BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00026444
         (552 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256...   107   3e-21
ref|XP_006428587.1| hypothetical protein CICLE_v10012311mg [Citr...   101   1e-19
gb|EXB38927.1| DNA-directed RNA polymerase III subunit RPC4 [Mor...    91   1e-16
ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209...    91   1e-16
ref|XP_007204524.1| hypothetical protein PRUPE_ppa017748mg [Prun...    90   3e-16
ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4...    90   4e-16
ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600...    85   1e-14
ref|XP_002516293.1| DNA binding protein, putative [Ricinus commu...    85   1e-14
ref|XP_007154594.1| hypothetical protein PHAVU_003G132000g [Phas...    82   1e-13
emb|CBI27823.3| unnamed protein product [Vitis vinifera]               79   6e-13
ref|XP_003550619.1| PREDICTED: uncharacterized protein LOC100802...    77   2e-12
ref|XP_004495578.1| PREDICTED: DNA-directed RNA polymerase III s...    75   8e-12
ref|XP_004239581.1| PREDICTED: uncharacterized protein LOC101251...    75   1e-11
gb|AFK44935.1| unknown [Medicago truncatula]                           73   5e-11
ref|XP_003590974.1| DNA-directed RNA polymerase III subunit RPC4...    73   5e-11
ref|XP_003541303.2| PREDICTED: uncharacterized protein LOC100782...    70   3e-10
ref|XP_004167167.1| PREDICTED: uncharacterized protein LOC101227...    70   3e-10
ref|XP_004146914.1| PREDICTED: uncharacterized protein LOC101207...    70   3e-10
ref|XP_006381642.1| DNA-directed RNA polymerase 3 RPC4 family pr...    65   1e-08
ref|NP_196500.1| RNA polymerase III RPC4 [Arabidopsis thaliana] ...    64   3e-08

>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
          Length = 289

 Score =  107 bits (266), Expect = 3e-21
 Identities = 59/114 (51%), Positives = 75/114 (65%), Gaps = 7/114 (6%)
 Frame = +1

Query: 163 SAPTRKVRFAPKIPSRKATKPAEPKTELLEDAEASQTKNLLRRINEGSGRGKLKGDKKSA 342
           +A TRKVRFAPK P R+  K   PK+E+ ED +A+Q   L+R  NE S +GK K +KK A
Sbjct: 11  AAATRKVRFAPKAP-RRVPKSVVPKSEVAEDDDAAQANELMRHFNEASMKGKPKAEKKLA 69

Query: 343 PVQVAFGHGNASSFIRSYGTPK--SSASRSQDNGK-----ASGQNGEKYYKEPW 483
           P QVAFG+G AS+ IRSYGTP+  +++SR QD         SG +  K YKEPW
Sbjct: 70  PTQVAFGYGGASASIRSYGTPRGATNSSRYQDPASGGGLYGSGLSDHKEYKEPW 123


>ref|XP_006428587.1| hypothetical protein CICLE_v10012311mg [Citrus clementina]
           gi|568853572|ref|XP_006480425.1| PREDICTED:
           uncharacterized protein LOC102622464 [Citrus sinensis]
           gi|557530644|gb|ESR41827.1| hypothetical protein
           CICLE_v10012311mg [Citrus clementina]
          Length = 303

 Score =  101 bits (252), Expect = 1e-19
 Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 15/125 (12%)
 Frame = +1

Query: 154 MEPSAP------TRKVRFAPKIPSRKATKPAEPKTELLEDAEASQTKNLLRRINEGSG-- 309
           MEP  P      TRK+++APK P R+  K AE KTE++E+A+A+Q  +LL+R N   G  
Sbjct: 1   MEPEPPKSTSNATRKIKYAPKAPPRRVPK-AEVKTEMVENADAAQAMDLLQRFNANQGAL 59

