BLASTX nr result
ID: Akebia24_contig00031612
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00031612
(718 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphy... 318 9e-85
ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [... 311 1e-82
ref|YP_008993664.1| hypothetical chloroplast RF19 (chloroplast) ... 309 5e-82
ref|YP_008993320.1| hypothetical chloroplast RF19 (chloroplast) ... 309 7e-82
gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast)... 308 2e-81
ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [... 308 2e-81
gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein ... 306 6e-81
ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chlorop... 306 6e-81
ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chlorop... 305 8e-81
ref|YP_009026939.1| photosystem I assembly protein Ycf1 [Magnoli... 304 2e-80
ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwan... 303 4e-80
ref|YP_008993234.1| hypothetical chloroplast RF19 (chloroplast) ... 303 5e-80
ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occident... 303 5e-80
ref|YP_008993406.1| hypothetical chloroplast RF19 (chloroplast) ... 302 8e-80
ref|YP_008993836.1| hypothetical chloroplast RF19 (chloroplast) ... 301 1e-79
ref|YP_004563925.1| hypothetical chloroplast RF1 [Nelumbo lutea]... 301 1e-79
gb|AGO98581.1| hypothetical chloroplast RF19 (chloroplast) [Nelu... 300 3e-79
gb|AFH01508.1| hypothetical chloroplast RF19 (chloroplast) [Nelu... 300 3e-79
ref|YP_004564161.1| hypothetical chloroplast RF1 [Nelumbo nucife... 300 3e-79
gb|ADD30909.1| putative RF1 protein [Nelumbo nucifera] 300 3e-79
>ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphylla]
gi|182702240|sp|A6MM95.1|YCF1_BUXMI RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|146762344|gb|ABQ45308.1| hypothetical chloroplast RF1
[Buxus microphylla]
Length = 1859
Score = 318 bits (816), Expect = 9e-85
Identities = 156/230 (67%), Positives = 182/230 (79%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYE + +Y V SLPSQK LKKNYRYDLLS+ YI+YE+K+ SYI SPLQV + +I
Sbjct: 1302 LIHYETEHDYEVYSLPSQKENLKKNYRYDLLSYNYIHYENKKGSYIHVSPLQVTKGREIP 1361
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN N + PEFFYVL G+ ISDYL ED IIDT++N DRKYFDW I NFCLRKK+DIE WT+
Sbjct: 1362 YNYNIHKPEFFYVLGGIPISDYLGEDYIIDTEENPDRKYFDWIILNFCLRKKLDIEAWTD 1421
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRNH 542
+DTGD+INK TKTGTN QIIDKIDKK LFYL I+++IN Q K FDWMGMNEEI N
Sbjct: 1422 IDTGDSINKNTKTGTNNYQIIDKIDKKYLFYLTIHQEINPSNQKKNFFDWMGMNEEILNR 1481
Query: 543 PMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
+SNLELWFF EFVLLY+AYKI+PW+I IK LL NF N NV +N++I K
Sbjct: 1482 TISNLELWFFQEFVLLYNAYKIKPWVIPIKLLLLNFNRNKNVSENKNINK 1531
>ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [Trochodendron aralioides]
gi|290489080|gb|ADD30924.1| putative RF1 protein
