BLASTX nr result
ID: Akebia24_contig00027907
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00027907
(653 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containi... 249 4e-64
ref|XP_007198997.1| hypothetical protein PRUPE_ppa002025mg [Prun... 247 3e-63
gb|EXB24037.1| hypothetical protein L484_006069 [Morus notabilis] 239 4e-61
ref|XP_004290750.1| PREDICTED: pentatricopeptide repeat-containi... 239 5e-61
ref|XP_007041747.1| Tetratricopeptide repeat (TPR)-like superfam... 239 7e-61
ref|XP_006486706.1| PREDICTED: pentatricopeptide repeat-containi... 235 1e-59
ref|XP_006422555.1| hypothetical protein CICLE_v10030410mg [Citr... 235 1e-59
ref|XP_002306200.1| hypothetical protein POPTR_0004s18470g [Popu... 228 1e-57
ref|XP_006283134.1| hypothetical protein CARUB_v10004161mg [Caps... 212 7e-53
ref|NP_195239.1| pentatricopeptide repeat-containing protein [Ar... 208 1e-51
ref|XP_002867090.1| pentatricopeptide repeat-containing protein ... 207 2e-51
gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indi... 201 2e-49
gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sat... 201 2e-49
ref|XP_006412144.1| hypothetical protein EUTSA_v10024444mg [Eutr... 198 1e-48
ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containi... 193 4e-47
dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare] 193 4e-47
ref|XP_002465903.1| hypothetical protein SORBIDRAFT_01g047870 [S... 193 4e-47
gb|ABE77204.1| unknown [Sorghum bicolor] 193 4e-47
ref|XP_006649360.1| PREDICTED: pentatricopeptide repeat-containi... 192 8e-47
ref|XP_004985793.1| PREDICTED: pentatricopeptide repeat-containi... 191 1e-46
>ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product
[Vitis vinifera]
Length = 802
Score = 249 bits (637), Expect = 4e-64
Identities = 126/217 (58%), Positives = 160/217 (73%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
+R LE D MVQTSL+DMY+KCG +++A RLFD ++ +SIVAWNA+IGGY LN ++
Sbjct: 254 MRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESF 313
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+ V MQE K+ D IT++NLLP CAQL + LGKS+HGFA+R L HLVLET+LVDM
Sbjct: 314 AYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDM 373
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YG+CG K AE +F +M RNLISWNAM+A+Y +NG N +A+ LF DL ++ PDA T
Sbjct: 374 YGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDL-CNKTLKPDATT 432
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
+A+ILPAYAELASLRE QIH Y KL +NT +SN
Sbjct: 433 IASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSN 469
Score = 135 bits (341), Expect = 8e-30
Identities = 72/215 (33%), Positives = 125/215 (58%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ GL+ D + SLI MY+K G +E A +F M R +V+WN++I GYV +++
Sbjct: 153 IKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSL 212
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
SC MQ + + D +++ +L AC+ L GK IH +R +L ++++TSLVDM
Sbjct: 213 SCFREMQASG-IKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDM 271
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y KCG AER+F+++ +++++WNAM+ Y+ N + E+ + G +PD IT
Sbjct: 272 YAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWIT 331
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
+ +LP A+L ++ G +H + I+ F+ + ++
Sbjct: 332 MINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVL 366
Score = 119 bits (297), Expect = 1e-24
Identities = 67/212 (31%), Positives = 122/212 (57%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR G +++T+L+DMY +CG ++ A LF M+ R++++WNA+I Y N KA+
Sbjct: 356 IRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAM 415
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+ ++ + D TI ++LPA A+L L + IHG+ + +L S+ + S+V M
Sbjct: 416 TLFQDLCNKT-LKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFM 474
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YGKCG+ A +F+RM +++ISWN ++ AYA +G+ ++ LF ++ + P+ T
Sbjct: 475 YGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEM-REKGFEPNGST 533
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTN 638
++L + + + EG + + ++K D+ N
Sbjct: 534 FVSLLLSCSVAGLVNEGWE-YFNSMKRDYNIN 564
Score = 89.7 bits (221), Expect = 7e-16
Identities = 61/202 (30%), Positives = 99/202 (49%)
Frame = +3
Query: 15 LESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVI 194
+E + + T + Y + G ++ A+ LF+ M WN +I G+V N AV
Sbjct: 56 VERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYH 115
Query: 195 NMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKC 374
M E + D T ++ AC L DL+ G+ +HG ++ L + + SL+ MY K
Sbjct: 116 RM-EFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKI 174
Query: 375 GDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATI 554
G +SAE VF M R+L+SWN+M++ Y G +L+ F ++ D ++ I
Sbjct: 175 GCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQ-ASGIKLDRFSVIGI 233
Query: 555 LPAYAELASLREGMQIHCYTIK 620
L A + LR G +IHC ++
Sbjct: 234 LGACSLEGFLRNGKEIHCQMMR 255
>ref|XP_007198997.1| hypothetical protein PRUPE_ppa002025mg [Prunus persica]
gi|462394397|gb|EMJ00196.1| hypothetical protein
PRUPE_ppa002025mg [Prunus persica]
Length = 727
Score = 247 bits (630), Expect = 3e-63
Identities = 117/217 (53%), Positives = 164/217 (75%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
++C LE D MVQTSLIDMY KCG V+++ RLF +S+R++V WNA+I GY LN P +++
Sbjct: 179 LKCMLELDIMVQTSLIDMYHKCGRVDYSERLFHEISTRNVVVWNAMIHGYTLNARPFESL 238
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
SC+ MQ DK++ D IT++NLLP+C Q+ L GKS+HG+AVRR L H++LET+L+D+
Sbjct: 239 SCLQKMQHADKLNPDAITMINLLPSCTQVGALLEGKSVHGYAVRRGFLPHIILETALIDL 298
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YG CG KSAER+F ++ +NLISWN+M++AY Q+G N +AL LF DL + + PDAIT
Sbjct: 299 YGACGRMKSAERIFGQLAEKNLISWNSMISAYVQSGQNKDALELFWDL-LSKHLEPDAIT 357
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
+++I+PAY+E+ASL E Q+H Y KL+ +NT ISN
Sbjct: 358 ISSIIPAYSEVASLGERKQMHGYISKLEHNSNTFISN 394
Score = 142 bits (359), Expect = 7e-32
Identities = 74/214 (34%), Positives = 123/214 (57%)
Frame = +3
Query: 6 RCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVS 185
+ GL+SD V +L +Y+K G +E+A R+F+ M + +V+WN++IGGYV ++
Sbjct: 79 KVGLDSDVYVGNALCAVYAKLGCIEYAERVFEEMPVKDMVSWNSMIGGYVSVGDGWSSLV 138
Query: 186 CVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMY 365
C+ MQ M D + + L ACA L GK IH ++ L ++++TSL+DMY
Sbjct: 139 CLKEMQVLG-MKPDRFSTIGALNACAIECFLQTGKEIHCQVLKCMLELDIMVQTSLIDMY 197
Query: 366 GKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITL 545
KCG +ER+F+ + RN++ WNAM+ Y N E+L+ + + NPDAIT+
Sbjct: 198 HKCGRVDYSERLFHEISTRNVVVWNAMIHGYTLNARPFESLSCLQKMQHADKLNPDAITM 257
Query: 546 ATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
+LP+ ++ +L EG +H Y ++ F+ + I+
Sbjct: 258 INLLPSCTQVGALLEGKSVHGYAVRRGFLPHIIL 291
Score = 111 bits (277), Expect = 2e-22
Identities = 58/208 (27%), Positives = 122/208 (58%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
+R G +++T+LID+Y CG ++ A R+F ++ +++++WN++I YV + A+
Sbjct: 281 VRRGFLPHIILETALIDLYGACGRMKSAERIFGQLAEKNLISWNSMISAYVQSGQNKDAL 340
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
++ + ++ D ITI +++PA +++ L K +HG+ + + S+ + + M
Sbjct: 341 ELFWDLL-SKHLEPDAITISSIIPAYSEVASLGERKQMHGYISKLEHNSNTFISNATAYM 399
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y KCG+ ++A+ +F+RM R++ SWN ++ AYA +G+ ++++LF + E P+ T
Sbjct: 400 YAKCGNLETAQEIFDRMISRDVSSWNTIIMAYAIHGFGTKSIDLFSKM-RDEGIQPNEST 458
Query: 543 LATILPAYAELASLREGMQIHCYTIKLD 626
++L A + + EG + + ++KLD
Sbjct: 459 FVSLLTACSVSGMVNEGWK-YFNSMKLD 485
Score = 76.3 bits (186), Expect = 8e-12
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
Frame = +3
Query: 75 VEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQETDKMDTDMITIVNLLP 254
+E A+ +F+ M+ WN +I G N +A+ MQ ++ + D T ++
Sbjct: 1 MEDALWVFEKMNHLDTYYWNVMIRGLTDNGLFREAIDFYHRMQ-SEAVRADNFTYPFVIK 59
Query: 255 ACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKSAERVFNRMGGRNLIS 434
AC L L+ G+ +HG + L S + + +L +Y K G + AERVF M ++++S
Sbjct: 60 ACGGLSSLAEGQKVHGKLFKVGLDSDVYVGNALCAVYAKLGCIEYAERVFEEMPVKDMVS 119
Query: 435 WNAMVAAYAQ--NGWNPEALNLFHDLVIGESRNPDAITLATILPAYAELASLREGMQIHC 608
WN+M+ Y +GW+ + L V+G PD + L A A L+ G +IHC
Sbjct: 120 WNSMIGGYVSVGDGWS-SLVCLKEMQVLG--MKPDRFSTIGALNACAIECFLQTGKEIHC 176
Query: 609 YTIK----LDFVTNT 641
+K LD + T
Sbjct: 177 QVLKCMLELDIMVQT 191
>gb|EXB24037.1| hypothetical protein L484_006069 [Morus notabilis]
Length = 797
Score = 239 bits (611), Expect = 4e-61
Identities = 115/217 (52%), Positives = 161/217 (74%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
