BLASTX nr result
ID: Akebia24_contig00042642
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00042642
(297 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 88 1e-15
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 87 2e-15
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 87 2e-15
gb|AAB82754.1| retrofit [Oryza longistaminata] 86 7e-15
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 84 3e-14
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 83 4e-14
ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266... 83 5e-14
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group] 82 6e-14
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 82 6e-14
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group] 82 6e-14
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 81 1e-13
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 81 1e-13
gb|EEC76476.1| hypothetical protein OsI_14211 [Oryza sativa Indi... 81 2e-13
gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indi... 80 2e-13
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc... 80 2e-13
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 80 2e-13
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 80 2e-13
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 80 3e-13
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 80 3e-13
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 78 1e-12
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 88.2 bits (217), Expect = 1e-15
Identities = 50/99 (50%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
+L GP HGLY LP S + AF V +L+RWH RLGHPS+ IV +VISS++LP
Sbjct: 320 VLKGPRRHGLYPLPSTSSTKQ-----AFAVA-PSLERWHSRLGHPSIPIVMKVISSNKLP 373
Query: 115 IIPHK-VHSVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
+ SVC+ACQK K+HQLP S SVS PL L++
Sbjct: 374 CLRESNKESVCDACQKAKSHQLPYSNSMSVSNKPLELIY 412
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 87.0 bits (214), Expect = 2e-15
Identities = 51/99 (51%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
LL G HGLY PI S + + A + +L RWH RLGHPSL IV QVIS + LP
Sbjct: 426 LLEGKCRHGLY--PIPKSFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLP 483
Query: 115 IIPHKVH-SVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
V+ SVC ACQ+ K+HQLP S+SVS PL LVF
Sbjct: 484 CSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVF 522
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 87.0 bits (214), Expect = 2e-15
Identities = 51/99 (51%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
LL G HGLY PI S + + A + +L RWH RLGHPSL IV QVIS + LP
Sbjct: 426 LLEGKCRHGLY--PIPKSFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLP 483
Query: 115 IIPHKVH-SVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
V+ SVC ACQ+ K+HQLP S+SVS PL LVF
Sbjct: 484 CSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVF 522
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 85.5 bits (210), Expect = 7e-15
Identities = 52/101 (51%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Frame = -3
Query: 295 LLHGPSDHGLYKLP--IRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQ 122
LL G HGLY +P S NK A + +L RWH RLGHPSL IV QVIS +
Sbjct: 422 LLEGKCRHGLYPIPKFFGRSTNKQ----ALGAAKLSLSRWHSRLGHPSLPIVKQVISRNN 477
Query: 121 LPIIPHKVH-SVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
LP V+ SVC ACQ+ K+HQLP S+SVS PL LVF
Sbjct: 478 LPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVF 518
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 83.6 bits (205), Expect = 3e-14
Identities = 49/99 (49%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
LL GP +GLY LP + L A + T+ RWH RLGHPSL IV +V+SS+ LP