[Trochodendron aralioides] gi|479279354|gb|AGJ72207.1|
hypothetical chloroplast RF1 (chloroplast) [Trochodendron
aralioides]
Length = 1896
Score = 311 bits (797), Expect = 1e-82
Identities = 148/230 (64%), Positives = 179/230 (77%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYEK+ +Y DSL ++K LKKNYRYDLLS+KYINYE K+DS I+ SP QVN+ +IS
Sbjct: 1331 LIHYEKQNDYEGDSLLNKKENLKKNYRYDLLSYKYINYEDKKDSSIYRSPFQVNKGQEIS 1390
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN NT+ PEFFY+L G+ ISDYL ED II+ KN +RKYFDWRI +FCLRKK+DI WTN
Sbjct: 1391 YNYNTHKPEFFYMLGGILISDYLGEDYIIERKKNPNRKYFDWRILHFCLRKKVDIRAWTN 1450
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRNH 542
+DTG N+N+ TK GTNY QIIDKID KD F L I+++IN + T FDWM MNEEI N
Sbjct: 1451 IDTGANVNRNTKAGTNYYQIIDKIDHKDTFSLMIHQEINPSNKKTTFFDWMRMNEEILNR 1510
Query: 543 PMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
P+SNLELWF PEFVLLY+AYKI+PW+I IK L FNF GN N N+++ +
Sbjct: 1511 PISNLELWFLPEFVLLYNAYKIKPWVIPIKLLFFNFNGNKNFNGNKNVSE 1560
>ref|YP_008993664.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia odora]
Length = 1852
Score = 309 bits (792), Expect = 5e-82
Identities = 153/231 (66%), Positives = 180/231 (77%), Gaps = 1/231 (0%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYEK+ NY V+SLPSQK K KK+YRYDLLSHKYI+YE ++DSYI+GSP QVN +I
Sbjct: 1305 LIHYEKQNNYVVNSLPSQKEKFKKHYRYDLLSHKYIHYEDRKDSYIYGSPFQVNGDREIP 1364
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN N PE FYV G+AI+DYL E SIIDT KN DRKY +WRI NF LRK IDIE WT+
Sbjct: 1365 YNYNMPKPESFYVPGGIAINDYLGEGSIIDTGKNPDRKYLEWRILNFFLRKNIDIETWTD 1424
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKT-SFDWMGMNEEIRN 539
+DTG NINK TKTGTN QI IDKKDLFYL I+++IN Q KT FDWMGMNEE+ +
Sbjct: 1425 IDTGTNINKNTKTGTNDYQI---IDKKDLFYLTIHQEINPSNQKKTFFFDWMGMNEEMLH 1481
Query: 540 HPMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
P+SNLE WFF EFVLLYDAYKI+PW+I IK L+FN GN N+ +N++I +
Sbjct: 1482 RPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLNGNENISENKNINR 1532
>ref|YP_008993320.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia dealbata]
Length = 1846
Score = 309 bits (791), Expect = 7e-82
Identities = 153/231 (66%), Positives = 180/231 (77%), Gaps = 1/231 (0%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYEK+ NY V+SLPSQK K KK+YRYDLLSHKYI+YE ++DSYI+GSP QVN +I
Sbjct: 1299 LIHYEKQNNYVVNSLPSQKDKFKKHYRYDLLSHKYIHYEDRKDSYIYGSPFQVNGDREIP 1358
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN N PE FYV G+AI+DYL E SIIDT KN DRKY +WRI NF LRK IDIE WT+
Sbjct: 1359 YNYNMPKPESFYVPGGIAINDYLGEGSIIDTGKNPDRKYLEWRILNFFLRKNIDIETWTD 1418
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKT-SFDWMGMNEEIRN 539
+DTG NINK TKTGTN QI IDKKDLFYL I+++IN Q KT FDWMGMNEE+ +
Sbjct: 1419 IDTGTNINKNTKTGTNDYQI---IDKKDLFYLTIHQEINPSNQKKTFFFDWMGMNEEMLH 1475