++CG E D MVQTSL+DMYSKCG V++A RLF +S ++IV WNA++GG+VLN+ P K+
Sbjct: 247 LKCGFELDLMVQTSLLDMYSKCGRVDYAERLFREISQKTIVVWNAMMGGFVLNSQPQKSF 306
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+C+ MQE D + D I+I+N LP+CAQ GKS HG+A+R+ L H+VLETSL+D+
Sbjct: 307 ACLKKMQEDDNLSPDAISIINFLPSCAQFGAFLDGKSSHGYAIRKGFLPHVVLETSLIDL 366
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YG G PK AE +F +M ++L++W++M++AY QN N EALNLF +L+I + PDAIT
Sbjct: 367 YGAFGKPKLAEYIFGQMEEKSLVTWSSMISAYVQNEQNEEALNLFLELLI-KPLQPDAIT 425
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
LA++LPAY+E+A+L+EG QIH Y K + +NT I N
Sbjct: 426 LASVLPAYSEVATLKEGKQIHGYISKSEHRSNTYILN 462
Score = 130 bits (328), Expect = 3e-28
Identities = 66/214 (30%), Positives = 118/214 (55%)
Frame = +3
Query: 6 RCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVS 185
+ GL SD V SL+ MY K G ++ A LFD M R +V+WN+L+G YV +++
Sbjct: 147 KVGLNSDVCVCNSLVSMYGKSGFIKLAGELFDEMPVRDLVSWNSLVGAYVAVGDGRNSLA 206
Query: 186 CVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMY 365
C+++MQ M D +++++ L AC+ + GK +H ++ L+++TSL+DMY
Sbjct: 207 CLLDMQAFG-MTPDRVSMISALKACSIECFIRSGKEVHCQVLKCGFELDLMVQTSLLDMY 265
Query: 366 GKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITL 545
KCG AER+F + + ++ WNAM+ + N ++ + ++ +PDAI++
Sbjct: 266 SKCGRVDYAERLFREISQKTIVVWNAMMGGFVLNSQPQKSFACLKKMQEDDNLSPDAISI 325
Query: 546 ATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
LP+ A+ + +G H Y I+ F+ + ++
Sbjct: 326 INFLPSCAQFGAFLDGKSSHGYAIRKGFLPHVVL 359
Score = 115 bits (288), Expect = 1e-23
Identities = 62/201 (30%), Positives = 115/201 (57%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR G +++TSLID+Y G + A +F M +S+V W+++I YV N +A+
Sbjct: 349 IRKGFLPHVVLETSLIDLYGAFGKPKLAEYIFGQMEEKSLVTWSSMISAYVQNEQNEEAL 408
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+ + + + D IT+ ++LPA +++ L GK IHG+ + + S+ + SLV M
Sbjct: 409 NLFLELL-IKPLQPDAITLASVLPAYSEVATLKEGKQIHGYISKSEHRSNTYILNSLVYM 467
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y KCG+P++A +F+R+ R++ SWN ++ AYA +G+ +++ LF ++ E P+ IT
Sbjct: 468 YAKCGEPETARAIFDRILFRDVSSWNTIIMAYAIHGFGRKSIELF-SMMRDEGIRPNYIT 526
Query: 543 LATILPAYAELASLREGMQIH 605
++L + + + E + +
Sbjct: 527 FVSLLTSCSTSGMVDEAWRFY 547
Score = 87.0 bits (214), Expect = 5e-15
Identities = 54/193 (27%), Positives = 92/193 (47%)
Frame = +3
Query: 69 GTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQETDKMDTDMITIVNL 248
G + A+ +F+ M WN +I G+ N +A++ M E + D T + +
Sbjct: 67 GQMREALEIFEKMDCSETYVWNLMIRGFTDNGLFFEAINFYRRM-ENQGIQADNFTYLFV 125
Query: 249 LPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKSAERVFNRMGGRNL 428
+ AC G+ +HG + L S + + SLV MYGK G K A +F+ M R+L
Sbjct: 126 IKACGASLSFFEGQKVHGKLFKVGLNSDVCVCNSLVSMYGKSGFIKLAGELFDEMPVRDL 185
Query: 429 ISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYAELASLREGMQIHC 608
+SWN++V AY G +L D+ PD +++ + L A + +R G ++HC
Sbjct: 186 VSWNSLVGAYVAVGDGRNSLACLLDMQ-AFGMTPDRVSMISALKACSIECFIRSGKEVHC 244
Query: 609 YTIKLDFVTNTII 647
+K F + ++
Sbjct: 245 QVLKCGFELDLMV 257
>ref|XP_004290750.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 803
Score = 239 bits (610), Expect = 5e-61
Identities = 114/217 (52%), Positives = 160/217 (73%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
++C +ESD MVQTSLIDMY KCG V++A RLFD +S +++V WN +I GY LN P++A
Sbjct: 255 MKCMVESDVMVQTSLIDMYHKCGRVDYAERLFDKISQKNVVVWNVMIHGYALNACPVEAF 314
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
SC+ MQETDK+ D IT++N+L +C Q+ L GKSIH +A+R + H+VLET+L+++
Sbjct: 315 SCLKMMQETDKLKPDAITMINVLLSCTQVGALMEGKSIHVYAIRHWFIPHIVLETALIEL 374
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YG C K AER+FN++ +N+ISWN M++AY NGWN EAL LF DLV + NPD+IT
Sbjct: 375 YGACSRVKLAERIFNQLAQKNMISWNTMISAYVHNGWNWEALELFQDLV-SKPLNPDSIT 433
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
+++ILPA++E+AS+ + QIH Y KL+ +NT I N
Sbjct: 434 ISSILPAFSEVASIGQRKQIHGYISKLEHRSNTFILN 470
Score = 129 bits (323), Expect = 1e-27
Identities = 70/214 (32%), Positives = 119/214 (55%)
Frame = +3
Query: 6 RCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVS 185
+ GL SD + +L +Y+K G + A ++F+ M + +V+WN++IGGYV V
Sbjct: 155 KVGLVSDVYICNALCAVYAKLGCIGDAEKVFEEMPVKDLVSWNSMIGGYVAVGDGWSGVI 214
Query: 186 CVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMY 365
C +M M D +++ +L ACA L GK IH ++ + S ++++TSL+DMY
Sbjct: 215 CFRDMIVVGIMP-DRFSMIGVLNACAIEGLLQTGKEIHCQVMKCMVESDVMVQTSLIDMY 273
Query: 366 GKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITL 545
KCG AER+F+++ +N++ WN M+ YA N EA + + + PDAIT+
Sbjct: 274 HKCGRVDYAERLFDKISQKNVVVWNVMIHGYALNACPVEAFSCLKMMQETDKLKPDAITM 333
Query: 546 ATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
+L + ++ +L EG IH Y I+ F+ + ++
Sbjct: 334 INVLLSCTQVGALMEGKSIHVYAIRHWFIPHIVL 367
Score = 115 bits (287), Expect = 2e-23
Identities = 61/200 (30%), Positives = 120/200 (60%)
Frame = +3
Query: 30 MVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQET 209
+++T+LI++Y C V+ A R+F+ ++ +++++WN +I YV N +A+ ++ +
Sbjct: 366 VLETALIELYGACSRVKLAERIFNQLAQKNMISWNTMISAYVHNGWNWEALELFQDLV-S 424
Query: 210 DKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKS 389
++ D ITI ++LPA +++ + K IHG+ + + S+ + S V MY KCG +
Sbjct: 425 KPLNPDSITISSILPAFSEVASIGQRKQIHGYISKLEHRSNTFILNSTVYMYAKCGHLGT 484
Query: 390 AERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYA 569
A+ +F+RM R++ SWN ++ AYA +G+ + LF ++V GE P+A T ++L A +
Sbjct: 485 AQEIFDRMIYRDVSSWNTIIMAYAIHGFGRSSTRLFCEMV-GEGIQPNASTFVSLLTACS 543
Query: 570 ELASLREGMQIHCYTIKLDF 629
+ EG + + ++KL++
Sbjct: 544 VSGMVDEGWKYYA-SMKLEY 562
Score = 82.4 bits (202), Expect = 1e-13
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Frame = +3
Query: 27 PMVQTSLIDMYS-----------KCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPM 173
PM T++ D +S + G++E A+ +FD M+ WN +I G+V N
Sbjct: 50 PMKPTTMADQHSSSLKQALHDHVQSGSMEDALWVFDKMNKLDAYNWNIVIRGFVDNGMFR 109
Query: 174 KAVSCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSL 353
+A+ M E + + D T ++ AC L + +HG + L+S + + +L
Sbjct: 110 EAIEFYQRM-EMEGVKEDNYTYPFVIKACGGSLSLVEVRRVHGKLFKVGLVSDVYICNAL 168
Query: 354 VDMYGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPD 533
+Y K G AE+VF M ++L+SWN+M+ Y G + F D+++ PD
Sbjct: 169 CAVYAKLGCIGDAEKVFEEMPVKDLVSWNSMIGGYVAVGDGWSGVICFRDMIV-VGIMPD 227
Query: 534 AITLATILPAYAELASLREGMQIHCYTIK 620
++ +L A A L+ G +IHC +K
Sbjct: 228 RFSMIGVLNACAIEGLLQTGKEIHCQVMK 256
>ref|XP_007041747.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508705682|gb|EOX97578.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 810
Score = 239 bits (609), Expect = 7e-61
Identities = 123/217 (56%), Positives = 159/217 (73%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR G E D MV+TSLIDMY KCG+V++A R F+ + ++IVAWNA+I YV N ++
Sbjct: 260 IRGGFEMDLMVETSLIDMYGKCGSVDYAEREFNRIVHKNIVAWNAMIAAYVSNACFHESF 319
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
SCV MQE K+ D IT++NLLP+CAQ+ + +GKSIH A+R+ +L HLVLET+LVDM
Sbjct: 320 SCVKEMQEVFKLRPDAITMINLLPSCAQMGAVLVGKSIHASAIRKGILPHLVLETALVDM 379
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YG+CG K AE VF ++ G+NL SWNAM+AAY QNG EAL LF ++ ES PDAIT
Sbjct: 380 YGRCGKLKLAEHVFVQINGKNLASWNAMLAAYVQNGQYTEALELFQNIWY-ESLQPDAIT 438
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
+A++LPAYA+L SL EG QIH + IKL +NTI+SN
Sbjct: 439 IASVLPAYADLTSLSEGRQIHAFIIKLGLNSNTIVSN 475
Score = 126 bits (317), Expect = 5e-27
Identities = 72/217 (33%), Positives = 118/217 (54%), Gaps = 2/217 (0%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
++ GL+ D SLI MY K G VE +F M+ R +V+WN+L+ GY +
Sbjct: 159 VKVGLDLDVYNCNSLISMYMKVGCVELGQNVFREMAVRDLVSWNSLLSGY---QQVGDGL 215
Query: 183 SCVINMQETDKMDT--DMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLV 356
S +++++E + D + ++ L AC+ GK IH +R L++ETSL+
Sbjct: 216 SSLVSLREMVLVGIRPDRFSFISGLGACSIEGCRRSGKEIHCQVIRGGFEMDLMVETSLI 275
Query: 357 DMYGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDA 536
DMYGKCG AER FNR+ +N+++WNAM+AAY N E+ + ++ PDA
Sbjct: 276 DMYGKCGSVDYAEREFNRIVHKNIVAWNAMIAAYVSNACFHESFSCVKEMQEVFKLRPDA 335
Query: 537 ITLATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
IT+ +LP+ A++ ++ G IH I+ + + ++
Sbjct: 336 ITMINLLPSCAQMGAVLVGKSIHASAIRKGILPHLVL 372
Score = 119 bits (297), Expect = 1e-24
Identities = 62/199 (31%), Positives = 116/199 (58%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR G+ +++T+L+DMY +CG ++ A +F ++ +++ +WNA++ YV N +A+
Sbjct: 362 IRKGILPHLVLETALVDMYGRCGKLKLAEHVFVQINGKNLASWNAMLAAYVQNGQYTEAL 421