Query: 310 RGKLKGDKKSAPVQVAFGHGNASSFIRSYGTPKSSASRSQDNGK-------ASGQNGEKY 468
           +G+ K +KK AP Q+AFG G AS+FI+SYG PK  +S S+  G        ASG    K 
Sbjct: 60  KGRPKVEKKVAPSQIAFGQGGASTFIKSYGIPKGGSSSSRGQGSAVNGGAHASGTRLGKE 119

Query: 469 YKEPW 483
           Y+EPW
Sbjct: 120 YQEPW 124


>gb|EXB38927.1| DNA-directed RNA polymerase III subunit RPC4 [Morus notabilis]
          Length = 328

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 60/142 (42%), Positives = 69/142 (48%), Gaps = 33/142 (23%)
 Frame = +1

Query: 157 EPSAPTRKVRFAPKIPSRKATKPAEPKTELLEDAEASQTKNLLRRINEGSGRGKLKGDKK 336
           EP AP RK RF PK P  +  K AE K E++E+ +A Q + LLRR NEGS R K K +KK
Sbjct: 9   EPDAP-RKRRFMPKAPPSRVPK-AEVKAEVVEETDADQARVLLRRFNEGSTRAKPKVEKK 66

Query: 337 SAPVQVAFGHGNASSFIRSYGTPKSSASRSQ----------------------------- 429
            A  QVAFG+G AS+ IRSYG PK     SQ                             
Sbjct: 67  VAAAQVAFGYGGASNTIRSYGVPKGGYRNSQGPPATRMLFTSAAFLSTVNKSFPMHDIKN 126

Query: 430 ----DNGKASGQNGEKYYKEPW 483
               D    SG   EK YKEPW
Sbjct: 127 HVLTDGAFPSGTRQEKEYKEPW 148


>ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209454 [Cucumis sativus]
           gi|449500539|ref|XP_004161125.1| PREDICTED:
           uncharacterized LOC101209454 [Cucumis sativus]
          Length = 293

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 48/107 (44%), Positives = 67/107 (62%)
 Frame = +1

Query: 163 SAPTRKVRFAPKIPSRKATKPAEPKTELLEDAEASQTKNLLRRINEGSGRGKLKGDKKSA 342
           +A  RK++FAPK P R+  KP E K E+ EDA+A+Q ++LL+R NE + R K +  +K+A
Sbjct: 10  TAAPRKLKFAPKAPVRRIPKP-EVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAA 68

Query: 343 PVQVAFGHGNASSFIRSYGTPKSSASRSQDNGKASGQNGEKYYKEPW 483
           P QVAFG G +SS +RSYG  K+      ++G        K Y EPW
Sbjct: 69  PTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDGTLPAST-SKEYVEPW 114


>ref|XP_007204524.1| hypothetical protein PRUPE_ppa017748mg [Prunus persica]
           gi|462400055|gb|EMJ05723.1| hypothetical protein
           PRUPE_ppa017748mg [Prunus persica]
          Length = 281

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
 Frame = +1

Query: 181 VRFAPKIPSRKATKPAEPKTEL---LEDAEASQTKNLLRRINEGSGRGKLKGDKKSAPVQ 351
           +RF PK P R+  KP E KTE+    E+++A + K LL+R NE S R +LK +KK  P Q
Sbjct: 1   MRFIPKAP-RRVPKP-EVKTEVDHGAEESDAEKAKELLKRFNEQSSRARLKVEKKVVPTQ 58

Query: 352 VAFGHGNASSFIRSYGTPKSSASRSQDNGKASGQNGEKYYKEPW 483
           + FG+G AS+ ++SYG PK  ++ S  N  ASG   EK Y  PW
Sbjct: 59  IVFGYGGASTTMKSYGAPKGGSASSATNAGASGVKEEKEYSSPW 102


>ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4, putative [Theobroma
           cacao] gi|508783039|gb|EOY30295.1| DNA-directed RNA
           polymerase III subunit RPC4, putative [Theobroma cacao]
          Length = 294