Query: 540 HPMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
P+SNLE WFF EFVLLYDAYKI+PW+I IK L+FN GN N+ +N++I +
Sbjct: 1476 RPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLNGNENISENKNINR 1526
>gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
officinalis subsp. biloba]
Length = 1863
Score = 308 bits (788), Expect = 2e-81
Identities = 150/230 (65%), Positives = 179/230 (77%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYEK+ +Y V+SLPSQK K KK+YRYDLLSHKYI+YE ++DSYI+GSP QVN +I
Sbjct: 1317 LIHYEKQNSYVVNSLPSQKEKFKKHYRYDLLSHKYIHYEDRKDSYIYGSPFQVNGDREIP 1376
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN N PE FYV G+AI+DYL E SIIDT KN DRKY +WRI NF LRK IDIE WT+
Sbjct: 1377 YNYNMPKPESFYVPGGIAINDYLGEGSIIDTGKNPDRKYLEWRILNFFLRKNIDIEIWTD 1436
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRNH 542
+DTG NINK TKTGTN QI IDKKDLFYL I+++IN + K FDWMGMNEE+ +
Sbjct: 1437 IDTGTNINKNTKTGTNDYQI---IDKKDLFYLTIHQEINPSNKKKVFFDWMGMNEEMLHR 1493
Query: 543 PMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
P+SNLE WFF EFVLLYDAYKI+PW+I IK L+FN GN N+ +N++I +
Sbjct: 1494 PISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLNGNENISENKNINR 1543
>ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia officinalis]
gi|372862476|gb|AEX98557.1| hypothetical chloroplast RF1
(chloroplast) [Magnolia officinalis]
Length = 1863
Score = 308 bits (788), Expect = 2e-81
Identities = 150/230 (65%), Positives = 179/230 (77%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYEK+ +Y V+SLPSQK K KK+YRYDLLSHKYI+YE ++DSYI+GSP QVN +I
Sbjct: 1317 LIHYEKQNSYVVNSLPSQKEKFKKHYRYDLLSHKYIHYEDRKDSYIYGSPFQVNGDREIP 1376
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN N PE FYV G+AI+DYL E SIIDT KN DRKY +WRI NF LRK IDIE WT+
Sbjct: 1377 YNYNMPKPESFYVPGGIAINDYLGEGSIIDTGKNPDRKYLEWRILNFFLRKNIDIEIWTD 1436
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRNH 542
+DTG NINK TKTGTN QI IDKKDLFYL I+++IN + K FDWMGMNEE+ +
Sbjct: 1437 IDTGTNINKNTKTGTNDYQI---IDKKDLFYLTIHQEINPSNKKKVFFDWMGMNEEMLHR 1493
Query: 543 PMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
P+SNLE WFF EFVLLYDAYKI+PW+I IK L+FN GN N+ +N++I +
Sbjct: 1494 PISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLNGNENISENKNINR 1543
>gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein (chloroplast)
[Magnolia officinalis subsp. biloba]
Length = 1863
Score = 306 bits (783), Expect = 6e-81
Identities = 149/230 (64%), Positives = 179/230 (77%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYEK+ +Y V+SLPSQK K KK+YRYDLLSHKYI+YE ++DSYI+GSP QVN +I
Sbjct: 1317 LIHYEKQNSYVVNSLPSQKEKFKKHYRYDLLSHKYIHYEDRKDSYIYGSPFQVNGDREIP 1376
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN N PE FYV G+AI+DYL E SIIDT KN DRKY +WRI NF LRK IDIE WT+
Sbjct: 1377 YNYNMPKPESFYVPGGIAINDYLGEGSIIDTGKNPDRKYLEWRILNFFLRKNIDIEIWTD 1436
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRNH 542
