BLASTX nr result

ID: Akebia24_contig00038207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00038207
         (292 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280741.1| PREDICTED: nuclear transcription factor Y su...    62   8e-08
ref|XP_002311837.2| hypothetical protein POPTR_0008s20780g [Popu...    60   2e-07

>ref|XP_002280741.1| PREDICTED: nuclear transcription factor Y subunit C-9-like [Vitis
           vinifera]
          Length = 262

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 38/84 (45%), Positives = 44/84 (52%), Gaps = 23/84 (27%)
 Frame = +1

Query: 1   REDLKDEV----PSGGTMPVGDLADPLPYYYMTPQLSAQ-------------------QS 111
           REDLKDEV    P GG +PVG  A+ LPY+YM PQ   Q                   Q 
Sbjct: 181 REDLKDEVLASIPRGGPLPVGGPAEGLPYFYMQPQHGPQVGAPGMVMGKTVMDQGLYGQQ 240

Query: 112 HHPYLTQQVYPQSLQHHQQPPADS 183
             PY+ QQ++PQ  Q  QQPPADS
Sbjct: 241 PRPYVAQQMWPQ--QQQQQPPADS 262


>ref|XP_002311837.2| hypothetical protein POPTR_0008s20780g [Populus trichocarpa]
           gi|550333559|gb|EEE89204.2| hypothetical protein
           POPTR_0008s20780g [Populus trichocarpa]
          Length = 226

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 22/83 (26%)
 Frame = +1

Query: 1   REDLKDEVPSG---GTMPVGDLADPLPYYYMTPQLSAQ-------------------QSH 114
           REDLKDEV +    G++PVG  AD LPYYYM PQL+ Q                   Q  
Sbjct: 147 REDLKDEVLASVPRGSLPVGGPADALPYYYMPPQLAPQVSAPGMTVGKPVVDQAFYGQQS 206

Query: 115 HPYLTQQVYPQSLQHHQQPPADS 183
            PY+ QQ++PQ     QQPP DS
Sbjct: 207 RPYVPQQIWPQQT---QQPPEDS 226


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