BLASTX nr result
ID: Akebia24_contig00043263
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00043263
(265 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_001876562.1| photosystem II protein D2 [Welwitschia mirab... 73 4e-11
ref|NP_569626.1| photosystem II protein D2 [Psilotum nudum] gi|7... 73 5e-11
gb|AGQ03791.1| photosystem II protein D2 (chloroplast) [Helminth... 73 5e-11
gb|AFM54146.1| PsbD (chloroplast) [Ceratozamia hildae] gi|392283... 73 5e-11
ref|YP_005352943.1| psbD gene product (chloroplast) [Mankyua che... 73 5e-11
dbj|BAL03645.1| photosystem II protein D2 (chloroplast) [Bowenia... 73 5e-11
gb|ACA49176.1| photosystem II D2 protein [Tmesipteris elongata] 73 5e-11
gb|ACA49170.1| photosystem II D2 protein [Helminthostachys zeyla... 73 5e-11
ref|YP_001312191.1| photosystem II protein D2 [Cycas taitungensi... 73 5e-11
gb|AAW21845.1| photosystem II D2 protein, partial (chloroplast) ... 73 5e-11
gb|AAQ04781.1| photosystem II D2 protein [Bowenia serrulata] 73 5e-11
gb|AAQ04785.1| photosystem II D2 protein [Ceratozamia miqueliana... 73 5e-11
gb|AAQ04787.1| photosystem II D2 protein [Cycas revoluta] 73 5e-11
gb|AAF73303.1| photosystem II D2 protein [Zamia furfuracea] 73 5e-11
gb|ADZ93625.1| photosystem II D2 protein [Joinvillea ascendens] 72 6e-11
gb|AFA27472.1| photosystem II protein D2 [Joinvillea ascendens] 72 6e-11
gb|ACT67287.1| photosystem II protein D2, partial (chloroplast) ... 72 6e-11
gb|ABR21942.1| photosystem II D2 protein [Joinvillea plicata] 72 6e-11
gb|AGQ03784.1| photosystem II protein D2 (chloroplast) [Vandenbo... 72 8e-11
gb|ADD30568.1| photosystem II protein D2 [Aucuba japonica] 72 8e-11
>ref|YP_001876562.1| photosystem II protein D2 [Welwitschia mirabilis]
gi|221222715|sp|B2Y1U5.1|PSBD_WELMI RecName:
Full=Photosystem II D2 protein; Short=PSII D2 protein;
AltName: Full=Photosystem Q(A) protein
gi|163311617|gb|ABY26775.1| photosystem II protein D2
[Welwitschia mirabilis] gi|220983405|dbj|BAH11174.1|
photosystem II protein D2 (chloroplast) [Welwitschia
mirabilis]
Length = 353
Score = 73.2 bits (178), Expect = 4e-11
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV FHG+FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+
Sbjct: 114 FVAFHGAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI 160
>ref|NP_569626.1| photosystem II protein D2 [Psilotum nudum]
gi|75248913|sp|Q8WI19.1|PSBD_PSINU RecName:
Full=Photosystem II D2 protein; Short=PSII D2 protein;
AltName: Full=Photosystem Q(A) protein
gi|18389461|dbj|BAB84213.1| PSII D2-protein [Psilotum
nudum] gi|441018014|gb|AGC26790.1| photosystem II D2
protein (chloroplast) [Psilotum nudum]
Length = 353
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
F+ FHG+FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+
Sbjct: 114 FIAFHGAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI 160
>gb|AGQ03791.1| photosystem II protein D2 (chloroplast) [Helminthostachys
zeylanica]
Length = 353
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV FHGSFGLIGFM+ F+LA SVQL+PYNAI FS IAVFVSVFL+
Sbjct: 114 FVAFHGSFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLI 160
>gb|AFM54146.1| PsbD (chloroplast) [Ceratozamia hildae] gi|392283332|gb|AFM54147.1|
PsbD (chloroplast) [Zamia furfuracea]
Length = 353
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+
Sbjct: 114 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI 160
>ref|YP_005352943.1| psbD gene product (chloroplast) [Mankyua chejuensis]
gi|325975839|gb|ADZ47975.1| photosystem II protein D2
[Mankyua chejuensis]
Length = 353
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV FHGSFGLIGFM+ F+LA SVQL+PYNAI FS IAVFVSVFL+
Sbjct: 114 FVAFHGSFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLI 160
>dbj|BAL03645.1| photosystem II protein D2 (chloroplast) [Bowenia serrulata]
Length = 353
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+
Sbjct: 114 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI 160
>gb|ACA49176.1| photosystem II D2 protein [Tmesipteris elongata]
Length = 322
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
F+ FHG+FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+