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
N+ + + D ITI ++LPA A L LS G+ IH F ++ L S+ ++ S+ +
Sbjct: 422 ELFQNIWY-ESLQPDAITIASVLPAYADLTSLSEGRQIHAFIIKLGLNSNTIVSNSITYL 480
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y KCGD +A R F+ M ++++SWN ++ AYA +G+ ++ LF ++ I P+ T
Sbjct: 481 YAKCGDLHTARRCFDGMLFKDVVSWNTIIMAYAIHGFGRISIALFREM-IENGIEPNKST 539
Query: 543 LATILPAYAELASLREGMQ 599
++L + + + EG +
Sbjct: 540 FVSLLSSCSISGLVDEGWE 558
Score = 77.0 bits (188), Expect = 5e-12
Identities = 57/211 (27%), Positives = 99/211 (46%)
Frame = +3
Query: 15 LESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVI 194
+E + T + + G++E A+ LF+ M+ WN +I V N +A++
Sbjct: 62 IEPKNLKLTRALPAFVDSGSMENALSLFEEMNHWDSYTWNIIIKDLVDNGLFKQAINFFH 121
Query: 195 NMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKC 374
M E + D T ++ ACA + L G+ +H V+ L + SL+ MY K
Sbjct: 122 RM-EFEGARPDKFTYPFVIKACAGVLSLKGGEKVHAKLVKVGLDLDVYNCNSLISMYMKV 180
Query: 375 GDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATI 554
G + + VF M R+L+SWN++++ Y Q G +L ++V+ R PD + +
Sbjct: 181 GCVELGQNVFREMAVRDLVSWNSLLSGYQQVGDGLSSLVSLREMVLVGIR-PDRFSFISG 239
Query: 555 LPAYAELASLREGMQIHCYTIKLDFVTNTII 647
L A + R G +IHC I+ F + ++
Sbjct: 240 LGACSIEGCRRSGKEIHCQVIRGGFEMDLMV 270
>ref|XP_006486706.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Citrus sinensis]
Length = 810
Score = 235 bits (599), Expect = 1e-59
Identities = 117/217 (53%), Positives = 156/217 (71%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ GLE D MVQTSL+DMY KCG V++A RLF+ + R+IVAWNA++GGYV+N H +++
Sbjct: 262 IKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESF 321
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
SC+ M E D ++ D ITI+NLLP+C +L L GKSIHG+A+R+ L ++ LET+L+DM
Sbjct: 322 SCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDM 381
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y G K E++F M +NL+SWNAM+AAY +NG N EA+ LF DL E PDA+T
Sbjct: 382 YAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDL-WSEPLKPDAMT 440
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
A+ILPAYAE+A+L + MQIH KL V+N ISN
Sbjct: 441 FASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISN 477
Score = 145 bits (365), Expect = 1e-32
Identities = 81/214 (37%), Positives = 121/214 (56%)
Frame = +3
Query: 6 RCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVS 185
+ GL SD V SLI MY K G VE A R+FD M R V+WN++IGGY + ++
Sbjct: 162 KSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLV 221
Query: 186 CVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMY 365
MQ + D ++++ L A + L +GK IH ++ L ++++TSLVDMY
Sbjct: 222 FFKEMQNCG-LRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMY 280
Query: 366 GKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITL 545
GKCG AER+FN + RN+++WNAMV Y N E+ + ++ ++ NPD IT+
Sbjct: 281 GKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITI 340
Query: 546 ATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
+LP+ +L +L EG IH Y I+ F+ N +
Sbjct: 341 INLLPSCTKLGALLEGKSIHGYAIRKGFLPNVAL 374
Score = 111 bits (277), Expect = 2e-22
Identities = 59/197 (29%), Positives = 114/197 (57%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR G + ++T+LIDMY+ G ++ +LF +M +++V+WNA+I YV N +A+
Sbjct: 364 IRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAM 423
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
++ ++ + D +T ++LPA A++ LS IH + L+S++ + S+V M
Sbjct: 424 ELFQDLW-SEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYM 482
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y KCGD ++A +F+ + G++++SWN ++ AYA +G ++ LF ++ + P+ T
Sbjct: 483 YAKCGDLQTARVIFDGIMGKDVVSWNVIIMAYAIHGLGKISIQLFSEM-REKGIKPNEST 541
Query: 543 LATILPAYAELASLREG 593
++L + + + EG
Sbjct: 542 FVSLLSSCSISGMVDEG 558
Score = 86.3 bits (212), Expect = 8e-15
Identities = 62/197 (31%), Positives = 95/197 (48%)
Frame = +3
Query: 30 MVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQET 209
+ +T + G++E A LF+ MS WN +I G+V N +AV M
Sbjct: 69 ITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMV-C 127
Query: 210 DKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKS 389
+ D T ++ ACA L LS G+ +HG + L S + + SL+ MY K G +
Sbjct: 128 EGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVEC 187
Query: 390 AERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYA 569
AER+F+ M R+ +SWN+M+ Y G +L F ++ R D +L + L A +
Sbjct: 188 AERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRY-DRFSLISALGAIS 246
Query: 570 ELASLREGMQIHCYTIK 620
L+ G +IHC IK
Sbjct: 247 IEGCLKIGKEIHCQVIK 263
>ref|XP_006422555.1| hypothetical protein CICLE_v10030410mg [Citrus clementina]
gi|557524489|gb|ESR35795.1| hypothetical protein
CICLE_v10030410mg [Citrus clementina]
Length = 810
Score = 235 bits (599), Expect = 1e-59
Identities = 117/217 (53%), Positives = 156/217 (71%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ GLE D MVQTSL+DMY KCG V++A RLF+ + R+IVAWNA++GGYV+N H +++
Sbjct: 262 IKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESF 321
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
SC+ M E D ++ D ITI+NLLP+C +L L GKSIHG+A+R+ L ++ LET+L+DM
Sbjct: 322 SCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDM 381
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y G K E++F M +NL+SWNAM+AAY +NG N EA+ LF DL E PDA+T
Sbjct: 382 YAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDL-WSEPLKPDAMT 440
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
A+ILPAYAE+A+L + MQIH KL V+N ISN
Sbjct: 441 FASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISN 477
Score = 144 bits (364), Expect = 2e-32
Identities = 81/214 (37%), Positives = 121/214 (56%)
Frame = +3
Query: 6 RCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVS 185
+ GL SD V SLI MY K G VE A R+FD M R V+WN++IGGY + ++
Sbjct: 162 KSGLNSDVYVCNSLIVMYMKLGCVECAERVFDEMPVRDTVSWNSMIGGYCSVGDGVSSLV 221
Query: 186 CVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMY 365
MQ + D ++++ L A + L +GK IH ++ L ++++TSLVDMY
Sbjct: 222 FFKEMQNCG-LRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMY 280
Query: 366 GKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITL 545
GKCG AER+FN + RN+++WNAMV Y N E+ + ++ ++ NPD IT+
Sbjct: 281 GKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITI 340
Query: 546 ATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
+LP+ +L +L EG IH Y I+ F+ N +
Sbjct: 341 INLLPSCTKLGALLEGKSIHGYAIRKGFLPNVAL 374
Score = 107 bits (268), Expect = 2e-21
Identities = 58/197 (29%), Positives = 112/197 (56%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR G + ++T+LIDMY+ G ++ +LF +M +++V+WNA+I YV N +A+
Sbjct: 364 IRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAM 423
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
++ ++ + D +T ++LPA A++ LS IH + L+S++ + S+V
Sbjct: 424 ELFQDLW-SEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYT 482
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y KCGD ++A +F + G++++SWN ++ AYA +G ++ LF ++ + P+ T
Sbjct: 483 YAKCGDLQTARVIFYGIMGKDVVSWNVIIMAYAIHGLGKISIQLFSEM-REKGIKPNEST 541
Query: 543 LATILPAYAELASLREG 593
++L + + + EG
Sbjct: 542 FVSLLSSCSISGMVDEG 558
Score = 89.0 bits (219), Expect = 1e-15
Identities = 64/197 (32%), Positives = 95/197 (48%)
Frame = +3
Query: 30 MVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQET 209
+ +T + G++E A LFD MS WN +I G+V N +AV M
Sbjct: 69 ITKTRALQELVSSGSMESACYLFDKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMV-C 127
Query: 210 DKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKS 389
+ D T ++ ACA L LS G+ +HG + L S + + SL+ MY K G +
Sbjct: 128 EGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVEC 187
Query: 390 AERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYA 569
AERVF+ M R+ +SWN+M+ Y G +L F ++ R D +L + L A +
Sbjct: 188 AERVFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRY-DRFSLISALGAIS 246
Query: 570 ELASLREGMQIHCYTIK 620
L+ G +IHC IK
Sbjct: 247 IEGCLKIGKEIHCQVIK 263
>ref|XP_002306200.1| hypothetical protein POPTR_0004s18470g [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| hypothetical protein
POPTR_0004s18470g [Populus trichocarpa]
Length = 784
Score = 228 bits (582), Expect = 1e-57
Identities = 121/217 (55%), Positives = 152/217 (70%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR LE D MVQTSLIDMY KCG V++A R+F+ + S++IVAWNA+IGG
Sbjct: 252 IRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG----------- 300
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
MQE DK+ D+IT++NLLP+C+Q L GKSIHGFA+R+ L +LVLET+LVDM
