BLASTX nr result
ID: Akebia24_contig00045734
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00045734
(541 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 218 7e-55
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 218 7e-55
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put... 209 3e-52
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 209 4e-52
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 201 9e-50
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 201 9e-50
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 194 1e-47
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas... 192 3e-47
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun... 192 6e-47
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 189 4e-46
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 187 1e-45
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 186 3e-45
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 186 3e-45
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 185 5e-45
gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus... 184 1e-44
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 182 3e-44
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 182 4e-44
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218... 179 3e-43
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 179 3e-43
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 172 4e-41
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 218 bits (555), Expect = 7e-55
Identities = 108/161 (67%), Positives = 126/161 (78%), Gaps = 6/161 (3%)
Frame = -3
Query: 473 DWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVL 294
D++ GIFTAT+QR+D FTSEEQ IL DVEPIM SI+RIM Q+ YND DPLS DDQ Y+L
Sbjct: 1722 DYSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYIL 1781
Query: 293 DNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKEK 114
D VF HPDKAVKMGTG+DYVMVS+HSSF +SRCFY+VSTDG +EDFSYRKC+ENF+KEK
Sbjct: 1782 DKVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEK 1841
Query: 113 YPGMAESFNAKYLRKPPHSGGGRRFS------ENREQQM*P 9
YP AE+F KY R+ P +GG R S NREQ + P
Sbjct: 1842 YPDNAETFIGKYFRR-PRAGGNRERSVIPEDGGNREQSVVP 1881
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 218 bits (555), Expect = 7e-55
Identities = 108/161 (67%), Positives = 126/161 (78%), Gaps = 6/161 (3%)
Frame = -3
Query: 473 DWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVL 294
D++ GIFTAT+QR+D FTSEEQ IL DVEPIM SI+RIM Q+ YND DPLS DDQ Y+L
Sbjct: 1662 DYSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYIL 1721
Query: 293 DNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKEK 114
D VF HPDKAVKMGTG+DYVMVS+HSSF +SRCFY+VSTDG +EDFSYRKC+ENF+KEK
Sbjct: 1722 DKVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEK 1781
Query: 113 YPGMAESFNAKYLRKPPHSGGGRRFS------ENREQQM*P 9
YP AE+F KY R+ P +GG R S NREQ + P
Sbjct: 1782 YPDNAETFIGKYFRR-PRAGGNRERSVIPEDGGNREQSVVP 1821
>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|590569189|ref|XP_007011000.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 209 bits (532), Expect = 3e-52
Identities = 96/140 (68%), Positives = 118/140 (84%)
Frame = -3
Query: 473 DWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVL 294