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 52/107 (48%), Positives = 69/107 (64%), Gaps = 4/107 (3%)
 Frame = +1

Query: 175 RKVRFAPKIPSRKATKPAEPKTELLEDAEASQTKNLLRRINEGSGRGKLKGDKKSAPVQV 354
           RK+RFAPK P R+A K  E KTE++ED +A Q ++LL+R+N+ S + K K +KK A  QV
Sbjct: 12  RKMRFAPKAPPRQAPK-LEVKTEVVEDTDAVQARDLLQRLNQTSAKTKPKVEKKVASSQV 70

Query: 355 AFGHGNASSFIRSYGTPK--SSASRSQDNG--KASGQNGEKYYKEPW 483
           AFGHG AS+ ++ +G  K  S  SR   NG     G   EK Y+EPW
Sbjct: 71  AFGHGGASASMKLFGVSKGASRTSRETLNGVVHTPGLREEKEYREPW 117


>ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600766 [Solanum tuberosum]
          Length = 283

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
 Frame = +1

Query: 148 DLMEPSAPTRKVRFAPKIPSRKATKPAEPKTELLE-DAEASQTKNLLRRINEGSGRGKLK 324
           D     AP RKVRFAPK P R+A K   PK E +E D +A++ + L++R NE S + K K
Sbjct: 4   DSFATKAP-RKVRFAPKGPPRRAQKTVLPKPENVEADGDAAKAEELMQRFNEASAKVKHK 62

Query: 325 GDKKSAPVQVAFGHGNASSFIRSYGTPKSSASRSQDNGKASGQNGEKYYKEPW 483
            +KK  P QVAFG+G +SS ++SYG   +  S S  +G   G+  +K Y EPW
Sbjct: 63  VEKKG-PTQVAFGYGGSSSSLKSYG-HYNKVSGSMSDGGIGGERVQKEYTEPW 113


>ref|XP_002516293.1| DNA binding protein, putative [Ricinus communis]
           gi|223544779|gb|EEF46295.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 286

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
 Frame = +1

Query: 160 PSAPTRKVRFAPKIPSRKATKPAEPKTELLEDAEASQTKNLLRRINEGSGRGKLKGDKKS 339
           P  P RK+++ PK P R+  KP E K+E  ED +A+Q   L+++  E S R K K +KK 
Sbjct: 6   PQDPPRKLKYMPKAPPRRPPKP-EVKSEKAEDEDATQAMKLMKQFQERSMRAKPKAEKKV 64

Query: 340 APVQVAFGHGNASSFIRSYGTPKSSASRSQDNGKA------SGQNGEKYYKEPW 483
              Q+AFG G AS  I+SY  PK  A+ + + G +      S + GEK Y EPW
Sbjct: 65  QASQIAFGFGAASPSIKSYAAPKVGAAVNHNQGSSVNGGAYSSELGEKEYIEPW 118


>ref|XP_007154594.1| hypothetical protein PHAVU_003G132000g [Phaseolus vulgaris]
           gi|593783109|ref|XP_007154595.1| hypothetical protein
           PHAVU_003G132000g [Phaseolus vulgaris]
           gi|561027948|gb|ESW26588.1| hypothetical protein
           PHAVU_003G132000g [Phaseolus vulgaris]
           gi|561027949|gb|ESW26589.1| hypothetical protein
           PHAVU_003G132000g [Phaseolus vulgaris]
          Length = 291

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
 Frame = +1

Query: 157 EPSAPTR-KVRFAPKIPSRKATKPAEPKTELLEDAEA--SQTKNLLRRINEGSGRGKLKG 327
           EPSAP R K +FAP+ P R   K  E K E++EDA+A  +Q K+LLRR NE + + + K 
Sbjct: 4   EPSAPVRRKHKFAPRAPPRVVPKK-EVKAEVVEDAQADANQAKDLLRRFNESAMKARNKV 62