Sbjct: 301 -----MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDM 355
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YGKCG+ K AE VFN+M +N++SWN MVAAY QN EAL +F ++ E PDAIT
Sbjct: 356 YGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQH-ILNEPLKPDAIT 414
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
+A++LPA AELAS EG QIH Y +KL +NT ISN
Sbjct: 415 IASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISN 451
Score = 130 bits (327), Expect = 4e-28
Identities = 72/215 (33%), Positives = 117/215 (54%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ G + D V LIDMY K G +E A ++FD M R +V+WN+++ GY ++ + ++
Sbjct: 151 IKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSL 210
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
C M D +++ L AC+ L G IH +R +L ++++TSL+DM
Sbjct: 211 MCFKEMLRLGNK-ADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDM 269
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YGKCG AERVFNR+ +N+++WNAM+ ++ D VI PD IT
Sbjct: 270 YGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQED-----------DKVI-----PDVIT 313
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
+ +LP+ ++ +L EG IH + I+ F+ ++
Sbjct: 314 MINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVL 348
Score = 119 bits (299), Expect = 6e-25
Identities = 60/188 (31%), Positives = 112/188 (59%)
Frame = +3
Query: 30 MVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQET 209
+++T+L+DMY KCG ++ A +F+ M+ +++V+WN ++ YV N +A+ ++
Sbjct: 347 VLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILN- 405
Query: 210 DKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKS 389
+ + D ITI ++LPA A+L S GK IH + ++ L S+ + ++V MY KCGD ++
Sbjct: 406 EPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQT 465
Query: 390 AERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYA 569
A F+ M ++++SWN M+ AYA +G+ ++ F ++ G+ P+ T ++L A +
Sbjct: 466 AREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEM-RGKGFKPNGSTFVSLLTACS 524
Query: 570 ELASLREG 593
+ EG
Sbjct: 525 ISGLIDEG 532
Score = 89.0 bits (219), Expect = 1e-15
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 9/201 (4%)
Frame = +3
Query: 66 CGTVEF-----AVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQETDKMDTDM 230
CG VE A+ +F+ M+ WN +I GY N +A+ M E + + +D
Sbjct: 66 CGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRM-ECEGIRSDN 124
Query: 231 ITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKSAERVFNR 410
T ++ AC +L L +G+ +HG ++ + + L+DMY K G + AE+VF+
Sbjct: 125 FTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDE 184
Query: 411 MGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYAELASLRE 590
M R+L+SWN+MV+ Y +G +L F ++ + D + + L A + LR
Sbjct: 185 MPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEM-LRLGNKADRFGMISALGACSIEHCLRS 243
Query: 591 GMQIHCYTIK----LDFVTNT 641
GM+IHC I+ LD + T
Sbjct: 244 GMEIHCQVIRSELELDIMVQT 264
>ref|XP_006283134.1| hypothetical protein CARUB_v10004161mg [Capsella rubella]
gi|482551839|gb|EOA16032.1| hypothetical protein
CARUB_v10004161mg [Capsella rubella]
Length = 807
Score = 212 bits (540), Expect = 7e-53
Identities = 109/210 (51%), Positives = 145/210 (69%)
Frame = +3
Query: 24 DPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQ 203
D MV TS++DMYSK G V +A R+F+ M R+IV+WN ++G Y +N + A C M
Sbjct: 266 DVMVLTSILDMYSKYGEVSYAERIFNGMIQRNIVSWNVMVGCYAINGRVIDAFVCFQKMS 325
Query: 204 ETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDP 383
E + + D+IT++NLLPACA L G+ IHG+A+RR L HLVLET+LVDMYG+C
Sbjct: 326 EQNGLQPDVITLINLLPACAILE----GRMIHGYAIRRGFLPHLVLETALVDMYGECRQL 381
Query: 384 KSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPA 563
KSAE +F+RM +NL+SWN+++AAY QNG N AL LF +L S PD+ T+A+ILPA
Sbjct: 382 KSAELIFDRMAEKNLVSWNSIIAAYVQNGKNYSALELFQEL-WDSSLVPDSTTIASILPA 440
Query: 564 YAELASLREGMQIHCYTIKLDFVTNTIISN 653
YAE SL EG +IH Y +K + +NTII N
Sbjct: 441 YAESLSLSEGRKIHAYIVKSRYGSNTIILN 470
Score = 126 bits (316), Expect = 7e-27
Identities = 78/216 (36%), Positives = 115/216 (53%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ SD V SLI MY K G A ++F+ M R IV+WN++I GY+ ++++
Sbjct: 157 IKLRFVSDVYVSNSLISMYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALEDGIRSL 216
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVR-RQLLSHLVLETSLVD 359
M + D +I++ L AC+ + +GK IH A+R R +++ TS++D
Sbjct: 217 ILFKEMLKYG-FKPDRFSIMSALGACSHVYGPKMGKEIHCHAIRSRTETGDVMVLTSILD 275
Query: 360 MYGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAI 539
MY K G+ AER+FN M RN++SWN MV YA NG +A F + PD I
Sbjct: 276 MYSKYGEVSYAERIFNGMIQRNIVSWNVMVGCYAINGRVIDAFVCFQKMSEQNGLQPDVI 335
Query: 540 TLATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
TL +LPA A L EG IH Y I+ F+ + ++
Sbjct: 336 TLINLLPACAIL----EGRMIHGYAIRRGFLPHLVL 367
Score = 117 bits (294), Expect = 2e-24
Identities = 64/199 (32%), Positives = 116/199 (58%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR G +++T+L+DMY +C ++ A +FD M+ +++V+WN++I YV N A+
Sbjct: 357 IRRGFLPHLVLETALVDMYGECRQLKSAELIFDRMAEKNLVSWNSIIAAYVQNGKNYSAL 416
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+ ++ + D TI ++LPA A+ LS G+ IH + V+ + S+ ++ SLV M
Sbjct: 417 ELFQELWDSSLVP-DSTTIASILPAYAESLSLSEGRKIHAYIVKSRYGSNTIILNSLVHM 475
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y CGD + A FN + ++++SWN+++ AYA +G+ ++ LF ++ I NP+ T
Sbjct: 476 YAMCGDLEDARTCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEM-IASKVNPNNST 534
Query: 543 LATILPAYAELASLREGMQ 599
A++L A + + EG +
Sbjct: 535 FASLLAACSISGMVDEGWE 553
Score = 91.3 bits (225), Expect = 2e-16
Identities = 55/200 (27%), Positives = 101/200 (50%)
Frame = +3
Query: 21 SDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINM 200
+DP + T + ++ G ++ A++LFD M+ + WN +I GY ++AV M
Sbjct: 63 NDPAL-TRALRGFADSGLMDDALQLFDEMNKADVYVWNVIIRGYTSCGFYIEAVQFYCRM 121
Query: 201 QETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGD 380
+ D T ++ + A + L GK IH ++ + +S + + SL+ MY K G
Sbjct: 122 VLAG-IKADSFTYPFVIKSVAGISSLEDGKKIHAMVIKLRFVSDVYVSNSLISMYMKLGC 180
Query: 381 PKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILP 560
AE+VF M R+++SWN+M++ Y +L LF ++ + PD ++ + L
Sbjct: 181 AWDAEKVFEEMPERDIVSWNSMISGYLALEDGIRSLILFKEM-LKYGFKPDRFSIMSALG 239
Query: 561 AYAELASLREGMQIHCYTIK 620
A + + + G +IHC+ I+
Sbjct: 240 ACSHVYGPKMGKEIHCHAIR 259
>ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis
thaliana] gi|7270464|emb|CAB80230.1| putative protein
[Arabidopsis thaliana] gi|332661071|gb|AEE86471.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 804
Score = 208 bits (530), Expect = 1e-51
Identities = 111/218 (50%), Positives = 148/218 (67%), Gaps = 1/218 (0%)
Frame = +3
Query: 3 IRCGLES-DPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKA 179
+R +E+ D MV TS++DMYSK G V +A R+F+ M R+IVAWN +IG Y N A
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA 317
Query: 180 VSCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVD 359
C M E + + D+IT +NLLPA A L G++IHG+A+RR L H+VLET+L+D
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALID 373
Query: 360 MYGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAI 539
MYG+CG KSAE +F+RM +N+ISWN+++AAY QNG N AL LF +L S PD+
Sbjct: 374 MYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL-WDSSLVPDST 432
Query: 540 TLATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
T+A+ILPAYAE SL EG +IH Y +K + +NTII N
Sbjct: 433 TIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILN 470
Score = 123 bits (308), Expect = 6e-26
Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ G SD V SLI +Y K G A ++F+ M R IV+WN++I GY+ ++
Sbjct: 157 IKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSL 216
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQL-LSHLVLETSLVD 359
M + D + ++ L AC+ + +GK IH AVR ++ +++ TS++D
Sbjct: 217 MLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILD 275
Query: 360 MYGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAI 539
MY K G+ AER+FN M RN+++WN M+ YA+NG +A F + PD I
Sbjct: 276 MYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVI 335
Query: 540 TLATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
T +LPA A L EG IH Y ++ F+ + ++
Sbjct: 336 TSINLLPASAIL----EGRTIHGYAMRRGFLPHMVL 367
Score = 121 bits (304), Expect = 2e-25
Identities = 64/199 (32%), Positives = 118/199 (59%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
+R G +++T+LIDMY +CG ++ A +FD M+ +++++WN++I YV N A+
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+ ++ + D TI ++LPA A+ LS G+ IH + V+ + S+ ++ SLV M
Sbjct: 417 ELFQELWDSSLVP-DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHM 475