D + + ++TAT+QRLD FTSEEQ IL+DVEP+M SI++IM QS YND DPLS DQ ++L
Sbjct: 1632 DSSMAAMYTATRQRLDMFTSEEQDILSDVEPLMQSIRKIMHQSGYNDGDPLSALDQSFIL 1691
Query: 293 DNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKEK 114
+NVFT+HPDKA+KMG GVDYVMVSKHS+F DSRCFY+VSTDGR++DFSYRKC++NF+K K
Sbjct: 1692 ENVFTHHPDKAIKMGAGVDYVMVSKHSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGK 1751
Query: 113 YPGMAESFNAKYLRKPPHSG 54
YP MA+ F AKY RKP G
Sbjct: 1752 YPDMADVFIAKYFRKPRFGG 1771
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 209 bits (531), Expect = 4e-52
Identities = 100/157 (63%), Positives = 120/157 (76%)
Frame = -3
Query: 539 GDWKLRXXXXXXXXXXKLDHRTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKR 360
GDWK + D N SGIFT T+QRLD FTS+EQ IL+D+EP+MLSI+R
Sbjct: 1751 GDWKNKRNRPSKP-------HEDLNASGIFTTTRQRLDVFTSQEQDILSDIEPLMLSIRR 1803
Query: 359 IMQQSRYNDDDPLSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIV 180
IM Q+ YND DPLS DDQ YVLDNVF YHPDKAVKMG G+D+V VS+HS+FQ+SRCFYIV
Sbjct: 1804 IMHQTGYNDGDPLSADDQSYVLDNVFHYHPDKAVKMGAGIDHVTVSRHSNFQESRCFYIV 1863
Query: 179 STDGRREDFSYRKCMENFVKEKYPGMAESFNAKYLRK 69
STDG ++DFSYRKC+ENF+K KYP +A+ F AKY +
Sbjct: 1864 STDGCKQDFSYRKCLENFIKGKYPDLADEFIAKYFAR 1900
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 201 bits (511), Expect = 9e-50
Identities = 95/158 (60%), Positives = 118/158 (74%)
Frame = -3
Query: 539 GDWKLRXXXXXXXXXXKLDHRTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKR 360
G+WK R D D N ++TA+ QRLD FTSEEQ ILAD+EPIM SI++
Sbjct: 1768 GEWKNRKNRPPKSPGMSND---DANLRALYTASGQRLDMFTSEEQDILADIEPIMQSIRK 1824
Query: 359 IMQQSRYNDDDPLSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIV 180
+M QS YND DPLS +DQ +VL +VF +HPDKA KMG G+D+ MVS+HSSFQ+SRCFY+V
Sbjct: 1825 VMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVV 1884
Query: 179 STDGRREDFSYRKCMENFVKEKYPGMAESFNAKYLRKP 66
+TDG +EDFSYRKC++NF+K KYP +AE F AKY RKP
Sbjct: 1885 TTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRKP 1922
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 201 bits (511), Expect = 9e-50
Identities = 95/158 (60%), Positives = 118/158 (74%)
Frame = -3
Query: 539 GDWKLRXXXXXXXXXXKLDHRTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKR 360
G+WK R D D N ++TA+ QRLD FTSEEQ ILAD+EPIM SI++
Sbjct: 1828 GEWKNRKNRPPKSPGMSND---DANLRALYTASGQRLDMFTSEEQDILADIEPIMQSIRK 1884
Query: 359 IMQQSRYNDDDPLSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIV 180
+M QS YND DPLS +DQ +VL +VF +HPDKA KMG G+D+ MVS+HSSFQ+SRCFY+V
Sbjct: 1885 VMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVV 1944
Query: 179 STDGRREDFSYRKCMENFVKEKYPGMAESFNAKYLRKP 66
+TDG +EDFSYRKC++NF+K KYP +AE F AKY RKP
Sbjct: 1945 TTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRKP 1982
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 194 bits (493), Expect = 1e-47
Identities = 90/168 (53%), Positives = 119/168 (70%)
Frame = -3
Query: 539 GDWKLRXXXXXXXXXXKLDHRTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKR 360
GDWK++ D+ + +FT T+QRLD FTSEEQ L+ +EP M SI+R
Sbjct: 1858 GDWKIKKNHPGKFPRMNNDNTS----VRLFTETRQRLDLFTSEEQDALSLIEPTMKSIRR 1913
Query: 359 IMQQSRYNDDDPLSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIV 180
