BLASTX nr result
ID: Akebia24_contig00034632
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00034632
(362 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 54 7e-09
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 59 3e-08
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 59 3e-08
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 59 3e-08
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 59 3e-08
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 58 6e-08
ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669... 55 6e-08
ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756... 60 8e-08
ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761... 60 8e-08
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 59 1e-07
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 53 2e-07
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 49 3e-07
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 57 3e-07
emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera] 50 4e-07
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 58 5e-07
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 58 5e-07
ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203... 49 5e-07
ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594... 58 5e-07
gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] 58 5e-07
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 51 6e-07
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 53.9 bits (128), Expect(2) = 7e-09
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 208
IP + + +R+ +F+SHFWR L LG+KL +ST CHPQ GQT
Sbjct: 1047 IPRTIVSDRDAKFLSHFWRILWGKLGTKLLYSTACHPQTDGQT 1089
Score = 31.6 bits (70), Expect(2) = 7e-09
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 164 QNTKN*VTSLPSLEFEFNKMPNRTTNFSPFK 72
+N K+ SLP +EF +N+ + TTN SPF+
Sbjct: 1106 KNLKSWEESLPYVEFAYNRAIHSTTNMSPFE 1136
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 58.5 bits (140), Expect(2) = 3e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 208
+PN+ + +R+ +F+SHFWR+L LG+KL FST CHPQ GQT
Sbjct: 1324 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQT 1366
Score = 25.0 bits (53), Expect(2) = 3e-08
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 164 QNTKN*VTSLPSLEFEFNKMPNRTTNFSPFK 72
+N K LP +EF +N+ + TT PF+
Sbjct: 1383 KNIKMWEECLPHIEFAYNRSLHSTTKMCPFQ 1413
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 58.5 bits (140), Expect(2) = 3e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 208
+PN+ + +R+ +F+SHFWR+L LG+KL FST CHPQ GQT
Sbjct: 1327 VPNTIVSDRDAKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQT 1369
Score = 25.0 bits (53), Expect(2) = 3e-08
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 164 QNTKN*VTSLPSLEFEFNKMPNRTTNFSPFK 72
+N K LP +EF +N+ + TT PF+
Sbjct: 1386 KNIKMWEDCLPHIEFAYNRSLHSTTKMCPFQ 1416
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 58.5 bits (140), Expect(2) = 3e-08
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*VKIESWET 181
+PN+ + +R+ +F+SHFWR L LG+KL FST CHPQ GQT V S T
Sbjct: 1383 VPNTIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLST 1434
Score = 24.6 bits (52), Expect(2) = 3e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 137 LPSLEFEFNKMPNRTTNFSPFK 72
LP +EF +N+ + TT PF+
Sbjct: 1451 LPHIEFAYNRSLHSTTKMCPFE 1472
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 58.5 bits (140), Expect(2) = 3e-08
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*VKIESWET 181
+PN+ + +R+ +F+SHFWR L LG+KL FST CHPQ GQT V S T
Sbjct: 1380 VPNTIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLST 1431
Score = 24.6 bits (52), Expect(2) = 3e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 137 LPSLEFEFNKMPNRTTNFSPFK 72
LP +EF +N+ + TT PF+
Sbjct: 1448 LPHIEFAYNRSLHSTTKMCPFE 1469
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 57.8 bits (138), Expect(2) = 6e-08