Sbjct: 83 FIAFHGAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI 129
>gb|ACA49170.1| photosystem II D2 protein [Helminthostachys zeylanica]
Length = 326
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV FHGSFGLIGFM+ F+LA SVQL+PYNAI FS IAVFVSVFL+
Sbjct: 87 FVAFHGSFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLI 133
>ref|YP_001312191.1| photosystem II protein D2 [Cycas taitungensis]
gi|452848984|ref|YP_007474663.1| photosystem II protein
D2 (chloroplast) [Cycas revoluta]
gi|221222684|sp|A6H5G6.1|PSBD_CYCTA RecName:
Full=Photosystem II D2 protein; Short=PSII D2 protein;
AltName: Full=Photosystem Q(A) protein
gi|149941508|dbj|BAF64932.1| photosystem II protein D2
(chloroplast) [Cycas taitungensis]
gi|156598075|gb|ABU85303.1| photosystem II protein D2
[Cycas micronesica] gi|372863139|gb|AEX99212.1|
photosystem II protein D2 (chloroplast) [Cycas revoluta]
Length = 353
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+
Sbjct: 114 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI 160
>gb|AAW21845.1| photosystem II D2 protein, partial (chloroplast) [Microcycas
calocoma]
Length = 312
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+
Sbjct: 73 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI 119
>gb|AAQ04781.1| photosystem II D2 protein [Bowenia serrulata]
Length = 326
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+
Sbjct: 87 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI 133
>gb|AAQ04785.1| photosystem II D2 protein [Ceratozamia miqueliana]
gi|33317762|gb|AAQ04791.1| photosystem II D2 protein
[Encephalartos barteri] gi|33317771|gb|AAQ04797.1|
photosystem II D2 protein [Stangeria eriopus]
gi|56683010|gb|AAW21841.1| photosystem II D2 protein,
partial (chloroplast) [Lepidozamia hopei]
gi|56683013|gb|AAW21843.1| photosystem II D2 protein,
partial (chloroplast) [Macrozamia moorei]
Length = 326
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+
Sbjct: 87 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI 133
>gb|AAQ04787.1| photosystem II D2 protein [Cycas revoluta]
Length = 326
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+
Sbjct: 87 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI 133
>gb|AAF73303.1| photosystem II D2 protein [Zamia furfuracea]
Length = 326
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+
Sbjct: 87 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI 133
>gb|ADZ93625.1| photosystem II D2 protein [Joinvillea ascendens]
Length = 294
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV HGSFGLIGFM+ F+LA SVQL+PYNAI+FSA IAVFVSVFL+
Sbjct: 55 FVALHGSFGLIGFMLRQFELARSVQLRPYNAISFSAPIAVFVSVFLI 101
>gb|AFA27472.1| photosystem II protein D2 [Joinvillea ascendens]
Length = 353
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV HGSFGLIGFM+ F+LA SVQL+PYNAI+FSA IAVFVSVFL+
Sbjct: 114 FVALHGSFGLIGFMLRQFELARSVQLRPYNAISFSAPIAVFVSVFLI 160
>gb|ACT67287.1| photosystem II protein D2, partial (chloroplast) [Joinvillea
plicata]
Length = 345
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV HGSFGLIGFM+ F+LA SVQL+PYNAI+FSA IAVFVSVFL+
Sbjct: 106 FVALHGSFGLIGFMLRQFELARSVQLRPYNAISFSAPIAVFVSVFLI 152
>gb|ABR21942.1| photosystem II D2 protein [Joinvillea plicata]
Length = 326
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV HGSFGLIGFM+ F+LA SVQL+PYNAI+FSA IAVFVSVFL+
Sbjct: 87 FVALHGSFGLIGFMLRQFELARSVQLRPYNAISFSAPIAVFVSVFLI 133
>gb|AGQ03784.1| photosystem II protein D2 (chloroplast) [Vandenboschia radicans]
Length = 353
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 194 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
FV FHGSF LIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+
Sbjct: 114 FVAFHGSFALIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI 160
>gb|ADD30568.1| photosystem II protein D2 [Aucuba japonica]
Length = 353
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = -3
Query: 197 VFVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLV 54
+FV HG+FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+
Sbjct: 113 IFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI 160