+DTG NINK TKTGTN QI IDKKDLFYL I+++IN + + FDWMGMNEE+ +
Sbjct: 1437 IDTGTNINKNTKTGTNDYQI---IDKKDLFYLTIHQEINPSNKKRFFFDWMGMNEEMLHR 1493
Query: 543 PMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
P+SNLE WFF EFVLLYDAYKI+PW+I IK L+FN GN N+ +N++I +
Sbjct: 1494 PISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLNGNENISENKNINR 1543
>ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
officinalis subsp. biloba] gi|372862561|gb|AEX98641.1|
photosystem I assembly protein Ycf1 (chloroplast)
[Magnolia officinalis subsp. biloba]
Length = 1863
Score = 306 bits (783), Expect = 6e-81
Identities = 149/230 (64%), Positives = 179/230 (77%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYEK+ +Y V+SLPSQK K KK+YRYDLLSHKYI+YE ++DSYI+GSP QVN +I
Sbjct: 1317 LIHYEKQNSYVVNSLPSQKEKFKKHYRYDLLSHKYIHYEDRKDSYIYGSPFQVNGDREIP 1376
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN N PE FYV G+AI+DYL E SIIDT KN DRKY +WRI NF LRK IDIE WT+
Sbjct: 1377 YNYNMPKPESFYVPGGIAINDYLGEGSIIDTGKNPDRKYLEWRILNFFLRKNIDIEIWTD 1436
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRNH 542
+DTG NINK TKTGTN QI IDKKDLFYL I+++IN + + FDWMGMNEE+ +
Sbjct: 1437 IDTGTNINKNTKTGTNDYQI---IDKKDLFYLTIHQEINPSNKKRFFFDWMGMNEEMLHR 1493
Query: 543 PMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
P+SNLE WFF EFVLLYDAYKI+PW+I IK L+FN GN N+ +N++I +
Sbjct: 1494 PISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLNGNENISENKNINR 1543
>ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
grandiflora] gi|372862899|gb|AEX98975.1| photosystem I
assembly protein Ycf1 (chloroplast) [Magnolia
grandiflora]
Length = 1843
Score = 305 bits (782), Expect = 8e-81
Identities = 148/230 (64%), Positives = 179/230 (77%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYEK+ NY V+SLPSQK K KK+YRYDLLSHKYI+YE ++DSYI+GSP QVN +I
Sbjct: 1297 LIHYEKQNNYVVNSLPSQKEKFKKHYRYDLLSHKYIHYEDRKDSYIYGSPFQVNGDREIP 1356
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN N PE FYV +G+AI+DYL E SIIDT K+ DRKY +WRI NF LRK IDIE WT+
Sbjct: 1357 YNYNMPKPESFYVPEGIAINDYLGEGSIIDTGKSPDRKYLEWRILNFFLRKNIDIETWTD 1416
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRNH 542
+DTG NINK TKTGTN QI IDKKDLFYL I+++IN + + DWMGMNEE+ +
Sbjct: 1417 IDTGTNINKNTKTGTNDYQI---IDKKDLFYLTIHQEINPSNKKRFFLDWMGMNEEMLHR 1473
Query: 543 PMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
P+SNLE WFF EFVLLYDAYKI+PW+I IK L+FN GN N+ +N++I +
Sbjct: 1474 PISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLNGNENISENKNINR 1523
>ref|YP_009026939.1| photosystem I assembly protein Ycf1 [Magnolia tripetala]
gi|608608461|gb|AHW52015.1| photosystem I assembly
protein Ycf1 [Magnolia tripetala]
Length = 1846
Score = 304 bits (779), Expect = 2e-80
Identities = 151/231 (65%), Positives = 179/231 (77%), Gaps = 1/231 (0%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYEK+ +Y V+SLPSQK K KK+YRYDLLSHKYI+YE ++DSYI+GSP QVN +I