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y CGD + A + FN + ++++SWN+++ AYA +G+ ++ LF ++ I NP+ T
Sbjct: 476 YAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEM-IASRVNPNKST 534
Query: 543 LATILPAYAELASLREGMQ 599
A++L A + + EG +
Sbjct: 535 FASLLAACSISGMVDEGWE 553
Score = 84.3 bits (207), Expect = 3e-14
Identities = 55/209 (26%), Positives = 102/209 (48%)
Frame = +3
Query: 21 SDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINM 200
+DP + T + ++ +E A++LFD M+ WN +I G+ ++AV M
Sbjct: 63 NDPAL-TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM 121
Query: 201 QETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGD 380
+ D T ++ + A + L GK IH ++ +S + + SL+ +Y K G
Sbjct: 122 VFAG-VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGC 180
Query: 381 PKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILP 560
AE+VF M R+++SWN+M++ Y G +L LF ++ + PD + + L
Sbjct: 181 AWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEM-LKCGFKPDRFSTMSALG 239
Query: 561 AYAELASLREGMQIHCYTIKLDFVTNTII 647
A + + S + G +IHC+ ++ T ++
Sbjct: 240 ACSHVYSPKMGKEIHCHAVRSRIETGDVM 268
>ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312926|gb|EFH43349.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 803
Score = 207 bits (527), Expect = 2e-51
Identities = 111/218 (50%), Positives = 148/218 (67%), Gaps = 1/218 (0%)
Frame = +3
Query: 3 IRCGLES-DPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKA 179
+R +E+ D MV TS++DMYSK G V +A R+F + R+IVAWN LIG Y N+ A
Sbjct: 254 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDA 313
Query: 180 VSCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVD 359
C M E + + D+IT++NLLPACA L G++IHG+A+RR L H+VL+T+L+D
Sbjct: 314 FLCFQKMSEQNGLQPDVITLINLLPACAILE----GRTIHGYAMRRGFLPHIVLDTALID 369
Query: 360 MYGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAI 539
MYG+ G KSAE +F+R+ +NLISWN+++AAY QNG N AL LF L S PD+
Sbjct: 370 MYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKL-WDSSLLPDST 428
Query: 540 TLATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
T+A+ILPAYAE SL EG QIH Y +K + +NTII N
Sbjct: 429 TIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILN 466
Score = 114 bits (284), Expect = 3e-23
Identities = 68/216 (31%), Positives = 114/216 (52%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ SD V SLI +Y K G A ++F+ M R IV+WN++I GY+ +++
Sbjct: 153 IKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSL 212
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQL-LSHLVLETSLVD 359
M + D + ++ L AC+ + ++GK +H AVR ++ +++ TS++D
Sbjct: 213 MLFKEMLKFG-FKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILD 271
Query: 360 MYGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAI 539
MY K G+ AER+F + RN+++WN ++ YA+N +A F + PD I
Sbjct: 272 MYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVI 331
Query: 540 TLATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
TL +LPA A L EG IH Y ++ F+ + ++
Sbjct: 332 TLINLLPACAIL----EGRTIHGYAMRRGFLPHIVL 363
Score = 112 bits (281), Expect = 8e-23
Identities = 61/199 (30%), Positives = 116/199 (58%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
+R G ++ T+LIDMY + G ++ A +FD ++ +++++WN++I YV N A+
Sbjct: 353 MRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSAL 412
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+ ++ + D TI ++LPA A+ LS G+ IH + V+ + S+ ++ SLV M
Sbjct: 413 ELFQKLWDSSLLP-DSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHM 471
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y CGD + A + FN + ++++SWN+++ AYA +G+ ++ LF ++ I +P+ T
Sbjct: 472 YAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEM-IASKVDPNKST 530
Query: 543 LATILPAYAELASLREGMQ 599
A++L A + + EG +
Sbjct: 531 FASLLAACSISGMVDEGWE 549
Score = 82.8 bits (203), Expect = 9e-14
Identities = 52/209 (24%), Positives = 101/209 (48%)
Frame = +3
Query: 21 SDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINM 200
+DP + T + ++ G +E A++LFD M+ WN +I G+ +A+ M
Sbjct: 59 NDPAL-TRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRM 117
Query: 201 QETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGD 380
+ + D T ++ + + L GK IH ++ + +S + + SL+ +Y K G
Sbjct: 118 VFSG-VKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGC 176
Query: 381 PKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILP 560
AE+VF M R+++SWN+M++ Y +L LF ++ + PD + + L
Sbjct: 177 SWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEM-LKFGFKPDRFSTMSALG 235
Query: 561 AYAELASLREGMQIHCYTIKLDFVTNTII 647
A + + S G ++HC+ ++ T ++
Sbjct: 236 ACSHVYSPNMGKELHCHAVRSRIETGDVM 264
>gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 201 bits (510), Expect = 2e-49
Identities = 99/217 (45%), Positives = 141/217 (64%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR GLE D V TSL+DMY KCG V +A +F TM R++V WN +IGGY LN P +A
Sbjct: 236 IRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAF 295
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
C + M+ + + +++T +NLL ACAQ G+S+HG+ VRRQ L H+VLET+L++M
Sbjct: 296 DCFMQMR-AEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEM 354
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YGK G +S+E++F ++ + L+SWN M+AAY EA+ LF +L + + PD T
Sbjct: 355 YGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLEL-LNQPLYPDYFT 413
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
++T++PA+ L SLR QIH Y I L + NT+I N
Sbjct: 414 MSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMN 450
Score = 132 bits (331), Expect = 1e-28
Identities = 74/215 (34%), Positives = 110/215 (51%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ GLE D SL+ Y+K G VE A R+FD M R IV WN ++ GYV N A+
Sbjct: 134 IKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLAL 193
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+C M + ++ D + I+ L AC GK IHG+ +R L + + TSL+DM
Sbjct: 194 ACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDM 253
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y KCG+ A VF M R +++WN M+ YA N EA + F + E + +T
Sbjct: 254 YCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQM-RAEGLQVEVVT 312
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
+L A A+ S G +H Y ++ F+ + ++
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVL 347
Score = 90.5 bits (223), Expect = 4e-16
Identities = 46/188 (24%), Positives = 101/188 (53%)
Frame = +3
Query: 30 MVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQET 209
+++T+L++MY K G VE + ++F ++++++V+WN +I Y+ +A++ + +
Sbjct: 346 VLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLN- 404
Query: 210 DKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKS 389
+ D T+ ++PA L L + IH + + + ++ +++ MY + GD +
Sbjct: 405 QPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVA 464
Query: 390 AERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYA 569
+ +F++M +++ISWN M+ YA +G AL +F ++ P+ T ++L A +
Sbjct: 465 SREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKY-NGLQPNESTFVSVLTACS 523
Query: 570 ELASLREG 593
+ EG
Sbjct: 524 VSGLVDEG 531
Score = 76.6 bits (187), Expect = 6e-12
Identities = 55/193 (28%), Positives = 86/193 (44%)
Frame = +3
Query: 42 SLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQETDKMD 221
SL+ + G ++ AV + N +I G+ P A++ M E D
Sbjct: 46 SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLE-DGAR 104
Query: 222 TDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKSAERV 401
D T ++ CA+L L G++ HG ++ L + SLV Y K G + AERV
Sbjct: 105 PDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERV 164
Query: 402 FNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYAELAS 581
F+ M R++++WN MV Y NG AL F ++ D++ + L A S
Sbjct: 165 FDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFS 224
Query: 582 LREGMQIHCYTIK 620
+G +IH Y I+
Sbjct: 225 SMQGKEIHGYVIR 237
>gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group] gi|125584837|gb|EAZ25501.1| hypothetical protein
OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 201 bits (510), Expect = 2e-49
Identities = 99/217 (45%), Positives = 141/217 (64%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR GLE D V TSL+DMY KCG V +A +F TM R++V WN +IGGY LN P +A
Sbjct: 236 IRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAF 295
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
C + M+ + + +++T +NLL ACAQ G+S+HG+ VRRQ L H+VLET+L++M
Sbjct: 296 DCFMQMR-AEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEM 354
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YGK G +S+E++F ++ + L+SWN M+AAY EA+ LF +L + + PD T