IM +S YND DP+ P+DQ +++DNVF YHPDKA KMG+G+D++M+S+HSSFQDSRC Y+V
Sbjct: 1914 IMHKSGYNDGDPIRPEDQSFIIDNVFNYHPDKAAKMGSGIDHLMISRHSSFQDSRCLYVV 1973
Query: 179 STDGRREDFSYRKCMENFVKEKYPGMAESFNAKYLRKPPHSGGGRRFS 36
STDGR+EDFSYRKC+ N +K ++P +A+ F KY RKP G R S
Sbjct: 1974 STDGRKEDFSYRKCLGNLIKSRFPDVADEFLDKYFRKPKPGGNQDRIS 2021
>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
gi|561006762|gb|ESW05756.1| hypothetical protein
PHAVU_011G206900g [Phaseolus vulgaris]
Length = 2052
Score = 192 bits (489), Expect = 3e-47
Identities = 89/137 (64%), Positives = 111/137 (81%), Gaps = 1/137 (0%)
Frame = -3
Query: 473 DW-NKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYV 297
DW N++ QRLD ++SEEQ +L ++EPIM SI+RIMQQ YND DPL+ DDQL+V
Sbjct: 1876 DWKNRNRPPRTPGQRLDLYSSEEQDVLKEIEPIMQSIRRIMQQQGYNDGDPLAADDQLFV 1935
Query: 296 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 117
L+NVF +HPDK KMG G+DYVMV+KHSSFQDSRCFY+V DGRREDFSYRKC++N++++
Sbjct: 1936 LENVFEHHPDKDTKMGAGIDYVMVNKHSSFQDSRCFYVVLKDGRREDFSYRKCLDNWIRK 1995
Query: 116 KYPGMAESFNAKYLRKP 66
KYP +AESF KY RKP
Sbjct: 1996 KYPELAESFFGKYFRKP 2012
>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
gi|462415343|gb|EMJ20080.1| hypothetical protein
PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 192 bits (487), Expect = 6e-47
Identities = 82/129 (63%), Positives = 109/129 (84%)
Frame = -3
Query: 455 IFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVLDNVFTY 276
++T T+QRLD FTSEEQ +L+++EP+M S++RIM QS YND DPLS DDQ +VLDNVF Y
Sbjct: 1696 LYTVTRQRLDMFTSEEQDVLSNIEPVMRSLRRIMHQSGYNDGDPLSGDDQSFVLDNVFNY 1755
Query: 275 HPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKEKYPGMAE 96
HPDKA KMG G+D++ V++H SFQDSRCF++VSTDGR EDFSYRKC++N+++EK+P +AE
Sbjct: 1756 HPDKAAKMGCGIDHLTVNRHGSFQDSRCFFVVSTDGRTEDFSYRKCLDNYIREKFPDLAE 1815
Query: 95 SFNAKYLRK 69
+F KY +
Sbjct: 1816 TFIGKYFSR 1824
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 189 bits (480), Expect = 4e-46
Identities = 91/157 (57%), Positives = 114/157 (72%)
Frame = -3
Query: 473 DWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVL 294
D + ++T T+QRLD FTSEEQ IL+DVEPIM SI+RIM QS YND D LS DD+ ++
Sbjct: 1710 DSTVNAMYTVTRQRLDMFTSEEQDILSDVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIF 1769
Query: 293 DNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKEK 114
DNVF YHPDKA+KMG G+D+ V KH SFQDSRC ++VSTDG ++DFSYRKC+E+F++ K
Sbjct: 1770 DNVFNYHPDKAMKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGK 1829
Query: 113 YPGMAESFNAKYLRKPPHSGGGRRFSENREQQM*P*P 3
YP + F KY R+ P SGG NRE + P P
Sbjct: 1830 YPEFVDEFIGKYFRR-PRSGG------NREPSLPPVP 1859
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 187 bits (476), Expect = 1e-45
Identities = 90/157 (57%), Positives = 114/157 (72%)
Frame = -3
Query: 473 DWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVL 294
D + ++T T+QRLD FTSEEQ IL+ VEPIM SI+RIM QS YND D LS DD+ ++
Sbjct: 1708 DSTVNAMYTVTRQRLDMFTSEEQDILSHVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIF 1767
Query: 293 DNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKEK 114
DNVF YHPDKA+KMG G+D+ V KH SFQDSRC ++VSTDG ++DFSYRKC+E+F++ K
Sbjct: 1768 DNVFNYHPDKAMKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGK 1827