Sbjct: 1382 LLRGPCRNGLYPLPTSSLATSKQVLGAI---KPTMSRWHSRLGHPSLAIVQKVVSSNNLP 1438
Query: 115 IIPHKVHS-VCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
+ S VC ACQ+ K+HQLP S SVS PL LVF
Sbjct: 1439 CLGDVNESGVCNACQQAKSHQLPYPKSFSVSNNPLELVF 1477
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 83.2 bits (204), Expect = 4e-14
Identities = 50/99 (50%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
LL G HGLY PI S + A + +L RWH RLGHPSL IV QVIS + LP
Sbjct: 423 LLEGRCRHGLY--PIPKSFGRTTSKQALGTTKLSLSRWHSRLGHPSLPIVKQVISKNNLP 480
Query: 115 IIPHKVH-SVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
V+ SVC ACQ+ K+ QLP S+SVS PL LVF
Sbjct: 481 CSVESVNQSVCNACQEAKSRQLPYVRSTSVSQFPLELVF 519
>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
lycopersicum]
Length = 544
Score = 82.8 bits (203), Expect = 5e-14
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Frame = -3
Query: 295 LLHGPSDHGLYK-----LPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVIS 131
LL G D GLY+ LP+ S AFV+ RA+L WH RLGHP ++ +++S
Sbjct: 443 LLRGSIDDGLYRFDGGGLPVISSSTPR----AFVISRASLQAWHERLGHPHEQLLRRLVS 498
Query: 130 SHQLPIIPHKVHSVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
S LP+ +K+ +VC +CQ GK+H++PL +SSS S P +LV+
Sbjct: 499 SFNLPVTSNKMPAVCGSCQLGKSHRIPLASSSSRSSFPFDLVY 541
>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
Length = 1087
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/98 (42%), Positives = 57/98 (58%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
LL G S GLY +P++ + + R A V + RWH RLGHPS +V +V+ H +P
Sbjct: 411 LLQGRSRGGLYPIPLKSTTPQGRQ--ALVSTSSAESRWHSRLGHPSFSVVSRVLRKHNIP 468
Query: 115 IIPHKVHSVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
+ + VC+ACQ+ K+HQLP S S S PL LVF
Sbjct: 469 VSESREERVCDACQQAKSHQLPYSRSVSRSSAPLELVF 506
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 82.4 bits (202), Expect = 6e-14
Identities = 47/99 (47%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
LL GP +GLY LP S +K + T+ WH RLGHPS IV +V+S + LP
Sbjct: 416 LLRGPCCNGLYPLPASTSSSKQ----VLGAIKPTVSIWHSRLGHPSWQIVQKVVSHNNLP 471
Query: 115 IIPH-KVHSVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
+ K VC+ACQKGK+HQLP S+S S PL LVF
Sbjct: 472 CLGESKELGVCDACQKGKSHQLPFLKSTSASNFPLELVF 510
>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
Length = 1131
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/98 (42%), Positives = 57/98 (58%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
LL G S GLY +P++ + + R A V + RWH RLGHPS +V +V+ H +P
Sbjct: 411 LLQGRSRGGLYPIPLKSTTPQGRQ--ALVSTSSAESRWHSRLGHPSFSVVSRVLRKHNIP 468
Query: 115 IIPHKVHSVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
+ + VC+ACQ+ K+HQLP S S S PL LVF
Sbjct: 469 VSESREERVCDACQQAKSHQLPYSRSVSRSSAPLELVF 506
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 81.3 bits (199), Expect = 1e-13
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
+L GP GLY LP R S + AFV + + RWH RLGHPS IV +++S ++LP
Sbjct: 423 ILEGPCRRGLYPLPARSSLRQ-----AFVATPSFV-RWHGRLGHPSKPIVLRILSQNKLP 476
Query: 115 IIPHKVH-SVCEACQKGKNHQLPLYTSSSVSMGPLNLV 5
+ + V+ SVC+ACQ+ K HQLP S+SVS PL L+
Sbjct: 477 CLSNSVNESVCDACQQAKCHQLPFPRSTSVSNNPLELI 514
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 81.3 bits (199), Expect = 1e-13
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
+L GP GLY LP R S + AFV + + RWH RLGHPS IV +++S ++LP
Sbjct: 414 ILEGPCRRGLYPLPARSSLRQ-----AFVATPSFV-RWHGRLGHPSKPIVLRILSQNKLP 467
Query: 115 IIPHKVH-SVCEACQKGKNHQLPLYTSSSVSMGPLNLV 5
+ + V+ SVC+ACQ+ K HQLP S+SVS PL L+
Sbjct: 468 CLSNSVNESVCDACQQAKCHQLPFPRSTSVSNNPLELI 505
>gb|EEC76476.1| hypothetical protein OsI_14211 [Oryza sativa Indica Group]
Length = 178