Sbjct: 355 YGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLEL-LNQPLYPDYFT 413
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
++T++PA+ L SLR QIH Y I L + NT+I N
Sbjct: 414 MSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMN 450
Score = 132 bits (332), Expect = 9e-29
Identities = 74/215 (34%), Positives = 110/215 (51%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ GLE D SL+ Y+K G VE A R+FD M R IV WN ++ GYV N A+
Sbjct: 134 IKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLAL 193
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+C M + ++ D + I+ L AC GK IHG+ +R L + + TSL+DM
Sbjct: 194 ACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDM 253
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y KCG+ A VF M R +++WN M+ YA N EA + F + E + +T
Sbjct: 254 YCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQM-RAEGLQVEVVT 312
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
+L A A+ S G +H Y ++ F+ + ++
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVL 347
Score = 90.5 bits (223), Expect = 4e-16
Identities = 46/188 (24%), Positives = 101/188 (53%)
Frame = +3
Query: 30 MVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQET 209
+++T+L++MY K G VE + ++F ++++++V+WN +I Y+ +A++ + +
Sbjct: 346 VLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLN- 404
Query: 210 DKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKS 389
+ D T+ ++PA L L + IH + + + ++ +++ MY + GD +
Sbjct: 405 QPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVA 464
Query: 390 AERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYA 569
+ +F++M +++ISWN M+ YA +G AL +F ++ P+ T ++L A +
Sbjct: 465 SREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKY-NGLQPNESTFVSVLTACS 523
Query: 570 ELASLREG 593
+ EG
Sbjct: 524 VSGLVDEG 531
Score = 77.8 bits (190), Expect = 3e-12
Identities = 55/193 (28%), Positives = 86/193 (44%)
Frame = +3
Query: 42 SLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQETDKMD 221
SL+ + G ++ AV + N +I G+ P A++ M E D
Sbjct: 46 SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLE-DGAR 104
Query: 222 TDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKSAERV 401
D T ++ CA+L L G++ HG ++ L + SLV Y K G + AERV
Sbjct: 105 PDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERV 164
Query: 402 FNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYAELAS 581
F+ M R++++WN MV Y NG AL F ++ D++ + L A S
Sbjct: 165 FDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVS 224
Query: 582 LREGMQIHCYTIK 620
+G +IH Y I+
Sbjct: 225 SMQGKEIHGYVIR 237
>ref|XP_006412144.1| hypothetical protein EUTSA_v10024444mg [Eutrema salsugineum]
gi|557113314|gb|ESQ53597.1| hypothetical protein
EUTSA_v10024444mg [Eutrema salsugineum]
Length = 804
Score = 198 bits (503), Expect = 1e-48
Identities = 106/218 (48%), Positives = 148/218 (67%), Gaps = 1/218 (0%)
Frame = +3
Query: 3 IRCGLES-DPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKA 179
IR +E+ D MV +S++DMYSK G + A ++F+ M ++IVAWN +IG Y + A
Sbjct: 257 IRSSIETGDVMVLSSILDMYSKYGELICAEKVFNGMIQKNIVAWNIMIGCYARYGRVIDA 316
Query: 180 VSCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVD 359
C M E + + D+IT++NLLPACA L G++IHG+AVRR L H+VLET+L+D
Sbjct: 317 FLCFQKMSEENGLRPDVITLINLLPACAILE----GQAIHGYAVRRGFLPHIVLETALID 372
Query: 360 MYGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAI 539
MYG CG ++AE +F+RM +NL++WN+++AAY QNG N AL LF +L S PD+
Sbjct: 373 MYGACGLLEAAEVIFDRMAEKNLVTWNSIIAAYVQNGNNYSALELFQEL-WDSSLVPDST 431
Query: 540 TLATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
T+A+ILPAYAE SL EG Q+H Y +K + +NTII N
Sbjct: 432 TIASILPAYAESLSLSEGRQLHAYIVKARYGSNTIILN 469
Score = 120 bits (301), Expect = 4e-25
Identities = 65/209 (31%), Positives = 122/209 (58%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
+R G +++T+LIDMY CG +E A +FD M+ +++V WN++I YV N + A+
Sbjct: 356 VRRGFLPHIVLETALIDMYGACGLLEAAEVIFDRMAEKNLVTWNSIIAAYVQNGNNYSAL 415
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+ ++ + D TI ++LPA A+ LS G+ +H + V+ + S+ ++ SLV M
Sbjct: 416 ELFQELWDSSLVP-DSTTIASILPAYAESLSLSEGRQLHAYIVKARYGSNTIILNSLVHM 474
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y CGD + A + F+ + ++++SWN+++ AYA +G+ ++ LF +++ NP+ T
Sbjct: 475 YALCGDLEDARKCFDHVLFKDVVSWNSIIMAYAVHGFGRNSICLFSEMMT-TGVNPNKST 533
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDF 629
A++L A + + EG H ++K ++
Sbjct: 534 FASLLAACSISGMIDEGWD-HFNSMKREY 561
Score = 115 bits (288), Expect = 1e-23
Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ G SD V SLI +Y K G A ++F+ M R V+WN++I GY+ ++++
Sbjct: 156 IKLGFYSDVYVCNSLISLYMKLGCAWDAEKVFEEMLERDAVSWNSMISGYLALGDGLRSL 215
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQL-LSHLVLETSLVD 359
M + D + ++ L AC+ + +GK IH A+R + +++ +S++D
Sbjct: 216 ILFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIHCHAIRSSIETGDVMVLSSILD 274
Query: 360 MYGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAI 539
MY K G+ AE+VFN M +N+++WN M+ YA+ G +A F + PD I
Sbjct: 275 MYSKYGELICAEKVFNGMIQKNIVAWNIMIGCYARYGRVIDAFLCFQKMSEENGLRPDVI 334
Query: 540 TLATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
TL +LPA A L EG IH Y ++ F+ + ++
Sbjct: 335 TLINLLPACAIL----EGQAIHGYAVRRGFLPHIVL 366
Score = 82.8 bits (203), Expect = 9e-14
Identities = 52/197 (26%), Positives = 93/197 (47%)
Frame = +3
Query: 57 YSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQETDKMDTDMIT 236
++ G +E A+ LFD M+ WN +I G+ ++V M + D T
Sbjct: 73 FADSGLMEDALHLFDEMNKADAFVWNVMIRGFASCGLYHESVQFYCRMVFAG-IKADSFT 131
Query: 237 IVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKSAERVFNRMG 416
++ + A + L GK +H ++ S + + SL+ +Y K G AE+VF M
Sbjct: 132 YPFVIKSVAGISSLKEGKKVHAMVIKLGFYSDVYVCNSLISLYMKLGCAWDAEKVFEEML 191
Query: 417 GRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYAELASLREGM 596
R+ +SWN+M++ Y G +L LF ++ + PD + + L A + + S + G
Sbjct: 192 ERDAVSWNSMISGYLALGDGLRSLILFKEM-LKCGFKPDRFSTMSALGACSHVYSPKMGK 250
Query: 597 QIHCYTIKLDFVTNTII 647
+IHC+ I+ T ++
Sbjct: 251 EIHCHAIRSSIETGDVM 267
>ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 193 bits (490), Expect = 4e-47
Identities = 94/217 (43%), Positives = 138/217 (63%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR GLE D V TSL+DMY KCG + A +F TM SR++V WN +IGGY LN P +A
Sbjct: 237 IRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAF 296
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
C + M+ + +++T +NLL ACAQ G+S+HG+ R Q L H+VLET+L++M
Sbjct: 297 DCFVQMK-AEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEM 355
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y K G KS+E +F +M + L+SWN M+AAY EA+ LF +L + + PD T
Sbjct: 356 YSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLEL-LNQPLYPDYFT 414
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
++ ++PA+ L LR+ Q+H Y ++LD+ NT+++N
Sbjct: 415 MSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTN 451
Score = 126 bits (317), Expect = 5e-27
Identities = 74/216 (34%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 IRCGLE-SDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKA 179
IR GL S+ SL+ Y+K G V A R+FD M R IV WN+++ GYV N A
Sbjct: 134 IRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALA 193
Query: 180 VSCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVD 359
+ C M E ++ D + I+ L AC L G+ +H + +R L + + TSL+D
Sbjct: 194 LDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLD 253
Query: 360 MYGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAI 539
MY KCG SAE +F M R +++WN M+ YA NG EA + F + E + +
Sbjct: 254 MYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMK-AEGHQVEVV 312
Query: 540 TLATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
T +L A A+ S G +H Y + F+ + ++
Sbjct: 313 TAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVL 348
Score = 97.1 bits (240), Expect = 4e-18
Identities = 50/188 (26%), Positives = 104/188 (55%)
Frame = +3
Query: 30 MVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQET 209
+++T+L++MYSK G V+ + +F M+++++V+WN +I Y+ +A++ + +
Sbjct: 347 VLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLN- 405
Query: 210 DKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKS 389
+ D T+ ++PA L L + +H + VR + ++ +++ MY +CGD S
Sbjct: 406 QPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVS 465
Query: 390 AERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYA 569
+ ++F++M G+++ISWN ++ YA +G AL +F ++ P+ T ++L A +
Sbjct: 466 SRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMK-SNGLQPNESTFVSVLTACS 524
Query: 570 ELASLREG 593
EG
Sbjct: 525 VSGMADEG 532
