BLASTX nr result

ID: Akebia24_contig00033968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00033968
         (339 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004487840.1| PREDICTED: putative E3 ubiquitin-protein lig...    57   2e-06
ref|XP_004296849.1| PREDICTED: putative E3 ubiquitin-protein lig...    55   8e-06

>ref|XP_004487840.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Cicer
           arietinum]
          Length = 1276

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/97 (36%), Positives = 55/97 (56%)
 Frame = -3

Query: 292 GWSCDDVIDEMTKQLARTYKDRLMYYQVVLYGETTQWNWGCRVAPLLDDESQCFIYGNST 113
           G S +D+ +E  K++AR YK+ L+YYQV+LYGET  W+           ES  ++  ++T
Sbjct: 183 GSSEEDINEETVKEMARRYKECLVYYQVMLYGETPWWS---------SKESTSYMDVSNT 233

Query: 112 SSEYVDSVERRNGWTKFHDGEKAHPLELQEDRIDEME 2
           S     SV+  +     +  EK HP++ Q D +D+ME
Sbjct: 234 SCVSSTSVQHESRLKTCNTYEKVHPIDPQ-DVMDKME 269


>ref|XP_004296849.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like
           [Fragaria vesca subsp. vesca]
          Length = 1331

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = -3

Query: 268 DEMTKQLARTYKDRLMYYQVVLYGETTQ-WNWGCRVAPLLDDESQCFIYGNSTSSEYVDS 92
           DE T Q+AR Y+D LMYY+V+LYGET Q    G R     D ES   ++G S   +Y + 
Sbjct: 208 DEATMQMARIYRDWLMYYKVMLYGETPQGQGGGYRDILSPDKESIYSLHGRSNRLDYSNK 267

Query: 91  V-ERRNGWTKFHDGEKAHPLELQEDRIDE 8
                N  T+++ G K HPL+  ED I E
Sbjct: 268 TGHEYNLHTQWNYG-KVHPLDPHEDSIIE 295


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