Sbjct: 1299 LIHYEKQNSYVVNSLPSQKEKFKKHYRYDLLSHKYIHYEDRKDSYIYGSPFQVNGDREIP 1358
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN N PE FYV G+AI+DYL E SIIDT KN DRKY +WRI NF LRK IDIE WT+
Sbjct: 1359 YNYNMPKPESFYVPGGIAINDYLGEGSIIDTGKNPDRKYLEWRILNFFLRKNIDIEIWTD 1418
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKT-SFDWMGMNEEIRN 539
+DTG NINK TKTGTN QI IDKKDLFYL I+++IN Q K FDWMGMNEE+ +
Sbjct: 1419 IDTGTNINKNTKTGTNDYQI---IDKKDLFYLTIHQEINPSNQKKRFFFDWMGMNEEMLH 1475
Query: 540 HPMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
P+SNLE WFF EFVLLYDAYKI+PW+I IK L+FN GN N+ +N++I +
Sbjct: 1476 RPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLNGNENISENKNINR 1526
>ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwangsiensis]
gi|302424237|gb|ADL39113.1| hypothetical chloroplast RF19
[Magnolia kwangsiensis]
Length = 1838
Score = 303 bits (776), Expect = 4e-80
Identities = 149/230 (64%), Positives = 180/230 (78%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYEK+ NY V+SLPSQK K KK+YRYDLLSHKYI+YE ++DSYI+GSP QVN +I
Sbjct: 1293 LIHYEKQNNYVVNSLPSQKEKFKKHYRYDLLSHKYIHYEDRKDSYIYGSPFQVNGDREIP 1352
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN N PE FYV G+AI+DYL E SIIDT KN DRKY +WRI NF LRK IDIE WT+
Sbjct: 1353 YNYNMPKPESFYVPGGIAINDYLGEGSIIDTGKNPDRKYLEWRILNFFLRKNIDIETWTD 1412
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRNH 542
+DTG +INK TKTGTN QI IDKKDLFYL I+++IN ++ + FDWMGMNEE+ +
Sbjct: 1413 IDTGTDINKNTKTGTNDYQI---IDKKDLFYLTIHQEINPSKK-RFFFDWMGMNEEMLHR 1468
Query: 543 PMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
P+SNLE WFF EFVLLYDAYKI+PW+I IK L+FN GN N+ +N++I +
Sbjct: 1469 PISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLNGNENISENKNINR 1518
>ref|YP_008993234.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia cathcartii]
Length = 1837
Score = 303 bits (775), Expect = 5e-80
Identities = 151/231 (65%), Positives = 179/231 (77%), Gaps = 1/231 (0%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYEK+ NY V+SLPS+K K KK+YRYDLLSHKYI+YE ++DSYI+GSP QVN +I
Sbjct: 1290 LIHYEKQNNYVVNSLPSKKEKFKKHYRYDLLSHKYIHYEDRKDSYIYGSPFQVNGDREIP 1349
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN N PE FYV G+AI+DYL E SIIDT KN DRKY + RI NF LRK IDIE WT+
Sbjct: 1350 YNYNMPKPESFYVPGGIAINDYLGEGSIIDTGKNPDRKYLECRILNFFLRKNIDIETWTD 1409
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKT-SFDWMGMNEEIRN 539
+DTG NINK TKTGTN QI IDKKDLFYL I+++IN Q KT FDWMGMNEE+ +
Sbjct: 1410 IDTGTNINKNTKTGTNDYQI---IDKKDLFYLTIHQEINPSNQKKTFFFDWMGMNEEMLH 1466
Query: 540 HPMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
P+SNLE WFF EFVLLYDAYKI+PW+I IK L+FN GN N+ +N++I +
Sbjct: 1467 RPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLNGNENISENKNINR 1517
>ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occidentalis]
