BLASTX nr result
ID: Akebia24_contig00026985
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00026985
(493 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis] 41 9e-08
ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596... 42 1e-07
emb|CCH50976.1| T4.15 [Malus x robusta] 42 6e-07
gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 40 1e-06
emb|CBL94165.1| putative reverse transcriptase family member [Ma... 39 2e-06
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu... 40 6e-06
gb|AEJ72569.1| putative reverse transcriptase family member [Mal... 39 8e-06
>gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]
Length = 1413
Score = 40.8 bits (94), Expect(2) = 9e-08
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 132 CDKHLLIKLKEKIYKMIVRPTMLYREEY*TIKKSHM 239
CD +LIKLK K Y+ ++RP MLY + IK+ H+
Sbjct: 946 CDAKMLIKLKLKFYRTVIRPAMLYGSKCWAIKRQHI 981
Score = 40.8 bits (94), Expect(2) = 9e-08
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 12/64 (18%)
Frame = +2
Query: 236 YVKKLSIEKMGILR*MNRKTRKDKVR------------IGDKQREN*LR*FRHVQRKLIT 379
++ K+S+ +M +LR M+ +TR D+++ I DK RE LR F HVQR+ +
Sbjct: 980 HISKMSVAEMRMLRWMSGQTRMDRIKNEVIRSKVGVAPIEDKVREGRLRWFGHVQRRPLE 1039
Query: 380 IPIR 391
P+R
Sbjct: 1040 APVR 1043
>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
Length = 278
Score = 42.0 bits (97), Expect(2) = 1e-07
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Frame = +2
Query: 236 YVKKLSIEKMGILR*MNRKTRKDKVR------------IGDKQREN*LR*FRHVQRKLIT 379
+V+K+ + +M +LR M TR DK+R + DK RE LR F HV+R+
Sbjct: 162 HVQKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVRRRCAD 221
Query: 380 IPIR--TNS*VESPKRAK*RFKRNYMETRQEDMNQ 478
P+R VE +R + R K+ + E ++D+ Q
Sbjct: 222 APVRRCEGLVVEGTRRGRGRPKKYWGEVIRQDLAQ 256
Score = 39.7 bits (91), Expect(2) = 1e-07
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 132 CDKHLLIKLKEKIYKMIVRPTMLYREEY*TIKKSHM 239
CDK + +LK K Y+M+VRP +LY E +K SH+
Sbjct: 128 CDKKIPPRLKGKFYRMVVRPALLYGAECWPVKNSHV 163
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 41.6 bits (96), Expect(2) = 6e-07
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Frame = +2
Query: 236 YVKKLSIEKMGILR*MNRKTRKDKVRIGD------------KQREN*LR*FRHVQRKLIT 379
+V K+ + +M +LR M TRKDK+R D K REN LR F HVQR+
Sbjct: 867 HVHKMGVAEMRMLRWMCGHTRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTD 926
Query: 380 IPIRT---NS*VESPKRAK*RFKRNYMETRQEDM 472
PIR + V+ +R + R ++ ET ++D+
Sbjct: 927 APIRRCDYGTEVQG-RRGRGRPRKTLEETLRKDL 959
Score = 37.4 bits (85), Expect(2) = 6e-07
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 132 CDKHLLIKLKEKIYKMIVRPTMLYREEY*TIKKSHM 239
CD+ + +KLK K Y+ +RP MLY E +K H+
Sbjct: 833 CDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHV 868
>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
Length = 868
Score = 39.7 bits (91), Expect(2) = 1e-06
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Frame = +2
Query: 236 YVKKLSIEKMGILR*MNRKTRKDKVR------------IGDKQREN*LR*FRHVQRKLIT 379
+V K+ + +M +LR M TR DK+R + DK RE LR F HV+R+
Sbjct: 575 HVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSAD 634
Query: 380 IPIRTNS--*VESPKRAK*RFKRNYMETRQEDM 472
P+R VE +R + R K+ + E ++D+
Sbjct: 635 APVRRCEVMVVEGTRRGRGRPKKYWEEVIRQDL 667
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 132 CDKHLLIKLKEKIYKMIVRPTMLYREEY*TIKKSHM 239
CDK + KLK K Y+++VRP +LY E +K +H+
Sbjct: 541 CDKKISPKLKGKFYRVVVRPALLYGAECWPVKNAHV 576
>emb|CBL94165.1| putative reverse transcriptase family member [Malus domestica]
Length = 163
Score = 39.3 bits (90), Expect(2) = 2e-06
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Frame = +2
Query: 236 YVKKLSIEKMGILR*MNRKTRKDKV------------RIGDKQREN*LR*FRHVQRKLIT 379
+V K+ + ++ +LR M R TRKDK+ + K REN LR F HVQR
Sbjct: 45 HVHKMGVAEIRMLRGMCRHTRKDKIVNEDIRGKVGVAEVEGKMRENRLRWFGHVQRMPTD 104
Query: 380 IPI-RTNS*VE-SPKRAK*RFKRNYMETRQEDM 472
P+ R N E +R + R ++ ET ++D+
Sbjct: 105 APVRRCNYETEVRGRRGRGRPRKTLEETLRKDL 137
Score = 38.1 bits (87), Expect(2) = 2e-06
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 132 CDKHLLIKLKEKIYKMIVRPTMLYREEY*TIKKSHM 239
CD+ +KLKEK Y+ +RP MLY E +K H+
Sbjct: 11 CDRRRSLKLKEKFYRTAIRPAMLYDIECWAVKHQHV 46
>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
Length = 213
Score = 40.0 bits (92), Expect(2) = 6e-06
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 132 CDKHLLIKLKEKIYKMIVRPTMLYREEY*TIKKSHM 239
CDK + +KLK K Y+++VRP +LY E +K +H+
Sbjct: 73 CDKKIPLKLKGKFYRVVVRPALLYGAECWPVKNAHV 108
Score = 35.4 bits (80), Expect(2) = 6e-06
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
Frame = +2
Query: 236 YVKKLSIEKMGILR*MNRKTRKDKVR------------IGDKQREN*LR*FRHVQRKLIT 379
+V K+ + +M +LR M TR DK+R + DK RE LR F HV+R+
Sbjct: 107 HVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSAD 166
Query: 380 IPIR 391
P+R
Sbjct: 167 APVR 170
>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
Length = 212
Score = 39.3 bits (90), Expect(2) = 8e-06
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Frame = +2
Query: 236 YVKKLSIEKMGILR*MNRKTRKDKVR------------IGDKQREN*LR*FRHVQRKLIT 379
+V K+ + +M +LR M TRKDK+R I REN LR F HVQR+
Sbjct: 93 HVHKMGVAEMRMLRWMCGHTRKDKIRNEDIRGKVGVAEIEGNMRENRLRWFGHVQRRPTY 152
Query: 380 IPIRT---NS*VESPKRAK*RFKRNYMETRQEDM 472
PIR + V+ +R + R ++ ET ++D+
Sbjct: 153 APIRRCDYETEVQG-RRGRGRPRKTLEETLRKDL 185
Score = 35.8 bits (81), Expect(2) = 8e-06
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 132 CDKHLLIKLKEKIYKMIVRPTMLYREEY*TIKKSHM 239
CD+ + +KLK K Y+ +RP MLY E +K H+
Sbjct: 59 CDRCMPLKLKGKFYRTTIRPAMLYGTECWAVKYQHV 94