BLASTX nr result
ID: Akebia24_contig00045939
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00045939
(325 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfami... 107 2e-21
emb|CBI20254.3| unnamed protein product [Vitis vinifera] 100 2e-19
ref|XP_006493995.1| PREDICTED: pentatricopeptide repeat-containi... 96 5e-18
gb|EXB75130.1| hypothetical protein L484_025905 [Morus notabilis] 87 3e-15
ref|XP_006338375.1| PREDICTED: pentatricopeptide repeat-containi... 86 5e-15
ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arab... 83 5e-14
sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-c... 82 8e-14
ref|XP_002301860.2| pentatricopeptide repeat-containing family p... 82 8e-14
ref|NP_172105.4| transcription factor EMB1444 [Arabidopsis thali... 82 8e-14
ref|XP_006409153.1| hypothetical protein EUTSA_v10022616mg [Eutr... 80 2e-13
ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana] 79 7e-13
ref|XP_003530855.2| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_007134299.1| hypothetical protein PHAVU_010G035600g [Phas... 78 1e-12
ref|XP_004511192.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
ref|XP_007200721.1| hypothetical protein PRUPE_ppa025321mg [Prun... 77 3e-12
ref|XP_006306144.1| hypothetical protein CARUB_v10011638mg [Caps... 76 4e-12
ref|XP_006420414.1| hypothetical protein CICLE_v10006642mg [Citr... 71 1e-10
ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
>ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
cacao] gi|508702602|gb|EOX94498.1| Basic
helix-loop-helix DNA-binding superfamily protein
[Theobroma cacao]
Length = 600
Score = 107 bits (266), Expect = 2e-21
Identities = 47/76 (61%), Positives = 62/76 (81%)
Frame = +3
Query: 93 QPIVSKLQKCSDLKELESIYATMIKSKAHQDCFFINLFIGACSTFRRMDFATLAFTQLEY 272
Q IV +++KCS+L +LE+IYATMIK+ A+QDCF N F+ AC+TF RMD+A LAFTQ++
Sbjct: 49 QTIVDQIKKCSNLNQLETIYATMIKTNANQDCFLTNQFVSACATFCRMDYAILAFTQMQK 108
Query: 273 PNVFVYNAMIRGFTRC 320
PNVFVYNA+I+G C
Sbjct: 109 PNVFVYNALIKGLVHC 124
>emb|CBI20254.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 100 bits (250), Expect = 2e-19
Identities = 44/74 (59%), Positives = 59/74 (79%)
Frame = +3
Query: 99 IVSKLQKCSDLKELESIYATMIKSKAHQDCFFINLFIGACSTFRRMDFATLAFTQLEYPN 278
+ +++KCS +KELES+YA+MIK+ A+QDCF +N FI ACS F R+D+A LAFT ++ PN
Sbjct: 15 LAQQIKKCSMVKELESVYASMIKANANQDCFLMNQFIAACSIFHRIDYAILAFTHMQEPN 74
Query: 279 VFVYNAMIRGFTRC 320
VFVYNAMIR +C
Sbjct: 75 VFVYNAMIRALVQC 88
>ref|XP_006493995.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Citrus sinensis]
Length = 578
Score = 95.9 bits (237), Expect = 5e-18
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = +3
Query: 99 IVSKLQKCSDLKELESIYATMIKSKAHQDCFFINLFIGAC-STFRRMDFATLAFTQLEYP 275
+ ++L+KCS +KELE +YATM+K+ A+QDCF N F+ C S F R D+A LAFTQ++ P
Sbjct: 29 MANQLKKCSSVKELECVYATMVKTNANQDCFLANQFVSFCTSRFHRTDYAILAFTQMQEP 88
Query: 276 NVFVYNAMIRGFTRC 320
NVFVYNA+IRG C
Sbjct: 89 NVFVYNALIRGLVHC 103
