BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00033295
         (347 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_002533676.1| pentatricopeptide repeat-containing protein,...    62   6e-08

>ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 739

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
 Frame = +1

Query: 43  TILFNLHHRIPCISTVKFPSXXXXXXXXXXXXXQTICPSIITSCTDLQTLKQIHA-LFLC 219
           ++LF  HH      T  FP                   S++ SC +LQ LK+IHA L + 
Sbjct: 35  SVLFRTHHLNSHYLTCSFPYS-----------------SLLHSCNNLQALKRIHASLIVS 77

Query: 220 HGFKLISIAPKLITQYANFEDLGSALSIFKALSEPNTFLWN 342
            GF+ +S+A KLIT Y+   D  SA SI  +  EPNT +WN
Sbjct: 78  SGFQPLSVASKLITLYSQLNDFRSAFSICNSFEEPNTVIWN 118


>ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526427|gb|EEF28706.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 726

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
 Frame = +1

Query: 157 SIITSCTDLQTLKQIHA-LFLCHGFKLISIAP--KLITQYANFEDLGSALSIFKALSEPN 327
           S++ SC DL+TLKQIHA L +  GF      P  KLI+ Y+ F DL SA+S+F  L EPN
Sbjct: 33  SLLHSCKDLRTLKQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQEPN 92

Query: 328 TFLWNL 345
           T  WNL
Sbjct: 93  TLSWNL 98