BLASTX nr result
ID: Akebia24_contig00038446
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00038446
(270 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV35810.1| retrotransposon protein, putative, Ty3-gypsy sub-... 72 6e-11
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 69 7e-10
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 69 7e-10
gb|ABA96965.2| retrotransposon protein, putative, Ty3-gypsy subc... 68 2e-09
ref|XP_004980437.1| PREDICTED: uncharacterized protein LOC101781... 62 8e-08
gb|AAN09859.1| putative polyprotein [Oryza sativa Japonica Group] 62 8e-08
gb|ABG65972.1| retrotransposon protein, putative, Ty3-gypsy subc... 62 8e-08
emb|CAD40072.1| OSJNBa0085C10.25 [Oryza sativa Japonica Group] 62 1e-07
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624... 61 1e-07
emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera] 60 2e-07
gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptas... 60 3e-07
ref|XP_007206289.1| hypothetical protein PRUPE_ppa016403mg, part... 59 9e-07
ref|XP_006575997.1| PREDICTED: uncharacterized protein LOC100809... 58 2e-06
ref|XP_004980298.1| PREDICTED: uncharacterized protein LOC101759... 58 2e-06
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 57 3e-06
ref|XP_006586482.1| PREDICTED: uncharacterized protein LOC100808... 57 3e-06
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 57 3e-06
gb|AAD19758.1| putative Ty3-gypsy-like retroelement pol polyprot... 57 3e-06
ref|XP_007227239.1| hypothetical protein PRUPE_ppa018267mg [Prun... 57 4e-06
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 57 4e-06
>gb|AAV35810.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|108709581|gb|ABF97376.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 651
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/87 (39%), Positives = 53/87 (60%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++D + VT +SF+IG Y D + CD+VS++ +L RL HDND T+ G++N Y
Sbjct: 477 WLNDSGRAKVTQVCRVSFSIGSYADSVDCDVVSMQACSLLLGRLWEHDNDATHHGRSNKY 536
Query: 185 SFMHNGVKVIQYPSDNKLKAIEPTKEK 265
+F+HNG K+ P + +E KE+
Sbjct: 537 TFVHNGKKITLLPL-TPAEIVEADKER 562
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/73 (41%), Positives = 46/73 (63%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++D + V Q +SFN+G+Y+DEI+CD+V ++ H+L R +D D T+ G+ N Y
Sbjct: 470 WLNDCGEVQVNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDTTHHGRKNRY 529
Query: 185 SFMHNGVKVIQYP 223
S +HNG K P
Sbjct: 530 SLLHNGKKYTLAP 542
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/73 (41%), Positives = 46/73 (63%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++D + V Q +SFN+G+Y+DEI+CD+V ++ H+L R +D D T+ G+ N Y
Sbjct: 470 WLNDCGEVQVNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDTTHHGRKNRY 529
Query: 185 SFMHNGVKVIQYP 223
S +HNG K P
Sbjct: 530 SLLHNGKKYTLAP 542
>gb|ABA96965.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/87 (36%), Positives = 51/87 (58%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++D + VT +SF+IG Y D + CD+V ++ +L R HDND T+ G++N Y
Sbjct: 364 WLNDSGRAKVTQVCRVSFSIGSYADSVDCDVVPMQACSLLLGRPWEHDNDATHHGRSNKY 423
