BLASTX nr result
ID: Akebia24_contig00031191
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00031191
(433 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007032766.1| Gag protease polyprotein [Theobroma cacao] g... 116 6e-25
ref|XP_007049935.1| Gag protease polyprotein [Theobroma cacao] g... 115 1e-24
emb|CAN71472.1| hypothetical protein VITISV_040055 [Vitis vinifera] 115 5e-24
ref|XP_007050046.1| DNA/RNA polymerases superfamily protein [The... 111 1e-23
gb|EXC31837.1| Transposon Ty3-I Gag-Pol polyprotein [Morus notab... 113 2e-23
emb|CAN64875.1| hypothetical protein VITISV_019676 [Vitis vinifera] 112 4e-23
gb|ABB47119.1| retrotransposon protein, putative, Ty3-gypsy subc... 110 2e-22
gb|ABA97433.1| retrotransposon protein, putative, Ty3-gypsy subc... 110 2e-22
gb|AAM01143.1|AC108884_25 Putative retroelement [Oryza sativa Ja... 110 2e-22
emb|CAN68536.1| hypothetical protein VITISV_018260 [Vitis vinifera] 110 2e-22
emb|CAH66104.1| OSIGBa0101K10.3 [Oryza sativa Indica Group] 110 2e-22
gb|AAM74397.1|AC119149_12 Putative retroelement [Oryza sativa Ja... 110 2e-22
gb|AAD27547.1|AF111709_1 polyprotein [Oryza sativa Indica Group] 110 3e-22
emb|CAH66141.1| H0616A11.5 [Oryza sativa Indica Group] 110 3e-22
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo] 110 3e-22
ref|XP_007022613.1| Uncharacterized protein TCM_033423 [Theobrom... 109 3e-22
gb|AAK92588.1|AC074354_22 Putative retroelement [Oryza sativa Ja... 109 3e-22
gb|AAL86492.1|AC077693_31 putative polyprotein [Oryza sativa Jap... 109 3e-22
emb|CAH67814.1| OSIGBa0138H21-OSIGBa0138E01.5 [Oryza sativa Indi... 109 3e-22
emb|CAH66117.1| OSIGBa0146N20.2 [Oryza sativa Indica Group] 109 3e-22
>ref|XP_007032766.1| Gag protease polyprotein [Theobroma cacao]
gi|508711795|gb|EOY03692.1| Gag protease polyprotein
[Theobroma cacao]
Length = 689
Score = 116 bits (290), Expect(2) = 6e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQS LV E K +H +MDF+ GLPRT +G + IWVIVDRLTK AHFL
Sbjct: 457 VKAEHQRPAGTLQSLLVPELKWEHVTMDFVLGLPRTQRGKDAIWVIVDRLTKSAHFLAVH 516
Query: 199 E*TL*SKNH*ISCSEIVNF-----VILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 363
K + EIV I+ D+D RFTS+FW A GT LKFS A HPQ
Sbjct: 517 STYSIEKLAQLYIDEIVRLHGVPVFIVSDQDPRFTSRFWPKFQEALGTKLKFSTAFHPQT 576
Query: 364 DGQYE 378
DGQ E
Sbjct: 577 DGQSE 581
Score = 23.5 bits (49), Expect(2) = 6e-25
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 371 NMRASCALDFTGSGS*HFPL 430
+M +C +DF GS H PL
Sbjct: 589 DMLRACVIDFIGSWDRHLPL 608
>ref|XP_007049935.1| Gag protease polyprotein [Theobroma cacao]
gi|508702196|gb|EOX94092.1| Gag protease polyprotein
[Theobroma cacao]
Length = 269
Score = 115 bits (287), Expect(2) = 1e-24
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQS V E K +H +MDF+ GLPRT +G++ IWVIVDRLTK AHFL
Sbjct: 48 VKAEHQRPAGTLQSLPVPEWKWEHVTMDFVLGLPRTQRGNDAIWVIVDRLTKSAHFLAVH 107
Query: 199 E*TL*SKNH*ISCSEIVNF-----VILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 363
K + EIV I+ DRD RFTS+FW A GT LKFS A HPQ
Sbjct: 108 STYSIEKLAQLYIDEIVRLHGVPVSIVSDRDPRFTSRFWLKFQEALGTKLKFSTAFHPQT 167
Query: 364 DGQYE 378
DGQ E
Sbjct: 168 DGQSE 172
Score = 23.5 bits (49), Expect(2) = 1e-24
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 371 NMRASCALDFTGSGS*HFPL 430
