BLASTX nr result
ID: Akebia24_contig00046934
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00046934
(283 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like ... 79 5e-13
dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidop... 79 5e-13
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 76 4e-12
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 72 6e-11
ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcript... 70 3e-10
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta... 68 1e-09
ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein A... 67 2e-09
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 67 3e-09
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678... 67 3e-09
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 66 6e-09
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 65 1e-08
gb|ABW81026.1| reverse transcriptase [Arabidopsis lyrata subsp. ... 65 1e-08
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 65 1e-08
ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arab... 64 2e-08
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana] 64 2e-08
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 64 3e-08
ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcript... 64 3e-08
ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204... 63 4e-08
ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcript... 63 4e-08
emb|CAB86676.1| putative protein [Arabidopsis thaliana] 63 4e-08
>dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 637
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/84 (42%), Positives = 48/84 (57%)
Frame = +2
Query: 17 DWAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCS 196
+W + VW PK+ F++W+ F L T D L + +A CVFC E RDHLF S
Sbjct: 278 EWYRGVWFPSSTPKYSFVTWLAFHNRLATGDRLYKWNSEARATCVFCDEELETRDHLFFS 337
Query: 197 CPFTKQIWINVLKRSLTTRALSSW 268
CP++ QIWI + K L R +SSW
Sbjct: 338 CPYSSQIWIALAKGLLNGRNVSSW 361
>dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidopsis thaliana]
Length = 278
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/84 (42%), Positives = 48/84 (57%)
Frame = +2
Query: 17 DWAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCS 196
+W + VW PK+ F++W+ F L T D L + +A CVFC E RDHLF S
Sbjct: 110 EWYRGVWFPSSTPKYSFVTWLAFHNRLATGDRLYKWNSEARATCVFCDEELETRDHLFFS 169
Query: 197 CPFTKQIWINVLKRSLTTRALSSW 268
CP++ QIWI + K L R +SSW
Sbjct: 170 CPYSSQIWIALAKGLLNGRNVSSW 193
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 76.3 bits (186), Expect = 4e-12
Identities = 32/88 (36%), Positives = 48/88 (54%)
Frame = +2
Query: 20 WAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCSC 199
W K++W + PK+ F SW+ G L T D ++ C+FC+ E RDHLF +C
Sbjct: 1056 WHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCIFCQGTLETRDHLFFTC 1115
Query: 200 PFTKQIWINVLKRSLTTRALSSWESEIE 283
FT IW+++ + T+ S W+S IE
Sbjct: 1116 SFTSVIWVDLARGIFKTQYTSHWQSIIE 1143
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 72.4 bits (176), Expect = 6e-11
Identities = 30/84 (35%), Positives = 46/84 (54%)
Frame = +2
Query: 17 DWAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCS 196
DW + VW + PK+ F++W+ F L T D + + + CVFC E RDHLF S
Sbjct: 1202 DWYRGVWFSASTPKYSFVTWLAFHNRLTTSDKICKWNSGARYDCVFCGEELETRDHLFFS 1261
Query: 197 CPFTKQIWINVLKRSLTTRALSSW 268
CP++ +W ++ K L R + +W
Sbjct: 1262 CPYSSHVWFSLTKGLLNGRNILNW 1285
>ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana] gi|3184287|gb|AAC18934.1|
putative non-LTR retroelement reverse transcriptase
[Arabidopsis thaliana] gi|330250497|gb|AEC05591.1|
RNA-directed DNA polymerase (reverse
transcriptase)-related family protein [Arabidopsis
thaliana]
Length = 211
Score = 70.1 bits (170), Expect = 3e-10
Identities = 27/74 (36%), Positives = 41/74 (55%)
Frame = +2
Query: 17 DWAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCS 196
