BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00033996
         (283 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    90   3e-16
tpg|DAA54873.1| TPA: hypothetical protein ZEAMMB73_768916 [Zea m...    89   8e-16
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...    88   1e-15
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]      88   1e-15
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     88   1e-15
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     88   1e-15
gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus...    87   2e-15
ref|XP_002457941.1| hypothetical protein SORBIDRAFT_03g022880 [S...    87   2e-15
ref|NP_001142097.1| uncharacterized protein LOC100274261 [Zea ma...    87   2e-15
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]    87   2e-15
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]      87   2e-15
ref|XP_004974341.1| PREDICTED: probable RNA-dependent RNA polyme...    87   3e-15
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...    86   7e-15
ref|XP_004292989.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    85   9e-15
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...    84   2e-14
gb|EMT27130.1| hypothetical protein F775_09770 [Aegilops tauschii]     84   2e-14
gb|EMS46141.1| putative RNA-dependent RNA polymerase SHL2 [Triti...    84   2e-14
sp|Q8LHH9.1|SHL2_ORYSJ RecName: Full=Probable RNA-dependent RNA ...    84   2e-14
gb|EEE54718.1| hypothetical protein OsJ_02054 [Oryza sativa Japo...    84   2e-14
ref|NP_001043229.1| Os01g0527600 [Oryza sativa Japonica Group] g...    84   2e-14

>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 43/64 (67%), Positives = 50/64 (78%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
            RPH+NEASGSDLDGDLY VTWD+NLIPPSK+S   MDYAP EAK+L R    QV H   +
Sbjct: 855  RPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMDYAPAEAKQLGR----QVQHTDII 910

Query: 182  DYYS 193
            D++S
Sbjct: 911  DFFS 914


>tpg|DAA54873.1| TPA: hypothetical protein ZEAMMB73_768916 [Zea mays]
          Length = 937

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 41/65 (63%), Positives = 48/65 (73%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
            RPH NEASGSDLDGDLY VTWD+NLIPP K+S   MDY+P EAK+LPRAV+     ++  
Sbjct: 866  RPHANEASGSDLDGDLYFVTWDENLIPPGKKSWNPMDYSPAEAKQLPRAVSQHFWTMSLY 925

Query: 182  DYYSF 196
             Y  F
Sbjct: 926  GYIVF 930


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/64 (64%), Positives = 50/64 (78%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
            RPH+NEASGSDLDGDLY VTWD+NLIPPSK+S   M+Y P E K+L R    QVNH+  +
Sbjct: 854  RPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGR----QVNHMDII 909

Query: 182  DYYS 193
            D++S
Sbjct: 910  DFFS 913


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/64 (64%), Positives = 50/64 (78%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
            RPH+NEASGSDLDGDLY VTWD+NLIPPSK+S   M+Y P E K+L R    QVNH+  +
Sbjct: 854  RPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGR----QVNHMDII 909

Query: 182  DYYS 193
            D++S
Sbjct: 910  DFFS 913


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/64 (64%), Positives = 50/64 (78%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
            RPH+NEASGSDLDGDLY VTWD+NLIPPSK+S   M+Y P E K+L R    QVNH+  +
Sbjct: 854  RPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGR----QVNHMDII 909

Query: 182  DYYS 193
            D++S
Sbjct: 910  DFFS 913


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/64 (64%), Positives = 50/64 (78%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
            RPH+NEASGSDLDGDLY VTWD+NLIPPSK+S   M+Y P E K+L R    QVNH+  +
Sbjct: 854  RPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGR----QVNHMDII 909

Query: 182  DYYS 193
            D++S
Sbjct: 910  DFFS 913


>gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus guttatus]
          Length = 1196

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 40/64 (62%), Positives = 50/64 (78%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
            RPHTNEASGSDLDGDLY VTWD+NL+PPSKRS   M+YAP E K+LPR    +V H   +
Sbjct: 855  RPHTNEASGSDLDGDLYFVTWDENLMPPSKRSWTPMEYAPGEVKQLPR----EVKHTDII 910

Query: 182  DYYS 193
            ++++
Sbjct: 911  EFFT 914


>ref|XP_002457941.1| hypothetical protein SORBIDRAFT_03g022880 [Sorghum bicolor]
            gi|241929916|gb|EES03061.1| hypothetical protein
            SORBIDRAFT_03g022880 [Sorghum bicolor]
          Length = 1207

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVN 154
            RPH NEASGSDLDGDLY VTWD+NLIPP K+S   MDY+P EAK+LPRAV+
Sbjct: 866  RPHANEASGSDLDGDLYFVTWDENLIPPGKKSWNPMDYSPTEAKQLPRAVS 916


>ref|NP_001142097.1| uncharacterized protein LOC100274261 [Zea mays]
           gi|194707104|gb|ACF87636.1| unknown [Zea mays]
          Length = 552

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = +2

Query: 2   RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVN 154
           RPH NEASGSDLDGDLY VTWD+NLIPP K+S   MDY+P EAK+LPRAV+
Sbjct: 211 RPHANEASGSDLDGDLYFVTWDENLIPPGKKSWNPMDYSPAEAKQLPRAVS 261