Query: 185 SFMHNGVKVIQYPSDNKLKAIEPTKEK 265
+F+HNG K+ P + +E KE+
Sbjct: 424 TFVHNGKKITLLPL-TPAEIVEADKER 449
>ref|XP_004980437.1| PREDICTED: uncharacterized protein LOC101781709 [Setaria italica]
Length = 1055
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/87 (34%), Positives = 50/87 (57%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++D K VT +SF+IG Y D + CD+V ++ +L R HDND T+ G++N Y
Sbjct: 526 WLNDSGKAKVTQTCRVSFSIGAYADFVDCDVVPMQACSLLLGRPWEHDNDATHHGRSNKY 585
Query: 185 SFMHNGVKVIQYPSDNKLKAIEPTKEK 265
+ M+ G K+ P ++ ++ KE+
Sbjct: 586 TLMYKGQKITLVPL-TPVEIVQADKER 611
>gb|AAN09859.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 928
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++D + VT + F+IG Y D + CD+V ++ +L HDND T+ G++N Y
Sbjct: 539 WLNDSGRAKVTQVCRVLFSIGSYADSVDCDVVPMQACSLLLGCPWEHDNDATHHGRSNKY 598
Query: 185 SFMHNGVKVIQYP 223
+F+HNG K I P
Sbjct: 599 TFVHNGKKFILLP 611
>gb|ABG65972.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1315
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++D + VT + F+IG Y D + CD+V ++ +L HDND T+ G++N Y
Sbjct: 539 WLNDSGRAKVTQVCRVLFSIGSYADSVDCDVVPMQACSLLLGCPWEHDNDATHHGRSNKY 598
Query: 185 SFMHNGVKVIQYP 223
+F+HNG K I P
Sbjct: 599 TFVHNGKKFILLP 611
>emb|CAD40072.1| OSJNBa0085C10.25 [Oryza sativa Japonica Group]
Length = 625
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++D + +SF+IG Y D + CD+V ++ L R HDND T+ G++N Y
Sbjct: 220 WLNDSGRAKAIQVCRVSFSIGSYADFVDCDVVPMKACSFLLGRPWEHDNDATHHGRSNKY 279
Query: 185 SFMHNGVKVIQYP 223
+F+HNG K+ P
Sbjct: 280 TFVHNGKKITLLP 292
>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
Length = 1083
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++D + V Q +SF+IG+YKD+++CD+V + HIL R +D VT+ G N Y
Sbjct: 280 WLNDYGEVKVNKQVLVSFSIGRYKDDVLCDVVPMHAGHILLGRPWQYDRRVTHDGYLNRY 339
Query: 185 SFMHNGVKVIQYP 223
SF+ N K+ P
Sbjct: 340 SFVINKRKITLVP 352
>emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
Length = 818
Score = 60.5 bits (145), Expect = 2e-07
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++D + V + +SF+IG+YKDE++CDIV + HIL R D V + G N Y
Sbjct: 463 WLNDFGEDKVNKEVLVSFSIGRYKDEVLCDIVPMHAGHILLGRPWQFDRKVNHDGFKNRY 522
Query: 185 SFMHNGVKVIQYP-SDNKLKAIEPTKEKE 268
SF+ N + P + + K E KE E
Sbjct: 523 SFIKNNKTITLVPLTPRQKKESENXKESE 551
>gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/77 (37%), Positives = 45/77 (58%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W+ + + V Q ++F+IG+Y DEI+CD+V + HIL R D +V + GKANT+
Sbjct: 4 WLKEGVELLVDKQVLVNFSIGKYNDEILCDVVPMEAGHILLGRPWQFDRNVFHDGKANTF 63
Query: 185 SFMHNGVKVIQYPSDNK 235
+F+H K+ P K
Sbjct: 64 TFVHKKHKISLLPLSPK 80
>ref|XP_007206289.1| hypothetical protein PRUPE_ppa016403mg, partial [Prunus persica]
gi|462401931|gb|EMJ07488.1| hypothetical protein
PRUPE_ppa016403mg, partial [Prunus persica]
Length = 507
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W+DD +T + + YKD + CD+VS+ HIL R ++D++VT G+ N
Sbjct: 405 WMDDTSSIPITQRCQVPIEFSSYKDHVWCDVVSMEVNHILLGRPWIYDHNVTILGRENIC 464
Query: 185 SFMHNGVKVIQYPSDNK-LKAIEPTKE 262
SF+H G + P K + P KE
Sbjct: 465 SFIHKGKNITLKPLQPKFVNQFPPNKE 491
>ref|XP_006575997.1| PREDICTED: uncharacterized protein LOC100809438 [Glycine max]
