BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00046657
         (272 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...    99   8e-19
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...    97   2e-18
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...    96   4e-18
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...    96   4e-18
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]            96   4e-18
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...    96   5e-18
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote...    96   5e-18
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc...    95   1e-17
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...    95   1e-17
emb|CAE02229.2| OSJNBb0015C06.7 [Oryza sativa Japonica Group]          95   1e-17
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc...    94   2e-17
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...    94   2e-17
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    94   3e-17
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...    92   8e-17
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    92   1e-16
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    91   2e-16
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]      91   2e-16
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]          91   2e-16
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...    91   2e-16
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...    91   2e-16

>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 43/71 (60%), Positives = 53/71 (74%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           GK+ FCEHCV GK  RVKF+T++ RTK  LDYV+ D+WGPS  A LGG  + +T IDD+S
Sbjct: 456 GKMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHTDLWGPSRKAYLGGARYMLTIIDDYS 515

Query: 35  RYVWVYTMKHK 3
           R VW Y +KHK
Sbjct: 516 RKVWPYFLKHK 526


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1175

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 42/71 (59%), Positives = 52/71 (73%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           G + FCEHCV GK  RVKF+T++ RTK  LDYV+ D+WGPS   SLGG  + +T IDD+S
Sbjct: 351 GNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYS 410

Query: 35  RYVWVYTMKHK 3
           R VW Y +KHK
Sbjct: 411 RKVWPYFLKHK 421


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 41/72 (56%), Positives = 53/72 (73%)
 Frame = -1

Query: 218 SGKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDF 39
           S K+ FCEHC+ GK  RV+F+T++  TK TLDYV+ D+WGPS   SLGG  + +T IDD+
Sbjct: 454 SSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDY 513

Query: 38  SRYVWVYTMKHK 3
           SR VW Y +KHK
Sbjct: 514 SRKVWPYFLKHK 525


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549942|gb|ABA92739.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1373

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 41/72 (56%), Positives = 53/72 (73%)
 Frame = -1

Query: 218 SGKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDF 39
           S K+ FCEHC+ GK  RV+F+T++  TK TLDYV+ D+WGPS   SLGG  + +T IDD+
Sbjct: 454 SSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDY 513

Query: 38  SRYVWVYTMKHK 3
           SR VW Y +KHK
Sbjct: 514 SRKVWPYFLKHK 525


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 41/72 (56%), Positives = 53/72 (73%)
 Frame = -1

Query: 218 SGKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDF 39
           S K+ FCEHC+ GK  RV+F+T++  TK TLDYV+ D+WGPS   SLGG  + +T IDD+
Sbjct: 456 SSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDY 515

Query: 38  SRYVWVYTMKHK 3
           SR VW Y +KHK
Sbjct: 516 SRKVWPYFLKHK 527


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 41/72 (56%), Positives = 53/72 (73%)
 Frame = -1

Query: 218 SGKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDF 39
           S K+ FCEHC+ GK  RV+F+T++  TK TLDYV+ D+WGPS   SLGG  + +T IDD+
Sbjct: 454 SSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTVIDDY 513

Query: 38  SRYVWVYTMKHK 3
           SR VW Y +KHK
Sbjct: 514 SRKVWPYFLKHK 525


>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
           Group] gi|22655747|gb|AAN04164.1| Putative
           retrotransposon protein [Oryza sativa Japonica Group]
           gi|31431214|gb|AAP53029.1| retrotransposon protein,
           putative, Ty1-copia subclass, expressed [Oryza sativa
           Japonica Group]
          Length = 1229

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 42/71 (59%), Positives = 52/71 (73%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           G + FCEHCV GK  RVKF+T++ RTK  LDYV+ D+WGPS   SLGG  + +T IDD+S
Sbjct: 453 GNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGACYMLTIIDDYS 512

Query: 35  RYVWVYTMKHK 3
           R VW Y +KHK
Sbjct: 513 RKVWPYFLKHK 523


>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1131

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 41/71 (57%), Positives = 51/71 (71%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           G + FCEHCV GK  RVKF+T++ RTK  LDYV+ D+WGPS   SLGG  + +T IDD+S
Sbjct: 406 GNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYS 465

Query: 35  RYVWVYTMKHK 3
             VW Y +KHK
Sbjct: 466 TKVWPYFLKHK 476


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53370655|gb|AAU89150.1| integrase core domain
           containing protein [Oryza sativa Japonica Group]
           gi|108710286|gb|ABF98081.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1322

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 41/71 (57%), Positives = 51/71 (71%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           G + FCEHCV GK  RVKF+T++ RTK  LDYV+ D+WGPS   SLGG  + +T IDD+S
Sbjct: 456 GNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYS 515

Query: 35  RYVWVYTMKHK 3
           R  W Y +KHK
Sbjct: 516 RKEWPYFLKHK 526


>emb|CAE02229.2| OSJNBb0015C06.7 [Oryza sativa Japonica Group]
          Length = 977