gi|118574761|sp|Q09FY8.1|YCF1_PLAOC RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|114054443|gb|ABI49837.1| hypothetical chloroplast RF1
[Platanus occidentalis]
Length = 1915
Score = 303 bits (775), Expect = 5e-80
Identities = 147/230 (63%), Positives = 181/230 (78%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHY+K+ +YAV+ L ++K KLKK+Y YDLLSHKYINYE+K+D YI+ SPLQVNE +I+
Sbjct: 1344 LIHYQKQNDYAVELLSNKKEKLKKHYGYDLLSHKYINYENKKDLYIYRSPLQVNEGREIT 1403
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN T+ E F VL G+ I DYL ED II+TDKN DRKYFDW I +FCLRK++DI+ WTN
Sbjct: 1404 YNYTTHKLESFCVLGGIPIRDYLGEDYIIETDKNPDRKYFDWGILHFCLRKEVDIDTWTN 1463
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRNH 542
MDT +INKKTKTGTNYSQI++KI+KKDLF I+++IN Q K FDWMGMNEEI N
Sbjct: 1464 MDTEASINKKTKTGTNYSQIVEKINKKDLF--MIHEEINPSNQKKKPFDWMGMNEEILNR 1521
Query: 543 PMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
+SNLELWF PEF+LLYD YK++PW I IK LL N GN NV +N++I +
Sbjct: 1522 TISNLELWFVPEFLLLYDTYKMKPWGIPIKLLLVNLNGNENVSENKNINR 1571
>ref|YP_008993406.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia pyramidata]
Length = 1858
Score = 302 bits (773), Expect = 8e-80
Identities = 150/231 (64%), Positives = 178/231 (77%), Gaps = 1/231 (0%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYEK+ NY V+SLPSQK K KK+YRY LLSHKYI+YE ++DSYI+GSP QVN +I
Sbjct: 1311 LIHYEKQNNYVVNSLPSQKEKFKKHYRYYLLSHKYIHYEDRKDSYIYGSPFQVNGDREIP 1370
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN N P+ FYV G+AI+DYL E SIIDT KN DRKYF+WRI NF LRK ID E WT+
Sbjct: 1371 YNYNMPKPKSFYVPGGIAINDYLGEGSIIDTGKNPDRKYFEWRILNFFLRKNIDSETWTD 1430
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKT-SFDWMGMNEEIRN 539
+DTG NINK TKTGTN QI IDKKDLFYL I+++IN Q K FDWMGMNEE+ +
Sbjct: 1431 IDTGTNINKNTKTGTNDYQI---IDKKDLFYLTIHQEINPSNQKKRFFFDWMGMNEEMLH 1487
Query: 540 HPMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
P+SNLE WFF EFVLLYDAYKI+PW+I IK L+FN GN N+ +N++I +
Sbjct: 1488 RPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLNGNENISENKNINR 1538
>ref|YP_008993836.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia sinica]
Length = 1841
Score = 301 bits (772), Expect = 1e-79
Identities = 151/226 (66%), Positives = 173/226 (76%), Gaps = 1/226 (0%)
Frame = +3
Query: 3 LIHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDIS 182
LIHYEK+ NY V+SLPSQK K KK+YRYDL SHKYI+YE ++DSYI+GSP QVN +I
Sbjct: 1296 LIHYEKQNNYVVNSLPSQKEKFKKHYRYDLFSHKYIHYEDRKDSYIYGSPFQVNGDREIP 1355
Query: 183 YNCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCLRKKIDIEDWTN 362
YN N PE FYV G+AI+DYL E SIIDT KN DRKY +WRI NF LRK IDIE WT+
Sbjct: 1356 YNYNMPKPESFYVPGGIAINDYLGEGSIIDTGKNPDRKYLEWRILNFFLRKNIDIETWTD 1415
Query: 363 MDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKT-SFDWMGMNEEIRN 539