Length = 527
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/88 (35%), Positives = 48/88 (54%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W+ + + V Q + F+IG+Y DEI+ D+V + H+L R +D DV + G N +
Sbjct: 406 WLSENGELVVDRQVLIYFSIGKYVDEIMFDVVPMEASHLLLGRPWQYDRDVVHNGVTNKF 465
Query: 185 SFMHNGVKVIQYPSDNKLKAIEPTKEKE 268
SF+H G KV LK + P++ KE
Sbjct: 466 SFVHKGQKV-------TLKPLSPSEVKE 486
>ref|XP_004980298.1| PREDICTED: uncharacterized protein LOC101759439 [Setaria italica]
Length = 696
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/73 (39%), Positives = 40/73 (54%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++ K VT ++F IG Y D I CD+V I+ +L R D D + GK N Y
Sbjct: 145 WLNSSGKVKVTQLVRVNFAIGSYHDSIDCDVVPIQACSMLLGRPWQFDIDSLHHGKTNQY 204
Query: 185 SFMHNGVKVIQYP 223
SFMHN K++ +P
Sbjct: 205 SFMHNDKKLVLHP 217
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++ K VT + F IG Y D I CD+V ++ +L R D D + GK+N Y
Sbjct: 538 WLNSSGKVKVTRLVRVHFAIGSYHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQY 597
Query: 185 SFMHNGVKVIQYP 223
SF+HNG K++ +P
Sbjct: 598 SFVHNGKKLVLHP 610
>ref|XP_006586482.1| PREDICTED: uncharacterized protein LOC100808853 [Glycine max]
Length = 584
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W + + V Q + F+IG+Y DEI+ D+V + H+L RL +D D + G N +
Sbjct: 357 WSSENGELIVDRQVLICFSIGKYVDEILFDVVPMEASHLLLGRLWQYDRDAVHNGVTNKF 416
Query: 185 SFMHNGVKVIQYPSDNKLKAI 247
SF+H G KV P L+ +
Sbjct: 417 SFVHKGQKVTLKPLSPSLEEL 437
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++ K VT + F IG Y D I CD+V ++ +L R D D + GK+N Y
Sbjct: 538 WLNSSGKVKVTRLVRVHFAIGSYHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQY 597
Query: 185 SFMHNGVKVIQYP 223
SF+HNG K++ +P
Sbjct: 598 SFVHNGKKLVLHP 610
>gb|AAD19758.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
thaliana]
Length = 587
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 2 GWVDDECKKNVTSQYSLSFNIGQ-YKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKAN 178
GWV + V+ + +IG+ YK+E++CD++++ HI+ R +DND+TY+GK N
Sbjct: 271 GWVSKGSQFCVSLSCRVPISIGKHYKEEVLCDVLNMDVCHIILGRSWQYDNDITYRGKDN 330
Query: 179 TYSFMHNGVKVIQYP 223
F NG K++ P
Sbjct: 331 VLMFTWNGHKIVMAP 345
>ref|XP_007227239.1| hypothetical protein PRUPE_ppa018267mg [Prunus persica]
gi|462424175|gb|EMJ28438.1| hypothetical protein
PRUPE_ppa018267mg [Prunus persica]
Length = 513
Score = 56.6 bits (135), Expect = 4e-06
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W+D+ VT + YKD + CD+V + HIL R ++D +VT G+ N +
Sbjct: 361 WIDNTSSIPVTQWCHVPIQFSSYKDHVWCDVVDMDVSHILLGRPWIYDYNVTILGQENIH 420
Query: 185 SFMHNGVKVIQYPSDNKL--KAIEPTKEKE 268
SF+H G K+ P KL ++I+ +E++
Sbjct: 421 SFIHKGKKITMKPLQPKLVNQSIQNKEEQD 450
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 56.6 bits (135), Expect = 4e-06
Identities = 28/73 (38%), Positives = 40/73 (54%)
Frame = +2
Query: 5 WVDDECKKNVTSQYSLSFNIGQYKDEIICDIVSIRTRHILSRRL*LHDNDVTYQGKANTY 184
W++ K VT + F IG Y D I CD+V ++ I R D D + GK+N Y
Sbjct: 538 WLNSSGKVKVTRLVRVHFAIGSYHDSINCDVVPMQACSIFLGRPWQFDKDSLHFGKSNQY 597
Query: 185 SFMHNGVKVIQYP 223
SF+HNG K++ +P
Sbjct: 598 SFVHNGKKLVLHP 610