Score = 74.7 bits (182), Expect = 2e-11
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 1/194 (0%)
Frame = +3
Query: 42 SLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQETDKMD 221
SL+ ++ G + A L SS N +I G+ P A++ M
Sbjct: 48 SLVLSHAAAGRMHDA--LAAVRSSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARP 105
Query: 222 TDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLL-SHLVLETSLVDMYGKCGDPKSAER 398
D T ++ CA+L L G++ H A+R L+ S + SL+ Y K G AER
Sbjct: 106 -DRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAER 164
Query: 399 VFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYAELA 578
VF+ M R++++WN+MV Y NG AL+ F ++ G D + + L A +
Sbjct: 165 VFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDS 224
Query: 579 SLREGMQIHCYTIK 620
+L +G ++H Y I+
Sbjct: 225 ALMQGREVHAYVIR 238
>dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 193 bits (490), Expect = 4e-47
Identities = 96/217 (44%), Positives = 138/217 (63%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR G+E D V TS++DMY KCG + A +F TM SR++V WN +IGGY LN P +A
Sbjct: 238 IRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAF 297
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
C + M+ + +++T +NLL ACAQ G+S+HG+ RRQ L H+VLET+L++M
Sbjct: 298 DCFVQMK-AEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEM 356
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y K G KS+E+VF +M + L+SWN M+AAY EA+ LF DL + + PD T
Sbjct: 357 YSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDL-LNQPLYPDYFT 415
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
++ ++PA+ L LR+ Q+H Y I+L + NT+I N
Sbjct: 416 MSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMN 452
Score = 125 bits (315), Expect = 9e-27
Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 IRCGLES-DPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKA 179
IR G+ + D SL+ Y++ G V+ A R+FD M +R +V WN+++ GYV N A
Sbjct: 135 IRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGYVSNGLGTLA 194
Query: 180 VSCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVD 359
+ C M E ++ D + I+ L AC L G+ +H + +R + + + TS++D
Sbjct: 195 LVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILD 254
Query: 360 MYGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAI 539
MY KCGD SAE VF M R +++WN M+ YA N EA + F + E + +
Sbjct: 255 MYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMK-AEGHQVEVV 313
Query: 540 TLATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
T +L A A+ S G +H Y + F+ + ++
Sbjct: 314 TAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVL 349
Score = 99.8 bits (247), Expect = 7e-19
Identities = 51/188 (27%), Positives = 106/188 (56%)
Frame = +3
Query: 30 MVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQET 209
+++T+L++MYSK G V+ + ++F M+++++V+WN +I Y+ M+A++ +++
Sbjct: 348 VLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLN- 406
Query: 210 DKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKS 389
+ D T+ ++PA L L + +H + +R + ++ +++ MY +CGD S
Sbjct: 407 QPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLS 466
Query: 390 AERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYA 569
+ +F++M +++ISWN M+ YA +G AL +F ++ R P+ T ++L A +
Sbjct: 467 SREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLR-PNESTFVSVLTACS 525
Query: 570 ELASLREG 593
EG
Sbjct: 526 VSGLTDEG 533
Score = 72.0 bits (175), Expect = 2e-10
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 1/194 (0%)
Frame = +3
Query: 42 SLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQETDKMD 221
SL+ ++ G ++ A SR N +I G P A++ M
Sbjct: 47 SLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARP 106
Query: 222 TDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQL-LSHLVLETSLVDMYGKCGDPKSAER 398
D T +L CA+L L G++ H A+R + + + SL+ Y + G AER
Sbjct: 107 -DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAER 165
Query: 399 VFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYAELA 578
VF+ M R++++WN+MV Y NG AL F ++ D + + L A +
Sbjct: 166 VFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLES 225
Query: 579 SLREGMQIHCYTIK 620
+L +G ++H Y I+
Sbjct: 226 ALMQGREVHAYVIR 239
>ref|XP_002465903.1| hypothetical protein SORBIDRAFT_01g047870 [Sorghum bicolor]
gi|241919757|gb|EER92901.1| hypothetical protein
SORBIDRAFT_01g047870 [Sorghum bicolor]
Length = 656
Score = 193 bits (490), Expect = 4e-47
Identities = 95/217 (43%), Positives = 138/217 (63%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR GLE D V TSL+DMY KCG V FA +F M R++V WN +IGGY LN P+ A
Sbjct: 249 IRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAF 308
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
C + M+ D +++T +NLL ACAQ G+S+H + VRR L H+VLET+L++M
Sbjct: 309 DCFMQMR-VDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEM 367
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YGK G +S+E++F ++ + L+SWN M+AAY EA+ LF +L + + PD T
Sbjct: 368 YGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLEL-LNQPLYPDYFT 426
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
+ T++PA+ L S+R+ Q+H Y +KL + +T+I N
Sbjct: 427 MTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMN 463
Score = 137 bits (346), Expect = 2e-30
Identities = 73/215 (33%), Positives = 119/215 (55%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ GL +D SL+ +Y+K G V A R+FD M +R IV+WN ++ GYV N A+
Sbjct: 147 IKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALAL 206
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+C M + ++ D + ++ L AC L+LG+ IHG+A+R L + + TSLVDM
Sbjct: 207 ACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDM 266
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y KCG+ AE VF +M R +++WN M+ YA N +A + F + + + + +T
Sbjct: 267 YCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRV-DGFQVEVVT 325
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
+L A A+ S G +H Y ++ F+ + ++
Sbjct: 326 AINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVL 360
Score = 91.3 bits (225), Expect = 2e-16
Identities = 44/178 (24%), Positives = 98/178 (55%)
Frame = +3
Query: 30 MVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQET 209
+++T+L++MY K G VE + ++F ++ +++V+WN +I Y+ +A++ + +
Sbjct: 359 VLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLN- 417
Query: 210 DKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKS 389
+ D T+ ++PA L + K +H + V+ ++ +++ MY +CG+ +
Sbjct: 418 QPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVA 477
Query: 390 AERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPA 563
+ +F++M G+++ISWN ++ YA +G AL +F ++ P+ T ++L A
Sbjct: 478 SREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKC-SGMEPNESTFVSVLTA 534
Score = 76.3 bits (186), Expect = 8e-12
Identities = 54/193 (27%), Positives = 88/193 (45%)
Frame = +3
Query: 42 SLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQETDKMD 221
SLI + G ++ A F ++ N +I G+ + P+ A++ M +
Sbjct: 59 SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118
Query: 222 TDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKSAERV 401
D T +L CA+ L G++ H ++ L + + SLV +Y K G AERV
Sbjct: 119 -DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERV 177
Query: 402 FNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYAELAS 581
F+ M R+++SWN MV Y NG AL F ++ D++ + L A ++
Sbjct: 178 FDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESA 237
Query: 582 LREGMQIHCYTIK 620
L G +IH Y I+
Sbjct: 238 LALGREIHGYAIR 250
>gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 193 bits (490), Expect = 4e-47
Identities = 95/217 (43%), Positives = 138/217 (63%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR GLE D V TSL+DMY KCG V FA +F M R++V WN +IGGY LN P+ A
Sbjct: 249 IRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAF 308
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
C + M+ D +++T +NLL ACAQ G+S+H + VRR L H+VLET+L++M
Sbjct: 309 DCFMQMR-VDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEM 367
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YGK G +S+E++F ++ + L+SWN M+AAY EA+ LF +L + + PD T
Sbjct: 368 YGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLEL-LNQPLYPDYFT 426
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
+ T++PA+ L S+R+ Q+H Y +KL + +T+I N
Sbjct: 427 MTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMN 463
Score = 137 bits (346), Expect = 2e-30
Identities = 73/215 (33%), Positives = 119/215 (55%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ GL +D SL+ +Y+K G V A R+FD M +R IV+WN ++ GYV N A+
Sbjct: 147 IKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALAL 206