+M +C +DF GS H PL
Sbjct: 180 DMLRACVIDFIGSWDRHLPL 199
>emb|CAN71472.1| hypothetical protein VITISV_040055 [Vitis vinifera]
Length = 374
Score = 115 bits (289), Expect = 5e-24
Identities = 67/128 (52%), Positives = 78/128 (60%), Gaps = 5/128 (3%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQ + E K +H +MDF+ GLPRT G+N IWVIVDRLTK AHFL
Sbjct: 18 VKAEHQRPAGSLQPLAIPEWKWEHITMDFVIGLPRTLGGNNAIWVIVDRLTKSAHFLPMK 77
Query: 199 E*TL*SKNH*ISCSEIVNF-----VILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 363
+ + EIV I+ DRD RFTS+FW SL A GT L FS A HPQ
Sbjct: 78 VNFSLDRLASLYVKEIVRMHGVPVSIVSDRDPRFTSRFWHSLQKALGTKLSFSTAFHPQT 137
Query: 364 DGQYESIM 387
DGQ E ++
Sbjct: 138 DGQSEMVI 145
>ref|XP_007050046.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508702307|gb|EOX94203.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1336
Score = 111 bits (278), Expect(2) = 1e-23
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQS V E K +H +MDF+ GL RT +G +VIWVIVD+LTK AHFL
Sbjct: 1053 VKAEHQRPAGTLQSLPVPEWKWEHVTMDFVLGLSRTQRGKDVIWVIVDQLTKSAHFLAVH 1112
Query: 199 E*TL*SKNH*ISCSEIVNF-----VILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 363
K + EIV I+ DRD RFTS+FW A GT LKFS A HPQ
Sbjct: 1113 STYSIEKLAQLYIDEIVRLHGVPVSIVSDRDPRFTSRFWPKFQEALGTKLKFSTAFHPQT 1172
Query: 364 DGQYE 378
DGQ E
Sbjct: 1173 DGQSE 1177
Score = 23.5 bits (49), Expect(2) = 1e-23
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 371 NMRASCALDFTGSGS*HFPL 430
+M +C +DF GS H PL
Sbjct: 1185 DMLRACVIDFIGSWDRHLPL 1204
>gb|EXC31837.1| Transposon Ty3-I Gag-Pol polyprotein [Morus notabilis]
Length = 1088
Score = 113 bits (283), Expect = 2e-23
Identities = 60/128 (46%), Positives = 83/128 (64%), Gaps = 5/128 (3%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK +HQRP+G+LQ + + K DH +MDF++GLPRT +G++ +WV+VDRLTK AHF+
Sbjct: 871 VKADHQRPSGELQPLPIPDWKWDHVTMDFVTGLPRTQEGYDAVWVVVDRLTKTAHFIPIR 930
Query: 199 E*TL*SKNH*ISCSEIVNF-----VILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 363
K + IV I+ DRD++FTS+FW+ L NA GT L+FS A HPQ
Sbjct: 931 ADYKVPKLCRLYIERIVTLHGVPVSIVSDRDAQFTSKFWKGLQNALGTELRFSTAFHPQT 990
Query: 364 DGQYESIM 387
DGQ E ++
Sbjct: 991 DGQSERVI 998
>emb|CAN64875.1| hypothetical protein VITISV_019676 [Vitis vinifera]
Length = 386
Score = 112 bits (281), Expect = 4e-23
Identities = 65/128 (50%), Positives = 76/128 (59%), Gaps = 5/128 (3%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRP G LQ + E K +H +MDF+ GLPRT G+N IWVIVDRLTK AHFL
Sbjct: 18 VKVEHQRPVGSLQPLAIPEWKWEHITMDFVIGLPRTLGGNNAIWVIVDRLTKSAHFLPMK 77
Query: 199 E*TL*SKNH*ISCSEIVNF-----VILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 363
+ + EIV I+ DRD FTS+FW SL A GT L FS A HPQ
Sbjct: 78 VNFSLDRLASLHVKEIVRMHGVPVSIVSDRDPHFTSRFWHSLQKALGTKLSFSTAFHPQT 137
Query: 364 DGQYESIM 387
DGQ E ++
Sbjct: 138 DGQSERVI 145
>gb|ABB47119.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1522
Score = 110 bits (275), Expect = 2e-22
Identities = 68/151 (45%), Positives = 84/151 (55%), Gaps = 16/151 (10%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQ + E K + MDF++GLPRT GH++IWV+VDRLTK+AHF+ +
Sbjct: 1140 VKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDLIWVVVDRLTKVAHFIP-V 1198
Query: 199 E*TL*SKN------H*ISCSEIVNFVILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQ 360