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 40/64 (62%), Positives = 50/64 (78%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
            RPH+NEASGSDLDGDLY VTWD+N+IPPSK+S   M+Y P E K+L R    QVNH+  +
Sbjct: 854  RPHSNEASGSDLDGDLYFVTWDENIIPPSKKSWIPMNYEPAEVKQLGR----QVNHMDII 909

Query: 182  DYYS 193
            D++S
Sbjct: 910  DFFS 913


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 40/64 (62%), Positives = 50/64 (78%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
            RPH+NEASGSDLDGDLY VTWD+NLIPPSK+S   M+Y P E K++ R    QVNH+  +
Sbjct: 854  RPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQMGR----QVNHMDII 909

Query: 182  DYYS 193
            D++S
Sbjct: 910  DFFS 913


>ref|XP_004974341.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Setaria
            italica]
          Length = 1257

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 38/50 (76%), Positives = 43/50 (86%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAV 151
            RPH NEASGSDLDGD+Y VTWD NL+PP K+S P MDY+PVEAK+LPR V
Sbjct: 900  RPHPNEASGSDLDGDVYFVTWDKNLVPPRKKSWPPMDYSPVEAKQLPRRV 949


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 41/63 (65%), Positives = 48/63 (76%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
            RPH+NEASGSDLDGDLY VTWD+NLIPPSK+S   M YAP EAK+L R    QV H   +
Sbjct: 854  RPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMAYAPAEAKQLGR----QVQHTDII 909

Query: 182  DYY 190
            D++
Sbjct: 910  DFF 912


>ref|XP_004292989.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca
           subsp. vesca]
          Length = 1065

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 39/53 (73%), Positives = 43/53 (81%)
 Frame = +2

Query: 2   RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQ 160
           RPH+NEASGSDLDGDLY VTWD+NLIPPS +SE AMD+   EAK L R V NQ
Sbjct: 725 RPHSNEASGSDLDGDLYFVTWDENLIPPSMKSEEAMDFDAAEAKNLDRPVTNQ 777


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 41/64 (64%), Positives = 47/64 (73%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
            RPHTNEASGSDLDGDLY VTWD+NLIPPSKRS   M Y   EAK+L    N  VNH   +
Sbjct: 854  RPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQL----NRPVNHQDII 909

Query: 182  DYYS 193
            D+++
Sbjct: 910  DFFA 913


>gb|EMT27130.1| hypothetical protein F775_09770 [Aegilops tauschii]
          Length = 1014

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 38/50 (76%), Positives = 41/50 (82%)
 Frame = +2

Query: 2   RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAV 151
           RPH NEASGSDLDGDLY VTWD+ LIPP KRS   MDY+P EAK+LPR V
Sbjct: 668 RPHANEASGSDLDGDLYFVTWDEKLIPPGKRSWNPMDYSPAEAKQLPRKV 717


>gb|EMS46141.1| putative RNA-dependent RNA polymerase SHL2 [Triticum urartu]
          Length = 1029

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 38/50 (76%), Positives = 41/50 (82%)
 Frame = +2

Query: 2   RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAV 151
           RPH NEASGSDLDGDLY VTWD+ LIPP KRS   MDY+P EAK+LPR V
Sbjct: 683 RPHANEASGSDLDGDLYFVTWDEKLIPPGKRSWNPMDYSPAEAKQLPRKV 732


>sp|Q8LHH9.1|SHL2_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase SHL2; AltName:
            Full=Protein SHOOTLESS 2 gi|21328146|dbj|BAC00725.1|
            putative RNA-dependent RNA polymerase [Oryza sativa
            Japonica Group] gi|157279691|dbj|BAF80151.1| SHOOTLESS2
            [Oryza sativa Japonica Group]
          Length = 1218

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 43/71 (60%), Positives = 51/71 (71%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
            RPH NEASGSDLDGDLY VTWD+ LIPP K+S   MDY+P EAK+LPR    QV+    +
Sbjct: 877  RPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPR----QVSQHDII 932

Query: 182  DYYSFCANLIS 214
            D+  F  N+IS
Sbjct: 933  DF--FLKNMIS 941


>gb|EEE54718.1| hypothetical protein OsJ_02054 [Oryza sativa Japonica Group]
          Length = 1571

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 43/71 (60%), Positives = 51/71 (71%)
 Frame = +2

Query: 2    RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
            RPH NEASGSDLDGDLY VTWD+ LIPP K+S   MDY+P EAK+LPR    QV+    +
Sbjct: 1230 RPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPR----QVSQHDII 1285

Query: 182  DYYSFCANLIS 214
            D+  F  N+IS
Sbjct: 1286 DF--FLKNMIS 1294


>ref|NP_001043229.1| Os01g0527600 [Oryza sativa Japonica Group]
           gi|113532760|dbj|BAF05143.1| Os01g0527600, partial
           [Oryza sativa Japonica Group]
          Length = 385

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 43/71 (60%), Positives = 51/71 (71%)
 Frame = +2

Query: 2   RPHTNEASGSDLDGDLYLVTWDDNLIPPSKRSEPAMDYAPVEAKKLPRAVNNQVNHLTCL 181
           RPH NEASGSDLDGDLY VTWD+ LIPP K+S   MDY+P EAK+LPR    QV+    +
Sbjct: 44  RPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPR----QVSQHDII 99

Query: 182 DYYSFCANLIS 214
           D+  F  N+IS
Sbjct: 100 DF--FLKNMIS 108