BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00032012
         (349 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21038.3| unnamed protein product [Vitis vinifera]              161   8e-38
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   161   8e-38
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   147   1e-33
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   147   1e-33
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...   146   3e-33
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   144   1e-32
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   144   2e-32
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   143   2e-32
gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops...   140   2e-31
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha...   140   2e-31
ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis ...   140   2e-31
ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Caps...   139   4e-31
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun...   139   4e-31
ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutr...   138   9e-31
dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]     138   9e-31
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   137   2e-30
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   136   3e-30
gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]   135   4e-30
ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phas...   135   8e-30
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   134   1e-29

>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  161 bits (408), Expect = 8e-38
 Identities = 72/97 (74%), Positives = 83/97 (85%)
 Frame = -2

Query: 333 DCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLSDKFFE 154
           D P+  LRVRDEPDFG P+SD FFCIQ KEGI F +MFLVN  MHKGIINQHQLSDKFF+
Sbjct: 137 DSPKWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFFD 196

Query: 153 LLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           LLRS  +++N+ AL+HICSYRHPVFDAY+RLKLV +W
Sbjct: 197 LLRSQQKDINIAALKHICSYRHPVFDAYQRLKLVHKW 233


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  161 bits (408), Expect = 8e-38
 Identities = 72/97 (74%), Positives = 83/97 (85%)
 Frame = -2

Query: 333 DCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLSDKFFE 154
           D P+  LRVRDEPDFG P+SD FFCIQ KEGI F +MFLVN  MHKGIINQHQLSDKFF+
Sbjct: 299 DSPKWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFFD 358

Query: 153 LLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           LLRS  +++N+ AL+HICSYRHPVFDAY+RLKLV +W
Sbjct: 359 LLRSQQKDINIAALKHICSYRHPVFDAYQRLKLVHKW 395


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
           sinensis]
          Length = 1025

 Score =  147 bits (371), Expect = 1e-33
 Identities = 70/102 (68%), Positives = 81/102 (79%)
 Frame = -2

Query: 348 RRIPNDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLS 169
           RR+  D     + +R+EPDF  P+SD FFCI ++EGISFEIMFLVN  MHKGIINQHQLS
Sbjct: 292 RRVQVDSLSRPITIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLS 351

Query: 168 DKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           D FF+LLR  +REVNV AL+HI SY+ PVFDA KRLKLVQEW
Sbjct: 352 DSFFDLLRGQSREVNVAALKHIYSYKWPVFDACKRLKLVQEW 393


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
           sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
           sinensis]
          Length = 1197

 Score =  147 bits (371), Expect = 1e-33
 Identities = 70/102 (68%), Positives = 81/102 (79%)
 Frame = -2

Query: 348 RRIPNDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLS 169
           RR+  D     + +R+EPDF  P+SD FFCI ++EGISFEIMFLVN  MHKGIINQHQLS
Sbjct: 292 RRVQVDSLSRPITIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLS 351

Query: 168 DKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           D FF+LLR  +REVNV AL+HI SY+ PVFDA KRLKLVQEW
Sbjct: 352 DSFFDLLRGQSREVNVAALKHIYSYKWPVFDACKRLKLVQEW 393


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
           gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
           6 [Theobroma cacao]
          Length = 1197

 Score =  146 bits (369), Expect = 3e-33
 Identities = 69/102 (67%), Positives = 78/102 (76%)
 Frame = -2

Query: 348 RRIPNDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLS 169
           +R+P D  R  LR+ DEPDFG  +SD F+CI +KEGI FEIMFLVN  MHKGI NQHQLS
Sbjct: 292 QRVPMDYVRWPLRISDEPDFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFNQHQLS 351

Query: 168 DKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           + FF LLR   REVNV AL+HI SYR PVFDAYKRLK V +W
Sbjct: 352 EDFFNLLRDQPREVNVAALKHIYSYRRPVFDAYKRLKTVHDW 393