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 208
+PN+ + +R+ +F+SHFWR L LG+KL FST CHPQ GQT
Sbjct: 1368 VPNTIVSDRDTKFLSHFWRCLWAKLGNKLLFSTTCHPQTDGQT 1410
Score = 24.6 bits (52), Expect(2) = 6e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 137 LPSLEFEFNKMPNRTTNFSPFK 72
LP +EF +N+ + TT PF+
Sbjct: 1436 LPHIEFAYNRSLHSTTKMCPFE 1457
>ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669237, partial [Glycine
max]
Length = 1520
Score = 55.5 bits (132), Expect(2) = 6e-08
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*VKIESWET 181
+P + + +R+ +F+SHFW++L LG+KL FST CHPQ GQT V S T
Sbjct: 1371 LPRTIVSDRDAKFLSHFWKTLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLST 1422
Score = 26.9 bits (58), Expect(2) = 6e-08
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 137 LPSLEFEFNKMPNRTTNFSPFK 72
LP +EF +N+ +RTT SPF+
Sbjct: 1439 LPHVEFAYNRGVHRTTKQSPFE 1460
>ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756049, partial [Setaria
italica]
Length = 763
Score = 59.7 bits (143), Expect(2) = 8e-08
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 208
IPN+ + +R+ +F+SHFWRSL +G+KL FST CHPQ GQT
Sbjct: 612 IPNTIVSDRDAKFLSHFWRSLWNKMGTKLLFSTTCHPQTDGQT 654
Score = 22.3 bits (46), Expect(2) = 8e-08
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 137 LPSLEFEFNKMPNRTTNFSPFK 72
LP +EF +N + +T PF+
Sbjct: 680 LPHVEFAYNHATHSSTKMRPFQ 701
>ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761720, partial [Setaria
italica]
Length = 738
Score = 59.7 bits (143), Expect(2) = 8e-08
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 208
IPN+ + +R+ +F+SHFWRSL +G+KL FST CHPQ GQT
Sbjct: 587 IPNTIVSDRDAKFLSHFWRSLWNKMGTKLLFSTTCHPQTDGQT 629
Score = 22.3 bits (46), Expect(2) = 8e-08
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 137 LPSLEFEFNKMPNRTTNFSPFK 72
LP +EF +N + +T PF+
Sbjct: 655 LPHVEFAYNHATHSSTKMCPFQ 676
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 58.5 bits (140), Expect(2) = 1e-07
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 208
+PN+ + +R+ +F+SHFWR+L LG+KL FST CHPQ GQT
Sbjct: 665 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQT 707
Score = 23.1 bits (48), Expect(2) = 1e-07
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 164 QNTKN*VTSLPSLEFEFNKMPNRTTNFSPFK 72
+N K LP +EF +N + TT PF+
Sbjct: 724 KNIKMWEECLPHVEFAYNHSQHSTTKKCPFE 754
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 52.8 bits (125), Expect(2) = 2e-07
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 208
IP S + +R+ +FMSHFWR+L + L ++L FST HPQ GQT
Sbjct: 1210 IPKSIVSDRDSKFMSHFWRTLWKLLKTRLLFSTSHHPQTDGQT 1252
Score = 28.1 bits (61), Expect(2) = 2e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 173 TTCQNTKN*VTSLPSLEFEFNKMPNRTTNFSPFK 72
T ++ K+ L EF FN+ P+ TT SPF+
Sbjct: 1266 TVARSLKDWDLKLAQAEFAFNRAPSTTTGKSPFE 1299
>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
Length = 1173
Score = 48.5 bits (114), Expect(2) = 3e-07
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQ 211
IP S + +R+ +F+S FW+ L LG+KL FST CHPQ GQ
Sbjct: 916 IPRSIVSDRDVKFLSCFWKVLWGKLGTKLLFSTTCHPQTDGQ 957
Score = 31.6 bits (70), Expect(2) = 3e-07
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 164 QNTKN*VTSLPSLEFEFNKMPNRTTNFSPFK 72
+N KN LP EF +N+ + TT+FSPF+
Sbjct: 975 KNLKNWEDCLPFTEFAYNRSVHSTTSFSPFE 1005
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 56.6 bits (135), Expect(2) = 3e-07
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQ 211
+PN+ + +R+ +F+SHFWR+L LG+KL FST CHPQ GQ
Sbjct: 1303 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQ 1344
Score = 23.1 bits (48), Expect(2) = 3e-07
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 164 QNTKN*VTSLPSLEFEFNKMPNRTTNFSPFK 72
+N K LP +EF N+ + TT PF+
Sbjct: 1362 KNIKMWEECLPHIEFACNRSLHSTTKMCPFQ 1392
>emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]
Length = 1323