Query: 328 DKKSAPVQVAFGHGNASSFIRSYGTPKSSASRSQDNGKASGQNGEKYYKEPW 483
           +KK +  Q+AFG+G  S+ ++SYG  +   + + +    S    EK Y EPW
Sbjct: 63  EKKVSASQIAFGYGGESTSLKSYGIGRGGRNVNINPNSTSSAVAEKEYTEPW 114


>emb|CBI27823.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 52/124 (41%), Positives = 68/124 (54%), Gaps = 17/124 (13%)
 Frame = +1

Query: 163 SAPTRKVRFAPKIPSRKATKPAEPKTELLEDAEASQTKNLLRRINEGSGRGKLK------ 324
           +A TRKVRFAPK P R+  K   PK+E+ ED +A+Q   L+R  N      ++       
Sbjct: 11  AAATRKVRFAPKAP-RRVPKSVVPKSEVAEDDDAAQANELMRHFNVFILWRRIIFYFFIF 69

Query: 325 ----GDKKSAPVQVAFGHGNASSFIRSYGTPK--SSASRSQDNGK-----ASGQNGEKYY 471
                    AP QVAFG+G AS+ IRSYGTP+  +++SR QD         SG +  K Y
Sbjct: 70  FLFCSHNCMAPTQVAFGYGGASASIRSYGTPRGATNSSRYQDPASGGGLYGSGLSDHKEY 129

Query: 472 KEPW 483
           KEPW
Sbjct: 130 KEPW 133


>ref|XP_003550619.1| PREDICTED: uncharacterized protein LOC100802173 [Glycine max]
          Length = 298

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
 Frame = +1

Query: 160 PSAPTRKVRFAPKIPSRKATKPAEPKTELLEDAEASQT--KNLLRRINEGSG--RGKLKG 327
           P  P RK +F P+ P R+  K  E K E+++DA+A Q   +NLL+R NE     + K K 
Sbjct: 10  PGVP-RKPKFKPRAPPRRVIKQ-EVKAEVVDDADAEQAAKENLLKRFNERESAMKAKYKV 67

Query: 328 DKKSAPVQVAFGHGNASSFIRSYGTPKSSASRSQDNGKASGQNGEKYYKEPW 483
           +KK    Q+AFG+G  S+ ++SYG P+  +S + +   AS    EK Y+EPW
Sbjct: 68  EKKVLASQIAFGYGGESTSMKSYGIPRGGSSININLSSASSGGKEKEYQEPW 119


>ref|XP_004495578.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like [Cicer
           arietinum]
          Length = 298

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 47/112 (41%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
 Frame = +1

Query: 157 EPSAPTRKVRFAPKIPSRKATKPAEPKTELLED---AEASQTKNLLRRINEGSGRGKLKG 327
           +P AP RKV+FAPK   RK  K  E K+E+ E+     A+  K LLRR NE + + ++K 
Sbjct: 8   KPPAP-RKVKFAPKALPRKVPK-IEVKSEVAEEDNATAAADAKELLRRFNENAMKARMKV 65

Query: 328 DKKSAPVQVAFGHGNASSFIRSYGTPKSSASRSQDNGKASGQNGEKYYKEPW 483
           +KK +  Q+AFG G  S   +SY  PKS +  S     A     EK Y+EPW
Sbjct: 66  EKKVSASQIAFGFGGESVSRKSYNIPKSESKTSFGENLAFNGVKEKEYQEPW 117


>ref|XP_004239581.1| PREDICTED: uncharacterized protein LOC101251476 [Solanum
           lycopersicum]
          Length = 103

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 47/99 (47%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
 Frame = +1