>gb|EXB75130.1| hypothetical protein L484_025905 [Morus notabilis]
Length = 554
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/71 (57%), Positives = 52/71 (73%)
Frame = +3
Query: 99 IVSKLQKCSDLKELESIYATMIKSKAHQDCFFINLFIGACSTFRRMDFATLAFTQLEYPN 278
+ +++KCS L ELE +YA+MIK+ A QD N FI A S F R+D+A LAF Q+E PN
Sbjct: 9 VAERIKKCSKLTELEHVYASMIKTGATQDPLLTNQFISASSNFSRVDYAVLAFKQIENPN 68
Query: 279 VFVYNAMIRGF 311
VFVYNAMIRG+
Sbjct: 69 VFVYNAMIRGY 79
>ref|XP_006338375.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like isoform X1 [Solanum tuberosum]
gi|565342486|ref|XP_006338376.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g06145-like isoform X2 [Solanum tuberosum]
Length = 558
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = +3
Query: 99 IVSKLQKCSDLKELESIYATMIKSKAHQDCFFINLFIGACSTFRRMDFATLAFTQLEYPN 278
IV++L+ CS K+LES+Y+ M+K+ A +D F +N FI CS DFA+ AF+Q+E PN
Sbjct: 10 IVNQLKICSSRKQLESLYSLMLKNGATKDSFLMNQFIATCSALNNPDFASFAFSQMENPN 69
Query: 279 VFVYNAMIRGFTRC 320
VFVYNA+IR F C
Sbjct: 70 VFVYNALIRAFVHC 83
>ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata] gi|297338164|gb|EFH68581.1| hypothetical protein
ARALYDRAFT_311694 [Arabidopsis lyrata subsp. lyrata]
Length = 1329
Score = 82.8 bits (203), Expect = 5e-14
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Frame = +3
Query: 27 NIKGLR---HKFSTFNFHYQSTEAHQPIVSKLQK-CSDLKELESIYATMIKSKAHQDCFF 194
N++ LR H S + PI+ ++ K CS K LES A MIK+ Q+C+
Sbjct: 755 NVRSLRVPSHHLRLLRDCSTSLSPYLPILKQIIKQCSTPKLLESALAAMIKTSQTQNCYL 814
Query: 195 INLFIGACSTFRRMDFATLAFTQLEYPNVFVYNAMIRGFTRCS 323
+N FI ACS+F R+D A TQ++ PNVFVYNA+I+GF CS
Sbjct: 815 MNQFITACSSFNRLDLAVSFMTQMQKPNVFVYNALIKGFVTCS 857
>sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 82.0 bits (201), Expect = 8e-14
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +3
Query: 18 NKHNIKGLRHKFSTFNFHYQSTEAHQPIVSKLQK-CSDLKELESIYATMIKSKAHQDCFF 194
N H+++ H F+ S P + K+ K CS K LES A MIK+ +QDC
Sbjct: 6 NVHSLRVPSHHLRDFS---ASLSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRL 62
Query: 195 INLFIGACSTFRRMDFATLAFTQLEYPNVFVYNAMIRGFTRCS 323
+N FI AC++F+R+D A TQ++ PNVFVYNA+ +GF CS
Sbjct: 63 MNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCS 105
>ref|XP_002301860.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550345843|gb|EEE81133.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 933
Score = 82.0 bits (201), Expect = 8e-14
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +3
Query: 147 IYATMIKSKAHQDCFFINLFIGACSTFRRMDFATLAFTQLEYPNVFVYNAMIRGFTR 317
+YA M+K+ +QDC+ +N FI A STF RMD+A LA+TQ+E PNVFVYNAMI+GF +
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQ 57
>ref|NP_172105.4| transcription factor EMB1444 [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity
to an unknown protein T5J8.5 gi|4263522 from Arabidopsis
thaliana BAC T5J8 gb|AC004044 and contains multiple PPR
PF|01535 repeats. ESTs gb|AV565358, gb|AV558710,
gb|AV524184 come from this gene [Arabidopsis thaliana]