Query: 113 YPGMAESFNAKYLRKPPHSGGGRRFSENREQQM*P*P 3
YP + + F KY R+ P SGG NRE + P P
Sbjct: 1828 YPDLVDEFIGKYFRR-PRSGG------NREPSLPPVP 1857
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2082
Score = 186 bits (472), Expect = 3e-45
Identities = 87/141 (61%), Positives = 109/141 (77%), Gaps = 1/141 (0%)
Frame = -3
Query: 473 DW-NKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYV 297
DW N++ A QRLD ++S EQ +L D+EPIM SI+RIMQQ YND DPL+ +DQL+V
Sbjct: 1899 DWKNRNRPPRAPGQRLDIYSSGEQDVLKDIEPIMQSIRRIMQQQGYNDGDPLAAEDQLFV 1958
Query: 296 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 117
L+NVF +HPDK KMGTG+DYVMV+KHSSFQ+SRCFY+V DG +DFSYRKC+ N++ +
Sbjct: 1959 LENVFEHHPDKETKMGTGIDYVMVNKHSSFQESRCFYVVCKDGESKDFSYRKCLANYISK 2018
Query: 116 KYPGMAESFNAKYLRKPPHSG 54
KYP +AESF KY RKP G
Sbjct: 2019 KYPDLAESFLGKYFRKPRARG 2039
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 186 bits (472), Expect = 3e-45
Identities = 81/136 (59%), Positives = 108/136 (79%)
Frame = -3
Query: 473 DWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVL 294
D + + I+TAT+QRLD FTSEEQ +L+ +EP MLSI+RIM QS YND D LS +D ++L
Sbjct: 1836 DSSVAAIYTATRQRLDIFTSEEQDVLSHIEPTMLSIRRIMHQSGYNDGDQLSAEDHSFIL 1895
Query: 293 DNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKEK 114
D VF +HP+K KMG+G+DY V +H SFQ+SRC +++STDGR+EDFSYRKC++N +KEK
Sbjct: 1896 DKVFNFHPEKEAKMGSGIDYFTVDRHGSFQESRCLFVISTDGRKEDFSYRKCLQNMIKEK 1955
Query: 113 YPGMAESFNAKYLRKP 66
YP +AE+FN KY +P
Sbjct: 1956 YPELAEAFNDKYFSRP 1971
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2020
Score = 185 bits (470), Expect = 5e-45
Identities = 86/141 (60%), Positives = 110/141 (78%), Gaps = 1/141 (0%)
Frame = -3
Query: 473 DW-NKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYV 297
DW N++ A QRLD ++SEEQ +L D+EPIM SI+RIMQQ Y+D DPL+ +DQL+V
Sbjct: 1856 DWKNRNRPPRAPGQRLDIYSSEEQDVLKDIEPIMQSIRRIMQQQGYSDGDPLAAEDQLFV 1915
Query: 296 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 117
L+NVF +HPDK KMG G+DYVMV+KHSSFQ+SRCFY+V DG+ +DFSYRKC+ N++ +
Sbjct: 1916 LENVFEHHPDKETKMGAGIDYVMVNKHSSFQESRCFYVVCKDGQSKDFSYRKCLANYISK 1975
Query: 116 KYPGMAESFNAKYLRKPPHSG 54
KYP +AESF KY RKP G
Sbjct: 1976 KYPDLAESFLGKYFRKPRARG 1996
>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
Length = 2113
Score = 184 bits (467), Expect = 1e-44
Identities = 83/149 (55%), Positives = 113/149 (75%)
Frame = -3
Query: 473 DWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVL 294
D N GIFTA++QRLD FT+EEQ +L + E IM +I+R+M Q+ YND DPLS DDQ Y++
Sbjct: 1902 DPNAPGIFTASRQRLDSFTAEEQEVLLETETIMKNIRRVMHQTGYNDGDPLSADDQKYIV 1961
Query: 293 DNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKEK 114
DNV +HP+K++K+G G+D++MV+KHS FQ SRC Y V+ DG + DFSYRKC++NF++ K
Sbjct: 1962 DNVLNHHPEKSLKIGAGLDHIMVNKHSEFQMSRCLYAVTIDGSKADFSYRKCLDNFIRGK 2021
Query: 113 YPGMAESFNAKYLRKPPHSGGGRRFSENR 27
YP +AESF AKY +KP G S++R
Sbjct: 2022 YPDVAESFIAKYFKKPQPRTGWNNNSKDR 2050
>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1 [Solanum lycopersicum]
Length = 1632
Score = 182 bits (463), Expect = 3e-44
Identities = 82/137 (59%), Positives = 106/137 (77%)
Frame = -3
Query: 473 DWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVL 294
D N+ G FTAT+Q++D FT+EEQ I++DV+PIML ++ DPLS DDQ Y++