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 42/71 (59%), Positives = 50/71 (70%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           G + FCEHCV GK  RVKF+T+I RTK  LDYV  D+WGPS   SL G  + +T IDD+S
Sbjct: 277 GNMKFCEHCVFGKHKRVKFNTSIHRTKGILDYVQADLWGPSRKPSLSGARYMLTIIDDYS 336

Query: 35  RYVWVYTMKHK 3
           R VW Y +KHK
Sbjct: 337 RKVWPYFLKHK 347


>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1156

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 41/71 (57%), Positives = 52/71 (73%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           G + FCEHCV GK  RVKF+T++ R+K  LDYV+ D+WGPS   SLGG  + +T IDD+S
Sbjct: 396 GNMKFCEHCVFGKHKRVKFNTSVHRSKGILDYVHADLWGPSRKPSLGGACYMLTIIDDYS 455

Query: 35  RYVWVYTMKHK 3
           R VW Y +KHK
Sbjct: 456 RKVWPYFLKHK 466


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 41/71 (57%), Positives = 51/71 (71%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           G + FCE CV GK  RVKF+T++ RTK  LDYV+ D+WGPS   SLGG  + +T IDD+S
Sbjct: 456 GNMKFCERCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYS 515

Query: 35  RYVWVYTMKHK 3
           R VW Y +KHK
Sbjct: 516 RKVWPYFLKHK 526


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 44/73 (60%), Positives = 50/73 (68%)
 Frame = -1

Query: 221 KSGKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDD 42
           K   L+FCEHCV GK  R KF  AI RTK TLDY++ D WGP    SLGG  +FV+ IDD
Sbjct: 439 KVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWGPCRVESLGGCRFFVSIIDD 498

Query: 41  FSRYVWVYTMKHK 3
           +SR  WVY MKHK
Sbjct: 499 YSRMTWVYMMKHK 511


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 39/71 (54%), Positives = 51/71 (71%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           GKL FCEHC+ GK  RVKF+T+   T+ TLDYV+ D+WGP+   S GG  + +T +DD+S
Sbjct: 381 GKLKFCEHCIFGKHKRVKFNTSTHTTEGTLDYVHSDLWGPARKTSFGGACYMMTIVDDYS 440

Query: 35  RYVWVYTMKHK 3
           R VW Y +KHK
Sbjct: 441 RKVWPYFLKHK 451


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 40/69 (57%), Positives = 52/69 (75%)
 Frame = -1

Query: 209 LDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFSRY 30
           L FCEHCV GK TRVKF+ AI  T+  LDY++ D+WGPS   S+GG  +F+T IDD+SR 
Sbjct: 423 LPFCEHCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGARYFLTLIDDYSRK 482

Query: 29  VWVYTMKHK 3
           VW+Y +K+K
Sbjct: 483 VWIYFLKNK 491


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 38/71 (53%), Positives = 50/71 (70%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           GKL FCEHC+ GK  RVKF+T+   T+  LDYV+ D+WGP+   S GG  + +T +DD+S
Sbjct: 670 GKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYS 729

Query: 35  RYVWVYTMKHK 3
           R VW Y +KHK
Sbjct: 730 RKVWPYFLKHK 740


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 38/71 (53%), Positives = 50/71 (70%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           GKL FCEHC+ GK  RVKF+T+   T+  LDYV+ D+WGP+   S GG  + +T +DD+S
Sbjct: 498 GKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYS 557

Query: 35  RYVWVYTMKHK 3
           R VW Y +KHK
Sbjct: 558 RKVWPYFLKHK 568


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 38/71 (53%), Positives = 50/71 (70%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           GKL FCEHC+ GK  RVKF+T+   T+  LDYV+ D+WGP+   S GG  + +T +DD+S
Sbjct: 295 GKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYS 354

Query: 35  RYVWVYTMKHK 3
           R VW Y +KHK
Sbjct: 355 RKVWPYFLKHK 365


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 38/71 (53%), Positives = 50/71 (70%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           GKL FCEHC+ GK  RVKF+T+   T+  LDYV+ D+WGP+   S GG  + +T +DD+S
Sbjct: 463 GKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYS 522

Query: 35  RYVWVYTMKHK 3
           R VW Y +KHK
Sbjct: 523 RKVWPYFLKHK 533


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 38/71 (53%), Positives = 50/71 (70%)
 Frame = -1

Query: 215 GKLDFCEHCVLGK*TRVKFSTAILRTKATLDYVNIDVWGPSTNASLGGKHWFVTFIDDFS 36
           GKL FCEHC+ GK  RVKF+T+   T+  LDYV+ D+WGP+   S GG  + +T +DD+S
Sbjct: 429 GKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYS 488

Query: 35  RYVWVYTMKHK 3
           R VW Y +KHK
Sbjct: 489 RKVWPYFLKHK 499