gi|332189826|gb|AEE27947.1| bHLH transcription factor
LHL1 [Arabidopsis thaliana]
Length = 1322
Score = 82.0 bits (201), Expect = 8e-14
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +3
Query: 18 NKHNIKGLRHKFSTFNFHYQSTEAHQPIVSKLQK-CSDLKELESIYATMIKSKAHQDCFF 194
N H+++ H F+ S P + K+ K CS K LES A MIK+ +QDC
Sbjct: 751 NVHSLRVPSHHLRDFS---ASLSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRL 807
Query: 195 INLFIGACSTFRRMDFATLAFTQLEYPNVFVYNAMIRGFTRCS 323
+N FI AC++F+R+D A TQ++ PNVFVYNA+ +GF CS
Sbjct: 808 MNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCS 850
>ref|XP_006409153.1| hypothetical protein EUTSA_v10022616mg [Eutrema salsugineum]
gi|557110315|gb|ESQ50606.1| hypothetical protein
EUTSA_v10022616mg [Eutrema salsugineum]
Length = 578
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +3
Query: 78 STEAHQPIVSKLQKCSDLKELESIYATMIKSKAHQDCFFINLFIGACSTFRRMDFATLAF 257
S + PI+ +++CS K LES A MIK+ +QDC +N FI +C++F R+D A +
Sbjct: 26 SLSKNLPILQFIKQCSIPKLLESALAAMIKTSQNQDCHVMNHFITSCTSFNRLDLAVSSM 85
Query: 258 TQLEYPNVFVYNAMIRGFTRCS 323
TQ++ PNVFVYNA+I+G CS
Sbjct: 86 TQMQEPNVFVYNALIKGLVICS 107
>ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/76 (46%), Positives = 51/76 (67%)
Frame = +3
Query: 93 QPIVSKLQKCSDLKELESIYATMIKSKAHQDCFFINLFIGACSTFRRMDFATLAFTQLEY 272
Q ++++++ CS + EL + A+MIK+ A QDCF ++ FI A + + AFTQ+E
Sbjct: 40 QTLLNRIKNCSTINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMEN 99
Query: 273 PNVFVYNAMIRGFTRC 320
PNVFVYNAMI+GF C
Sbjct: 100 PNVFVYNAMIKGFVYC 115
>ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/76 (46%), Positives = 51/76 (67%)
Frame = +3
Query: 93 QPIVSKLQKCSDLKELESIYATMIKSKAHQDCFFINLFIGACSTFRRMDFATLAFTQLEY 272
Q ++++++ CS + EL + A+MIK+ A QDCF ++ FI A + + AFTQ+E
Sbjct: 137 QTLLNRIKNCSTINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMEN 196
Query: 273 PNVFVYNAMIRGFTRC 320
PNVFVYNAMI+GF C
Sbjct: 197 PNVFVYNAMIKGFVYC 212
>dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 79.0 bits (193), Expect = 7e-13
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +3
Query: 18 NKHNIKGLRHKFSTFNFHYQSTEAHQPIVSKLQK-CSDLKELESIYATMIKSKAHQDCFF 194
N H+++ H F+ S P + K+ K CS K LES A MIK+ +QDC
Sbjct: 6 NVHSLRVPSHHLRDFS---ASLSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRL 62
Query: 195 INLFIGACSTFRRMDFATLAFTQLEYPNVFVYNAMIRGFTRCS 323
+N FI AC++F+ +D A TQ++ PNVFVYNA+ +GF CS
Sbjct: 63 MNQFITACTSFKCLDLAVSTMTQMQEPNVFVYNALFKGFVTCS 105
>ref|XP_003530855.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 585
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/87 (41%), Positives = 51/87 (58%)
Frame = +3
Query: 60 FNFHYQSTEAHQPIVSKLQKCSDLKELESIYATMIKSKAHQDCFFINLFIGACSTFRRMD 239
FN + I+ +++C K LES+YA+MIK+ QDCF +N FI ACS ++
Sbjct: 24 FNTAMYTLTLKDTILGHIKRCFSPKSLESVYASMIKTNTTQDCFLVNQFISACSNLSCIN 83
Query: 240 FATLAFTQLEYPNVFVYNAMIRGFTRC 320
A AF ++ PNV V+NA+IRG C
Sbjct: 84 LAASAFANVQNPNVLVFNALIRGCVHC 110
>ref|XP_007134299.1| hypothetical protein PHAVU_010G035600g [Phaseolus vulgaris]