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+C M + ++ D + ++ L AC L+LG+ IHG+A+R L + + TSLVDM
Sbjct: 207 ACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDM 266
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y KCG+ AE VF +M R +++WN M+ YA N +A + F + + + + +T
Sbjct: 267 YCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRV-DGFQVEVVT 325
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
+L A A+ S G +H Y ++ F+ + ++
Sbjct: 326 AINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVL 360
Score = 91.3 bits (225), Expect = 2e-16
Identities = 44/178 (24%), Positives = 98/178 (55%)
Frame = +3
Query: 30 MVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQET 209
+++T+L++MY K G VE + ++F ++ +++V+WN +I Y+ +A++ + +
Sbjct: 359 VLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLN- 417
Query: 210 DKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKS 389
+ D T+ ++PA L + K +H + V+ ++ +++ MY +CG+ +
Sbjct: 418 QPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVA 477
Query: 390 AERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPA 563
+ +F++M G+++ISWN ++ YA +G AL +F ++ P+ T ++L A
Sbjct: 478 SREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKC-SGMEPNESTFVSVLTA 534
Score = 76.3 bits (186), Expect = 8e-12
Identities = 54/193 (27%), Positives = 88/193 (45%)
Frame = +3
Query: 42 SLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQETDKMD 221
SLI + G ++ A F ++ N +I G+ + P+ A++ M +
Sbjct: 59 SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118
Query: 222 TDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKSAERV 401
D T +L CA+ L G++ H ++ L + + SLV +Y K G AERV
Sbjct: 119 -DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERV 177
Query: 402 FNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYAELAS 581
F+ M R+++SWN MV Y NG AL F ++ D++ + L A ++
Sbjct: 178 FDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESA 237
Query: 582 LREGMQIHCYTIK 620
L G +IH Y I+
Sbjct: 238 LALGREIHGYAIR 250
>ref|XP_006649360.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Oryza brachyantha]
Length = 787
Score = 192 bits (488), Expect = 8e-47
Identities = 96/217 (44%), Positives = 140/217 (64%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR +E D V TSL+DMY KCG V A +F T+ R++V WN +IGGY LN P +A
Sbjct: 242 IRHAMEQDVKVGTSLLDMYCKCGEVTSAESVFATVPLRTVVTWNCMIGGYALNERPEEAF 301
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
C + M+ + + D++T +NLL ACAQ G+S+HG+ VRRQ L H+VLET+L++M
Sbjct: 302 DCFMQMR-AEGLQVDVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEM 360
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YGK +S+E++F+++ + LISWN M+AAY EA+ LF +L + + PD T
Sbjct: 361 YGKVSKVESSEKIFSQITNKTLISWNNMIAAYMHKEMYREAIALFLEL-LNQLLYPDYFT 419
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
++T++PA+ L SLR Q+H Y I+L + NT+I N
Sbjct: 420 MSTVVPAFVLLGSLRHCRQMHSYIIRLGYGDNTLIMN 456
Score = 138 bits (347), Expect = 2e-30
Identities = 76/215 (35%), Positives = 113/215 (52%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ GLE D SL+ Y+K G VE A R+FD M R IV WN ++ GYV N A+
Sbjct: 140 IKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNELGALAL 199
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+C M + ++ D + I+ L AC L GK IHG+ +R + + + TSL+DM
Sbjct: 200 ACFQEMHDVLEVQHDSVGIIAALSACCLEFSLRQGKEIHGYVIRHAMEQDVKVGTSLLDM 259
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y KCG+ SAE VF + R +++WN M+ YA N EA + F + E D +T
Sbjct: 260 YCKCGEVTSAESVFATVPLRTVVTWNCMIGGYALNERPEEAFDCFMQM-RAEGLQVDVVT 318
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
+L A A+ S G +H Y ++ F+ + ++
Sbjct: 319 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVL 353
Score = 89.0 bits (219), Expect = 1e-15
Identities = 45/188 (23%), Positives = 101/188 (53%)
Frame = +3
Query: 30 MVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQET 209
+++T+L++MY K VE + ++F ++++++++WN +I Y+ +A++ + +
Sbjct: 352 VLETALLEMYGKVSKVESSEKIFSQITNKTLISWNNMIAAYMHKEMYREAIALFLELLN- 410
Query: 210 DKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKS 389
+ D T+ ++PA L L + +H + +R + ++ +++ MY + GD +
Sbjct: 411 QLLYPDYFTMSTVVPAFVLLGSLRHCRQMHSYIIRLGYGDNTLIMNAVLHMYARSGDVAA 470
Query: 390 AERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYA 569
+ +F++M R++ISWN M+ YA +G AL +F ++ P+ T ++L A +
Sbjct: 471 SREIFDKMVSRDVISWNTMIMGYAIHGQGKTALEMFDEMKY-NGLQPNESTFVSVLTACS 529
Query: 570 ELASLREG 593
+ EG
Sbjct: 530 VSGLVDEG 537
Score = 73.2 bits (178), Expect = 7e-11
Identities = 53/184 (28%), Positives = 82/184 (44%)
Frame = +3
Query: 69 GTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQETDKMDTDMITIVNL 248
G ++ AV F + N +I G+ P A++ M E D T +
Sbjct: 61 GRMDEAVEAFAAVRGPDAFLHNVMIRGFADAGLPADALAGYRAMLEAGARP-DRFTFPVV 119
Query: 249 LPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKSAERVFNRMGGRNL 428
+ CA+L L G++ H ++ L + SLV Y K G + AERVF+ M R++
Sbjct: 120 VKCCARLGSLDEGRAAHTMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDI 179
Query: 429 ISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYAELASLREGMQIHC 608
++WN MV Y N AL F ++ D++ + L A SLR+G +IH
Sbjct: 180 VTWNTMVDGYVSNELGALALACFQEMHDVLEVQHDSVGIIAALSACCLEFSLRQGKEIHG 239
Query: 609 YTIK 620
Y I+
Sbjct: 240 YVIR 243
>ref|XP_004985793.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Setaria italica]
Length = 791
Score = 191 bits (486), Expect = 1e-46
Identities = 98/217 (45%), Positives = 137/217 (63%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
IR GLE D V TSL+DMY KCG V A +F TM R++V WN +IGGY LN P+ A
Sbjct: 245 IRHGLEQDVKVGTSLLDMYCKCGNVVSAEYVFATMPLRTVVTWNCMIGGYALNERPVDAF 304
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
C + M + +++T +NLL ACAQ G+S H + +RR L H+VLET+L+DM
Sbjct: 305 DCFMQMG-AEGFQVEVVTAINLLAACAQTESSLYGRSAHAYVIRRHFLPHVVLETALLDM 363
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
YGK G +S+E+VF+++ + L+SWN M+AAY EA+ LF +L + + PD T
Sbjct: 364 YGKVGKVESSEKVFDQITDKTLVSWNNMIAAYMYKEMYWEAIALFLEL-LNQPLYPDYFT 422
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTIISN 653
+ T++PA+ L SLR+ Q+H Y IKL + NT+I N
Sbjct: 423 MTTVVPAFVLLGSLRQCRQMHSYIIKLGYGDNTLIMN 459
Score = 134 bits (336), Expect = 3e-29
Identities = 76/215 (35%), Positives = 115/215 (53%)
Frame = +3
Query: 3 IRCGLESDPMVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAV 182
I+ GL +D SL+ Y+K G V A R+FD M +R IV+WNAL+ GYV N A+
Sbjct: 143 IKLGLGADVYTGNSLVAFYAKLGLVGDAERVFDGMPARDIVSWNALVDGYVSNGMGALAL 202
Query: 183 SCVINMQETDKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDM 362
+C M + ++ D + ++ L AC L G+ IHG+A+R L + + TSL+DM
Sbjct: 203 ACFQEMNDALQVRRDSVGVIAALVACCLESALVQGREIHGYAIRHGLEQDVKVGTSLLDM 262
Query: 363 YGKCGDPKSAERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAIT 542
Y KCG+ SAE VF M R +++WN M+ YA N +A + F + E + +T
Sbjct: 263 YCKCGNVVSAEYVFATMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMG-AEGFQVEVVT 321
Query: 543 LATILPAYAELASLREGMQIHCYTIKLDFVTNTII 647
+L A A+ S G H Y I+ F+ + ++
Sbjct: 322 AINLLAACAQTESSLYGRSAHAYVIRRHFLPHVVL 356
Score = 95.5 bits (236), Expect = 1e-17
Identities = 45/178 (25%), Positives = 100/178 (56%)
Frame = +3
Query: 30 MVQTSLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQET 209
+++T+L+DMY K G VE + ++FD ++ +++V+WN +I Y+ +A++ + +
Sbjct: 355 VLETALLDMYGKVGKVESSEKVFDQITDKTLVSWNNMIAAYMYKEMYWEAIALFLELLN- 413
Query: 210 DKMDTDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKS 389
+ D T+ ++PA L L + +H + ++ + ++ +++ MY +CG+ +
Sbjct: 414 QPLYPDYFTMTTVVPAFVLLGSLRQCRQMHSYIIKLGYGDNTLIMNAVMHMYARCGNILT 473
Query: 390 AERVFNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPA 563
+ +F++M G+++ISWN ++ YA +G AL +F ++ P+ T ++L A
Sbjct: 474 SREIFDKMPGKDVISWNTIIIGYAIHGQGKTALEMFDEMQC-NGVEPNESTFVSVLTA 530
Score = 73.6 bits (179), Expect = 5e-11
Identities = 53/193 (27%), Positives = 86/193 (44%)
Frame = +3
Query: 42 SLIDMYSKCGTVEFAVRLFDTMSSRSIVAWNALIGGYVLNNHPMKAVSCVINMQETDKMD 221
SL+ + G ++ A F + N +I G+ P A++ M
Sbjct: 55 SLVLSHVAAGRMDDAADAFAAVRGPDAFLHNVMIRGFADAGLPGDALAAYRAMLAAGARP 114
Query: 222 TDMITIVNLLPACAQLRDLSLGKSIHGFAVRRQLLSHLVLETSLVDMYGKCGDPKSAERV 401
D T ++ CA+L L G++ H ++ L + + SLV Y K G AERV
Sbjct: 115 -DRFTFPVVVKCCARLGALGEGRAAHASVIKLGLGADVYTGNSLVAFYAKLGLVGDAERV 173
Query: 402 FNRMGGRNLISWNAMVAAYAQNGWNPEALNLFHDLVIGESRNPDAITLATILPAYAELAS 581
F+ M R+++SWNA+V Y NG AL F ++ D++ + L A ++
Sbjct: 174 FDGMPARDIVSWNALVDGYVSNGMGALALACFQEMNDALQVRRDSVGVIAALVACCLESA 233
Query: 582 LREGMQIHCYTIK 620
L +G +IH Y I+
Sbjct: 234 LVQGREIHGYAIR 246