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score =  144 bits (364), Expect = 1e-32
 Identities = 64/102 (62%), Positives = 78/102 (76%)
 Frame = -2

Query: 348 RRIPNDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLS 169
           RR+  DC R  L V  EP++  P+SD FFCI  +EG+ F +MFLVN  MHKGI NQHQLS
Sbjct: 292 RRVQEDCLRRPLHVTAEPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQLS 351

Query: 168 DKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           D FF+LLR+   +VN+ ALRHICSY+HPVFDA+KRLK VQ+W
Sbjct: 352 DSFFDLLRNQPLDVNIAALRHICSYKHPVFDAHKRLKAVQQW 393


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1200

 Score =  144 bits (362), Expect = 2e-32
 Identities = 64/94 (68%), Positives = 78/94 (82%)
 Frame = -2

Query: 324 RHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLSDKFFELLR 145
           R  +R+ DEPDFG P+SD FFCI  KEGI+FE++FLVN  MHKGI NQHQLS+ FF+LLR
Sbjct: 303 RRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFDLLR 362

Query: 144 SHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           +   EVNV+AL+HIC+YR PVF+AY+RLK VQEW
Sbjct: 363 NQHTEVNVSALKHICTYRRPVFNAYRRLKAVQEW 396


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1198

 Score =  143 bits (361), Expect = 2e-32
 Identities = 64/102 (62%), Positives = 80/102 (78%)
 Frame = -2

Query: 348 RRIPNDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLS 169
           RR+  +  R  +R+RDEPDFG P++D FFCI  KEGI+F+++FLVN  MHKGI NQHQLS
Sbjct: 292 RRVQEEYLRRPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLS 351

Query: 168 DKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           + FF+LLR+   EVNV AL+HI  YR PVFDAYK+LK+ QEW
Sbjct: 352 NDFFDLLRNQPTEVNVAALKHIYPYRRPVFDAYKKLKVAQEW 393


>gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana]
          Length = 1196

 Score =  140 bits (352), Expect = 2e-31
 Identities = 61/102 (59%), Positives = 82/102 (80%)
 Frame = -2

Query: 348 RRIPNDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLS 169
           RR+  +  R   R+R+EP FG P+SD FFCI  KEGISFEIMFLVN  +H+G+ NQ QL+
Sbjct: 290 RRVQEERVRWPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLT 349

Query: 168 DKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           ++FF+LLR+  ++VN+ +L+H+C+Y+ PVFDAYKRLKLVQEW
Sbjct: 350 ERFFDLLRNQPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEW 391


>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
           gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
           Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
           AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
           Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
           Full=RNA-directed RNA polymerase 6
           gi|12324444|gb|AAG52184.1|AC012329_11 putative
           RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
           thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
           polymerase-like protein [Arabidopsis thaliana]
           gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
           gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
           6 [Arabidopsis thaliana]
          Length = 1196

 Score =  140 bits (352), Expect = 2e-31
 Identities = 61/102 (59%), Positives = 82/102 (80%)
 Frame = -2

Query: 348 RRIPNDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLS 169
           RR+  +  R   R+R+EP FG P+SD FFCI  KEGISFEIMFLVN  +H+G+ NQ QL+
Sbjct: 290 RRVQEERVRWPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLT 349

Query: 168 DKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           ++FF+LLR+  ++VN+ +L+H+C+Y+ PVFDAYKRLKLVQEW
Sbjct: 350 ERFFDLLRNQPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEW 391


>ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297323519|gb|EFH53940.1| RNA-dependent RNA polymerase
           6 [Arabidopsis lyrata subsp. lyrata]
          Length = 1197

 Score =  140 bits (352), Expect = 2e-31
 Identities = 61/102 (59%), Positives = 82/102 (80%)
 Frame = -2

Query: 348 RRIPNDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLS 169
           RR+  +  R   R+R+EP FG P+SD FFCI  KEGISFEIMFLVN  +H+G+ NQ QL+
Sbjct: 290 RRVQEERVRWPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLT 349