T K I C V I+ DR S+FTS+FWQ L GT L FS A HPQ
Sbjct: 1199 HTTYTGKRLAELYLSRIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSTAYHPQ 1258
Query: 361 MDGQYESI----------MCFRFHGQWELTL 423
DGQ E + F G W+ +L
Sbjct: 1259 TDGQTERVNQILEDMLRACALDFGGAWDKSL 1289
>gb|ABA97433.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1672
Score = 110 bits (275), Expect = 2e-22
Identities = 68/151 (45%), Positives = 84/151 (55%), Gaps = 16/151 (10%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQ ++E K + MDF++GLPRT GH+ IWV+VDRLTK+AHF+ +
Sbjct: 1290 VKAEHQRPAGLLQPLQILEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP-V 1348
Query: 199 E*TL*SKN------H*ISCSEIVNFVILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQ 360
T K I C V I+ DR S+FTS+FWQ L GT L FS A HPQ
Sbjct: 1349 HTTYTGKRLAELYLSRIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSTAYHPQ 1408
Query: 361 MDGQYESI----------MCFRFHGQWELTL 423
DGQ E + F G W+ +L
Sbjct: 1409 TDGQTERVNQILEDMLRACALDFGGAWDKSL 1439
>gb|AAM01143.1|AC108884_25 Putative retroelement [Oryza sativa Japonica Group]
gi|21263216|gb|AAM44893.1|AC122144_16 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431896|gb|AAP53608.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1245
Score = 110 bits (275), Expect = 2e-22
Identities = 65/128 (50%), Positives = 78/128 (60%), Gaps = 6/128 (4%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQ + E K + MDF++GLPRT GH+ IWV+VDRLTK+AHF+ +
Sbjct: 932 VKVEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP-V 990
Query: 199 E*TL*SKN------H*ISCSEIVNFVILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQ 360
T SK I C V I+ DR S+FTS+FWQ L GT L FS A HPQ
Sbjct: 991 HTTYTSKRLAELYLSRIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSTAYHPQ 1050
Query: 361 MDGQYESI 384
DGQ E +
Sbjct: 1051 TDGQTERV 1058
>emb|CAN68536.1| hypothetical protein VITISV_018260 [Vitis vinifera]
Length = 749
Score = 110 bits (275), Expect = 2e-22
Identities = 66/136 (48%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRP G LQ + E K DH +MDF+ GLPRT N +WVIVDRLTKLAHFL
Sbjct: 396 VKAEHQRPTGLLQPLPIPEWKWDHITMDFVIGLPRTSSKKNQVWVIVDRLTKLAHFLAMK 455
Query: 199 E*TL*SKNH*ISCSEIVN-----FVILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 363
+ + EIV I+ DRD +FTSQFWQSL A T L FSIA HPQ+
Sbjct: 456 TTNSMNSLAKLYIQEIVRLNGIPLSIVSDRDPKFTSQFWQSLQRALSTQLNFSIAFHPQI 515
Query: 364 DGQYESIMCFRFHGQW 411
D F W
Sbjct: 516 DEDMLRACVLDFEENW 531
>emb|CAH66104.1| OSIGBa0101K10.3 [Oryza sativa Indica Group]
Length = 1521
Score = 110 bits (275), Expect = 2e-22
Identities = 68/151 (45%), Positives = 85/151 (56%), Gaps = 16/151 (10%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQ + + E K + MDF++GLPRT GH+ IWV+VDRLTK+AHF+ +
Sbjct: 1139 VKAEHQRPAGLLQPFQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP-V 1197
Query: 199 E*TL*SKN------H*ISCSEIVNFVILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQ 360
T K I C V I+ DR S+FTS+FWQ L GT L FS A HPQ
Sbjct: 1198 HTTYTGKRLAELYLARIMCLHGVPKRIVSDRGSQFTSKFWQKLQEELGTRLNFSTAYHPQ 1257
Query: 361 MDGQYESI----------MCFRFHGQWELTL 423
+DGQ E + F G W+ +L
Sbjct: 1258 IDGQTERVNQILEDMLRACALDFGGAWDKSL 1288
>gb|AAM74397.1|AC119149_12 Putative retroelement [Oryza sativa Japonica Group]