DW K +W +PKH FI+W+ L T+D ++ G + C+FC ++E R HLF
Sbjct: 42 DWFKAIWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFIFPPLCLFCNTHDETRQHLFFD 101
Query: 197 CPFTKQIWINVLKR 238
C F +++WI R
Sbjct: 102 CEFAREVWIYFTSR 115
>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1447
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/87 (34%), Positives = 43/87 (49%)
Frame = +2
Query: 8 TNKDWAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHL 187
T W K VW + PK F W+ L T D + ++ CVFC ++RDHL
Sbjct: 1276 TKVTWYKGVWFYQATPKFSFCVWLAALDRLSTGDRMANWKGVSSGSCVFCNHPTKSRDHL 1335
Query: 188 FCSCPFTKQIWINVLKRSLTTRALSSW 268
F +CP++ ++W K LTTR + W
Sbjct: 1336 FFNCPYSSEVWTVTAKNILTTRFTTDW 1362
>ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 288
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/87 (33%), Positives = 44/87 (50%)
Frame = +2
Query: 20 WAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCSC 199
W+ ++W +PKH F +W+ L T+D L R C+ C N E+RDHLF C
Sbjct: 201 WSGLLWGGGNIPKHSFYTWLAIKDRLGTRDRLSRWDSSIPLSCILCGRNYESRDHLFFPC 260
Query: 200 PFTKQIWINVLKRSLTTRALSSWESEI 280
PF +IW +L ++ + W E+
Sbjct: 261 PFGWEIWSRILLFMSSSHRIRYWGVEL 287
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 67.0 bits (162), Expect = 3e-09
Identities = 31/67 (46%), Positives = 38/67 (56%)
Frame = +2
Query: 20 WAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCSC 199
W K VW VPKH FISW+ L T+D L G + A CV C +E RDHLF +C
Sbjct: 582 WHKAVWFTNQVPKHAFISWVTAWNRLHTRDRLRSWGLIVPAECVLCNLVDETRDHLFFAC 641
Query: 200 PFTKQIW 220
F+ +IW
Sbjct: 642 RFSSRIW 648
>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
putative protein [Arabidopsis thaliana]
Length = 473
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/87 (35%), Positives = 42/87 (48%)
Frame = +2
Query: 20 WAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCSC 199
W K VW + +PKH F W+ L T D + A C+ C E+RDHLF SC
Sbjct: 305 WYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILCNKALESRDHLFFSC 364
Query: 200 PFTKQIWINVLKRSLTTRALSSWESEI 280
PF +IW + K T + W++ I
Sbjct: 365 PFATEIWEPLAKTIYNTCFYTDWQTII 391
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/80 (37%), Positives = 41/80 (51%)
Frame = +2
Query: 14 KDWAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFC 193
K W K +W + PK FISW+ L T D + + + CV C + E+RDHLF
Sbjct: 1237 KQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCVLCNISAESRDHLFF 1296
Query: 194 SCPFTKQIWINVLKRSLTTR 253
SC F+ IW + +R L R
Sbjct: 1297 SCNFSSHIWDRLTRRLLLCR 1316
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 65.1 bits (157), Expect = 1e-08
Identities = 29/89 (32%), Positives = 49/89 (55%)
Frame = +2
Query: 14 KDWAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFC 193
K+W +++ N P+ FI W+ G L T+D L + G ++ C FC + EE+ +HLF
Sbjct: 341 KEWKNLLYGNTARPRANFILWLACHGRLSTKDRLCKYGMIDDKSCCFC-SEEESMNHLFF 399
Query: 194 SCPFTKQIWINVLKRSLTTRALSSWESEI 280
C +K++W+ VL+ S W +E+
Sbjct: 400 VCDNSKRVWMEVLQWVQIRHDPSDWPNEL 428
>gb|ABW81026.1| reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
Length = 181
Score = 65.1 bits (157), Expect = 1e-08
Identities = 22/85 (25%), Positives = 46/85 (54%)
Frame = +2
Query: 14 KDWAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFC 193
++W + +W + PK+ F +W+ + T D +++ + A CVFC+ + E +DH+F
Sbjct: 39 RNWYQDIWFSNASPKYAFFTWLVAKNRIATGDRMIKWNQNVDASCVFCKDSRETKDHMFF 98
Query: 194 SCPFTKQIWINVLKRSLTTRALSSW 268
+CP+++ +W ++ L W
Sbjct: 99 NCPYSRTVWKELVSGLLLNNFTEKW 123
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 ETTNKDWAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRD 181
+ T K WA +W VPK+ F W+ L T+ L G + CV C E+RD
Sbjct: 1045 KATVKSWASSIWFKGAVPKYAFNMWVSHLNRLLTRQRLASWGHIQSDACVLCSFASESRD 1104
Query: 182 HLFCSCPFTKQIWINVLKRSL-TTRALSSW 268
HL C F+ Q+W V +R R SSW
Sbjct: 1105 HLLLICEFSAQVWRLVFRRICPRQRLFSSW 1134
>ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arabidopsis lyrata subsp.