+DTG NINK TKTGTN QI IDKKDLFYL I+++IN Q K FDWMGMNEE+ +
Sbjct: 1416 IDTGTNINKNTKTGTNDYQI---IDKKDLFYLTIHQEINPSNQKKRFFFDWMGMNEEMLH 1472
Query: 540 HPMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKN 677
P+SNLE WFF EFVLLYDAYKI+PW+I IK L+FN GN N KN
Sbjct: 1473 RPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLNGNENENKN 1518
>ref|YP_004563925.1| hypothetical chloroplast RF1 [Nelumbo lutea]
gi|224474194|gb|ACN49383.1| hypothetical chloroplast RF1
[Nelumbo lutea]
Length = 1839
Score = 301 bits (771), Expect = 1e-79
Identities = 152/231 (65%), Positives = 176/231 (76%), Gaps = 2/231 (0%)
Frame = +3
Query: 6 IHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDISY 185
I YEK+ +Y ++SLP+QK K KK+YRYDLLSHKYINYE K+DSYI+ SPLQVNE + Y
Sbjct: 1274 IFYEKQNDYTLNSLPNQKDKFKKHYRYDLLSHKYINYEDKKDSYIYESPLQVNEGPGLPY 1333
Query: 186 NCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCL--RKKIDIEDWT 359
N NT+ PE F VL + ISDYL ED IIDT KN DRKY DWRI +FCL RKKIDIE W
Sbjct: 1334 NYNTHKPEPFDVLRDLPISDYLVEDYIIDTKKNLDRKYLDWRILHFCLKNRKKIDIEVWA 1393
Query: 360 NMDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRN 539
NMDTG NINKKTKTGTN Q IDK KKDLFYL I+++IN + K FDWMGMNEEI N
Sbjct: 1394 NMDTGANINKKTKTGTNDYQKIDKFYKKDLFYLTIHQEINPSNKKKNLFDWMGMNEEILN 1453
Query: 540 HPMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
+SNLELWFFPE +LLYD YKI+PW I IK LL N+ N NV +N++I +
Sbjct: 1454 RSISNLELWFFPELLLLYDTYKIKPWGIPIKLLLLNWNRNENVSENKNINE 1504
>gb|AGO98581.1| hypothetical chloroplast RF19 (chloroplast) [Nelumbo nucifera]
Length = 1520
Score = 300 bits (768), Expect = 3e-79
Identities = 151/231 (65%), Positives = 176/231 (76%), Gaps = 2/231 (0%)
Frame = +3
Query: 6 IHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDISY 185
+ YEK+ +Y ++SLP+QK K KK+YRYDLLSHKYINYE K+DSYI+ SPLQVNE + Y
Sbjct: 955 LFYEKQNDYTLNSLPNQKDKFKKHYRYDLLSHKYINYEDKKDSYIYESPLQVNEGPGLPY 1014
Query: 186 NCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCL--RKKIDIEDWT 359
N NT+ PE F VL + ISDYL ED IIDT KN DRKYFDWRI +FCL RKKIDIE W
Sbjct: 1015 NYNTHKPEPFDVLRDLPISDYLGEDYIIDTKKNLDRKYFDWRILHFCLKNRKKIDIEVWA 1074
Query: 360 NMDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRN 539
NMDTG NINKKTKTGTN Q IDK KKDLFYL I+++IN + K FDWMGMNEEI N
Sbjct: 1075 NMDTGANINKKTKTGTNDYQKIDKFYKKDLFYLTIHQEINPSNKKKNLFDWMGMNEEILN 1134
Query: 540 HPMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
+SNLELWFF E +LLYD YKI+PW I IK LL N+ N NV +N++I +
Sbjct: 1135 RSISNLELWFFSELLLLYDTYKIKPWGIPIKLLLLNWNRNENVSENKNINE 1185
>gb|AFH01508.1| hypothetical chloroplast RF19 (chloroplast) [Nelumbo nucifera]
Length = 1839
Score = 300 bits (768), Expect = 3e-79
Identities = 151/231 (65%), Positives = 176/231 (76%), Gaps = 2/231 (0%)
Frame = +3
Query: 6 IHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDISY 185
+ YEK+ +Y ++SLP+QK K KK+YRYDLLSHKYINYE K+DSYI+ SPLQVNE + Y
