240 EGNLVLGRWMEEWSRSAGMETESLVGSALLGMYEKCG 276


>ref|XP_007139542.1| hypothetical protein PHAVU_008G038800g [Phaseolus vulgaris]
           gi|561012675|gb|ESW11536.1| hypothetical protein
           PHAVU_008G038800g [Phaseolus vulgaris]
          Length = 488

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 46/96 (47%), Positives = 63/96 (65%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+++   DVV WTAM+SGY++   P  ALELF +M+  GV P+ +TM SV+SAC+ L
Sbjct: 197 RRVFDEMPHRDVVTWTAMLSGYSRASRPRDALELFREMRHAGVWPDEVTMVSVISACATL 256

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           GD E GR  H F+ E+G      +  +L+DMY K G
Sbjct: 257 GDVETGRMVHHFVNENGFGWMVALCNALIDMYGKCG 292


>ref|XP_004229452.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like [Solanum lycopersicum]
          Length = 700

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 43/94 (45%), Positives = 67/94 (71%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R++F+++   DV  W++MISGY+Q+  PD ALELFH+M   GVKPN ITM SVVS+ + L
Sbjct: 408 RNLFDQMPARDVFSWSSMISGYSQSEQPDLALELFHEMLAIGVKPNEITMVSVVSSIATL 467

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIK 7
           G  + GR  H+++ ++ + +N  ++ +L+DMY K
Sbjct: 468 GTLKEGRWTHDYICKNSIPLNDNLMAALIDMYAK 501



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/94 (31%), Positives = 52/94 (55%)
 Frame = -1

Query: 282 VFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGD 103
           +F+K+   + V +T MI G+ Q G   + + +F  M+  GV PN +TM +V+SA    G 
Sbjct: 146 LFDKMTERNCVSYTTMIMGWVQKGFWSEGISVFRDMRCFGVGPNEVTMVNVISAYLHCGG 205

Query: 102 FERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
            +  +  H  +++ G++    V T+LL +Y  GG
Sbjct: 206 IKVDKMLHGLVLKVGVMDFVHVSTNLLHLYCLGG 239



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/96 (28%), Positives = 47/96 (48%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           + VFE++   DVV W  +I GY Q    + A++ +  M  TG+ PN + +   +S C Q+
Sbjct: 276 KEVFEQIVDKDVVSWGTIIDGYLQAARLNDAVKRYRDMLYTGLHPNDVMIVDFLSTCGQV 335

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
                GRQ H   ++ G  +   +  +++  Y   G
Sbjct: 336 MSNFEGRQFHGVAVKMGFNLLDFIQATIIHFYAACG 371


>ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 47/92 (51%), Positives = 63/92 (68%)
 Frame = -1

Query: 282 VFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGD 103
           VF K+E  D+V WTAMISGY +NG P+KA+E +  M+  GV P+ IT+ASV+SAC+ LG 
Sbjct: 353 VFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGL 412

Query: 102 FERGRQAHEFMIESGMVMNTIVLTSLLDMYIK 7
            ++G   HEF   +G+    IV  SL+DMY K
Sbjct: 413 LDKGIMLHEFADRTGLTSYVIVANSLIDMYSK 444



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 40/96 (41%), Positives = 57/96 (59%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+++   D + W AMISGY +N    + L LF  M+E  V P+ +TM SV+SAC  L
Sbjct: 250 RLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEAL 309

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           GD   GR+ H ++I++G V    V  SL+ M+   G
Sbjct: 310 GDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVG 345



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/94 (36%), Positives = 53/94 (56%)
 Frame = -1

Query: 282 VFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGD 103
           VF K+   D+  W  ++ GYA+ G  D+AL L+H+M   G++P+  T   V+  C  L D
Sbjct: 151 VFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPD 210

Query: 102 FERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
             RGR+ H  +I  G   +  V+ +L+ MY+K G
Sbjct: 211 LARGREVHLHVIRYGFESDVDVVNALITMYVKCG 244



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/94 (34%), Positives = 56/94 (59%)
 Frame = -1

Query: 282 VFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGD 103
           VF ++   +V+ WT++I G   N    +AL  F QM    +KPN +T+ SV+SAC+++G 
Sbjct: 454 VFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGA 512

Query: 102 FERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
              G++ H   + +G+  +  +  +LLDMY++ G
Sbjct: 513 LSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCG 546



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = -1

Query: 258 DVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGDFERGRQAH 79
           DV  W  +++GYAQ G    A+ELFH+M E+ V P+ IT  S++ ACS+ G    G +  
Sbjct: 561 DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYF 620

Query: 78  EFM 70
           E M
Sbjct: 621 ESM 623


>emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 47/92 (51%), Positives = 63/92 (68%)
 Frame = -1

Query: 282 VFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGD 103
           VF K+E  D+V WTAMISGY +NG P+KA+E +  M+  GV P+ IT+ASV+SAC+ LG 
Sbjct: 353 VFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGL 412