lyrata] gi|297311371|gb|EFH41795.1| hypothetical protein
ARALYDRAFT_917542 [Arabidopsis lyrata subsp. lyrata]
Length = 227
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/83 (37%), Positives = 42/83 (50%)
Frame = +2
Query: 20 WAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCSC 199
W VW + VP++ FI W+ L T + G + CVFCR +E+RDHLF +C
Sbjct: 81 WHNSVWFPQRVPRYSFIVWLAVKDQLSTGTRMRAWGV--EQPCVFCRERDESRDHLFFAC 138
Query: 200 PFTKQIWINVLKRSLTTRALSSW 268
PFT IW + R L + W
Sbjct: 139 PFTYSIWSELTSRLLRRKLNPDW 161
>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
Length = 478
Score = 64.3 bits (155), Expect = 2e-08
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +2
Query: 17 DWAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCS 196
+W K VW + PK+ ++WI L T D ++ + CV C E RDHLF +
Sbjct: 311 NWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRDHLFFT 370
Query: 197 CPFTKQIWINVLKRSLTTRALSSWES 274
CP++ ++W + ++ L+ + WE+
Sbjct: 371 CPYSAEVWSTLTRKLLSQHFTNRWEA 396
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 14 KDWAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFC 193
K WAK VW VPKH F W L T+ LV G ++ A C C + E RDHL
Sbjct: 908 KRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLL 967
Query: 194 SCPFTKQIWINV-LKRSLTTRALSSW 268
C F+ Q+W V L+ R L +W
Sbjct: 968 LCDFSSQVWRMVFLRLCPRQRLLCTW 993
>ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcriptase)-related protein
[Arabidopsis thaliana] gi|332195602|gb|AEE33723.1|
RNA-directed DNA polymerase (reverse
transcriptase)-related protein [Arabidopsis thaliana]
Length = 289
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/68 (42%), Positives = 33/68 (48%)
Frame = +2
Query: 17 DWAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCS 196
DWAK VW VPKH F WI L T+ L G + C C E+RDHL S
Sbjct: 126 DWAKAVWFKGAVPKHAFNMWISQLDRLPTRQRLASWGHIQSFDCCLCTIETESRDHLLFS 185
Query: 197 CPFTKQIW 220
C F Q+W
Sbjct: 186 CEFAAQVW 193
>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
Length = 282
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/87 (32%), Positives = 43/87 (49%)
Frame = +2
Query: 20 WAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCSC 199
W+ ++W +PKH F +W+ L T+ L R + C+ C N E+RDHLF SC
Sbjct: 126 WSGLLWGGGNIPKHSFCAWLAIRDRLGTRGRLSRWDRSIPLSCLLCGGNYESRDHLFFSC 185
Query: 200 PFTKQIWINVLKRSLTTRALSSWESEI 280
F +IW +L ++ W E+
Sbjct: 186 HFGWEIWSRILLLKSSSHRTGYWGVEL 212
>ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|332193871|gb|AEE31992.1| RNA-directed DNA polymerase
(reverse transcriptase)-related family protein
[Arabidopsis thaliana]
Length = 320
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/67 (41%), Positives = 36/67 (53%)
Frame = +2
Query: 20 WAKIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCSC 199
W K VW VPKH FI W+ L T+D L G A C+ C +++E+R HLF C
Sbjct: 151 WYKAVWFKNHVPKHAFICWVVAWNRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFFEC 210
Query: 200 PFTKQIW 220
PF +W
Sbjct: 211 PFCGAVW 217
>emb|CAB86676.1| putative protein [Arabidopsis thaliana]
Length = 534
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/83 (37%), Positives = 42/83 (50%)
Frame = +2
Query: 26 KIVWSNKVVPKHRFISWICFSGSLKTQDWLVRRGKLNQACCVFCRANEENRDHLFCSCPF 205
K VW PK+ FI+WI F L T + LV+ C FC E R+H+F SCP+
Sbjct: 106 KGVWFPNSTPKYSFITWIAFRNRLATGEKLVKWNNDANGGCSFCDEAMETREHIFFSCPY 165
Query: 206 TKQIWINVLKRSLTTRALSSWES 274
+ +W + K L +SWES
Sbjct: 166 SSAVWSALTKDLLGQLFTTSWES 188