Query: 168 DKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           ++FF+LLR+  ++VN+ +L+H+C+Y+ PVFDAYKRLKLVQEW
Sbjct: 350 ERFFDLLRNQPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEW 391


>ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Capsella rubella]
           gi|482559225|gb|EOA23416.1| hypothetical protein
           CARUB_v10016597mg [Capsella rubella]
          Length = 1197

 Score =  139 bits (350), Expect = 4e-31
 Identities = 61/102 (59%), Positives = 81/102 (79%)
 Frame = -2

Query: 348 RRIPNDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLS 169
           RR+  +  R   R+RDEP FG P+SD FFCI  +EGISFEIMFLVN  +H+G+ NQ QL+
Sbjct: 290 RRVQEERVRWPPRIRDEPCFGEPVSDHFFCIHHREGISFEIMFLVNSVLHRGVFNQFQLT 349

Query: 168 DKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           ++FF+LLR+  ++VNV +L+H+C+Y+ PVFDAYKRLKLV EW
Sbjct: 350 ERFFDLLRNQPKDVNVASLKHLCTYKRPVFDAYKRLKLVHEW 391


>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
           gi|462422376|gb|EMJ26639.1| hypothetical protein
           PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  139 bits (350), Expect = 4e-31
 Identities = 63/102 (61%), Positives = 80/102 (78%)
 Frame = -2

Query: 348 RRIPNDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLS 169
           RR+   C +   +++DEPDFG   ++ FF IQ++EGISFEIMFLVN  MHKG +NQHQLS
Sbjct: 291 RRVKEVCIKWPPKIQDEPDFGMSNTEPFFSIQYEEGISFEIMFLVNAVMHKGTVNQHQLS 350

Query: 168 DKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           D FF LLRS  +E+NV AL+H+CSYR PVFDA +RLK+VQ+W
Sbjct: 351 DSFFHLLRSQPKEINVAALKHLCSYRSPVFDACERLKVVQDW 392


>ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutrema salsugineum]
           gi|557105252|gb|ESQ45586.1| hypothetical protein
           EUTSA_v10010107mg [Eutrema salsugineum]
          Length = 927

 Score =  138 bits (347), Expect = 9e-31
 Identities = 60/102 (58%), Positives = 81/102 (79%)
 Frame = -2

Query: 348 RRIPNDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLS 169
           +R+  +  R   R+RDEP FG  +SD FFCI  KEGISFEIMFLVN  +H+G++NQ QL+
Sbjct: 306 QRVKEERVRWPPRIRDEPGFGEAVSDHFFCIHHKEGISFEIMFLVNSVLHRGVLNQFQLT 365

Query: 168 DKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           ++FF+LLR+  ++VN+ +L+H+C+Y  PVFDAYKRLKLVQEW
Sbjct: 366 ERFFDLLRNQPKDVNIASLKHLCTYNRPVFDAYKRLKLVQEW 407


>dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]
          Length = 998

 Score =  138 bits (347), Expect = 9e-31
 Identities = 60/102 (58%), Positives = 81/102 (79%)
 Frame = -2

Query: 348 RRIPNDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLS 169
           +R+  +  R   R+RDEP FG  +SD FFCI  KEGISFEIMFLVN  +H+G++NQ QL+
Sbjct: 290 QRVKEERVRWPPRIRDEPGFGEAVSDHFFCIHHKEGISFEIMFLVNSVLHRGVLNQFQLT 349

Query: 168 DKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           ++FF+LLR+  ++VN+ +L+H+C+Y  PVFDAYKRLKLVQEW
Sbjct: 350 ERFFDLLRNQPKDVNIASLKHLCTYNRPVFDAYKRLKLVQEW 391


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca
           subsp. vesca]
          Length = 1197

 Score =  137 bits (345), Expect = 2e-30
 Identities = 59/90 (65%), Positives = 76/90 (84%)
 Frame = -2