Sbjct: 1274 LFYEKQNDYTLNSLPNQKDKFKKHYRYDLLSHKYINYEDKKDSYIYESPLQVNEGPGLPY 1333
Query: 186 NCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCL--RKKIDIEDWT 359
N NT+ PE F VL + ISDYL ED IIDT KN DRKYFDWRI +FCL RKKIDIE W
Sbjct: 1334 NYNTHKPEPFDVLRDLPISDYLGEDYIIDTKKNLDRKYFDWRILHFCLKNRKKIDIEVWA 1393
Query: 360 NMDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRN 539
NMDTG NINKKTKTGTN Q IDK KKDLFYL I+++IN + K FDWMGMNEEI N
Sbjct: 1394 NMDTGANINKKTKTGTNDYQKIDKFYKKDLFYLTIHQEINPSNKKKNLFDWMGMNEEILN 1453
Query: 540 HPMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
+SNLELWFF E +LLYD YKI+PW I IK LL N+ N NV +N++I +
Sbjct: 1454 RSISNLELWFFSELLLLYDTYKIKPWGIPIKLLLLNWNRNENVSENKNINE 1504
>ref|YP_004564161.1| hypothetical chloroplast RF1 [Nelumbo nucifera]
gi|224474281|gb|ACN49467.1| hypothetical chloroplast RF1
[Nelumbo nucifera]
Length = 1839
Score = 300 bits (768), Expect = 3e-79
Identities = 151/231 (65%), Positives = 176/231 (76%), Gaps = 2/231 (0%)
Frame = +3
Query: 6 IHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDISY 185
+ YEK+ +Y ++SLP+QK K KK+YRYDLLSHKYINYE K+DSYI+ SPLQVNE + Y
Sbjct: 1274 LFYEKQNDYTLNSLPNQKDKFKKHYRYDLLSHKYINYEDKKDSYIYESPLQVNEGPGLPY 1333
Query: 186 NCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCL--RKKIDIEDWT 359
N NT+ PE F VL + ISDYL ED IIDT KN DRKYFDWRI +FCL RKKIDIE W
Sbjct: 1334 NYNTHKPEPFDVLRDLPISDYLGEDYIIDTKKNLDRKYFDWRILHFCLKNRKKIDIEVWA 1393
Query: 360 NMDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRN 539
NMDTG NINKKTKTGTN Q IDK KKDLFYL I+++IN + K FDWMGMNEEI N
Sbjct: 1394 NMDTGANINKKTKTGTNDYQKIDKFYKKDLFYLTIHQEINPSNKKKNLFDWMGMNEEILN 1453
Query: 540 HPMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
+SNLELWFF E +LLYD YKI+PW I IK LL N+ N NV +N++I +
Sbjct: 1454 RSISNLELWFFSELLLLYDTYKIKPWGIPIKLLLLNWNRNENVSENKNINE 1504
>gb|ADD30909.1| putative RF1 protein [Nelumbo nucifera]
Length = 1839
Score = 300 bits (768), Expect = 3e-79
Identities = 151/231 (65%), Positives = 176/231 (76%), Gaps = 2/231 (0%)
Frame = +3
Query: 6 IHYEKKKNYAVDSLPSQKAKLKKNYRYDLLSHKYINYEHKRDSYIFGSPLQVNEVLDISY 185
+ YEK+ +Y ++SLP+QK K KK+YRYDLLSHKYINYE K+DSYI+ SPLQVNE + Y
Sbjct: 1274 LFYEKQNDYTLNSLPNQKDKFKKHYRYDLLSHKYINYEDKKDSYIYESPLQVNEGPGLPY 1333
Query: 186 NCNTYNPEFFYVLDGVAISDYLREDSIIDTDKNTDRKYFDWRIFNFCL--RKKIDIEDWT 359
N NT+ PE F VL + ISDYL ED IIDT KN DRKYFDWRI +FCL RKKIDIE W
Sbjct: 1334 NYNTHKPEPFDVLRDLPISDYLGEDYIIDTKKNLDRKYFDWRILHFCLKNRKKIDIEVWA 1393
Query: 360 NMDTGDNINKKTKTGTNYSQIIDKIDKKDLFYLAINKQINSFRQTKTSFDWMGMNEEIRN 539
NMDTG NINKKTKTGTN Q IDK KKDLFYL I+++IN + K FDWMGMNEEI N
Sbjct: 1394 NMDTGANINKKTKTGTNDYQKIDKFYKKDLFYLTIHQEINPSNKKKNLFDWMGMNEEILN 1453
Query: 540 HPMSNLELWFFPEFVLLYDAYKIQPWLILIKSLLFNFIGNANVIKNEDIKK 692
+SNLELWFF E +LLYD YKI+PW I IK LL N+ N NV +N++I +
Sbjct: 1454 RSISNLELWFFSELLLLYDTYKIKPWGIPIKLLLLNWNRNENVSENKNINE 1504