Query: 102 FERGRQAHEFMIESGMVMNTIVLTSLLDMYIK 7
            ++G   HEF   +G+    IV  SL+DMY K
Sbjct: 413 LDKGIMLHEFADRTGLTSYVIVANSLIDMYSK 444



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 40/96 (41%), Positives = 57/96 (59%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+++   D + W AMISGY +N    + L LF  M+E  V P+ +TM SV+SAC  L
Sbjct: 250 RLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEAL 309

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           GD   GR+ H ++I++G V    V  SL+ M+   G
Sbjct: 310 GDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVG 345



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/94 (36%), Positives = 53/94 (56%)
 Frame = -1

Query: 282 VFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGD 103
           VF K+   D+  W  ++ GYA+ G  D+AL L+H+M   G++P+  T   V+  C  L D
Sbjct: 151 VFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPD 210

Query: 102 FERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
             RGR+ H  +I  G   +  V+ +L+ MY+K G
Sbjct: 211 LARGREVHLHVIRYGFESDVDVVNALITMYVKCG 244



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/94 (34%), Positives = 56/94 (59%)
 Frame = -1

Query: 282 VFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGD 103
           VF ++   +V+ WT++I G   N    +AL  F QM    +KPN +T+ SV+SAC+++G 
Sbjct: 454 VFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGA 512

Query: 102 FERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
              G++ H   + +G+  +  +  +LLDMY++ G
Sbjct: 513 LSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCG 546



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = -1

Query: 258 DVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGDFERGRQAH 79
           DV  W  +++GYAQ G    A+ELFH+M E+ V P+ IT  S++ ACS+ G    G +  
Sbjct: 561 DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYF 620

Query: 78  EFM 70
           E M
Sbjct: 621 ESM 623


>gb|ABR16216.1| unknown [Picea sitchensis]
          Length = 394

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 44/96 (45%), Positives = 68/96 (70%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VF+K+   ++V WTAM+SGYAQ G  D+AL +F++MQ   VK N +T+ASV+ AC+QL
Sbjct: 168 RRVFDKMCERNLVSWTAMVSGYAQGGFADEALRMFYEMQGEDVKANYVTVASVLPACAQL 227

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
            D ++G++ H ++I  G+ +  +V  +L+DMY K G
Sbjct: 228 SDLQQGKEIHGYIIRRGLDLGIVVGNALIDMYAKCG 263



 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 37/82 (45%), Positives = 54/82 (65%)
 Frame = -1

Query: 261 VDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQLGDFERGRQA 82
           +DV+ W  +I+ YAQNG  D+ LELF QMQ  GVKPN IT+ASV+SAC+ +   + G++ 
Sbjct: 313 IDVITWNTLITAYAQNGYGDQTLELFQQMQLRGVKPNSITIASVLSACAAVSALQEGKRI 372

Query: 81  HEFMIESGMVMNTIVLTSLLDM 16
           H+ +  S    +  V  +L+DM
Sbjct: 373 HDLVNRSECKSDICVGNALIDM 394



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQE-TGVKPNPITMASVVSACSQ 112
           R  F+ +   DV  W  MI GY ++G   +ALEL+HQMQ+ +   P+  T +SV++AC++
Sbjct: 66  RLAFDNMTKGDVFPWNVMIGGYVKHGETREALELYHQMQKVSSTNPDNYTYSSVLNACAR 125

Query: 111 LGDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           L     G+  ++ +I  G  M+ IV  +L++M++K G
Sbjct: 126 LASLSEGKLIYDEIISKGCEMDVIVENALINMFMKCG 162


>ref|XP_002316102.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550329982|gb|EEF02273.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 665

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 47/94 (50%), Positives = 64/94 (68%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           RSVF+++ G+D+V WTAMI GY QNG P++AL+LF Q ++  V PN +T+ASV S+CSQL
Sbjct: 258 RSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQL 317

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIK 7
            +   GR  H   I+ G   + IV  SL+D Y K
Sbjct: 318 LNLNLGRSIHGLSIKLGS-RDPIVTNSLVDFYAK 350



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           R VFE +   DVV W ++IS ++QNG+  +ALELFHQM+   V P+ +T+ SV+SAC+ L
Sbjct: 358 RYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASL 417

Query: 108 GDFERGRQAHEFMIESGMV-MNTIVLTSLLDMYIKGG 1
              + G   H + ++ G++  N  V T+LL  Y K G
Sbjct: 418 NALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCG 454



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/96 (37%), Positives = 62/96 (64%)
 Frame = -1

Query: 288 RSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQL 109
           RSVF++    +V  W++MI+GY QN      L LF++M+E  ++ N IT+  +V AC +L
Sbjct: 157 RSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKL 216

Query: 108 GDFERGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 1
           G   +G+  H ++I+ G+ + + ++T+LLD+Y K G
Sbjct: 217 GALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCG 252