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 208
+P S + NR+ +FMS+FW++L LG++L FS+ HPQ GQT
Sbjct: 998 LPQSIVSNRDVKFMSYFWKTLWVKLGTQLKFSSSFHPQTDGQT 1040
Score = 30.0 bits (66), Expect(2) = 4e-07
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 137 LPSLEFEFNKMPNRTTNFSPFK 72
LP EF FN NRTT + PF+
Sbjct: 1066 LPQAEFAFNSSTNRTTGYLPFE 1087
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 57.8 bits (138), Expect(2) = 5e-07
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 15/68 (22%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*V--------------- 202
IP + + +R+ +F+SHFWR L LG+KL FST CHPQ GQT V
Sbjct: 1277 IPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKG 1336
Query: 201 KIESWETY 178
K+ SWE Y
Sbjct: 1337 KLTSWEDY 1344
Score = 21.6 bits (44), Expect(2) = 5e-07
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 137 LPSLEFEFNKMPNRTTNFSPFK 72
LP +EF +N+ + +T +PF+
Sbjct: 1345 LPIVEFAYNRTFHSSTGKTPFE 1366
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 57.8 bits (138), Expect(2) = 5e-07
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 15/68 (22%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*V--------------- 202
IP + + +R+ +F+SHFWR L LG+KL FST CHPQ GQT V
Sbjct: 1277 IPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKG 1336
Query: 201 KIESWETY 178
K+ SWE Y
Sbjct: 1337 KLTSWEDY 1344
Score = 21.6 bits (44), Expect(2) = 5e-07
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 137 LPSLEFEFNKMPNRTTNFSPFK 72
LP +EF +N+ + +T +PF+
Sbjct: 1345 LPIVEFAYNRTFHSSTGKTPFE 1366
>ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203557 [Cucumis sativus]
Length = 1406
Score = 48.5 bits (114), Expect(2) = 5e-07
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 208
IP + + +R+ +F+SHFWRSL + + L FST HPQ GQT
Sbjct: 1248 IPKTIVSDRDVKFLSHFWRSLWKKFDTNLLFSTASHPQTDGQT 1290
Score = 30.8 bits (68), Expect(2) = 5e-07
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 140 SLPSLEFEFNKMPNRTTNFSPFK 72
+LP EF FN M NR+T SPF+
Sbjct: 1315 ALPQAEFTFNHMENRSTGKSPFE 1337
>ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594328 [Solanum tuberosum]
Length = 1191
Score = 57.8 bits (138), Expect(2) = 5e-07
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 15/68 (22%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*V--------------- 202
IP + + +R+ +F+SHFWR L LG+KL FST CHPQ GQT V
Sbjct: 1059 IPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKG 1118
Query: 201 KIESWETY 178
K+ SWE Y
Sbjct: 1119 KLTSWEDY 1126
Score = 21.6 bits (44), Expect(2) = 5e-07
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 137 LPSLEFEFNKMPNRTTNFSPFK 72
LP +EF +N+ + +T +PF+
Sbjct: 1127 LPIVEFAYNRTFHSSTGKTPFE 1148
>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
Length = 1096
Score = 57.8 bits (138), Expect(2) = 5e-07
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 15/68 (22%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*V--------------- 202
IP + + +R+ +F+SHFWR L LG+KL FST CHPQ GQT V
Sbjct: 785 IPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKG 844
Query: 201 KIESWETY 178
K+ SWE Y
Sbjct: 845 KLTSWEDY 852
Score = 21.6 bits (44), Expect(2) = 5e-07
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 137 LPSLEFEFNKMPNRTTNFSPFK 72
LP +EF +N+ + +T +PF+
Sbjct: 853 LPIVEFAYNRTFHSSTGKTPFE 874
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 50.8 bits (120), Expect(2) = 6e-07
Identities = 20/43 (46%), Positives = 32/43 (74%)
Frame = -3
Query: 336 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 208
+P + + +R+ +F+S+FW++L LG++L FST CHPQ GQT
Sbjct: 1327 MPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQT 1369
Score = 28.1 bits (61), Expect(2) = 6e-07
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 164 QNTKN*VTSLPSLEFEFNKMPNRTTNFSPFK 72
+N K LP +EF +N+ + TTN PF+
Sbjct: 1386 KNLKEWEECLPHVEFAYNRAVHSTTNMCPFE 1416