Query: 148 DLMEPSAPTRKVRFAPKIPSRKATKPAEPKTELLE-DAEASQTKNLLRRINEGSGRGKLK 324
           D     AP RKVRFAPK P R+A K   PKTE +E D +A++ + L++R NE S + K K
Sbjct: 5   DSFATKAP-RKVRFAPKGPPRRAQKTVLPKTENVEADVDAAKAEELMQRFNEASAKIKHK 63

Query: 325 GDKKSAPVQVAFGHGNASSFIRSYGTPKSSASRSQDNGK 441
            +KK  P QVAFG+G +SS ++SYG   +  S S  +GK
Sbjct: 64  VEKK-GPTQVAFGYGGSSSSLKSYG-HYTKVSGSMSDGK 100


>gb|AFK44935.1| unknown [Medicago truncatula]
          Length = 288

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
 Frame = +1

Query: 148 DLMEPSAPT--RKVRFAPKIPSRKATKPAEPKTELLEDAEASQTK---NLLRRINEGSGR 312
           DL   S P   RK++F PK P R+  K  E K+E++E+     +K   +LL+R NE +  
Sbjct: 2   DLNNDSKPPQRRKLKFQPKAPPRRVPK-VEVKSEVIEEDNKDVSKVTMDLLQRHNENAMN 60

Query: 313 GKLKGDKKSAPVQVAFGHGNASSFIRSYGTPKSSASRSQDNGKASGQNGEKYYKEPW 483
            ++K +KK  P Q+AFG G  S++++SYGT   S S   +N    G   EK YKEPW
Sbjct: 61  RRMKHEKKVLPSQIAFGAGGQSTYLKSYGTKGGSKS---ENSAFYGVT-EKEYKEPW 113


>ref|XP_003590974.1| DNA-directed RNA polymerase III subunit RPC4 [Medicago truncatula]
           gi|355480022|gb|AES61225.1| DNA-directed RNA polymerase
           III subunit RPC4 [Medicago truncatula]
          Length = 288

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
 Frame = +1

Query: 148 DLMEPSAPT--RKVRFAPKIPSRKATKPAEPKTELLEDAEASQTK---NLLRRINEGSGR 312
           DL   S P   RK++F PK P R+  K  E K+E++E+     +K   +LL+R NE +  
Sbjct: 2   DLNNDSKPPQRRKLKFQPKAPPRRVPK-VEVKSEVIEEDNKDVSKVTMDLLQRHNENAMN 60

Query: 313 GKLKGDKKSAPVQVAFGHGNASSFIRSYGTPKSSASRSQDNGKASGQNGEKYYKEPW 483
            ++K +KK  P Q+AFG G  S++++SYGT   S S   +N    G   EK YKEPW
Sbjct: 61  RRMKHEKKVLPSQIAFGAGGQSTYLKSYGTKGGSKS---ENSAFYGVT-EKEYKEPW 113


>ref|XP_003541303.2| PREDICTED: uncharacterized protein LOC100782982 [Glycine max]
          Length = 318

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 41/111 (36%), Positives = 63/111 (56%), Gaps = 8/111 (7%)
 Frame = +1

Query: 175 RKVRFAPKIPSRKATKPAEPKTELLED------AEASQTKNLLRRINEGSG--RGKLKGD 330
           RK++F P+ P R+  K  E K E+ +D      AE +  +NLL+R +E     + K K +
Sbjct: 14  RKLKFKPRAPPRRVIKQ-EVKAEVADDVDVDADAEHAAKENLLKRFHERESAVKAKYKVE 72

Query: 331 KKSAPVQVAFGHGNASSFIRSYGTPKSSASRSQDNGKASGQNGEKYYKEPW 483
           KK    Q+AFG+G  S+ ++SYG P+  +S + +   AS    EK Y+EPW
Sbjct: 73  KKVLASQIAFGYGGESTSMKSYGIPRGGSSININQSSASNGAKEKEYQEPW 123


>ref|XP_004167167.1| PREDICTED: uncharacterized protein LOC101227599 [Cucumis sativus]
          Length = 322