Sbjct: 1485 DSNRGGHFTATRQKIDLFTAEEQEIISDVDPIMLKVR----------SDPLSADDQSYII 1534
Query: 293 DNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKEK 114
D V YHPDKAVKMG G+DY+ VSKH++FQD+RCFY+VSTDG ++DFS RKC+ENFV+ K
Sbjct: 1535 DTVLNYHPDKAVKMGAGLDYITVSKHTNFQDTRCFYVVSTDGAKQDFSTRKCLENFVRSK 1594
Query: 113 YPGMAESFNAKYLRKPP 63
YP AE+FN KY +KPP
Sbjct: 1595 YPDKAETFNEKYFKKPP 1611
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 182 bits (462), Expect = 4e-44
Identities = 91/163 (55%), Positives = 116/163 (71%), Gaps = 8/163 (4%)
Frame = -3
Query: 473 DW-NKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYV 297
DW NK+ RLD ++SEEQ IL D+EPI+ SI+RIMQQ YND DPL+ +DQ YV
Sbjct: 2057 DWKNKNRPARPPGPRLDLYSSEEQDILKDIEPIVQSIRRIMQQQGYNDGDPLAAEDQQYV 2116
Query: 296 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 117
L+NVF +HPDK KMG G+D+VMVS+HS+FQ+SRCFY+V DG++EDFSYRKC+E+FV++
Sbjct: 2117 LENVFEHHPDKETKMGVGIDHVMVSRHSNFQESRCFYVVLKDGKKEDFSYRKCLESFVRK 2176
Query: 116 KYPGMAESFNAKYLRKP-------PHSGGGRRFSENREQQM*P 9
KY AESF KY RKP +SGG + + EQ P
Sbjct: 2177 KYADTAESFCGKYFRKPRPKRDQIANSGGEQTANPGGEQTATP 2219
>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1|
Protein DCL [Medicago truncatula]
Length = 481
Score = 179 bits (455), Expect = 3e-43
Identities = 85/137 (62%), Positives = 104/137 (75%), Gaps = 1/137 (0%)
Frame = -3
Query: 473 DW-NKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYV 297
DW N+S QR + +T EEQ I+ D+EPI+ SI+RIMQ YND DPL+ +DQ YV
Sbjct: 271 DWKNRSRPVRPPGQRFELYTPEEQDIMKDIEPIVQSIRRIMQLQGYNDGDPLANEDQKYV 330
Query: 296 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 117
L+NVF +HPDK KMG GVD+VMVSKHS+FQDSRC Y+V DG++EDFSYRKC+EN V++
Sbjct: 331 LENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRK 390
Query: 116 KYPGMAESFNAKYLRKP 66
KYP AESF KY RKP
Sbjct: 391 KYPETAESFCGKYFRKP 407
>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
subunit [Medicago truncatula]
Length = 2032
Score = 179 bits (455), Expect = 3e-43
Identities = 85/137 (62%), Positives = 104/137 (75%), Gaps = 1/137 (0%)
Frame = -3
Query: 473 DW-NKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYV 297
DW N+S QR + +T EEQ I+ D+EPI+ SI+RIMQ YND DPL+ +DQ YV
Sbjct: 1822 DWKNRSRPVRPPGQRFELYTPEEQDIMKDIEPIVQSIRRIMQLQGYNDGDPLANEDQKYV 1881
Query: 296 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 117
L+NVF +HPDK KMG GVD+VMVSKHS+FQDSRC Y+V DG++EDFSYRKC+EN V++
Sbjct: 1882 LENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRK 1941
Query: 116 KYPGMAESFNAKYLRKP 66
KYP AESF KY RKP
Sbjct: 1942 KYPETAESFCGKYFRKP 1958
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 172 bits (437), Expect = 4e-41
Identities = 76/127 (59%), Positives = 102/127 (80%)
Frame = -3
Query: 449 TATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVLDNVFTYHP 270
TAT++R+D+F +EE+ +L++VE +M SI+RIM QS D +PL PDDQ Y++DN+ YHP
Sbjct: 1741 TATRKRMDEFPTEEKDVLSEVESLMQSIRRIMHQSGCVDGEPLLPDDQTYLIDNILNYHP 1800
Query: 269 DKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKEKYPGMAESF 90
DKA K+G GVD++ V KHS+FQ+SRCFY+VSTDG+ DFSY KC+E FVK KYP +AESF
Sbjct: 1801 DKAAKIGAGVDFITVKKHSNFQESRCFYVVSTDGKDTDFSYIKCIETFVKGKYPSVAESF 1860
Query: 89 NAKYLRK 69
+KY R+
Sbjct: 1861 TSKYFRR 1867