Length = 1512
Score = 110 bits (275), Expect = 2e-22
Identities = 68/151 (45%), Positives = 84/151 (55%), Gaps = 16/151 (10%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQ + E K + MDF++GLPRT GH++IWV+VDRLTK+AHF+ +
Sbjct: 1130 VKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDLIWVVVDRLTKVAHFIP-V 1188
Query: 199 E*TL*SKN------H*ISCSEIVNFVILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQ 360
T K I C V I+ DR S+FTS+FWQ L GT L FS A HPQ
Sbjct: 1189 HTTYTGKRLAELYLSRIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSTAYHPQ 1248
Query: 361 MDGQYESI----------MCFRFHGQWELTL 423
DGQ E + F G W+ +L
Sbjct: 1249 TDGQTERVNQILEDMLRACALDFGGAWDKSL 1279
>gb|AAD27547.1|AF111709_1 polyprotein [Oryza sativa Indica Group]
Length = 1521
Score = 110 bits (274), Expect = 3e-22
Identities = 68/151 (45%), Positives = 84/151 (55%), Gaps = 16/151 (10%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQ + E K + MDF++GLPRT GH+ IWV+VDRLTK+AHF+ +
Sbjct: 1139 VKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP-V 1197
Query: 199 E*TL*SKN------H*ISCSEIVNFVILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQ 360
+ T K I C V I+ DR S+FTS+FWQ L GT L FS A HPQ
Sbjct: 1198 QTTYTGKRLAELYLARIMCLHGVPRKIVSDRGSQFTSKFWQKLQEEMGTRLNFSTAYHPQ 1257
Query: 361 MDGQYESI----------MCFRFHGQWELTL 423
DGQ E + F G W+ +L
Sbjct: 1258 TDGQTERVNQILEDMLRACALDFGGAWDKSL 1288
>emb|CAH66141.1| H0616A11.5 [Oryza sativa Indica Group]
Length = 1421
Score = 110 bits (274), Expect = 3e-22
Identities = 68/151 (45%), Positives = 84/151 (55%), Gaps = 16/151 (10%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQ + E K + MDF++GLPRT GH+ IWV+VDRLTK+AHF+ +
Sbjct: 1117 VKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP-V 1175
Query: 199 E*TL*SKN------H*ISCSEIVNFVILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQ 360
T K I C V I+ DR S+FTS+FWQ L GT L FS+A HPQ
Sbjct: 1176 HTTYTGKRLAELYLSRIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSMAYHPQ 1235
Query: 361 MDGQYESI----------MCFRFHGQWELTL 423
DGQ E + F G W+ +L
Sbjct: 1236 TDGQTERVNQILEDMLRACALDFGGAWDKSL 1266
>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
Length = 923
Score = 110 bits (274), Expect = 3e-22
Identities = 68/152 (44%), Positives = 85/152 (55%), Gaps = 15/152 (9%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK Q+PAG LQ + E K ++ SMDF++GLPRT +G VIWV+VDRLTK AHF+
Sbjct: 551 VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGK 610
Query: 199 E*TL*SKNH*ISCSEIVNF-----VILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 363
SK + SEIV I+ DRD+RFTS+FW+ L A GT L FS A HPQ
Sbjct: 611 STYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 670
Query: 364 DGQYESI----------MCFRFHGQWELTLSI 429
DGQ E + F G W+ L +
Sbjct: 671 DGQTERLNQVLEDMLRACALEFPGSWDSHLHL 702
>ref|XP_007022613.1| Uncharacterized protein TCM_033423 [Theobroma cacao]
gi|508722241|gb|EOY14138.1| Uncharacterized protein
TCM_033423 [Theobroma cacao]
Length = 809
Score = 109 bits (273), Expect = 3e-22
Identities = 62/125 (49%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
+K EHQ+P+G LQ L+ E K +H +MDF+ GLPRT G + IWVIVDRLTK AHFL
Sbjct: 653 IKAEHQKPSGTLQPLLIPEWKWEHVTMDFVLGLPRTQSGKDAIWVIVDRLTKSAHFLAIH 712