Query: 312 RVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLSDKFFELLRSHTR 133
           R++DEP FG P+SD+ F I +++ ISF+I+FLVN  MHKGI+NQHQLS+ FF+LLR+   
Sbjct: 304 RIQDEPGFGNPMSDALFSIHYQKNISFDILFLVNAVMHKGILNQHQLSESFFDLLRNQPE 363

Query: 132 EVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           E+NV AL+H+CSY+HPVFDA KRLKLVQEW
Sbjct: 364 EINVAALKHLCSYKHPVFDASKRLKLVQEW 393


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571449461|ref|XP_006578148.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score =  136 bits (342), Expect = 3e-30
 Identities = 59/94 (62%), Positives = 79/94 (84%)
 Frame = -2

Query: 324 RHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLSDKFFELLR 145
           +  LR ++EPDFG P+SD+FF + F++ I+F+IMFLVN  +HKGI NQH+LSD+FFELLR
Sbjct: 302 KQTLRTQNEPDFGMPMSDAFFYVHFQKDIAFDIMFLVNAIVHKGIFNQHRLSDRFFELLR 361

Query: 144 SHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           +  +E+NV AL+H+CSY+ PVFDA KRLK+VQEW
Sbjct: 362 NQPKELNVAALKHLCSYKRPVFDATKRLKIVQEW 395


>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
          Length = 1195

 Score =  135 bits (341), Expect = 4e-30
 Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 2/104 (1%)
 Frame = -2

Query: 348 RRIP--NDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQ 175
           RR+P  N  P+  LRV+DEPDFG P++D FFC Q+KEG++F++MF+VN  +HKGIINQHQ
Sbjct: 290 RRVPVENGSPQERLRVQDEPDFGVPMADPFFCFQYKEGLNFKVMFMVNAVVHKGIINQHQ 349

Query: 174 LSDKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
            S +FF+LLRS   E+N+ AL+HI SY+ PV+DAY+ L  V +W
Sbjct: 350 TSKQFFDLLRSQPEELNLVALKHIYSYKRPVYDAYRALDSVTKW 393


>ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
           gi|561010117|gb|ESW09024.1| hypothetical protein
           PHAVU_009G093700g [Phaseolus vulgaris]
          Length = 1204

 Score =  135 bits (339), Expect = 8e-30
 Identities = 60/94 (63%), Positives = 78/94 (82%)
 Frame = -2

Query: 324 RHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLSDKFFELLR 145
           +  LR  +EPDFGTP+S+ FF I ++ GI+F+IMFLVN  +HKGI NQH+LSD+FFELLR
Sbjct: 302 KQTLRALNEPDFGTPMSNPFFYIDYQVGITFDIMFLVNAIVHKGIFNQHRLSDRFFELLR 361

Query: 144 SHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
           +  +E+NV AL+H+CSY+ PVFDA KRLK+VQEW
Sbjct: 362 NQPKELNVAALKHLCSYKRPVFDATKRLKVVQEW 395


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score =  134 bits (338), Expect = 1e-29
 Identities = 66/102 (64%), Positives = 79/102 (77%)
 Frame = -2

Query: 348 RRIPNDCPRHLLRVRDEPDFGTPISDSFFCIQFKEGISFEIMFLVNVAMHKGIINQHQLS 169
           RR+P +  R  LR+RDEPDFG  +SD F+ I +KEGI FEIMFLVN  +HKGI NQHQLS
Sbjct: 292 RRVPVEDLRSQLRIRDEPDFGRSMSDHFYYI-YKEGIPFEIMFLVNAVLHKGIFNQHQLS 350

Query: 168 DKFFELLRSHTREVNVTALRHICSYRHPVFDAYKRLKLVQEW 43
             FF LLR+ + EVNV AL+HI SYRHPV+DAY+RLK V +W
Sbjct: 351 MDFFRLLRNQSMEVNVAALKHIYSYRHPVYDAYERLKDVHDW 392