Score = 80.9 bits (198), Expect = 2e-13
Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
+L G LY LP P++ H T + RWH RLGHP++ IV +V+S + LP
Sbjct: 65 ILKGRCRRRLYSLPTSPAKQVHAATTP------SFSRWHSRLGHPAVPIVTRVLSKNNLP 118
Query: 115 I--IPHKVHSVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
I +K S+C+ACQKGK+HQLP SSSVS PL L+F
Sbjct: 119 CSTIANK-DSICDACQKGKSHQLPYPKSSSVSSQPLELIF 157
>gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indica Group]
Length = 506
Score = 80.5 bits (197), Expect = 2e-13
Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
+L G LY LP P++ H T + RWH RLGHP++ IV +V+S + LP
Sbjct: 411 ILKGRCRRRLYSLPTSPAKQVHAATTP------SFSRWHSRLGHPAVPIVTRVLSKNNLP 464
Query: 115 I--IPHKVHSVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
+ +K S+C+ACQKGK+HQLP SSSVS PL L+F
Sbjct: 465 CSTVANK-DSICDACQKGKSHQLPYPKSSSVSSQPLELIF 503
>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 80.5 bits (197), Expect = 2e-13
Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
+L G LY LP P++ H T + RWH RLGHP++ IV +V+S + LP
Sbjct: 411 ILKGRCRRRLYSLPTSPAKQVHAATTP------SFSRWHSRLGHPAVPIVTRVLSKNNLP 464
Query: 115 I--IPHKVHSVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
+ +K S+C+ACQKGK+HQLP SSSVS PL L+F
Sbjct: 465 CSTVANK-DSICDACQKGKSHQLPYPKSSSVSSQPLELIF 503
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 80.5 bits (197), Expect = 2e-13
Identities = 46/99 (46%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
LL G GLY LP PS + H+ + V + + +RWH RLGHPS +V +VI S LP
Sbjct: 420 LLRGRCHKGLYALP-SPSSHHHQVKQVYGVTKPSFERWHSRLGHPSYTVVEKVIKSQNLP 478
Query: 115 IIP-HKVHSVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
+ + SVC+ACQK K+HQL S+S S PL LVF
Sbjct: 479 CLDVSEQVSVCDACQKAKSHQLSFPKSTSESKYPLELVF 517
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 80.5 bits (197), Expect = 2e-13
Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQLP 116
+L G LY LP P++ H T + RWH RLGHP++ IV +V+S + LP
Sbjct: 389 ILKGRCRRRLYSLPTSPAKQVHAATTP------SFSRWHSRLGHPAVPIVTRVLSKNNLP 442
Query: 115 I--IPHKVHSVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
+ +K S+C+ACQKGK+HQLP SSSVS PL L+F
Sbjct: 443 CSTVANK-DSICDACQKGKSHQLPYPKSSSVSSQPLELIF 481
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 80.1 bits (196), Expect = 3e-13
Identities = 48/99 (48%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLT-AFVVERATLDRWH*RLGHPSLHIVCQVISSHQL 119
LL G S LY LP H L A+ + +LDRWH RLGHPS+ V QV++ L
Sbjct: 422 LLKGRSWRRLYPLP-------HSSLKQAYSAIKLSLDRWHHRLGHPSITTVKQVVNKFSL 474
Query: 118 PIIPHKVHSVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
P SVC ACQ+ K+HQLP SSSVS PL LVF
Sbjct: 475 PCSDLSSESVCNACQQAKSHQLPFPISSSVSKHPLELVF 513
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 80.1 bits (196), Expect = 3e-13
Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQNKHRDLT-AFVVERATLDRWH*RLGHPSLHIVCQVISSHQL 119
L GP LY LP + R L AF + + +RWH RLGHP+ IV +VIS + L
Sbjct: 420 LFRGPCRGRLYALPSSSPHERPRPLKEAFGAIKPSFERWHSRLGHPASPIVEKVISKNNL 479
Query: 118 PIIPHK-VHSVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
P + SVC+ACQ+GK+HQLP SSS+S PL L++
Sbjct: 480 PCLAESNKQSVCDACQQGKSHQLPYSRSSSMSSHPLELIY 519
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 78.2 bits (191), Expect = 1e-12
Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = -3
Query: 295 LLHGPSDHGLYKLPIRPSQN-KHRDLTAFVVERATLDRWH*RLGHPSLHIVCQVISSHQL 119
LLHG GLY LP P KH F R L+ WH RLGHPS IV +VIS++ L
Sbjct: 424 LLHGKCRDGLYPLPPHPDLRLKHN----FSSTRVPLEHWHKRLGHPSRDIVHRVISNNNL 479
Query: 118 PIIP-HKVHSVCEACQKGKNHQLPLYTSSSVSMGPLNLVF 2
P + + SVC+AC + K HQLP S S S PL L+F
Sbjct: 480 PCLSNNSTTSVCDACLQAKAHQLPYTISMSQSSAPLMLIF 519