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 47/99 (47%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
 Frame = +1

Query: 157 EPSAPTRKVRFAPKIPSRKATKPAEPKTELLEDAE----ASQTKNLLRRINEGSGRGKLK 324
           +PS P RKV+FAPK   RK  +P  P  +  ED +     +QT+ LLRR NE  G+   K
Sbjct: 5   DPSPPRRKVKFAPKSSQRK--RPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANK 62

Query: 325 GDKKSAPVQVAFGHG--NASSFIRSYGTPK-SSASRSQD 432
            +KKS+ VQVAFG G  + SS IR+YG PK  + SR  D
Sbjct: 63  VEKKSS-VQVAFGPGAESTSSSIRTYGVPKVENGSRKND 100


>ref|XP_004146914.1| PREDICTED: uncharacterized protein LOC101207602 [Cucumis sativus]
          Length = 334

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 47/99 (47%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
 Frame = +1

Query: 157 EPSAPTRKVRFAPKIPSRKATKPAEPKTELLEDAE----ASQTKNLLRRINEGSGRGKLK 324
           +PS P RKV+FAPK   RK  +P  P  +  ED +     +QT+ LLRR NE  G+   K
Sbjct: 5   DPSPPRRKVKFAPKSSQRK--RPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANK 62

Query: 325 GDKKSAPVQVAFGHG--NASSFIRSYGTPK-SSASRSQD 432
            +KKS+ VQVAFG G  + SS IR+YG PK  + SR  D
Sbjct: 63  VEKKSS-VQVAFGPGAESTSSSIRTYGVPKVENGSRKND 100


>ref|XP_006381642.1| DNA-directed RNA polymerase 3 RPC4 family protein [Populus
           trichocarpa] gi|550336350|gb|ERP59439.1| DNA-directed
           RNA polymerase 3 RPC4 family protein [Populus
           trichocarpa]
          Length = 292

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
 Frame = +1

Query: 160 PSAPTRKVRFAPKIPSRKATKPAEPKTELLEDAEASQTKNLLRRINEGSGRGKLKGDKKS 339
           P    RK RF PK P R+  KP E KTE +E+ +  Q  NL+++  E S + K+  +KK 
Sbjct: 6   PQDAQRKYRFMPKAPPRRVPKP-EVKTEKVENVDTLQAMNLMKQFQERSLKQKITNEKKV 64

Query: 340 APVQVAFGHGNASSF-IRSYGT-PKSSASRSQDNGKASGQNGEKYYKEPW 483
             + +AFG G A++    S+ T  +   S S  N  A G   EK Y EPW
Sbjct: 65  QKLDIAFGPGAAATKPFPSWSTINRDQGSSSNGNADAPGPR-EKEYIEPW 113


>ref|NP_196500.1| RNA polymerase III RPC4 [Arabidopsis thaliana]
           gi|9955525|emb|CAC05464.1| putative protein [Arabidopsis
           thaliana] gi|332004001|gb|AED91384.1| RNA polymerase III
           RPC4 [Arabidopsis thaliana]
          Length = 272

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
 Frame = +1

Query: 154 MEPSAPTRKVRFAPKIPSRKATKPAEPKTELLED-AEASQTKNLLRRINEGSGRGKLKGD 330
           ME   P RK++FAPK P ++  KP E K E++ED + ++Q   LLRR+NE S R K K D
Sbjct: 1   MEQKPPVRKMKFAPKAPPKRVPKP-EVKPEVVEDNSNSAQASELLRRVNERSLR-KPKAD 58

Query: 331 KKSAPVQVAFGHGNASSFIRSYGTPKSSASRSQDNGK-ASGQNGEKYYKEPW 483
           KK    QVA+  G  +S        +S+   ++ NG   S    E  YKEPW
Sbjct: 59  KKVPASQVAWLGGVVNS-------TRSNKYLNRSNGAYGSTSTQEIEYKEPW 103