gi|561007344|gb|ESW06293.1| hypothetical protein
PHAVU_010G035600g [Phaseolus vulgaris]
Length = 558
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +3
Query: 93 QPIVSKLQKCSDLKELESIYATMIKSKAHQDCFFINLFIGACSTFRRMDFATLAFTQLEY 272
+ I +++C K LES+YA MIK+ QDCF +N FI +CS +D A+ F +E
Sbjct: 8 ETIRGHIKRCMTQKSLESVYACMIKTNTTQDCFLMNQFISSCSALSYVDLASSTFAHMEN 67
Query: 273 PNVFVYNAMIRGFTRC 320
PN FVYNA+IRG C
Sbjct: 68 PNAFVYNALIRGCGHC 83
>ref|XP_004511192.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cicer arietinum]
Length = 1049
Score = 77.0 bits (188), Expect = 3e-12
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = +3
Query: 69 HYQSTEAHQ---PIVSKLQKCSDLKEL-ESIYATMIKSKAHQDCFFINLFIGACSTFRRM 236
HY + H I+S +++CS K L ESIYATMIK+ +QDCF +N FI A S +
Sbjct: 484 HYNNNNVHSLKDTILSHIKQCSGAKPLLESIYATMIKTNFNQDCFLMNQFITASSISSHI 543
Query: 237 DFATLAFTQLEYPNVFVYNAMIRGFTRC 320
+ AT FTQ++ PN VYNA+I+ C
Sbjct: 544 NLATSTFTQIKKPNTLVYNALIKACVHC 571
>ref|XP_007200721.1| hypothetical protein PRUPE_ppa025321mg [Prunus persica]
gi|462396121|gb|EMJ01920.1| hypothetical protein
PRUPE_ppa025321mg [Prunus persica]
Length = 529
Score = 77.0 bits (188), Expect = 3e-12
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = +3
Query: 159 MIKSKAHQDCFFINLFIGACSTFRRMDFATLAFTQLEYPNVFVYNAMIRGFTRC 320
MIK+ A QD FF+N I ACST R+D+A LAFTQ+E PNVFVYNAMI+GF C
Sbjct: 1 MIKTNATQDSFFMNQLITACSTLSRIDYAVLAFTQIESPNVFVYNAMIKGFVCC 54
>ref|XP_006306144.1| hypothetical protein CARUB_v10011638mg [Capsella rubella]
gi|482574855|gb|EOA39042.1| hypothetical protein
CARUB_v10011638mg [Capsella rubella]
Length = 1308
Score = 76.3 bits (186), Expect = 4e-12
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Frame = +3
Query: 21 KHNIKGLR-HKFSTFNFHYQSTEAHQ--PIVSKLQKCSDLKELESIYATMIKSKAHQDCF 191
K I LR H + ST Q PI+ +++CS K LES A MIK +++
Sbjct: 731 KATINSLRAHSYHLLLLRGCSTSLFQKLPILQLIKQCSSPKLLESALAAMIKMSQNENNR 790
Query: 192 FINLFIGACSTFRRMDFATLAFTQLEYPNVFVYNAMIRGFTRCS 323
+N FI AC++F R+D A + TQ++ PNVFVYNA+I+G CS
Sbjct: 791 LMNQFITACTSFNRVDLAVYSMTQMQEPNVFVYNALIKGLVTCS 834
>ref|XP_006420414.1| hypothetical protein CICLE_v10006642mg [Citrus clementina]
gi|557522287|gb|ESR33654.1| hypothetical protein
CICLE_v10006642mg [Citrus clementina]
Length = 530
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +3
Query: 159 MIKSKAHQDCFFINLFIGAC-STFRRMDFATLAFTQLEYPNVFVYNAMIRGFTRC 320
M+K+ A+QDCF N F+ C S F R D+A LAFTQ++ PNVFVYNA+IRG C
Sbjct: 1 MVKTNANQDCFLANQFVSFCTSRFHRTDYAILAFTQMQEPNVFVYNALIRGLVHC 55
>ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 561
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/74 (41%), Positives = 47/74 (63%)
Frame = +3
Query: 102 VSKLQKCSDLKELESIYATMIKSKAHQDCFFINLFIGACSTFRRMDFATLAFTQLEYPNV 281
+S L KC++L +++ ++A ++KS H D F + I A S R+M AT AF Q++YPNV
Sbjct: 50 LSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNV 109
Query: 282 FVYNAMIRGFTRCS 323
+YN MIR + S
Sbjct: 110 HLYNTMIRAHSHNS 123