BLASTX nr result

ID: Akebia24_contig00038153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00038153
         (314 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera]    71   2e-10
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            61   2e-07
emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]    56   5e-06
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          56   5e-06

>emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera]
          Length = 384

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 42/104 (40%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2   EILWLPQEKYIDKVLEMFNVDQTRLVSSPFLGHFDLICKQSPLKEIG*E--MKTFYRHQL 175
           E LWL QE YI+K+LE FN+ + ++V SP  GHF LI KQ P  E   E   K  Y   +
Sbjct: 224 EKLWLSQEAYIEKILERFNISKAKIVGSPLAGHFKLISKQCPTSEKENEEMSKVPYSSVV 283

Query: 176 *EV*RM**YVQGQTLQMQRGGSKFLVNPSKTHCVATPWILKYLK 307
             +       +       R  S+FL NP K H  A  WIL+YL+
Sbjct: 284 GNLMHAMVCTRPDIAHAVRVVSRFLSNPRKEHWAALKWILRYLR 327


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/104 (39%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
 Frame = +2

Query: 8    LWLPQEKYIDKVLEMFNVDQTRLVSSPFLGHFDLICKQSPLKEIG*EMKTFYRHQL*EV* 187
            LWL QEKYI+KVL+ FN+++T+ VS P   HF L  KQSP  +   E +   R       
Sbjct: 1059 LWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDD--ERRKMERIPYASAV 1116

Query: 188  RM**YVQGQT----LQMQRGGSKFLVNPSKTHCVATPWILKYLK 307
                Y    T           S+FL NP K H  A  WIL+YL+
Sbjct: 1117 GSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLR 1160


>emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]
          Length = 788

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 36/100 (36%), Positives = 47/100 (47%)
 Frame = +2

Query: 8   LWLPQEKYIDKVLEMFNVDQTRLVSSPFLGHFDLICKQSPLKEIG*EMKTFYRHQL*EV* 187
           LWL QE YI KVL+ FN+ + + VSSP   H  L  KQSP           Y   +  + 
Sbjct: 692 LWLSQENYIKKVLDKFNMGKAKPVSSPLGSHLKLSSKQSP--------SMXYASVVGSLM 743

Query: 188 RM**YVQGQTLQMQRGGSKFLVNPSKTHCVATPWILKYLK 307
            +    +          S+FL NP K H V   WILK+L+
Sbjct: 744 YVMACTRPDIAHAXEVVSRFLSNPGKEHWVTVKWILKHLR 783


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
 Frame = +2

Query: 8    LWLPQEKYIDKVLEMFNVDQTRLVSSPFLGHFDLICKQSPLKEIG*E--MKTFYRHQL*E 181
            LWL QEKYI+KVLE F++++ + VS+P   HF L  KQ P  E   E   +  Y   +  
Sbjct: 1056 LWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVGS 1115

Query: 182  V*RM**YVQGQTLQMQRGGSKFLVNPSKTHCVATPWILKYLK 307
            +       +          S+FL NP + H  A  WIL+YL+
Sbjct: 1116 LMYAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLR 1157


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