Query: 199 E*TL*SKNH*ISCSEIVNF-----VILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQM 363
+ + EIV I+ DRD RFTS+FW A GT L+FS A HPQ
Sbjct: 713 STYSIERLARLYIDEIVRLHGVPVSIVSDRDPRFTSRFWPKFHEALGTKLRFSTAFHPQT 772
Query: 364 DGQYE 378
DGQ E
Sbjct: 773 DGQSE 777
>gb|AAK92588.1|AC074354_22 Putative retroelement [Oryza sativa Japonica Group]
gi|19881702|gb|AAM01103.1|AC098682_7 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431123|gb|AAP52945.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1777
Score = 109 bits (273), Expect = 3e-22
Identities = 68/151 (45%), Positives = 83/151 (54%), Gaps = 16/151 (10%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQ + E K + MDF++GLPRT GH+ IWV+VDRLTK+AHF+ +
Sbjct: 1395 VKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP-V 1453
Query: 199 E*TL*SKN------H*ISCSEIVNFVILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQ 360
T K I C V I+ DR S+FTS+FWQ L GT L FS A HPQ
Sbjct: 1454 HTTYTGKRLAELYLSRIMCLHGVPKKIVSDRGSQFTSKFWQKLQEEMGTRLNFSTAYHPQ 1513
Query: 361 MDGQYESI----------MCFRFHGQWELTL 423
DGQ E + F G W+ +L
Sbjct: 1514 TDGQTERVNQILEDMLRACALDFGGAWDKSL 1544
>gb|AAL86492.1|AC077693_31 putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 109 bits (273), Expect = 3e-22
Identities = 68/151 (45%), Positives = 83/151 (54%), Gaps = 16/151 (10%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQ + E K + MDF++GLPRT GH+ IWV+VDRLTK+AHF+ +
Sbjct: 1142 VKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP-V 1200
Query: 199 E*TL*SKN------H*ISCSEIVNFVILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQ 360
T K I C V I+ DR S+FTS+FWQ L GT L FS A HPQ
Sbjct: 1201 HTTYSGKKLAELYLARIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSTAYHPQ 1260
Query: 361 MDGQYESI----------MCFRFHGQWELTL 423
DGQ E + F G W+ +L
Sbjct: 1261 TDGQTERVNQILEDMLRACALNFGGAWDKSL 1291
>emb|CAH67814.1| OSIGBa0138H21-OSIGBa0138E01.5 [Oryza sativa Indica Group]
Length = 1777
Score = 109 bits (273), Expect = 3e-22
Identities = 68/151 (45%), Positives = 83/151 (54%), Gaps = 16/151 (10%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQ + E K + MDF++GLPRT GH+ IWV+VDRLTK+AHF+ +
Sbjct: 1395 VKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP-V 1453
Query: 199 E*TL*SKN------H*ISCSEIVNFVILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQ 360
T K I C V I+ DR S+FTS+FWQ L GT L FS A HPQ
Sbjct: 1454 HTTYTGKRLAELYLSRIMCLHGVPKKIVSDRGSQFTSKFWQKLQEEMGTRLNFSTAYHPQ 1513
Query: 361 MDGQYESI----------MCFRFHGQWELTL 423
DGQ E + F G W+ +L
Sbjct: 1514 TDGQTERVNQILEDMLRACALDFGGAWDKSL 1544
>emb|CAH66117.1| OSIGBa0146N20.2 [Oryza sativa Indica Group]
Length = 1521
Score = 109 bits (273), Expect = 3e-22
Identities = 68/151 (45%), Positives = 84/151 (55%), Gaps = 16/151 (10%)
Frame = +1
Query: 19 VKTEHQRPAGKLQSWLVVE*K*DHASMDFMSGLPRT*QGHNVIWVIVDRLTKLAHFLEYL 198
VK EHQRPAG LQ + E K + MDF++GLPRT GH+ IWV+VDRLTK+AHF+ +
Sbjct: 1139 VKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP-V 1197
Query: 199 E*TL*SKN------H*ISCSEIVNFVILLDRDSRFTSQFWQSL*NASGTLLKFSIALHPQ 360
T K I C V I+ DR S+FTS+FWQ L GT L FS+A HPQ
Sbjct: 1198 HTTYTGKRLAELYLARIMCLHGVPRKIVSDRGSQFTSKFWQKLQEELGTRLNFSMAYHPQ 1257
Query: 361 MDGQYESI----------MCFRFHGQWELTL 423
DGQ E + F G W+ +L
Sbjct: 1258 TDGQTERVNQILEDMLRACALDFGGAWDKSL 1288