BLASTX nr result

ID: Akebia24_contig00026552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00026552
         (362 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002438336.1| hypothetical protein SORBIDRAFT_10g012510 [S...    40   4e-06
gb|AHB81588.1| putative transposase [Brassica rapa subsp. pekine...    39   5e-06

>ref|XP_002438336.1| hypothetical protein SORBIDRAFT_10g012510 [Sorghum bicolor]
           gi|241916559|gb|EER89703.1| hypothetical protein
           SORBIDRAFT_10g012510 [Sorghum bicolor]
          Length = 778

 Score = 40.0 bits (92), Expect(2) = 4e-06
 Identities = 22/54 (40%), Positives = 30/54 (55%)
 Frame = +2

Query: 56  IFFLKSECTVGKKKDANYIENFIYFGIEEIGLENVIQFILDNALNYSATNLLLK 217
           + FL+S      KKD  YI   ++  IEEIG++ V+Q + DNA    A   LLK
Sbjct: 285 VCFLESVDCSAVKKDGRYIFELVHRCIEEIGVDKVVQVVTDNARPNEAAASLLK 338



 Score = 36.2 bits (82), Expect(2) = 4e-06
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = +1

Query: 220 KFSNIFKTSCAVHYLDLILENIDELPNVKSILKSAR 327
           K  +IF T CA H +DL+LE+I ++P V + +  A+
Sbjct: 340 KHPSIFWTGCAAHTIDLMLEDIGKMPRVAATISKAK 375


>gb|AHB81588.1| putative transposase [Brassica rapa subsp. pekinensis]
          Length = 612

 Score = 39.3 bits (90), Expect(2) = 5e-06
 Identities = 21/51 (41%), Positives = 28/51 (54%)
 Frame = +2

Query: 62  FLKSECTVGKKKDANYIENFIYFGIEEIGLENVIQFILDNALNYSATNLLL 214
           FLKS       KDAN + N +   ++E+G  NV+Q + DNA NY     LL
Sbjct: 249 FLKSVDVSEVVKDANLLFNMLDNVVDEVGESNVVQLVTDNASNYIKAGKLL 299



 Score = 36.6 bits (83), Expect(2) = 5e-06
 Identities = 14/35 (40%), Positives = 27/35 (77%)
 Frame = +1

Query: 220 KFSNIFKTSCAVHYLDLILENIDELPNVKSILKSA 324
           K  +++ + CA H LDL+LE+I ++P++K+ +KS+
Sbjct: 302 KRPHLYWSPCAAHCLDLMLEDIGQIPSIKAAIKSS 336


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